Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-24 16:39:42 (53896): Detected: vboxwrapper 26206
2025-05-24 16:39:42 (53896): Detected: BOINC client v8.0.2
2025-05-24 16:39:43 (53896): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-05-24 16:39:43 (53896): Successfully copied 'init_data.xml' to the shared directory.
2025-05-24 16:39:44 (53896): Create VM. (boinc_aeb710a48ac2e188, slot#0)
2025-05-24 16:39:44 (53896): Setting Memory Size for VM. (4800MB)
2025-05-24 16:39:45 (53896): Setting CPU Count for VM. (8)
2025-05-24 16:39:45 (53896): Setting Chipset Options for VM.
2025-05-24 16:39:45 (53896): Setting Graphics Controller Options for VM.
2025-05-24 16:39:45 (53896): Setting Boot Options for VM.
2025-05-24 16:39:46 (53896): Setting Network Configuration for NAT.
2025-05-24 16:39:46 (53896): Enabling VM Network Access.
2025-05-24 16:39:46 (53896): Disabling USB Support for VM.
2025-05-24 16:39:46 (53896): Disabling COM Port Support for VM.
2025-05-24 16:39:47 (53896): Disabling LPT Port Support for VM.
2025-05-24 16:39:47 (53896): Disabling Audio Support for VM.
2025-05-24 16:39:47 (53896): Disabling Clipboard Support for VM.
2025-05-24 16:39:47 (53896): Disabling Drag and Drop Support for VM.
2025-05-24 16:39:48 (53896): Adding storage controller(s) to VM.
2025-05-24 16:39:48 (53896): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-24 16:39:51 (53896): Adding VirtualBox Guest Additions to VM.
2025-05-24 16:39:51 (53896): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-24 16:39:51 (53896): forwarding host port 49187 to guest port 80
2025-05-24 16:39:52 (53896): Enabling remote desktop for VM.
2025-05-24 16:39:52 (53896): Required extension pack not installed, remote desktop not enabled.
2025-05-24 16:39:52 (53896): Enabling shared directory for VM.
2025-05-24 16:39:52 (53896): Starting VM using VBoxManage interface. (boinc_aeb710a48ac2e188, slot#0)
2025-05-24 16:39:57 (53896): Successfully started VM. (PID = '22928')
2025-05-24 16:39:57 (53896): Reporting VM Process ID to BOINC.
2025-05-24 16:39:57 (53896): Guest Log: BIOS: VirtualBox 7.1.4
2025-05-24 16:39:57 (53896): Guest Log: CPUID EDX: 0x178bfbff
2025-05-24 16:39:57 (53896): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-24 16:39:57 (53896): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-24 16:39:57 (53896): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-24 16:39:57 (53896): Detected: Web Application Enabled (http://localhost:49187)
2025-05-24 16:39:57 (53896): Preference change detected
2025-05-24 16:39:57 (53896): Setting CPU throttle for VM. (100%)
2025-05-24 16:39:57 (53896): Setting network throttle for VM. (1024KB)
2025-05-24 16:39:58 (53896): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-24 16:39:59 (53896): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-24 16:39:59 (53896): Guest Log: BIOS: Booting from Hard Disk...
2025-05-24 16:40:01 (53896): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-24 16:40:01 (53896): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-24 16:40:01 (53896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-24 16:40:07 (53896): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-24 16:40:07 (53896): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-24 16:40:11 (53896): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-24 16:40:11 (53896): Guest Log: 00:00:00.000127 main     Log opened 2025-05-24T16:40:09.362459000Z
2025-05-24 16:40:11 (53896): Guest Log: 00:00:00.000222 main     OS Product: Linux
2025-05-24 16:40:11 (53896): Guest Log: 00:00:00.000247 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-24 16:40:11 (53896): Guest Log: 00:00:00.000266 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-24 16:40:11 (53896): Guest Log: 00:00:00.000285 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-24 16:40:11 (53896): Guest Log: 00:00:00.000285 main     Process ID: 1373
2025-05-24 16:40:11 (53896): Guest Log: 00:00:00.000286 main     Package type: LINUX_64BITS_GENERIC
2025-05-24 16:40:11 (53896): Guest Log: 00:00:00.001027 main     5.2.32 r132073 started. Verbose level = 0
2025-05-24 16:40:11 (53896): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-24 16:40:11 (53896): Guest Log: [INFO] Mounting shared directory
2025-05-24 16:40:11 (53896): Guest Log: [INFO] Checking for init_data.xml
2025-05-24 16:40:14 (53896): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-24 16:40:14 (53896): Guest Log: [INFO] Detected branch: prod
2025-05-24 16:40:14 (53896): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-24 16:40:14 (53896): Guest Log: Copying input files
2025-05-24 16:40:15 (53896): Guest Log: Copied input files into RunAtlas.
