Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:11:49 (3624562): wrapper (7.7.26015): starting
12:11:49 (3624562): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 12:11:49] Arguments: --nthreads 8
[2025-05-24 12:11:49] Threads: 8
[2025-05-24 12:11:49] Checking for CVMFS
[2025-05-24 12:11:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 12:11:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 12:11:50] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 12:11:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 12:11:52] 2.12.6.0 7692 21690 285996 146372 1 868 39644979 40960000 39491 16776704 0 253032822 99.749 165920842 34088 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 12:11:52] CVMFS is ok
[2025-05-24 12:11:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 12:11:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 12:11:52] Further information can be found at the LHC@home message board.
[2025-05-24 12:11:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 12:11:52] Checking for apptainer binary...
[2025-05-24 12:11:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 12:11:52] Running /usr/bin/apptainer --version
[2025-05-24 12:11:52] apptainer version 1.4.1-1.el9
[2025-05-24 12:11:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 12:11:53] c8-7-4.aglt2.org
[2025-05-24 12:11:53] apptainer works
[2025-05-24 12:11:53] Set ATHENA_PROC_NUMBER=8
[2025-05-24 12:11:53] Set ATHENA_CORE_NUMBER=8
[2025-05-24 12:11:53] Starting ATLAS job with PandaID=6665283784
[2025-05-24 12:11:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 15:43:15]  *** The last 200 lines of the pilot log: ***
[2025-05-24 15:43:15] 2025-05-24 19:42:29,247 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 15:43:15] 2025-05-24 19:42:31,750 | INFO     | monitor loop #646: job 0:6665283784 is in state 'finished'
[2025-05-24 15:43:15] 2025-05-24 19:42:31,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 15:43:15] 2025-05-24 19:42:34,254 | INFO     | monitor loop #647: job 0:6665283784 is in state 'finished'
[2025-05-24 15:43:15] 2025-05-24 19:42:34,254 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 15:43:15] 2025-05-24 19:42:35,688 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-24 15:43:15] 2025-05-24 19:42:35,689 | INFO     | using path: /tmp/boinchome/slots/14/PanDA_Pilot-6665283784/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 15:43:15] 2025-05-24 19:42:35,692 | INFO     | extracted standard info from prmon json
[2025-05-24 15:43:15] 2025-05-24 19:42:35,692 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 15:43:15] 2025-05-24 19:42:35,692 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 15:43:15] 2025-05-24 19:42:35,692 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 15:43:15] 2025-05-24 19:42:35,692 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 15:43:15] 2025-05-24 19:42:35,695 | INFO     | fitting pss+swap vs Time
[2025-05-24 15:43:15] 2025-05-24 19:42:35,695 | INFO     | sum of square deviations: 2480681630.59499
[2025-05-24 15:43:15] 2025-05-24 19:42:35,695 | INFO     | sum of deviations: 63305508158.71999
[2025-05-24 15:43:15] 2025-05-24 19:42:35,696 | INFO     | mean x: 1748109643.795
[2025-05-24 15:43:15] 2025-05-24 19:42:35,696 | INFO     | mean y: 2413449.92
[2025-05-24 15:43:15] 2025-05-24 19:42:35,696 | INFO     | -- intersect: -44608296748.73559
[2025-05-24 15:43:15] 2025-05-24 19:42:35,696 | INFO     | intersect: -44608296748.73559
