Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:21:20 (3998944): wrapper (7.7.26015): starting
12:21:20 (3998944): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 12:21:20] Arguments: --nthreads 8
[2025-05-24 12:21:20] Threads: 8
[2025-05-24 12:21:20] Checking for CVMFS
[2025-05-24 12:21:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 12:21:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 12:21:21] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 12:21:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 12:21:21] 2.12.6.0 1723263 7938 247684 146373 0 443 29079063 40960000 34730 16776704 0 94963248 99.685 77523554 39030 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 12:21:21] CVMFS is ok
[2025-05-24 12:21:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 12:21:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 12:21:22] Further information can be found at the LHC@home message board.
[2025-05-24 12:21:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 12:21:22] Checking for apptainer binary...
[2025-05-24 12:21:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 12:21:22] Running /usr/bin/apptainer --version
[2025-05-24 12:21:22] apptainer version 1.4.1-1.el9
[2025-05-24 12:21:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 12:21:22] c8-16-2.aglt2.org
[2025-05-24 12:21:22] apptainer works
[2025-05-24 12:21:22] Set ATHENA_PROC_NUMBER=8
[2025-05-24 12:21:22] Set ATHENA_CORE_NUMBER=8
[2025-05-24 12:21:22] Starting ATLAS job with PandaID=6665381052
[2025-05-24 12:21:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 14:23:17]  *** The last 200 lines of the pilot log: ***
[2025-05-24 14:23:17] 2025-05-24 18:22:59,353 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 14:23:17] 2025-05-24 18:22:59,353 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 14:23:17] 2025-05-24 18:22:59,353 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 14:23:17] 2025-05-24 18:22:59,353 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 14:23:17] 2025-05-24 18:22:59,354 | INFO     | fitting pss+swap vs Time
[2025-05-24 14:23:17] 2025-05-24 18:22:59,354 | INFO     | sum of square deviations: 471543428.2956526
[2025-05-24 14:23:17] 2025-05-24 18:22:59,355 | INFO     | sum of deviations: 37946303915.634766
[2025-05-24 14:23:17] 2025-05-24 18:22:59,355 | INFO     | mean x: 1748107404.078261
[2025-05-24 14:23:17] 2025-05-24 18:22:59,355 | INFO     | mean y: 2406226.3739130436
[2025-05-24 14:23:17] 2025-05-24 18:22:59,355 | INFO     | -- intersect: -140672260944.96924
[2025-05-24 14:23:17] 2025-05-24 18:22:59,355 | INFO     | intersect: -140672260944.96924
[2025-05-24 14:23:17] 2025-05-24 18:22:59,355 | INFO     | chi2: 4.482349835522329
[2025-05-24 14:23:17] 2025-05-24 18:22:59,355 | INFO     | sum of square deviations: 412670650.76363593
[2025-05-24 14:23:17] 2025-05-24 18:22:59,355 | INFO     | sum of deviations: 36470741213.70909
[2025-05-24 14:23:17] 2025-05-24 18:22:59,392 | INFO     | mean x: 1748107251.581818
[2025-05-24 14:23:17] 2025-05-24 18:22:59,392 | INFO     | mean y: 2402400.2545454544
[2025-05-24 14:23:17] 2025-05-24 18:22:59,392 | INFO     | -- intersect: -154490695347.96732
[2025-05-24 14:23:17] 2025-05-24 18:22:59,392 | INFO     | intersect: -154490695347.96732
[2025-05-24 14:23:17] 2025-05-24 18:22:59,392 | INFO     | chi2: 4.493851054707112
[2025-05-24 14:23:17] 2025-05-24 18:22:59,392 | INFO     | current chi2=4.493851054707112 (change=-0.25658905723147235 %)
