Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:11:24 (360343): wrapper (7.7.26015): starting
07:11:24 (360343): wrapper: running run_atlas (--nthreads 6)
[2025-05-25 07:11:24] Arguments: --nthreads 6
[2025-05-25 07:11:24] Threads: 6
[2025-05-25 07:11:24] Checking for CVMFS
[2025-05-25 07:11:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 07:11:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 07:11:24] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 07:11:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 07:11:25] 2.11.5.0 3961534 1057 69272 146381 0 186 43648494 52428801 607 130560 0 1627922 99.993 309720 101 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-05-25 07:11:25] CVMFS is ok
[2025-05-25 07:11:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 07:11:25] Checking for apptainer binary...
[2025-05-25 07:11:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 07:11:25] Running /usr/bin/apptainer --version
[2025-05-25 07:11:25] apptainer version 1.3.6-1.el9
[2025-05-25 07:11:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 07:11:25] testio002
[2025-05-25 07:11:25] apptainer works
[2025-05-25 07:11:25] Set ATHENA_PROC_NUMBER=6
[2025-05-25 07:11:25] Set ATHENA_CORE_NUMBER=6
[2025-05-25 07:11:25] Starting ATLAS job with PandaID=6665380012
[2025-05-25 07:11:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 08:40:03]  *** The last 200 lines of the pilot log: ***
[2025-05-25 08:40:03] 2025-05-24 23:39:01,607 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:40:03] 2025-05-24 23:39:04,110 | INFO     | monitor loop #402: job 0:6665380012 is in state 'finished'
[2025-05-25 08:40:03] 2025-05-24 23:39:04,110 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:40:03] 2025-05-24 23:39:06,613 | INFO     | monitor loop #403: job 0:6665380012 is in state 'finished'
[2025-05-25 08:40:03] 2025-05-24 23:39:06,613 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:40:03] 2025-05-24 23:39:09,116 | INFO     | monitor loop #404: job 0:6665380012 is in state 'finished'
[2025-05-25 08:40:03] 2025-05-24 23:39:09,116 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:40:03] 2025-05-24 23:39:11,618 | INFO     | monitor loop #405: job 0:6665380012 is in state 'finished'
[2025-05-25 08:40:03] 2025-05-24 23:39:11,618 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:40:03] 2025-05-24 23:39:14,120 | INFO     | monitor loop #406: job 0:6665380012 is in state 'finished'
[2025-05-25 08:40:03] 2025-05-24 23:39:14,120 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:40:03] 2025-05-24 23:39:16,622 | INFO     | monitor loop #407: job 0:6665380012 is in state 'finished'
[2025-05-25 08:40:03] 2025-05-24 23:39:16,623 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:40:03] 2025-05-24 23:39:19,125 | INFO     | monitor loop #408: job 0:6665380012 is in state 'finished'
[2025-05-25 08:40:03] 2025-05-24 23:39:19,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:40:03] 2025-05-24 23:39:21,628 | INFO     | monitor loop #409: job 0:6665380012 is in state 'finished'
[2025-05-25 08:40:03] 2025-05-24 23:39:21,628 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:40:03] 2025-05-24 23:39:21,753 | INFO     | PID=364085 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-25 08:40:03] 2025-05-24 23:39:21,753 | INFO     | .. there are 2 such processes running
[2025-05-25 08:40:03] 2025-05-24 23:39:24,130 | INFO     | monitor loop #410: job 0:6665380012 is in state 'finished'
[2025-05-25 08:40:03] 2025-05-24 23:39:24,130 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:40:03] 2025-05-24 23:39:26,633 | INFO     | monitor loop #411: job 0:6665380012 is in state 'finished'
[2025-05-25 08:40:03] 2025-05-24 23:39:26,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:40:03] 2025-05-24 23:39:29,135 | INFO     | monitor loop #412: job 0:6665380012 is in state 'finished'
