Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:48:31 (2051832): wrapper (7.7.26015): starting
03:48:31 (2051832): wrapper: running run_atlas (--nthreads 6)
[2025-05-25 03:48:31] Arguments: --nthreads 6
[2025-05-25 03:48:31] Threads: 6
[2025-05-25 03:48:31] Checking for CVMFS
[2025-05-25 03:48:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 03:48:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 03:48:31] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 03:48:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 03:48:32] 2.11.5.0 1578993 566 68696 146376 2 187 41399128 52428800 1549 130560 0 1297608 99.995 157654 104 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-05-25 03:48:32] CVMFS is ok
[2025-05-25 03:48:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 03:48:32] Checking for apptainer binary...
[2025-05-25 03:48:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 03:48:32] Running /usr/bin/apptainer --version
[2025-05-25 03:48:32] apptainer version 1.3.5-1.el9
[2025-05-25 03:48:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 03:48:32] testio008
[2025-05-25 03:48:32] apptainer works
[2025-05-25 03:48:32] Set ATHENA_PROC_NUMBER=6
[2025-05-25 03:48:32] Set ATHENA_CORE_NUMBER=6
[2025-05-25 03:48:32] Starting ATLAS job with PandaID=6665441004
[2025-05-25 03:48:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 05:20:01]  *** The last 200 lines of the pilot log: ***
[2025-05-25 05:20:01]  is_tar=False
[2025-05-25 05:20:01]  lfn=log.44871837._017642.job.log.tgz.1
[2025-05-25 05:20:01]  mtime=0
[2025-05-25 05:20:01]  protocol_id=None
[2025-05-25 05:20:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-25 05:20:01]  replicas=None
[2025-05-25 05:20:01]  scope=mc23_13p6TeV
[2025-05-25 05:20:01]  status=None
[2025-05-25 05:20:01]  status_code=0
[2025-05-25 05:20:01]  storage_token=
[2025-05-25 05:20:01]  surl=/var/lib/boinc/slots/14/PanDA_Pilot-6665441004/log.44871837._017642.job.log.tgz.1
[2025-05-25 05:20:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/f4/log.44871837._017642.job.log.tgz.1
[2025-05-25 05:20:01]  workdir=None
[2025-05-25 05:20:01] ]
[2025-05-25 05:20:01] 2025-05-24 20:19:37,428 | INFO     | transferring file log.44871837._017642.job.log.tgz.1 from /var/lib/boinc/slots/14/PanDA_Pilot-6665441004/log.44871837._017642.job.log.tgz.1 to /var/lib/boinc/slots
[2025-05-25 05:20:01] 2025-05-24 20:19:37,428 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/14/PanDA_Pilot-6665441004/log.44871837._017642.job.log.tgz.1 /var/lib/boinc/slots/14/log.44871837._017642.j
[2025-05-25 05:20:01] 2025-05-24 20:19:37,434 | INFO     | adding to output.list: log.44871837._017642.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/f4/log.44871837._017642.job.log.tg
[2025-05-25 05:20:01] 2025-05-24 20:19:37,435 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-25 05:20:01] 2025-05-24 20:19:37,435 | INFO     | summary of transferred files:
[2025-05-25 05:20:01] 2025-05-24 20:19:37,435 | INFO     |  -- lfn=log.44871837._017642.job.log.tgz.1, status_code=0, status=transferred
[2025-05-25 05:20:01] 2025-05-24 20:19:37,435 | INFO     | stage-out finished correctly
[2025-05-25 05:20:01] 2025-05-24 20:19:37,470 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-25 05:20:01] 2025-05-24 20:19:38,001 | INFO     | monitor loop #408: job 0:6665441004 is in state 'finished'
[2025-05-25 05:20:01] 2025-05-24 20:19:38,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:20:01] 2025-05-24 20:19:38,033 | INFO     | PID=2055557 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 05:20:01] 2025-05-24 20:19:38,033 | INFO     | .. there are 3 such processes running