[2025-05-24 15:43:15] 2025-05-24 19:42:35,696 | INFO     | chi2: 4.607130491056507
[2025-05-24 15:43:15] 2025-05-24 19:42:35,696 | INFO     | sum of square deviations: 2299251586.7487054
[2025-05-24 15:43:15] 2025-05-24 19:42:35,697 | INFO     | sum of deviations: 73534726070.55891
[2025-05-24 15:43:15] 2025-05-24 19:42:35,697 | INFO     | mean x: 1748109491.297436
[2025-05-24 15:43:15] 2025-05-24 19:42:35,697 | INFO     | mean y: 2421836.317948718
[2025-05-24 15:43:15] 2025-05-24 19:42:35,697 | INFO     | -- intersect: -55905662918.19763
[2025-05-24 15:43:15] 2025-05-24 19:42:35,697 | INFO     | intersect: -55905662918.19763
[2025-05-24 15:43:15] 2025-05-24 19:42:35,698 | INFO     | chi2: 3.9498923141821796
[2025-05-24 15:43:15] 2025-05-24 19:42:35,698 | INFO     | current chi2=3.9498923141821796 (change=14.265673137545749 %)
[2025-05-24 15:43:15] 2025-05-24 19:42:35,698 | INFO     | right removable region: 194
[2025-05-24 15:43:15] 2025-05-24 19:42:35,698 | INFO     | sum of square deviations: 2299227675.148725
[2025-05-24 15:43:15] 2025-05-24 19:42:35,699 | INFO     | sum of deviations: 2837117734.9282055
[2025-05-24 15:43:15] 2025-05-24 19:42:35,699 | INFO     | mean x: 1748109796.3025641
[2025-05-24 15:43:15] 2025-05-24 19:42:35,699 | INFO     | mean y: 2464162.543589744
[2025-05-24 15:43:15] 2025-05-24 19:42:35,699 | INFO     | -- intersect: -2154605082.6197577
[2025-05-24 15:43:15] 2025-05-24 19:42:35,699 | INFO     | intersect: -2154605082.6197577
[2025-05-24 15:43:15] 2025-05-24 19:42:35,699 | INFO     | chi2: 0.9395284174363425
[2025-05-24 15:43:15] 2025-05-24 19:42:35,699 | INFO     | current chi2=0.9395284174363425 (change=79.60708038853726 %)
[2025-05-24 15:43:15] 2025-05-24 19:42:35,699 | INFO     | sum of square deviations: 2126843657.1789525
[2025-05-24 15:43:15] 2025-05-24 19:42:35,700 | INFO     | sum of deviations: -11989460835.852633
[2025-05-24 15:43:15] 2025-05-24 19:42:35,700 | INFO     | mean x: 1748109948.8105264
[2025-05-24 15:43:15] 2025-05-24 19:42:35,700 | INFO     | mean y: 2477219.2263157894
[2025-05-24 15:43:15] 2025-05-24 19:42:35,700 | INFO     | -- intersect: 9856937229.619396
[2025-05-24 15:43:15] 2025-05-24 19:42:35,700 | INFO     | intersect: 9856937229.619396
[2025-05-24 15:43:15] 2025-05-24 19:42:35,700 | INFO     | chi2: 0.710712308953603
[2025-05-24 15:43:15] 2025-05-24 19:42:35,700 | INFO     | current chi2=0.710712308953603 (change=24.354357381451194 %)
[2025-05-24 15:43:15] 2025-05-24 19:42:35,700 | INFO     | left removable region: 20
[2025-05-24 15:43:15] 2025-05-24 19:42:35,701 | INFO     | sum of square deviations: 1633510485.477008
[2025-05-24 15:43:15] 2025-05-24 19:42:35,701 | INFO     | sum of deviations: -1774148358.385057
[2025-05-24 15:43:15] 2025-05-24 19:42:35,701 | INFO     | mean x: 1748110070.821839
[2025-05-24 15:43:15] 2025-05-24 19:42:35,701 | INFO     | mean y: 2488966.8908045976
[2025-05-24 15:43:15] 2025-05-24 19:42:35,701 | INFO     | -- intersect: 1901103417.1796236
[2025-05-24 15:43:15] 2025-05-24 19:42:35,701 | INFO     | intersect: 1901103417.1796236
[2025-05-24 15:43:15] 2025-05-24 19:42:35,701 | INFO     | chi2: 0.006279736243467078
[2025-05-24 15:43:15] 2025-05-24 19:42:35,701 | INFO     | -- intersect: 1901103417.1796236
[2025-05-24 15:43:15] 2025-05-24 19:42:35,701 | INFO     | current memory leak: -1.09 B/s (using 174 data points, chi2=0.01)
[2025-05-24 15:43:15] 2025-05-24 19:42:35,702 | INFO     | ..............................