[2025-05-25 08:40:03] 2025-05-24 23:39:29,135 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:40:03] 2025-05-24 23:39:31,638 | INFO     | monitor loop #413: job 0:6665380012 is in state 'finished'
[2025-05-25 08:40:03] 2025-05-24 23:39:31,638 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:40:03] 2025-05-24 23:39:34,141 | INFO     | monitor loop #414: job 0:6665380012 is in state 'finished'
[2025-05-25 08:40:03] 2025-05-24 23:39:34,141 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:40:03] 2025-05-24 23:39:36,644 | INFO     | monitor loop #415: job 0:6665380012 is in state 'finished'
[2025-05-25 08:40:03] 2025-05-24 23:39:36,644 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:40:03] 2025-05-24 23:39:39,146 | INFO     | monitor loop #416: job 0:6665380012 is in state 'finished'
[2025-05-25 08:40:03] 2025-05-24 23:39:39,146 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:40:03] 2025-05-24 23:39:41,649 | INFO     | monitor loop #417: job 0:6665380012 is in state 'finished'
[2025-05-25 08:40:03] 2025-05-24 23:39:41,649 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:40:03] 2025-05-24 23:39:43,866 | INFO     | PID=364085 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-25 08:40:03] 2025-05-24 23:39:43,866 | INFO     | .. there are 2 such processes running
[2025-05-25 08:40:03] 2025-05-24 23:39:44,151 | INFO     | monitor loop #418: job 0:6665380012 is in state 'finished'
[2025-05-25 08:40:03] 2025-05-24 23:39:44,151 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:40:03] 2025-05-24 23:39:44,395 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-25 08:40:03] 2025-05-24 23:39:44,395 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6665380012/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 08:40:03] 2025-05-24 23:39:44,396 | INFO     | extracted standard info from prmon json
[2025-05-25 08:40:03] 2025-05-24 23:39:44,396 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 08:40:03] 2025-05-24 23:39:44,396 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 08:40:03] 2025-05-24 23:39:44,396 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 08:40:03] 2025-05-24 23:39:44,396 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 08:40:03] 2025-05-24 23:39:44,396 | INFO     | fitting pss+swap vs Time
[2025-05-25 08:40:03] 2025-05-24 23:39:44,396 | INFO     | sum of square deviations: 152858680.0
[2025-05-25 08:40:03] 2025-05-24 23:39:44,397 | INFO     | sum of deviations: 6975793958.000001
[2025-05-25 08:40:03] 2025-05-24 23:39:44,397 | INFO     | mean x: 1748127394.0
[2025-05-25 08:40:03] 2025-05-24 23:39:44,397 | INFO     | mean y: 2533549.4430379746
[2025-05-25 08:40:03] 2025-05-24 23:39:44,397 | INFO     | -- intersect: -79774267564.3667
[2025-05-25 08:40:03] 2025-05-24 23:39:44,397 | INFO     | intersect: -79774267564.3667
[2025-05-25 08:40:03] 2025-05-24 23:39:44,397 | INFO     | chi2: 1.542667370907061
[2025-05-25 08:40:03] 2025-05-24 23:39:44,397 | INFO     | -- intersect: -79774267564.3667
[2025-05-25 08:40:03] 2025-05-24 23:39:44,397 | INFO     | current memory leak: 45.64 B/s (using 79 data points, chi2=1.54)
[2025-05-25 08:40:03] 2025-05-24 23:39:44,397 | INFO     | ..............................
[2025-05-25 08:40:03] 2025-05-24 23:39:44,397 | INFO     | . Timing measurements:
[2025-05-25 08:40:03] 2025-05-24 23:39:44,397 | INFO     | . get job = 0 s
[2025-05-25 08:40:03] 2025-05-24 23:39:44,397 | INFO     | . initial setup = 4 s
[2025-05-25 08:40:03] 2025-05-24 23:39:44,397 | INFO     | . payload setup = 1 s
[2025-05-25 08:40:03] 2025-05-24 23:39:44,397 | INFO     | . stage-in = 0 s
[2025-05-25 08:40:03] 2025-05-24 23:39:44,397 | INFO     | . payload execution = 5195 s
[2025-05-25 08:40:03] 2025-05-24 23:39:44,397 | INFO     | . stage-out = 0 s
[2025-05-25 08:40:03] 2025-05-24 23:39:44,397 | INFO     | . log creation = 0 s
[2025-05-25 08:40:03] 2025-05-24 23:39:44,397 | INFO     | ..............................