[2025-05-25 05:20:01] 2025-05-24 20:19:39,998 | INFO     | job 6665441004 has state=finished
[2025-05-25 05:20:01] 2025-05-24 20:19:39,998 | INFO     | preparing for final server update for job 6665441004 in state='finished'
[2025-05-25 05:20:01] 2025-05-24 20:19:39,999 | INFO     | this job has now completed (state=finished)
[2025-05-25 05:20:01] 2025-05-24 20:19:39,999 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-25 05:20:01] 2025-05-24 20:19:39,999 | INFO     | log transfer has been attempted: DONE
[2025-05-25 05:20:01] 2025-05-24 20:19:39,999 | INFO     | job 6665441004 has finished - writing final server update
[2025-05-25 05:20:01] 2025-05-24 20:19:39,999 | INFO     | total number of processed events: 400 (read)
[2025-05-25 05:20:01] 2025-05-24 20:19:40,000 | INFO     | executing command: lscpu
[2025-05-25 05:20:01] 2025-05-24 20:19:40,012 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-25 05:20:01] 2025-05-24 20:19:40,504 | INFO     | monitor loop #409: job 0:6665441004 is in state 'finished'
[2025-05-25 05:20:01] 2025-05-24 20:19:40,504 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:20:01] 2025-05-24 20:19:41,326 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 05:20:01] 2025-05-24 20:19:41,326 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6665441004/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 05:20:01] 2025-05-24 20:19:41,327 | INFO     | extracted standard info from prmon json
[2025-05-25 05:20:01] 2025-05-24 20:19:41,327 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 05:20:01] 2025-05-24 20:19:41,327 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 05:20:01] 2025-05-24 20:19:41,327 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 05:20:01] 2025-05-24 20:19:41,327 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 05:20:01] 2025-05-24 20:19:41,328 | INFO     | fitting pss+swap vs Time
[2025-05-25 05:20:01] 2025-05-24 20:19:41,328 | INFO     | sum of square deviations: 177275882.0
[2025-05-25 05:20:01] 2025-05-24 20:19:41,328 | INFO     | sum of deviations: 12201268007.0
[2025-05-25 05:20:01] 2025-05-24 20:19:41,328 | INFO     | mean x: 1748115342.0
[2025-05-25 05:20:01] 2025-05-24 20:19:41,328 | INFO     | mean y: 2401405.939759036
[2025-05-25 05:20:01] 2025-05-24 20:19:41,328 | INFO     | -- intersect: -120314155783.09999
[2025-05-25 05:20:01] 2025-05-24 20:19:41,328 | INFO     | intersect: -120314155783.09999
[2025-05-25 05:20:01] 2025-05-24 20:19:41,329 | INFO     | chi2: 1.4469640641815715
[2025-05-25 05:20:01] 2025-05-24 20:19:41,329 | INFO     | -- intersect: -120314155783.09999
[2025-05-25 05:20:01] 2025-05-24 20:19:41,329 | INFO     | current memory leak: 68.83 B/s (using 83 data points, chi2=1.45)
[2025-05-25 05:20:01] 2025-05-24 20:19:41,329 | INFO     | ..............................
[2025-05-25 05:20:01] 2025-05-24 20:19:41,329 | INFO     | . Timing measurements:
[2025-05-25 05:20:01] 2025-05-24 20:19:41,329 | INFO     | . get job = 0 s
[2025-05-25 05:20:01] 2025-05-24 20:19:41,329 | INFO     | . initial setup = 3 s
[2025-05-25 05:20:01] 2025-05-24 20:19:41,329 | INFO     | . payload setup = 2 s
[2025-05-25 05:20:01] 2025-05-24 20:19:41,329 | INFO     | . stage-in = 0 s
[2025-05-25 05:20:01] 2025-05-24 20:19:41,329 | INFO     | . payload execution = 5439 s
[2025-05-25 05:20:01] 2025-05-24 20:19:41,329 | INFO     | . stage-out = 0 s
[2025-05-25 05:20:01] 2025-05-24 20:19:41,329 | INFO     | . log creation = 0 s
[2025-05-25 05:20:01] 2025-05-24 20:19:41,329 | INFO     | ..............................