[2025-05-24 15:43:15] 2025-05-24 19:42:35,702 | INFO     | . Timing measurements:
[2025-05-24 15:43:15] 2025-05-24 19:42:35,702 | INFO     | . get job = 0 s
[2025-05-24 15:43:15] 2025-05-24 19:42:35,702 | INFO     | . initial setup = 7 s
[2025-05-24 15:43:15] 2025-05-24 19:42:35,702 | INFO     | . payload setup = 131 s
[2025-05-24 15:43:15] 2025-05-24 19:42:35,702 | INFO     | . stage-in = 0 s
[2025-05-24 15:43:15] 2025-05-24 19:42:35,702 | INFO     | . payload execution = 12227 s
[2025-05-24 15:43:15] 2025-05-24 19:42:35,702 | INFO     | . stage-out = 2 s
[2025-05-24 15:43:15] 2025-05-24 19:42:35,702 | INFO     | . log creation = 0 s
[2025-05-24 15:43:15] 2025-05-24 19:42:35,702 | INFO     | ..............................
[2025-05-24 15:43:15] 2025-05-24 19:42:35,914 | INFO     | 
[2025-05-24 15:43:15] 2025-05-24 19:42:35,914 | INFO     | job summary report
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | --------------------------------------------------
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | PanDA job id: 6665283784
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | task id: 44871837
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | errors: (none)
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | pilot state: finished 
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | transexitcode: 0
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | exeerrorcode: 0
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | exeerrordiag: 
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | exitcode: 0
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | exitmsg: OK
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | cpuconsumptiontime: 29537 s
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | nevents: 400
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | neventsw: 0
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | pid: 3924254
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | pgrp: 3924254
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | corecount: 8
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | event service: False
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | sizes: {0: 2392911, 1: 2393597, 2: 2393597, 3: 2393824, 14: 2393824, 25: 2393852, 35: 2394008, 46: 2394036, 57: 2394064, 65: 2394298, 68: 2394326, 12362: 2423638, 
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | --------------------------------------------------
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | 
[2025-05-24 15:43:15] 2025-05-24 19:42:35,915 | INFO     | executing command: ls -lF /tmp/boinchome/slots/14
[2025-05-24 15:43:15] 2025-05-24 19:42:35,986 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 15:43:15] 2025-05-24 19:42:35,986 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 15:43:15] 2025-05-24 19:42:35,986 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 15:43:15] 2025-05-24 19:42:35,986 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 15:43:15] 2025-05-24 19:42:35,986 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 15:43:15] 2025-05-24 19:42:35,986 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 15:43:15] 2025-05-24 19:42:35,986 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 15:43:15] 2025-05-24 19:42:35,986 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 15:43:15] 2025-05-24 19:42:35,986 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 15:43:15] 2025-05-24 19:42:35,986 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 15:43:15] 2025-05-24 19:42:35,986 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 15:43:15] 2025-05-24 19:42:35,986 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 15:43:15] 2025-05-24 19:42:35,986 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 15:43:15] 2025-05-24 19:42:35,986 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 15:43:15] 2025-05-24 19:42:35,986 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 15:43:15] 2025-05-24 19:42:35,986 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 15:43:15] 2025-05-24 19:42:35,986 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 15:43:15] 2025-05-24 19:42:35,986 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 15:43:15] 2025-05-24 19:42:35,986 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 15:43:15] 2025-05-24 19:42:35,986 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 15:43:15] 2025-05-24 19:42:35,987 | INFO     | job 6665283784 has completed (purged errors)