[2025-05-25 08:40:03] 2025-05-24 23:39:44,423 | INFO     | 
[2025-05-25 08:40:03] 2025-05-24 23:39:44,423 | INFO     | job summary report
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | --------------------------------------------------
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | PanDA job id: 6665380012
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | task id: 44871837
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | errors: (none)
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | pilot state: finished 
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | transexitcode: 0
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | exeerrorcode: 0
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | exeerrordiag: 
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | exitcode: 0
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | exitmsg: OK
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | cpuconsumptiontime: 26704 s
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | nevents: 400
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | neventsw: 0
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | pid: 370699
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | pgrp: 370699
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | corecount: 6
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | event service: False
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | sizes: {0: 2393739, 1: 2393945, 11: 2393973, 5201: 2429223, 5204: 2429223, 5277: 2429393}
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | --------------------------------------------------
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | 
[2025-05-25 08:40:03] 2025-05-24 23:39:44,424 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-05-25 08:40:03] 2025-05-24 23:39:44,430 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 08:40:03] 2025-05-24 23:39:44,430 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 08:40:03] 2025-05-24 23:39:44,430 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 08:40:03] 2025-05-24 23:39:44,430 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 08:40:03] 2025-05-24 23:39:44,430 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 08:40:03] 2025-05-24 23:39:44,431 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 08:40:03] 2025-05-24 23:39:44,431 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 08:40:03] 2025-05-24 23:39:44,431 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 08:40:03] 2025-05-24 23:39:44,431 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 08:40:03] 2025-05-24 23:39:44,431 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 08:40:03] 2025-05-24 23:39:44,431 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 08:40:03] 2025-05-24 23:39:44,431 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 08:40:03] 2025-05-24 23:39:44,431 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 08:40:03] 2025-05-24 23:39:44,431 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 08:40:03] 2025-05-24 23:39:44,431 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 08:40:03] 2025-05-24 23:39:44,431 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 08:40:03] 2025-05-24 23:39:44,431 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 08:40:03] 2025-05-24 23:39:44,431 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 08:40:03] 2025-05-24 23:39:44,431 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 08:40:03] 2025-05-24 23:39:44,431 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 08:40:03] 2025-05-24 23:39:44,431 | INFO     | job 6665380012 has completed (purged errors)
[2025-05-25 08:40:03] 2025-05-24 23:39:44,431 | INFO     | overall cleanup function is called
[2025-05-25 08:40:03] 2025-05-24 23:39:45,436 | INFO     | --- collectZombieJob: --- 10, [370699]