[2025-05-24 14:23:17] 2025-05-24 18:22:59,392 | INFO     | right removable region: 109
[2025-05-24 14:23:17] 2025-05-24 18:22:59,392 | INFO     | sum of square deviations: 412665160.76363593
[2025-05-24 14:23:17] 2025-05-24 18:22:59,392 | INFO     | sum of deviations: 3292755435.527273
[2025-05-24 14:23:17] 2025-05-24 18:22:59,392 | INFO     | mean x: 1748107556.581818
[2025-05-24 14:23:17] 2025-05-24 18:22:59,392 | INFO     | mean y: 2495653.6636363636
[2025-05-24 14:23:17] 2025-05-24 18:22:59,392 | INFO     | -- intersect: -13946078653.33492
[2025-05-24 14:23:17] 2025-05-24 18:22:59,392 | INFO     | intersect: -13946078653.33492
[2025-05-24 14:23:17] 2025-05-24 18:22:59,393 | INFO     | chi2: 0.5316641333065636
[2025-05-24 14:23:17] 2025-05-24 18:22:59,393 | INFO     | current chi2=0.5316641333065636 (change=88.13871846652485 %)
[2025-05-24 14:23:17] 2025-05-24 18:22:59,393 | INFO     | sum of square deviations: 358903268.2285719
[2025-05-24 14:23:17] 2025-05-24 18:22:59,393 | INFO     | sum of deviations: -6864551497.885716
[2025-05-24 14:23:17] 2025-05-24 18:22:59,393 | INFO     | mean x: 1748107709.0857143
[2025-05-24 14:23:17] 2025-05-24 18:22:59,393 | INFO     | mean y: 2523923.2095238096
[2025-05-24 14:23:17] 2025-05-24 18:22:59,393 | INFO     | -- intersect: 33437648245.419872
[2025-05-24 14:23:17] 2025-05-24 18:22:59,393 | INFO     | intersect: 33437648245.419872
[2025-05-24 14:23:17] 2025-05-24 18:22:59,393 | INFO     | chi2: 0.023519213317835203
[2025-05-24 14:23:17] 2025-05-24 18:22:59,393 | INFO     | current chi2=0.023519213317835203 (change=95.57630243523052 %)
[2025-05-24 14:23:17] 2025-05-24 18:22:59,393 | INFO     | sum of square deviations: 310031592.3600001
[2025-05-24 14:23:17] 2025-05-24 18:22:59,394 | INFO     | sum of deviations: -6848546892.060001
[2025-05-24 14:23:17] 2025-05-24 18:22:59,394 | INFO     | mean x: 1748107861.58
[2025-05-24 14:23:17] 2025-05-24 18:22:59,394 | INFO     | mean y: 2523851.57
[2025-05-24 14:23:17] 2025-05-24 18:22:59,394 | INFO     | -- intersect: 38617939046.12157
[2025-05-24 14:23:17] 2025-05-24 18:22:59,394 | INFO     | intersect: 38617939046.12157
[2025-05-24 14:23:17] 2025-05-24 18:22:59,394 | INFO     | chi2: 0.02024861313895812
[2025-05-24 14:23:17] 2025-05-24 18:22:59,394 | INFO     | current chi2=0.02024861313895812 (change=13.90607812718338 %)
[2025-05-24 14:23:17] 2025-05-24 18:22:59,394 | INFO     | left removable region: 30
[2025-05-24 14:23:17] 2025-05-24 18:22:59,394 | INFO     | sum of square deviations: 152850876.6835443
[2025-05-24 14:23:17] 2025-05-24 18:22:59,394 | INFO     | sum of deviations: -4365079677.670887
[2025-05-24 14:23:17] 2025-05-24 18:22:59,394 | INFO     | mean x: 1748108136.063291
[2025-05-24 14:23:17] 2025-05-24 18:22:59,394 | INFO     | mean y: 2517549.734177215
[2025-05-24 14:23:17] 2025-05-24 18:22:59,394 | INFO     | -- intersect: 49924581882.404816
[2025-05-24 14:23:17] 2025-05-24 18:22:59,394 | INFO     | intersect: 49924581882.404816
[2025-05-24 14:23:17] 2025-05-24 18:22:59,394 | INFO     | chi2: 0.01742931748576155
[2025-05-24 14:23:17] 2025-05-24 18:22:59,394 | INFO     | -- intersect: 49924581882.404816
[2025-05-24 14:23:17] 2025-05-24 18:22:59,394 | INFO     | current memory leak: -28.56 B/s (using 79 data points, chi2=0.02)
[2025-05-24 14:23:17] 2025-05-24 18:22:59,395 | INFO     | ..............................