[2025-05-25 05:20:01] 2025-05-24 20:19:41,358 | INFO     | 
[2025-05-25 05:20:01] 2025-05-24 20:19:41,358 | INFO     | job summary report
[2025-05-25 05:20:01] 2025-05-24 20:19:41,358 | INFO     | --------------------------------------------------
[2025-05-25 05:20:01] 2025-05-24 20:19:41,358 | INFO     | PanDA job id: 6665441004
[2025-05-25 05:20:01] 2025-05-24 20:19:41,358 | INFO     | task id: 44871837
[2025-05-25 05:20:01] 2025-05-24 20:19:41,358 | INFO     | errors: (none)
[2025-05-25 05:20:01] 2025-05-24 20:19:41,358 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 05:20:01] 2025-05-24 20:19:41,358 | INFO     | pilot state: finished 
[2025-05-25 05:20:01] 2025-05-24 20:19:41,358 | INFO     | transexitcode: 0
[2025-05-25 05:20:01] 2025-05-24 20:19:41,358 | INFO     | exeerrorcode: 0
[2025-05-25 05:20:01] 2025-05-24 20:19:41,358 | INFO     | exeerrordiag: 
[2025-05-25 05:20:01] 2025-05-24 20:19:41,358 | INFO     | exitcode: 0
[2025-05-25 05:20:01] 2025-05-24 20:19:41,358 | INFO     | exitmsg: OK
[2025-05-25 05:20:01] 2025-05-24 20:19:41,358 | INFO     | cpuconsumptiontime: 28117 s
[2025-05-25 05:20:01] 2025-05-24 20:19:41,358 | INFO     | nevents: 400
[2025-05-25 05:20:01] 2025-05-24 20:19:41,359 | INFO     | neventsw: 0
[2025-05-25 05:20:01] 2025-05-24 20:19:41,359 | INFO     | pid: 2062152
[2025-05-25 05:20:01] 2025-05-24 20:19:41,359 | INFO     | pgrp: 2062152
[2025-05-25 05:20:01] 2025-05-24 20:19:41,359 | INFO     | corecount: 6
[2025-05-25 05:20:01] 2025-05-24 20:19:41,359 | INFO     | event service: False
[2025-05-25 05:20:01] 2025-05-24 20:19:41,359 | INFO     | sizes: {0: 2393738, 1: 2393944, 10: 2393972, 5445: 2420442, 5446: 2429441, 5450: 2429555}
[2025-05-25 05:20:01] 2025-05-24 20:19:41,359 | INFO     | --------------------------------------------------
[2025-05-25 05:20:01] 2025-05-24 20:19:41,359 | INFO     | 
[2025-05-25 05:20:01] 2025-05-24 20:19:41,359 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-05-25 05:20:01] 2025-05-24 20:19:41,367 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 05:20:01] 2025-05-24 20:19:41,367 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 05:20:01] 2025-05-24 20:19:41,367 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 05:20:01] 2025-05-24 20:19:41,367 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 05:20:01] 2025-05-24 20:19:41,367 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 05:20:01] 2025-05-24 20:19:41,367 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 05:20:01] 2025-05-24 20:19:41,367 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 05:20:01] 2025-05-24 20:19:41,367 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 05:20:01] 2025-05-24 20:19:41,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 05:20:01] 2025-05-24 20:19:41,368 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 05:20:01] 2025-05-24 20:19:41,368 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 05:20:01] 2025-05-24 20:19:41,368 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 05:20:01] 2025-05-24 20:19:41,368 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 05:20:01] 2025-05-24 20:19:41,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 05:20:01] 2025-05-24 20:19:41,368 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 05:20:01] 2025-05-24 20:19:41,368 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 05:20:01] 2025-05-24 20:19:41,368 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 05:20:01] 2025-05-24 20:19:41,368 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 05:20:01] 2025-05-24 20:19:41,368 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 05:20:01] 2025-05-24 20:19:41,368 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 05:20:01] 2025-05-24 20:19:41,368 | INFO     | job 6665441004 has completed (purged errors)
[2025-05-25 05:20:01] 2025-05-24 20:19:41,368 | INFO     | overall cleanup function is called