[2025-05-25 08:40:03] 2025-05-24 23:39:45,436 | INFO     | zombie collector waiting for pid 370699
[2025-05-25 08:40:03] 2025-05-24 23:39:45,436 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 08:40:03] 2025-05-24 23:39:45,436 | INFO     | collected zombie processes
[2025-05-25 08:40:03] 2025-05-24 23:39:45,436 | INFO     | will attempt to kill all subprocesses of pid=370699
[2025-05-25 08:40:03] 2025-05-24 23:39:45,466 | INFO     | process IDs to be killed: [370699] (in reverse order)
[2025-05-25 08:40:03] 2025-05-24 23:39:45,479 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 08:40:03] 2025-05-24 23:39:45,479 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 08:40:03] 2025-05-24 23:39:45,480 | INFO     | did not find any defunct processes belonging to 370699
[2025-05-25 08:40:03] 2025-05-24 23:39:45,481 | INFO     | did not find any defunct processes belonging to 370699
[2025-05-25 08:40:03] 2025-05-24 23:39:45,481 | INFO     | ready for new job
[2025-05-25 08:40:03] 2025-05-24 23:39:45,481 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 08:40:03] 2025-05-24 23:39:45,481 | INFO     | **************************************
[2025-05-25 08:40:03] 2025-05-24 23:39:45,481 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 08:40:03] 2025-05-24 23:39:45,481 | INFO     | **************************************
[2025-05-25 08:40:03] 2025-05-24 23:39:45,481 | INFO     | 
[2025-05-25 08:40:03] 2025-05-24 23:39:45,482 | INFO     | architecture information:
[2025-05-25 08:40:03] 2025-05-24 23:39:45,482 | INFO     | executing command: cat /etc/os-release
[2025-05-25 08:40:03] 2025-05-24 23:39:45,486 | INFO     | cat /etc/os-release:
[2025-05-25 08:40:03] NAME="CentOS Linux"
[2025-05-25 08:40:03] VERSION="7 (Core)"
[2025-05-25 08:40:03] ID="centos"
[2025-05-25 08:40:03] ID_LIKE="rhel fedora"
[2025-05-25 08:40:03] VERSION_ID="7"
[2025-05-25 08:40:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 08:40:03] ANSI_COLOR="0;31"
[2025-05-25 08:40:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 08:40:03] HOME_URL="https://www.centos.org/"
[2025-05-25 08:40:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 08:40:03] 
[2025-05-25 08:40:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 08:40:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 08:40:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 08:40:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 08:40:03] 
[2025-05-25 08:40:03] 2025-05-24 23:39:45,486 | INFO     | **************************************
[2025-05-25 08:40:03] 2025-05-24 23:39:45,988 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-05-25 08:40:03] 2025-05-24 23:39:45,993 | INFO     | sufficient remaining disk space (300852183040 B)
[2025-05-25 08:40:03] 2025-05-24 23:39:45,993 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 08:40:03] 2025-05-24 23:39:45,993 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 08:40:03] 2025-05-24 23:39:45,993 | INFO     | update_server=False
[2025-05-25 08:40:03] 2025-05-24 23:39:45,993 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 08:40:03] 2025-05-24 23:39:45,993 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 08:40:03] 2025-05-24 23:39:45,993 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 08:40:03] 2025-05-24 23:39:45,993 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 08:40:03] 2025-05-24 23:39:45,994 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 08:40:03] 2025-05-24 23:39:45,994 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 08:40:03] 2025-05-24 23:39:45,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 08:40:03] 2025-05-24 23:39:45,994 | INFO     | aborting loop
[2025-05-25 08:40:03] 2025-05-24 23:39:46,535 | INFO     | all data control threads have been joined