[2025-05-24 15:43:15] 2025-05-24 19:42:35,987 | INFO     | overall cleanup function is called
[2025-05-24 15:43:15] 2025-05-24 19:42:36,090 | INFO     | PID=3705285 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-05-24 15:43:15] 2025-05-24 19:42:36,090 | INFO     | .. there are 103 such processes running
[2025-05-24 15:43:15] 2025-05-24 19:42:36,995 | INFO     | --- collectZombieJob: --- 10, [3924254]
[2025-05-24 15:43:15] 2025-05-24 19:42:36,995 | INFO     | zombie collector waiting for pid 3924254
[2025-05-24 15:43:15] 2025-05-24 19:42:36,995 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 15:43:15] 2025-05-24 19:42:36,995 | INFO     | collected zombie processes
[2025-05-24 15:43:15] 2025-05-24 19:42:36,995 | INFO     | will attempt to kill all subprocesses of pid=3924254
[2025-05-24 15:43:15] 2025-05-24 19:42:37,737 | INFO     | process IDs to be killed: [3924254] (in reverse order)
[2025-05-24 15:43:15] 2025-05-24 19:42:38,170 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 15:43:15] 2025-05-24 19:42:38,170 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 15:43:15] 2025-05-24 19:42:38,204 | INFO     | did not find any defunct processes belonging to 3924254
[2025-05-24 15:43:15] 2025-05-24 19:42:38,237 | INFO     | did not find any defunct processes belonging to 3924254
[2025-05-24 15:43:15] 2025-05-24 19:42:38,238 | INFO     | ready for new job
[2025-05-24 15:43:15] 2025-05-24 19:42:38,238 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 15:43:15] 2025-05-24 19:42:38,239 | INFO     | **************************************
[2025-05-24 15:43:15] 2025-05-24 19:42:38,239 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 15:43:15] 2025-05-24 19:42:38,239 | INFO     | **************************************
[2025-05-24 15:43:15] 2025-05-24 19:42:38,239 | INFO     | 
[2025-05-24 15:43:15] 2025-05-24 19:42:38,243 | INFO     | architecture information:
[2025-05-24 15:43:15] 2025-05-24 19:42:38,244 | INFO     | executing command: cat /etc/os-release
[2025-05-24 15:43:15] 2025-05-24 19:42:38,266 | INFO     | cat /etc/os-release:
[2025-05-24 15:43:15] NAME="CentOS Linux"
[2025-05-24 15:43:15] VERSION="7 (Core)"
[2025-05-24 15:43:15] ID="centos"
[2025-05-24 15:43:15] ID_LIKE="rhel fedora"
[2025-05-24 15:43:15] VERSION_ID="7"
[2025-05-24 15:43:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 15:43:15] ANSI_COLOR="0;31"
[2025-05-24 15:43:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 15:43:15] HOME_URL="https://www.centos.org/"
[2025-05-24 15:43:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 15:43:15] 
[2025-05-24 15:43:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 15:43:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 15:43:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 15:43:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 15:43:15] 
[2025-05-24 15:43:15] 2025-05-24 19:42:38,267 | INFO     | **************************************
[2025-05-24 15:43:15] 2025-05-24 19:42:38,770 | INFO     | executing command: df -mP /tmp/boinchome/slots/14
[2025-05-24 15:43:15] 2025-05-24 19:42:38,791 | INFO     | sufficient remaining disk space (169475047424 B)
[2025-05-24 15:43:15] 2025-05-24 19:42:38,791 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 15:43:15] 2025-05-24 19:42:38,792 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 15:43:15] 2025-05-24 19:42:38,792 | INFO     | update_server=False