[2025-05-25 05:20:01] 2025-05-24 20:19:42,371 | INFO     | --- collectZombieJob: --- 10, [2062152]
[2025-05-25 05:20:01] 2025-05-24 20:19:42,372 | INFO     | zombie collector waiting for pid 2062152
[2025-05-25 05:20:01] 2025-05-24 20:19:42,372 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 05:20:01] 2025-05-24 20:19:42,372 | INFO     | collected zombie processes
[2025-05-25 05:20:01] 2025-05-24 20:19:42,372 | INFO     | will attempt to kill all subprocesses of pid=2062152
[2025-05-25 05:20:01] 2025-05-24 20:19:42,428 | INFO     | process IDs to be killed: [2062152] (in reverse order)
[2025-05-25 05:20:01] 2025-05-24 20:19:42,443 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 05:20:01] 2025-05-24 20:19:42,443 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 05:20:01] 2025-05-24 20:19:42,445 | INFO     | did not find any defunct processes belonging to 2062152
[2025-05-25 05:20:01] 2025-05-24 20:19:42,447 | INFO     | did not find any defunct processes belonging to 2062152
[2025-05-25 05:20:01] 2025-05-24 20:19:42,448 | INFO     | ready for new job
[2025-05-25 05:20:01] 2025-05-24 20:19:42,448 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 05:20:01] 2025-05-24 20:19:42,448 | INFO     | **************************************
[2025-05-25 05:20:01] 2025-05-24 20:19:42,449 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 05:20:01] 2025-05-24 20:19:42,449 | INFO     | **************************************
[2025-05-25 05:20:01] 2025-05-24 20:19:42,449 | INFO     | 
[2025-05-25 05:20:01] 2025-05-24 20:19:42,449 | INFO     | architecture information:
[2025-05-25 05:20:01] 2025-05-24 20:19:42,449 | INFO     | executing command: cat /etc/os-release
[2025-05-25 05:20:01] 2025-05-24 20:19:42,454 | INFO     | cat /etc/os-release:
[2025-05-25 05:20:01] NAME="CentOS Linux"
[2025-05-25 05:20:01] VERSION="7 (Core)"
[2025-05-25 05:20:01] ID="centos"
[2025-05-25 05:20:01] ID_LIKE="rhel fedora"
[2025-05-25 05:20:01] VERSION_ID="7"
[2025-05-25 05:20:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 05:20:01] ANSI_COLOR="0;31"
[2025-05-25 05:20:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 05:20:01] HOME_URL="https://www.centos.org/"
[2025-05-25 05:20:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 05:20:01] 
[2025-05-25 05:20:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 05:20:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 05:20:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 05:20:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 05:20:01] 
[2025-05-25 05:20:01] 2025-05-24 20:19:42,454 | INFO     | **************************************
[2025-05-25 05:20:01] 2025-05-24 20:19:42,956 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-05-25 05:20:01] 2025-05-24 20:19:42,963 | INFO     | sufficient remaining disk space (283377664000 B)
[2025-05-25 05:20:01] 2025-05-24 20:19:42,963 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 05:20:01] 2025-05-24 20:19:42,963 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 05:20:01] 2025-05-24 20:19:42,963 | INFO     | update_server=False
[2025-05-25 05:20:01] 2025-05-24 20:19:42,963 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 05:20:01] 2025-05-24 20:19:42,964 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 05:20:01] 2025-05-24 20:19:42,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 05:20:01] 2025-05-24 20:19:42,964 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 05:20:01] 2025-05-24 20:19:42,964 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 05:20:01] 2025-05-24 20:19:42,964 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 05:20:01] 2025-05-24 20:19:42,969 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 05:20:01] 2025-05-24 20:19:42,988 | INFO     | all payload control threads have been joined