[2025-05-24 14:23:17] 2025-05-24 18:22:59,395 | INFO     | . Timing measurements:
[2025-05-24 14:23:17] 2025-05-24 18:22:59,395 | INFO     | . get job = 0 s
[2025-05-24 14:23:17] 2025-05-24 18:22:59,395 | INFO     | . initial setup = 5 s
[2025-05-24 14:23:17] 2025-05-24 18:22:59,395 | INFO     | . payload setup = 68 s
[2025-05-24 14:23:17] 2025-05-24 18:22:59,395 | INFO     | . stage-in = 0 s
[2025-05-24 14:23:17] 2025-05-24 18:22:59,395 | INFO     | . payload execution = 7049 s
[2025-05-24 14:23:17] 2025-05-24 18:22:59,395 | INFO     | . stage-out = 1 s
[2025-05-24 14:23:17] 2025-05-24 18:22:59,395 | INFO     | . log creation = 0 s
[2025-05-24 14:23:17] 2025-05-24 18:22:59,395 | INFO     | ..............................
[2025-05-24 14:23:17] 2025-05-24 18:22:59,629 | INFO     | 
[2025-05-24 14:23:17] 2025-05-24 18:22:59,629 | INFO     | job summary report
[2025-05-24 14:23:17] 2025-05-24 18:22:59,629 | INFO     | --------------------------------------------------
[2025-05-24 14:23:17] 2025-05-24 18:22:59,629 | INFO     | PanDA job id: 6665381052
[2025-05-24 14:23:17] 2025-05-24 18:22:59,629 | INFO     | task id: 44871837
[2025-05-24 14:23:17] 2025-05-24 18:22:59,629 | INFO     | errors: (none)
[2025-05-24 14:23:17] 2025-05-24 18:22:59,629 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 14:23:17] 2025-05-24 18:22:59,629 | INFO     | pilot state: finished 
[2025-05-24 14:23:17] 2025-05-24 18:22:59,629 | INFO     | transexitcode: 0
[2025-05-24 14:23:17] 2025-05-24 18:22:59,629 | INFO     | exeerrorcode: 0
[2025-05-24 14:23:17] 2025-05-24 18:22:59,629 | INFO     | exeerrordiag: 
[2025-05-24 14:23:17] 2025-05-24 18:22:59,629 | INFO     | exitcode: 0
[2025-05-24 14:23:17] 2025-05-24 18:22:59,629 | INFO     | exitmsg: OK
[2025-05-24 14:23:17] 2025-05-24 18:22:59,630 | INFO     | cpuconsumptiontime: 28150 s
[2025-05-24 14:23:17] 2025-05-24 18:22:59,630 | INFO     | nevents: 400
[2025-05-24 14:23:17] 2025-05-24 18:22:59,630 | INFO     | neventsw: 0
[2025-05-24 14:23:17] 2025-05-24 18:22:59,630 | INFO     | pid: 4063622
[2025-05-24 14:23:17] 2025-05-24 18:22:59,630 | INFO     | pgrp: 4063622
[2025-05-24 14:23:17] 2025-05-24 18:22:59,630 | INFO     | corecount: 8
[2025-05-24 14:23:17] 2025-05-24 18:22:59,630 | INFO     | event service: False
[2025-05-24 14:23:17] 2025-05-24 18:22:59,630 | INFO     | sizes: {0: 2392911, 1: 2393767, 2: 2393767, 12: 2393795, 23: 2393823, 34: 2393851, 35: 2394213, 45: 2394241, 7122: 2421229, 7126: 2430170, 7128: 2430226, 7158: 243
[2025-05-24 14:23:17] 2025-05-24 18:22:59,630 | INFO     | --------------------------------------------------
[2025-05-24 14:23:17] 2025-05-24 18:22:59,630 | INFO     | 
[2025-05-24 14:23:17] 2025-05-24 18:22:59,630 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-05-24 14:23:17] 2025-05-24 18:22:59,755 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 14:23:17] 2025-05-24 18:22:59,755 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 14:23:17] 2025-05-24 18:22:59,755 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 14:23:17] 2025-05-24 18:22:59,755 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 14:23:17] 2025-05-24 18:22:59,755 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 14:23:17] 2025-05-24 18:22:59,755 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 