[2025-05-24 15:43:15] 2025-05-24 19:42:38,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 15:43:15] 2025-05-24 19:42:38,793 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 15:43:15] 2025-05-24 19:42:38,793 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 15:43:15] 2025-05-24 19:42:38,793 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 15:43:15] 2025-05-24 19:42:38,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 15:43:15] 2025-05-24 19:42:38,794 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 15:43:15] 2025-05-24 19:42:38,794 | INFO     | aborting loop
[2025-05-24 15:43:15] 2025-05-24 19:42:38,797 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 15:43:15] 2025-05-24 19:42:38,881 | INFO     | all data control threads have been joined
[2025-05-24 15:43:15] 2025-05-24 19:42:39,385 | INFO     | all job control threads have been joined
[2025-05-24 15:43:15] 2025-05-24 19:42:39,582 | INFO     | all payload control threads have been joined
[2025-05-24 15:43:15] 2025-05-24 19:42:39,800 | INFO     | [job] retrieve thread has finished
[2025-05-24 15:43:15] 2025-05-24 19:42:39,800 | INFO     | [job] job monitor thread has finished
[2025-05-24 15:43:15] 2025-05-24 19:42:39,887 | INFO     | [data] control thread has finished
[2025-05-24 15:43:15] 2025-05-24 19:42:39,920 | INFO     | [payload] validate_post thread has finished
[2025-05-24 15:43:15] 2025-05-24 19:42:40,032 | INFO     | [payload] failed_post thread has finished
[2025-05-24 15:43:15] 2025-05-24 19:42:40,080 | INFO     | [data] copytool_in thread has finished
[2025-05-24 15:43:15] 2025-05-24 19:42:40,238 | INFO     | [job] validate thread has finished
[2025-05-24 15:43:15] 2025-05-24 19:42:40,254 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 15:43:15] 2025-05-24 19:42:40,391 | INFO     | [job] control thread has finished
[2025-05-24 15:43:15] 2025-05-24 19:42:40,562 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 15:43:15] 2025-05-24 19:42:40,589 | INFO     | [payload] control thread has finished
[2025-05-24 15:43:15] 2025-05-24 19:42:40,652 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 15:43:15] 2025-05-24 19:42:40,775 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 15:43:15] 2025-05-24 19:42:40,804 | INFO     | [data] copytool_out thread has finished
[2025-05-24 15:43:15] 2025-05-24 19:42:41,176 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 15:43:15] 2025-05-24 19:42:41,306 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 15:43:15] 2025-05-24 19:42:41,780 | INFO     | [job] queue monitor thread has finished
[2025-05-24 15:43:15] 2025-05-24 19:42:44,667 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 15:43:15] 2025-05-24 19:42:46,345 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139720496490304)>', '<ExcThread(monitor, started 139720143120128)>']
[2025-05-24 15:43:15] 2025-05-24 19:42:46,845 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 15:43:15] 2025-05-24 19:42:46,845 | INFO     | [monitor] control thread has ended
[2025-05-24 15:43:15] 2025-05-24 19:42:51,370 | INFO     | all workflow threads have been joined
[2025-05-24 15:43:15] 2025-05-24 19:42:51,370 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 15:43:15] 2025-05-24 19:42:51,370 | INFO     | traces error code: 0
[2025-05-24 15:43:15] 2025-05-24 19:42:51,370 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 15:43:15] 2025-05-24 19:42:51,528 [wrapper] ==== pilot stdout END ====
[2025-05-24 15:43:15] 2025-05-24 19:42:51,533 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 15:43:15] 2025-05-24 19:42:51,537 [wrapper] pilotpid: 3705285
[2025-05-24 15:43:15] 2025-05-24 19:42:51,539 [wrapper] Pilot exit status: 0
[2025-05-24 15:43:15] 2025-05-24 19:42:51,552 [wrapper] pandaids: 6665283784
[2025-05-24 15:43:15] 2025-05-24 19:42:51,724 [wrapper] cleanup supervisor_pilot 4157046 3705286
[2025-05-24 15:43:15] 2025-05-24 19:42:51,727 [wrapper] Test setup, not cleaning
[2025-05-24 15:43:15] 2025-05-24 19:42:51,729 [wrapper] apfmon messages muted
[2025-05-24 15:43:15] 2025-05-24 19:42:51,733 [wrapper] ==== wrapper stdout END ====
[2025-05-24 15:43:15] 2025-05-24 19:42:51,736 [wrapper] ==== wrapper stderr END ====
[2025-05-24 15:43:15]  *** Error codes and diagnostics ***
[2025-05-24 15:43:15]     "exeErrorCode": 0,
[2025-05-24 15:43:15]     "exeErrorDiag": "",