[2025-05-25 08:40:03] 2025-05-24 23:39:46,665 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 08:40:03] 2025-05-24 23:39:46,761 | INFO     | all payload control threads have been joined
[2025-05-25 08:40:03] 2025-05-24 23:39:46,998 | INFO     | [job] queue monitor thread has finished
[2025-05-25 08:40:03] 2025-05-24 23:39:46,998 | INFO     | [job] job monitor thread has finished
[2025-05-25 08:40:03] 2025-05-24 23:39:46,998 | INFO     | [job] retrieve thread has finished
[2025-05-25 08:40:03] 2025-05-24 23:39:47,023 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 08:40:03] 2025-05-24 23:39:47,169 | INFO     | all job control threads have been joined
[2025-05-25 08:40:03] 2025-05-24 23:39:47,235 | INFO     | [payload] failed_post thread has finished
[2025-05-25 08:40:03] 2025-05-24 23:39:47,539 | INFO     | [data] control thread has finished
[2025-05-25 08:40:03] 2025-05-24 23:39:47,711 | INFO     | [payload] validate_post thread has finished
[2025-05-25 08:40:03] 2025-05-24 23:39:47,766 | INFO     | [payload] control thread has finished
[2025-05-25 08:40:03] 2025-05-24 23:39:48,171 | INFO     | [job] control thread has finished
[2025-05-25 08:40:03] 2025-05-24 23:39:48,290 | INFO     | [data] copytool_in thread has finished
[2025-05-25 08:40:03] 2025-05-24 23:39:48,397 | INFO     | [job] validate thread has finished
[2025-05-25 08:40:03] 2025-05-24 23:39:48,397 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 08:40:03] 2025-05-24 23:39:48,475 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 08:40:03] 2025-05-24 23:39:48,667 | INFO     | [data] copytool_out thread has finished
[2025-05-25 08:40:03] 2025-05-24 23:39:49,040 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 08:40:03] 2025-05-24 23:39:53,046 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 08:40:03] 2025-05-24 23:39:56,485 | INFO     | job.realtimelogging is not enabled
[2025-05-25 08:40:03] 2025-05-24 23:39:57,490 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 08:40:03] 2025-05-24 23:39:58,896 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139975654184768)>', '<ExcThread(monitor, started 139975307806464)>']
[2025-05-25 08:40:03] 2025-05-24 23:39:59,059 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 08:40:03] 2025-05-24 23:39:59,059 | INFO     | [monitor] control thread has ended
[2025-05-25 08:40:03] 2025-05-24 23:40:03,921 | INFO     | all workflow threads have been joined
[2025-05-25 08:40:03] 2025-05-24 23:40:03,921 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 08:40:03] 2025-05-24 23:40:03,921 | INFO     | traces error code: 0
[2025-05-25 08:40:03] 2025-05-24 23:40:03,921 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 08:40:03] 2025-05-24 23:40:03,957 [wrapper] ==== pilot stdout END ====
[2025-05-25 08:40:03] 2025-05-24 23:40:03,958 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 08:40:03] 2025-05-24 23:40:03,959 [wrapper] pilotpid: 364085
[2025-05-25 08:40:03] 2025-05-24 23:40:03,960 [wrapper] Pilot exit status: 0
[2025-05-25 08:40:03] 2025-05-24 23:40:03,962 [wrapper] pandaids: 6665380012
[2025-05-25 08:40:03] 2025-05-24 23:40:03,969 [wrapper] cleanup supervisor_pilot  386600 364086
[2025-05-25 08:40:03] 2025-05-24 23:40:03,970 [wrapper] Test setup, not cleaning
[2025-05-25 08:40:03] 2025-05-24 23:40:03,971 [wrapper] apfmon messages muted
[2025-05-25 08:40:03] 2025-05-24 23:40:03,972 [wrapper] ==== wrapper stdout END ====
[2025-05-25 08:40:03] 2025-05-24 23:40:03,973 [wrapper] ==== wrapper stderr END ====
[2025-05-25 08:40:03]  *** Error codes and diagnostics ***
[2025-05-25 08:40:03]     "exeErrorCode": 0,
[2025-05-25 08:40:03]     "exeErrorDiag": "",
[2025-05-25 08:40:03]     "pilotErrorCode": 0,
[2025-05-25 08:40:03]     "pilotErrorDiag": "",
[2025-05-25 08:40:03]  *** Listing of results directory ***