14:23:17] 2025-05-24 18:22:59,755 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 14:23:17] 2025-05-24 18:22:59,755 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 14:23:17] 2025-05-24 18:22:59,766 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 14:23:17] 2025-05-24 18:22:59,766 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 14:23:17] 2025-05-24 18:22:59,766 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 14:23:17] 2025-05-24 18:22:59,766 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 14:23:17] 2025-05-24 18:22:59,766 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 14:23:17] 2025-05-24 18:22:59,766 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 14:23:17] 2025-05-24 18:22:59,767 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 14:23:17] 2025-05-24 18:22:59,767 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 14:23:17] 2025-05-24 18:22:59,767 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 14:23:17] 2025-05-24 18:22:59,767 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 14:23:17] 2025-05-24 18:22:59,767 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 14:23:17] 2025-05-24 18:22:59,767 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 14:23:17] 2025-05-24 18:22:59,767 | INFO     | job 6665381052 has completed (purged errors)
[2025-05-24 14:23:17] 2025-05-24 18:22:59,767 | INFO     | overall cleanup function is called
[2025-05-24 14:23:17] 2025-05-24 18:23:00,372 | INFO     | PID=4019635 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-24 14:23:17] 2025-05-24 18:23:00,387 | INFO     | .. there are 85 such processes running
[2025-05-24 14:23:17] 2025-05-24 18:23:00,793 | INFO     | --- collectZombieJob: --- 10, [4063622]
[2025-05-24 14:23:17] 2025-05-24 18:23:00,793 | INFO     | zombie collector waiting for pid 4063622
[2025-05-24 14:23:17] 2025-05-24 18:23:00,793 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 14:23:17] 2025-05-24 18:23:00,793 | INFO     | collected zombie processes
[2025-05-24 14:23:17] 2025-05-24 18:23:00,793 | INFO     | will attempt to kill all subprocesses of pid=4063622
[2025-05-24 14:23:17] 2025-05-24 18:23:02,816 | INFO     | process IDs to be killed: [4063622] (in reverse order)
[2025-05-24 14:23:17] 2025-05-24 18:23:03,692 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 14:23:17] 2025-05-24 18:23:03,692 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 14:23:17] 2025-05-24 18:23:03,920 | INFO     | did not find any defunct processes belonging to 4063622
[2025-05-24 14:23:17] 2025-05-24 18:23:04,086 | INFO     | did not find any defunct processes belonging to 4063622
[2025-05-24 14:23:17] 2025-05-24 18:23:04,087 | INFO     | ready for new job
[2025-05-24 14:23:17] 2025-05-24 18:23:04,087 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 14:23:17] 2025-05-24 18:23:04,105 | INFO     | **************************************
[2025-05-24 14:23:17] 2025-05-24 18:23:04,106 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 14:23:17] 2025-05-24 18:23:04,106 | INFO     | **************************************
[2025-05-24 14:23:17] 2025-05-24 18:23:04,106 | INFO     | 
[2025-05-24 14:23:17] 2025-05-24 18:23:04,139 | INFO     | architecture information:
[2025-05-24 14:23:17] 2025-05-24 18:23:04,144 | INFO     | executing command: cat /etc/os-release