2025-05-24 16:40:15 (53896): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.3:3128 - will set in /etc/cvmfs/default.local
2025-05-24 16:40:21 (53896): Guest Log: 00:00:10.018989 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 953 347 000ns (GuestNow=1 748 119 221 317 819 000 ns GuestLast=1 748 104 809 364 472 000 ns fSetTimeLastLoop=true )
2025-05-24 16:40:22 (53896): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-24 16:40:22 (53896): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-24 16:40:22 (53896): Guest Log: 2.6.3.0 1651 0 29616 146378 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.3:3128 1
2025-05-24 16:40:23 (53896): Guest Log: copied the webapp to /var/www
2025-05-24 16:40:23 (53896): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-24 16:40:23 (53896): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-24 16:40:23 (53896): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-24 16:40:23 (53896): Guest Log:  *** Starting ATLAS job. (PandaID=6665380027 taskID=44871837) ***
2025-05-24 17:40:16 (53896): Guest Log:  *** Job finished ***
2025-05-24 17:40:16 (53896): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-24 17:40:16 (53896): Guest Log: 2025-05-24 21:40:00,189 | INFO     | [data] queue_monitor thread has finished
2025-05-24 17:40:16 (53896): Guest Log: 2025-05-24 21:40:06,323 | INFO     | job.realtimelogging is not enabled
2025-05-24 17:40:16 (53896): Guest Log: 2025-05-24 21:40:07,325 | INFO     | [payload] run_realtimelog thread has finished
2025-05-24 17:40:16 (53896): Guest Log: 2025-05-24 21:40:08,785 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140169716815680)>', '<ExcThread(monitor, started 140169093027584)>']
2025-05-24 17:40:16 (53896): Guest Log: 2025-05-24 21:40:09,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-24 17:40:16 (53896): Guest Log: 2025-05-24 21:40:09,756 | INFO     | [monitor] control thread has ended
2025-05-24 17:40:16 (53896): Guest Log: 2025-05-24 21:40:13,882 | INFO     | all workflow threads have been joined
2025-05-24 17:40:16 (53896): Guest Log: 2025-05-24 21:40:13,882 | INFO     | end of generic workflow (traces error code: 0)
2025-05-24 17:40:16 (53896): Guest Log: 2025-05-24 21:40:13,882 | INFO     | traces error code: 0
2025-05-24 17:40:16 (53896): Guest Log: 2025-05-24 21:40:13,882 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-24 17:40:16 (53896): Guest Log: 2025-05-24 21:40:13,944 [wrapper] ==== pilot stdout END ====
2025-05-24 17:40:16 (53896): Guest Log: 2025-05-24 21:40:13,948 [wrapper] ==== wrapper stdout RESUME ====
2025-05-24 17:40:16 (53896): Guest Log: 2025-05-24 21:40:13,951 [wrapper] pilotpid: 5985
2025-05-24 17:40:16 (53896): Guest Log: 2025-05-24 21:40:13,955 [wrapper] Pilot exit status: 0
2025-05-24 17:40:16 (53896): Guest Log: 2025-05-24 21:40:13,974 [wrapper] pandaids: 6665380027
2025-05-24 17:40:16 (53896): Guest Log: 2025-05-24 21:40:14,002 [wrapper] cleanup supervisor_pilot 22095 5986
2025-05-24 17:40:16 (53896): Guest Log: 2025-05-24 21:40:14,006 [wrapper] Test setup, not cleaning
2025-05-24 17:40:16 (53896): Guest Log: 2025-05-24 21:40:14,010 [wrapper] apfmon messages muted
2025-05-24 17:40:16 (53896): Guest Log: 2025-05-24 21:40:14,015 [wrapper] ==== wrapper stdout END ====
2025-05-24 17:40:16 (53896): Guest Log: 2025-05-24 21:40:14,018 [wrapper] ==== wrapper stderr END ====
2025-05-24 17:40:16 (53896): Guest Log:  *** Error codes and diagnostics ***
2025-05-24 17:40:16 (53896): Guest Log:     "exeErrorCode": 0,
2025-05-24 17:40:16 (53896): Guest Log:     "exeErrorDiag": "",
2025-05-24 17:40:16 (53896): Guest Log:     "pilotErrorCode": 0,
2025-05-24 17:40:16 (53896): Guest Log:     "pilotErrorDiag": "",
2025-05-24 17:40:16 (53896): Guest Log:  *** Listing of results directory ***
2025-05-24 17:40:16 (53896): Guest Log: total 196556
2025-05-24 17:40:16 (53896): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 24 10:13 pilot3.tar.gz
2025-05-24 17:40:16 (53896): Guest Log: -rwx------. 1 atlas atlas     37140 May 24 10:27 runpilot2-wrapper.sh
2025-05-24 17:40:16 (53896): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 24 10:27 queuedata.json