[2025-05-25 05:20:01] 2025-05-24 20:19:43,007 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-25 05:20:01] 2025-05-24 20:19:43,008 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-25 05:20:01] 2025-05-24 20:19:43,008 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 05:20:01] 2025-05-24 20:19:43,008 | INFO     | will abort loop
[2025-05-25 05:20:01] 2025-05-24 20:19:43,192 | INFO     | all job control threads have been joined
[2025-05-25 05:20:01] 2025-05-24 20:19:43,509 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 05:20:01] 2025-05-24 20:19:43,968 | INFO     | [job] retrieve thread has finished
[2025-05-25 05:20:01] 2025-05-24 20:19:43,968 | INFO     | [job] queue monitor thread has finished
[2025-05-25 05:20:01] 2025-05-24 20:19:43,992 | INFO     | all data control threads have been joined
[2025-05-25 05:20:01] 2025-05-24 20:19:43,993 | INFO     | [payload] control thread has finished
[2025-05-25 05:20:01] 2025-05-24 20:19:44,010 | INFO     | [job] job monitor thread has finished
[2025-05-25 05:20:01] 2025-05-24 20:19:44,084 | INFO     | [payload] validate_post thread has finished
[2025-05-25 05:20:01] 2025-05-24 20:19:44,092 | INFO     | [job] validate thread has finished
[2025-05-25 05:20:01] 2025-05-24 20:19:44,197 | INFO     | [job] control thread has finished
[2025-05-25 05:20:01] 2025-05-24 20:19:44,974 | INFO     | [data] copytool_out thread has finished
[2025-05-25 05:20:01] 2025-05-24 20:19:44,997 | INFO     | [data] control thread has finished
[2025-05-25 05:20:01] 2025-05-24 20:19:45,065 | INFO     | [payload] failed_post thread has finished
[2025-05-25 05:20:01] 2025-05-24 20:19:45,130 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 05:20:01] 2025-05-24 20:19:45,368 | INFO     | [data] copytool_in thread has finished
[2025-05-25 05:20:01] 2025-05-24 20:19:45,413 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 05:20:01] 2025-05-24 20:19:45,449 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 05:20:01] 2025-05-24 20:19:47,515 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 05:20:01] 2025-05-24 20:19:53,801 | INFO     | job.realtimelogging is not enabled
[2025-05-25 05:20:01] 2025-05-24 20:19:54,806 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 05:20:01] 2025-05-24 20:19:55,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140579675899712)>', '<ExcThread(monitor, started 140579035932416)>']
[2025-05-25 05:20:01] 2025-05-24 20:19:56,027 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 05:20:01] 2025-05-24 20:19:56,027 | INFO     | [monitor] control thread has ended
[2025-05-25 05:20:01] 2025-05-24 20:20:00,947 | INFO     | all workflow threads have been joined
[2025-05-25 05:20:01] 2025-05-24 20:20:00,948 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 05:20:01] 2025-05-24 20:20:00,948 | INFO     | traces error code: 0
[2025-05-25 05:20:01] 2025-05-24 20:20:00,948 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 05:20:01] 2025-05-24 20:20:00,998 [wrapper] ==== pilot stdout END ====
[2025-05-25 05:20:01] 2025-05-24 20:20:01,002 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 05:20:01] 2025-05-24 20:20:01,003 [wrapper] pilotpid: 2055557
[2025-05-25 05:20:01] 2025-05-24 20:20:01,004 [wrapper] Pilot exit status: 0
[2025-05-25 05:20:01] 2025-05-24 20:20:01,008 [wrapper] pandaids: 6665441004
[2025-05-25 05:20:01] 2025-05-24 20:20:01,021 [wrapper] cleanup supervisor_pilot 2121618 2055558
[2025-05-25 05:20:01] 2025-05-24 20:20:01,022 [wrapper] Test setup, not cleaning
[2025-05-25 05:20:01] 2025-05-24 20:20:01,023 [wrapper] apfmon messages muted
[2025-05-25 05:20:01] 2025-05-24 20:20:01,024 [wrapper] ==== wrapper stdout END ====
[2025-05-25 05:20:01] 2025-05-24 20:20:01,025 [wrapper] ==== wrapper stderr END ====
[2025-05-25 05:20:01]  *** Error codes and diagnostics ***
[2025-05-25 05:20:01]     "exeErrorCode": 0,
[2025-05-25 05:20:01]     "exeErrorDiag": "",
[2025-05-25 05:20:01]     "pilotErrorCode": 0,