[2025-05-24 14:23:17] 2025-05-24 18:23:04,342 | INFO     | cat /etc/os-release:
[2025-05-24 14:23:17] NAME="CentOS Linux"
[2025-05-24 14:23:17] VERSION="7 (Core)"
[2025-05-24 14:23:17] ID="centos"
[2025-05-24 14:23:17] ID_LIKE="rhel fedora"
[2025-05-24 14:23:17] VERSION_ID="7"
[2025-05-24 14:23:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 14:23:17] ANSI_COLOR="0;31"
[2025-05-24 14:23:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 14:23:17] HOME_URL="https://www.centos.org/"
[2025-05-24 14:23:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 14:23:17] 
[2025-05-24 14:23:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 14:23:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 14:23:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 14:23:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 14:23:17] 
[2025-05-24 14:23:17] 2025-05-24 18:23:04,344 | INFO     | **************************************
[2025-05-24 14:23:17] 2025-05-24 18:23:04,848 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-05-24 14:23:17] 2025-05-24 18:23:04,960 | INFO     | sufficient remaining disk space (169983606784 B)
[2025-05-24 14:23:17] 2025-05-24 18:23:04,960 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 14:23:17] 2025-05-24 18:23:04,960 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 14:23:17] 2025-05-24 18:23:04,960 | INFO     | update_server=False
[2025-05-24 14:23:17] 2025-05-24 18:23:04,960 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 14:23:17] 2025-05-24 18:23:04,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 14:23:17] 2025-05-24 18:23:04,961 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 14:23:17] 2025-05-24 18:23:04,961 | INFO     | aborting loop
[2025-05-24 14:23:17] 2025-05-24 18:23:04,961 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 14:23:17] 2025-05-24 18:23:04,961 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 14:23:17] 2025-05-24 18:23:04,961 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 14:23:17] 2025-05-24 18:23:04,961 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 14:23:17] 2025-05-24 18:23:05,192 | INFO     | all job control threads have been joined
[2025-05-24 14:23:17] 2025-05-24 18:23:05,966 | INFO     | [job] retrieve thread has finished
[2025-05-24 14:23:17] 2025-05-24 18:23:05,966 | INFO     | [job] queue monitor thread has finished
[2025-05-24 14:23:17] 2025-05-24 18:23:05,967 | INFO     | [job] job monitor thread has finished
[2025-05-24 14:23:17] 2025-05-24 18:23:05,986 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 14:23:17] 2025-05-24 18:23:06,027 | INFO     | all data control threads have been joined
[2025-05-24 14:23:17] 2025-05-24 18:23:06,199 | INFO     | [job] control thread has finished
[2025-05-24 14:23:17] 2025-05-24 18:23:06,230 | INFO     | all payload control threads have been joined
[2025-05-24 14:23:17] 2025-05-24 18:23:06,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 14:23:17] 2025-05-24 18:23:06,270 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 14:23:17] 2025-05-24 18:23:06,489 | INFO     | [job] validate thread has finished
[2025-05-24 14:23:17] 2025-05-24 18:23:06,651 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 14:23:17] 2025-05-24 18:23:06,731 | INFO     | [payload] failed_post thread has finished