2025-05-24 17:40:16 (53896): Guest Log: -rwxr-xr-x. 1 atlas atlas    508878 May 24 20:40 input.tar.gz
2025-05-24 17:40:16 (53896): Guest Log: -rwxr-xr-x. 1 atlas atlas      9304 May 24 20:40 init_data.xml
2025-05-24 17:40:16 (53896): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 24 20:40 start_atlas.sh
2025-05-24 17:40:16 (53896): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 24 20:40 EVNT.44871834._000626.pool.root.1 -> /data/./ATLAS.root_0
2025-05-24 17:40:16 (53896): Guest Log: -rw-r--r--. 1 atlas atlas      2555 May 24 20:40 pandaJob.out
2025-05-24 17:40:16 (53896): Guest Log: -rw-------. 1 atlas atlas    990811 May 24 20:40 agis_schedconf.cvmfs.json
2025-05-24 17:40:16 (53896): Guest Log: -rw-------. 1 atlas atlas   1596740 May 24 20:40 agis_ddmendpoints.agis.ALL.json
2025-05-24 17:40:16 (53896): Guest Log: drwx------. 4 atlas atlas      4096 May 24 20:40 pilot3
2025-05-24 17:40:16 (53896): Guest Log: -rw-------. 1 atlas atlas 196283918 May 24 21:39 HITS.44871837._015631.pool.root.1
2025-05-24 17:40:16 (53896): Guest Log: -rw-------. 1 atlas atlas        95 May 24 21:39 pilot_heartbeat.json
2025-05-24 17:40:16 (53896): Guest Log: -rw-------. 1 atlas atlas      1037 May 24 21:39 memory_monitor_summary.json
2025-05-24 17:40:16 (53896): Guest Log: -rw-------. 1 atlas atlas    274875 May 24 21:39 log.44871837._015631.job.log.tgz.1
2025-05-24 17:40:16 (53896): Guest Log: -rw-------. 1 atlas atlas      7704 May 24 21:39 heartbeat.json
2025-05-24 17:40:16 (53896): Guest Log: -rw-------. 1 atlas atlas      4485 May 24 21:40 pilotlog.txt
2025-05-24 17:40:16 (53896): Guest Log: -rw-------. 1 atlas atlas    339271 May 24 21:40 log.44871837._015631.job.log.1
2025-05-24 17:40:16 (53896): Guest Log: -rw-------. 1 atlas atlas       357 May 24 21:40 output.list
2025-05-24 17:40:16 (53896): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 24 21:40 runtime_log
2025-05-24 17:40:16 (53896): Guest Log: -rw-------. 1 atlas atlas    634880 May 24 21:40 result.tar.gz
2025-05-24 17:40:16 (53896): Guest Log: -rw-r--r--. 1 atlas atlas      8591 May 24 21:40 runtime_log.err
2025-05-24 17:40:16 (53896): Guest Log: -rw-------. 1 atlas atlas       654 May 24 21:40 mQwMDmQH1c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmw9QKDmv5cUqn.diag
2025-05-24 17:40:16 (53896): Guest Log: Looking for outputfile HITS.44871837._015631.pool.root.1
2025-05-24 17:40:16 (53896): Guest Log: HITS file was successfully produced
2025-05-24 17:40:16 (53896): Guest Log: -rw-------. 1 atlas atlas 196283918 May 24 21:39 /home/atlas/RunAtlas/HITS.44871837._015631.pool.root.1
2025-05-24 17:40:17 (53896): Guest Log: Successfully finished the ATLAS job!
2025-05-24 17:40:17 (53896): Guest Log: Copying the results back to the shared directory!
2025-05-24 17:40:17 (53896): Guest Log:  *** Contents of shared directory: ***
2025-05-24 17:40:17 (53896): Guest Log: total 412332
2025-05-24 17:40:17 (53896): Guest Log: -rwxrwxrwx. 1 root root 224766846 May 24 20:39 ATLAS.root_0
2025-05-24 17:40:17 (53896): Guest Log: -rwxrwxrwx. 1 root root 196283918 May 24  2025 HITS.pool.root.1
2025-05-24 17:40:17 (53896): Guest Log: -rwxrwxrwx. 1 root root      9304 May 24 20:39 init_data.xml
2025-05-24 17:40:17 (53896): Guest Log: -rwxrwxrwx. 1 root root    508878 May 24 15:42 input.tar.gz
2025-05-24 17:40:17 (53896): Guest Log: -rwxrwxrwx. 1 root root    634880 May 24  2025 result.tar.gz
2025-05-24 17:40:17 (53896): Guest Log: -rwxrwxrwx. 1 root root     15093 May 24 15:42 start_atlas.sh
2025-05-24 17:40:17 (53896): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-24 17:40:17 (53896): VM Completion File Detected.
2025-05-24 17:40:17 (53896): Powering off VM.
2025-05-24 17:40:17 (53896): Successfully stopped VM.
2025-05-24 17:40:17 (53896): Deregistering VM. (boinc_aeb710a48ac2e188, slot#0)
2025-05-24 17:40:17 (53896): Removing network bandwidth throttle group from VM.
2025-05-24 17:40:17 (53896): Removing VM from VirtualBox.
17:40:23 (53896): called boinc_finish(0)

</stderr_txt>
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