[2025-05-25 08:40:03] total 415696
[2025-05-25 08:40:03] -rw-r--r--. 1 boinc boinc    495897 May 24 19:13 pilot3.tar.gz
[2025-05-25 08:40:03] -rw-r--r--. 1 boinc boinc      5111 May 24 19:29 queuedata.json
[2025-05-25 08:40:03] -rwx------. 1 boinc boinc     37140 May 24 19:30 runpilot2-wrapper.sh
[2025-05-25 08:40:03] -rw-r--r--. 1 boinc boinc       100 May 25 07:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 08:40:03] -rwxr-xr-x. 1 boinc boinc      7986 May 25 07:11 run_atlas
[2025-05-25 08:40:03] -rw-r--r--. 1 boinc boinc       105 May 25 07:11 job.xml
[2025-05-25 08:40:03] -rw-r--r--. 2 boinc boinc    508874 May 25 07:11 input.tar.gz
[2025-05-25 08:40:03] -rw-r--r--. 1 boinc boinc      9627 May 25 07:11 init_data.xml
[2025-05-25 08:40:03] -rw-r--r--. 2 boinc boinc 224400989 May 25 07:11 EVNT.44871834._000625.pool.root.1
[2025-05-25 08:40:03] -rw-r--r--. 2 boinc boinc     15093 May 25 07:11 start_atlas.sh
[2025-05-25 08:40:03] drwxrwx--x. 2 boinc boinc        68 May 25 07:11 shared
[2025-05-25 08:40:03] -rw-r--r--. 1 boinc boinc         0 May 25 07:11 boinc_lockfile
[2025-05-25 08:40:03] -rw-r--r--. 1 boinc boinc      2558 May 25 07:11 pandaJob.out
[2025-05-25 08:40:03] -rw-------. 1 boinc boinc    990803 May 25 07:11 agis_schedconf.cvmfs.json
[2025-05-25 08:40:03] -rw-------. 1 boinc boinc   1596740 May 25 07:11 agis_ddmendpoints.agis.ALL.json
[2025-05-25 08:40:03] drwx------. 4 boinc boinc      4096 May 25 07:11 pilot3
[2025-05-25 08:40:03] -rw-------. 1 boinc boinc 195862622 May 25 08:38 HITS.44871837._015616.pool.root.1
[2025-05-25 08:40:03] -rw-r--r--. 1 boinc boinc       530 May 25 08:38 boinc_task_state.xml
[2025-05-25 08:40:03] -rw-------. 1 boinc boinc      1026 May 25 08:38 memory_monitor_summary.json
[2025-05-25 08:40:03] -rw-------. 1 boinc boinc    275688 May 25 08:38 log.44871837._015616.job.log.tgz.1
[2025-05-25 08:40:03] -rw-------. 1 boinc boinc        95 May 25 08:39 pilot_heartbeat.json
[2025-05-25 08:40:03] -rw-r--r--. 1 boinc boinc      8192 May 25 08:39 boinc_mmap_file
[2025-05-25 08:40:03] -rw-r--r--. 1 boinc boinc        27 May 25 08:39 wrapper_checkpoint.txt
[2025-05-25 08:40:03] -rw-------. 1 boinc boinc      7691 May 25 08:39 heartbeat.json
[2025-05-25 08:40:03] -rw-------. 1 boinc boinc      4549 May 25 08:40 pilotlog.txt
[2025-05-25 08:40:03] -rw-------. 1 boinc boinc    518252 May 25 08:40 log.44871837._015616.job.log.1
[2025-05-25 08:40:03] -rw-------. 1 boinc boinc       357 May 25 08:40 output.list
[2025-05-25 08:40:03] -rw-r--r--. 1 boinc boinc       620 May 25 08:40 runtime_log
[2025-05-25 08:40:03] -rw-------. 1 boinc boinc    808960 May 25 08:40 result.tar.gz
[2025-05-25 08:40:03] -rw-r--r--. 1 boinc boinc      8617 May 25 08:40 runtime_log.err
[2025-05-25 08:40:03] -rw-------. 1 boinc boinc       641 May 25 08:40 HPPKDmhK1c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5ARKDmrCniUm.diag
[2025-05-25 08:40:03] -rw-r--r--. 1 boinc boinc     22073 May 25 08:40 stderr.txt
[2025-05-25 08:40:03] HITS file was successfully produced:
[2025-05-25 08:40:03] -rw-------. 1 boinc boinc 195862622 May 25 08:38 shared/HITS.pool.root.1
[2025-05-25 08:40:03]  *** Contents of shared directory: ***
[2025-05-25 08:40:03] total 411728
[2025-05-25 08:40:03] -rw-r--r--. 2 boinc boinc    508874 May 25 07:11 input.tar.gz
[2025-05-25 08:40:03] -rw-r--r--. 2 boinc boinc 224400989 May 25 07:11 ATLAS.root_0
[2025-05-25 08:40:03] -rw-r--r--. 2 boinc boinc     15093 May 25 07:11 start_atlas.sh
[2025-05-25 08:40:03] -rw-------. 1 boinc boinc 195862622 May 25 08:38 HITS.pool.root.1
[2025-05-25 08:40:03] -rw-------. 1 boinc boinc    808960 May 25 08:40 result.tar.gz
08:40:05 (360343): run_atlas exited; CPU time 26730.280380
08:40:05 (360343): called boinc_finish(0)

</stderr_txt>
]]>

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