[2025-05-24 14:23:17] 2025-05-24 18:23:07,035 | INFO     | [data] control thread has finished
[2025-05-24 14:23:17] 2025-05-24 18:23:07,121 | INFO     | [data] copytool_in thread has finished
[2025-05-24 14:23:17] 2025-05-24 18:23:07,121 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 14:23:17] 2025-05-24 18:23:07,237 | INFO     | [payload] control thread has finished
[2025-05-24 14:23:17] 2025-05-24 18:23:07,307 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 14:23:17] 2025-05-24 18:23:07,558 | INFO     | [payload] validate_post thread has finished
[2025-05-24 14:23:17] 2025-05-24 18:23:08,272 | INFO     | [data] copytool_out thread has finished
[2025-05-24 14:23:17] 2025-05-24 18:23:11,328 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 14:23:17] 2025-05-24 18:23:11,558 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139914695198528)>', '<ExcThread(monitor, started 139914029020928)>']
[2025-05-24 14:23:17] 2025-05-24 18:23:12,010 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 14:23:17] 2025-05-24 18:23:12,011 | INFO     | [monitor] control thread has ended
[2025-05-24 14:23:17] 2025-05-24 18:23:16,590 | INFO     | all workflow threads have been joined
[2025-05-24 14:23:17] 2025-05-24 18:23:16,590 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 14:23:17] 2025-05-24 18:23:16,590 | INFO     | traces error code: 0
[2025-05-24 14:23:17] 2025-05-24 18:23:16,590 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 14:23:17] 2025-05-24 18:23:16,746 [wrapper] ==== pilot stdout END ====
[2025-05-24 14:23:17] 2025-05-24 18:23:16,756 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 14:23:17] 2025-05-24 18:23:16,785 [wrapper] pilotpid: 4019635
[2025-05-24 14:23:17] 2025-05-24 18:23:16,798 [wrapper] Pilot exit status: 0
[2025-05-24 14:23:17] 2025-05-24 18:23:16,925 [wrapper] pandaids: 6665381052
[2025-05-24 14:23:17] 2025-05-24 18:23:17,230 [wrapper] cleanup supervisor_pilot 1570416 4019636
[2025-05-24 14:23:17] 2025-05-24 18:23:17,242 [wrapper] Test setup, not cleaning
[2025-05-24 14:23:17] 2025-05-24 18:23:17,258 [wrapper] apfmon messages muted
[2025-05-24 14:23:17] 2025-05-24 18:23:17,262 [wrapper] ==== wrapper stdout END ====
[2025-05-24 14:23:17] 2025-05-24 18:23:17,282 [wrapper] ==== wrapper stderr END ====
[2025-05-24 14:23:17]  *** Error codes and diagnostics ***
[2025-05-24 14:23:17]     "exeErrorCode": 0,
[2025-05-24 14:23:17]     "exeErrorDiag": "",
[2025-05-24 14:23:17]     "pilotErrorCode": 0,
[2025-05-24 14:23:17]     "pilotErrorDiag": "",
[2025-05-24 14:23:17]  *** Listing of results directory ***
[2025-05-24 14:23:17] total 421136
[2025-05-24 14:23:17] -rw-r--r--. 1 boincer umatlas    495897 May 24 06:42 pilot3.tar.gz
[2025-05-24 14:23:17] -rw-r--r--. 1 boincer umatlas      5111 May 24 06:52 queuedata.json
[2025-05-24 14:23:17] -rwx------. 1 boincer umatlas     37140 May 24 06:53 runpilot2-wrapper.sh
[2025-05-24 14:23:17] -rw-r--r--. 1 boincer umatlas       100 May 24 12:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 14:23:17] -rwxr-xr-x. 1 boincer umatlas      7986 May 24 12:21 run_atlas
[2025-05-24 14:23:17] -rw-r--r--. 1 boincer umatlas       105 May 24 12:21 job.xml
[2025-05-24 14:23:17] -rw-r--r--. 2 boincer umatlas 228296708 May 24 12:21 EVNT.44871834._000638.pool.root.1