[2025-05-25 05:20:01]     "pilotErrorDiag": "",
[2025-05-25 05:20:01]  *** Listing of results directory ***
[2025-05-25 05:20:01] total 422848
[2025-05-25 05:20:01] -rw-r--r--. 1 boinc boinc    495897 May 24 21:38 pilot3.tar.gz
[2025-05-25 05:20:01] -rw-r--r--. 1 boinc boinc      5111 May 24 21:51 queuedata.json
[2025-05-25 05:20:01] -rwx------. 1 boinc boinc     37140 May 24 21:52 runpilot2-wrapper.sh
[2025-05-25 05:20:01] -rw-r--r--. 1 boinc boinc       100 May 25 03:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 05:20:01] -rwxr-xr-x. 1 boinc boinc      7986 May 25 03:48 run_atlas
[2025-05-25 05:20:01] -rw-r--r--. 1 boinc boinc       105 May 25 03:48 job.xml
[2025-05-25 05:20:01] -rw-r--r--. 2 boinc boinc     15093 May 25 03:48 start_atlas.sh
[2025-05-25 05:20:01] drwxrwx--x. 2 boinc boinc        68 May 25 03:48 shared
[2025-05-25 05:20:01] -rw-r--r--. 2 boinc boinc    508882 May 25 03:48 input.tar.gz
[2025-05-25 05:20:01] -rw-r--r--. 1 boinc boinc      9510 May 25 03:48 init_data.xml
[2025-05-25 05:20:01] -rw-r--r--. 2 boinc boinc 223748310 May 25 03:48 EVNT.44871834._000706.pool.root.1
[2025-05-25 05:20:01] -rw-r--r--. 1 boinc boinc         0 May 25 03:48 boinc_lockfile
[2025-05-25 05:20:01] -rw-r--r--. 1 boinc boinc      2557 May 25 03:48 pandaJob.out
[2025-05-25 05:20:01] -rw-------. 1 boinc boinc    988572 May 25 03:48 agis_schedconf.cvmfs.json
[2025-05-25 05:20:01] -rw-------. 1 boinc boinc   1596740 May 25 03:48 agis_ddmendpoints.agis.ALL.json
[2025-05-25 05:20:01] drwx------. 4 boinc boinc      4096 May 25 03:48 pilot3
[2025-05-25 05:20:01] -rw-------. 1 boinc boinc 203808334 May 25 05:19 HITS.44871837._017642.pool.root.1
[2025-05-25 05:20:01] -rw-------. 1 boinc boinc        95 May 25 05:19 pilot_heartbeat.json
[2025-05-25 05:20:01] -rw-r--r--. 1 boinc boinc      8192 May 25 05:19 boinc_mmap_file
[2025-05-25 05:20:01] -rw-r--r--. 1 boinc boinc        27 May 25 05:19 wrapper_checkpoint.txt
[2025-05-25 05:20:01] -rw-r--r--. 1 boinc boinc       529 May 25 05:19 boinc_task_state.xml
[2025-05-25 05:20:01] -rw-------. 1 boinc boinc      1021 May 25 05:19 memory_monitor_summary.json
[2025-05-25 05:20:01] -rw-------. 1 boinc boinc    272124 May 25 05:19 log.44871837._017642.job.log.tgz.1
[2025-05-25 05:20:01] -rw-------. 1 boinc boinc      7667 May 25 05:19 heartbeat.json
[2025-05-25 05:20:01] -rw-------. 1 boinc boinc      4736 May 25 05:20 pilotlog.txt
[2025-05-25 05:20:01] -rw-------. 1 boinc boinc    534324 May 25 05:20 log.44871837._017642.job.log.1
[2025-05-25 05:20:01] -rw-------. 1 boinc boinc       357 May 25 05:20 output.list
[2025-05-25 05:20:01] -rw-r--r--. 1 boinc boinc       620 May 25 05:20 runtime_log
[2025-05-25 05:20:01] -rw-------. 1 boinc boinc    829440 May 25 05:20 result.tar.gz
[2025-05-25 05:20:01] -rw-r--r--. 1 boinc boinc      8631 May 25 05:20 runtime_log.err
[2025-05-25 05:20:01] -rw-------. 1 boinc boinc       642 May 25 05:20 myULDmMX3c7n9Rq4apOajLDm4fhM0noT9bVof3QYDmCnMKDmyu9JWo.diag
[2025-05-25 05:20:01] -rw-r--r--. 1 boinc boinc     21210 May 25 05:20 stderr.txt
[2025-05-25 05:20:01] HITS file was successfully produced:
[2025-05-25 05:20:01] -rw-------. 1 boinc boinc 203808334 May 25 05:19 shared/HITS.pool.root.1
[2025-05-25 05:20:01]  *** Contents of shared directory: ***
[2025-05-25 05:20:01] total 418868
[2025-05-25 05:20:01] -rw-r--r--. 2 boinc boinc     15093 May 25 03:48 start_atlas.sh
[2025-05-25 05:20:01] -rw-r--r--. 2 boinc boinc    508882 May 25 03:48 input.tar.gz
[2025-05-25 05:20:01] -rw-r--r--. 2 boinc boinc 223748310 May 25 03:48 ATLAS.root_0
[2025-05-25 05:20:01] -rw-------. 1 boinc boinc 203808334 May 25 05:19 HITS.pool.root.1
[2025-05-25 05:20:01] -rw-------. 1 boinc boinc    829440 May 25 05:20 result.tar.gz
05:20:02 (2051832): run_atlas exited; CPU time 28155.432228
05:20:02 (2051832): called boinc_finish(0)

</stderr_txt>
]]>

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