[2025-05-24 15:43:15]     "pilotErrorCode": 0,
[2025-05-24 15:43:15]     "pilotErrorDiag": "",
[2025-05-24 15:43:15]  *** Listing of results directory ***
[2025-05-24 15:43:15] total 419456
[2025-05-24 15:43:15] -rw-r--r--. 1 boincer umatlas    495897 May 24 03:50 pilot3.tar.gz
[2025-05-24 15:43:15] -rw-r--r--. 1 boincer umatlas      5111 May 24 03:52 queuedata.json
[2025-05-24 15:43:15] -rwx------. 1 boincer umatlas     37140 May 24 03:52 runpilot2-wrapper.sh
[2025-05-24 15:43:15] -rw-r--r--. 1 boincer umatlas       100 May 24 12:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 15:43:15] -rwxr-xr-x. 1 boincer umatlas      7986 May 24 12:11 run_atlas
[2025-05-24 15:43:15] -rw-r--r--. 1 boincer umatlas       105 May 24 12:11 job.xml
[2025-05-24 15:43:15] -rw-r--r--. 2 boincer umatlas 222689138 May 24 12:11 EVNT.44871834._000441.pool.root.1
[2025-05-24 15:43:15] -rw-r--r--. 2 boincer umatlas     15093 May 24 12:11 start_atlas.sh
[2025-05-24 15:43:15] drwxrwx--x. 2 boincer umatlas      4096 May 24 12:11 shared
[2025-05-24 15:43:15] -rw-r--r--. 2 boincer umatlas    508878 May 24 12:11 input.tar.gz
[2025-05-24 15:43:15] -rw-r--r--. 1 boincer umatlas         0 May 24 12:11 boinc_lockfile
[2025-05-24 15:43:15] -rw-r--r--. 1 boincer umatlas      2558 May 24 12:11 pandaJob.out
[2025-05-24 15:43:15] -rw-------. 1 boincer umatlas    988548 May 24 12:13 agis_schedconf.cvmfs.json
[2025-05-24 15:43:15] drwx------. 4 boincer umatlas      4096 May 24 12:14 pilot3
[2025-05-24 15:43:15] -rw-r--r--. 1 boincer umatlas      7161 May 24 15:40 init_data.xml
[2025-05-24 15:43:15] -rw-------. 1 boincer umatlas 200543065 May 24 15:41 HITS.44871837._011004.pool.root.1
[2025-05-24 15:43:15] -rw-r--r--. 1 boincer umatlas       529 May 24 15:41 boinc_task_state.xml
[2025-05-24 15:43:15] -rw-------. 1 boincer umatlas        95 May 24 15:41 pilot_heartbeat.json
[2025-05-24 15:43:15] -rw-------. 1 boincer umatlas      1034 May 24 15:42 memory_monitor_summary.json
[2025-05-24 15:43:15] -rw-------. 1 boincer umatlas   1596740 May 24 15:42 agis_ddmendpoints.agis.ALL.json
[2025-05-24 15:43:15] -rw-------. 1 boincer umatlas    351757 May 24 15:42 log.44871837._011004.job.log.tgz.1
[2025-05-24 15:43:15] -rw-------. 1 boincer umatlas      7694 May 24 15:42 heartbeat.json
[2025-05-24 15:43:15] -rw-------. 1 boincer umatlas      4478 May 24 15:42 pilotlog.txt
[2025-05-24 15:43:15] -rw-------. 1 boincer umatlas    879929 May 24 15:42 log.44871837._011004.job.log.1
[2025-05-24 15:43:15] -rw-------. 1 boincer umatlas       357 May 24 15:42 output.list
[2025-05-24 15:43:15] -rw-r--r--. 1 boincer umatlas       620 May 24 15:42 runtime_log
[2025-05-24 15:43:15] -rw-------. 1 boincer umatlas   1249280 May 24 15:42 result.tar.gz
[2025-05-24 15:43:15] -rw-r--r--. 1 boincer umatlas      8664 May 24 15:42 runtime_log.err
[2025-05-24 15:43:15] -rw-------. 1 boincer umatlas       652 May 24 15:42 I2UNDmZryc7n9Rq4apOajLDm4fhM0noT9bVof3QYDm57LKDmPNC2Zm.diag
[2025-05-24 15:43:15] -rw-r--r--. 1 boincer umatlas      8192 May 24 15:43 boinc_mmap_file
[2025-05-24 15:43:15] -rw-r--r--. 1 boincer umatlas        27 May 24 15:43 wrapper_checkpoint.txt
[2025-05-24 15:43:15] -rw-r--r--. 1 boincer umatlas     21300 May 24 15:43 stderr.txt
[2025-05-24 15:43:15] HITS file was successfully produced:
[2025-05-24 15:43:15] -rw-------. 1 boincer umatlas 200543065 May 24 15:41 shared/HITS.pool.root.1
[2025-05-24 15:43:15]  *** Contents of shared directory: ***
[2025-05-24 15:43:15] total 415060
[2025-05-24 15:43:15] -rw-r--r--. 2 boincer umatlas 222689138 May 24 12:11 ATLAS.root_0
[2025-05-24 15:43:15] -rw-r--r--. 2 boincer umatlas     15093 May 24 12:11 start_atlas.sh
[2025-05-24 15:43:15] -rw-r--r--. 2 boincer umatlas    508878 May 24 12:11 input.tar.gz
[2025-05-24 15:43:15] -rw-------. 1 boincer umatlas 200543065 May 24 15:41 HITS.pool.root.1
[2025-05-24 15:43:15] -rw-------. 1 boincer umatlas   1249280 May 24 15:42 result.tar.gz
15:43:17 (3624562): run_atlas exited; CPU time 30001.432525
15:43:17 (3624562): called boinc_finish(0)

</stderr_txt>
]]>

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