[2025-05-24 14:23:17] -rw-r--r--. 2 boincer umatlas     15093 May 24 12:21 start_atlas.sh
[2025-05-24 14:23:17] drwxrwx--x. 2 boincer umatlas      4096 May 24 12:21 shared
[2025-05-24 14:23:17] -rw-r--r--. 2 boincer umatlas    508881 May 24 12:21 input.tar.gz
[2025-05-24 14:23:17] -rw-r--r--. 1 boincer umatlas         0 May 24 12:21 boinc_lockfile
[2025-05-24 14:23:17] -rw-r--r--. 1 boincer umatlas      2558 May 24 12:21 pandaJob.out
[2025-05-24 14:23:17] -rw-------. 1 boincer umatlas    988572 May 24 12:22 agis_schedconf.cvmfs.json
[2025-05-24 14:23:17] -rw-------. 1 boincer umatlas   1596740 May 24 12:22 agis_ddmendpoints.agis.ALL.json
[2025-05-24 14:23:17] drwx------. 4 boincer umatlas      4096 May 24 12:22 pilot3
[2025-05-24 14:23:17] -rw-------. 1 boincer umatlas 197292837 May 24 14:21 HITS.44871837._015953.pool.root.1
[2025-05-24 14:23:17] -rw-r--r--. 1 boincer umatlas       529 May 24 14:21 boinc_task_state.xml
[2025-05-24 14:23:17] -rw-r--r--. 1 boincer umatlas      7160 May 24 14:21 init_data.xml
[2025-05-24 14:23:17] -rw-------. 1 boincer umatlas      1033 May 24 14:22 memory_monitor_summary.json
[2025-05-24 14:23:17] -rw-------. 1 boincer umatlas        95 May 24 14:22 pilot_heartbeat.json
[2025-05-24 14:23:17] -rw-------. 1 boincer umatlas    335218 May 24 14:22 log.44871837._015953.job.log.tgz.1
[2025-05-24 14:23:17] -rw-------. 1 boincer umatlas      7691 May 24 14:22 heartbeat.json
[2025-05-24 14:23:17] -rw-r--r--. 1 boincer umatlas      8192 May 24 14:23 boinc_mmap_file
[2025-05-24 14:23:17] -rw-r--r--. 1 boincer umatlas        27 May 24 14:23 wrapper_checkpoint.txt
[2025-05-24 14:23:17] -rw-------. 1 boincer umatlas      4477 May 24 14:23 pilotlog.txt
[2025-05-24 14:23:17] -rw-------. 1 boincer umatlas    574734 May 24 14:23 log.44871837._015953.job.log.1
[2025-05-24 14:23:17] -rw-------. 1 boincer umatlas       357 May 24 14:23 output.list
[2025-05-24 14:23:17] -rw-r--r--. 1 boincer umatlas       620 May 24 14:23 runtime_log
[2025-05-24 14:23:17] -rw-------. 1 boincer umatlas    931840 May 24 14:23 result.tar.gz
[2025-05-24 14:23:17] -rw-r--r--. 1 boincer umatlas      8654 May 24 14:23 runtime_log.err
[2025-05-24 14:23:17] -rw-------. 1 boincer umatlas       651 May 24 14:23 m65NDmfg1c7n9Rq4apOajLDm4fhM0noT9bVof3QYDmabMKDmNLrRQm.diag
[2025-05-24 14:23:17] -rw-r--r--. 1 boincer umatlas     21048 May 24 14:23 stderr.txt
[2025-05-24 14:23:17] HITS file was successfully produced:
[2025-05-24 14:23:17] -rw-------. 1 boincer umatlas 197292837 May 24 14:21 shared/HITS.pool.root.1
[2025-05-24 14:23:17]  *** Contents of shared directory: ***
[2025-05-24 14:23:17] total 417052
[2025-05-24 14:23:17] -rw-r--r--. 2 boincer umatlas 228296708 May 24 12:21 ATLAS.root_0
[2025-05-24 14:23:17] -rw-r--r--. 2 boincer umatlas     15093 May 24 12:21 start_atlas.sh
[2025-05-24 14:23:17] -rw-r--r--. 2 boincer umatlas    508881 May 24 12:21 input.tar.gz
[2025-05-24 14:23:17] -rw-------. 1 boincer umatlas 197292837 May 24 14:21 HITS.pool.root.1
[2025-05-24 14:23:17] -rw-------. 1 boincer umatlas    931840 May 24 14:23 result.tar.gz
14:23:19 (3998944): run_atlas exited; CPU time 28373.487520
14:23:19 (3998944): called boinc_finish(0)

</stderr_txt>
]]>

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