Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:31:25 (2078393): wrapper (7.7.26015): starting
04:31:25 (2078393): wrapper: running run_atlas (--nthreads 6)
[2025-05-25 04:31:25] Arguments: --nthreads 6
[2025-05-25 04:31:25] Threads: 6
[2025-05-25 04:31:25] Checking for CVMFS
[2025-05-25 04:31:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 04:31:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 04:31:25] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 04:31:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 04:31:26] 2.11.5.0 1578993 609 68504 146377 1 56 41410974 52428800 1858 130560 0 1374818 99.995 158951 99 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-05-25 04:31:26] CVMFS is ok
[2025-05-25 04:31:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 04:31:26] Checking for apptainer binary...
[2025-05-25 04:31:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 04:31:26] Running /usr/bin/apptainer --version
[2025-05-25 04:31:26] apptainer version 1.3.5-1.el9
[2025-05-25 04:31:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 04:31:26] testio008
[2025-05-25 04:31:26] apptainer works
[2025-05-25 04:31:26] Set ATHENA_PROC_NUMBER=6
[2025-05-25 04:31:26] Set ATHENA_CORE_NUMBER=6
[2025-05-25 04:31:26] Starting ATLAS job with PandaID=6665286027
[2025-05-25 04:31:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 05:56:20]  *** The last 200 lines of the pilot log: ***
[2025-05-25 05:56:20] 2025-05-24 20:55:28,031 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-25 05:56:20] 2025-05-24 20:55:28,031 | INFO     | log transfer has been attempted: DONE
[2025-05-25 05:56:20] 2025-05-24 20:55:28,031 | INFO     | job 6665286027 has finished - writing final server update
[2025-05-25 05:56:20] 2025-05-24 20:55:28,031 | INFO     | total number of processed events: 400 (read)
[2025-05-25 05:56:20] 2025-05-24 20:55:28,032 | INFO     | executing command: lscpu
[2025-05-25 05:56:20] 2025-05-24 20:55:28,043 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-25 05:56:20] 2025-05-24 20:55:30,473 | INFO     | monitor loop #372: job 0:6665286027 is in state 'finished'
[2025-05-25 05:56:20] 2025-05-24 20:55:30,473 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:56:20] 2025-05-24 20:55:32,976 | INFO     | monitor loop #373: job 0:6665286027 is in state 'finished'
[2025-05-25 05:56:20] 2025-05-24 20:55:32,976 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:56:20] 2025-05-24 20:55:35,479 | INFO     | monitor loop #374: job 0:6665286027 is in state 'finished'
[2025-05-25 05:56:20] 2025-05-24 20:55:35,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:56:20] 2025-05-24 20:55:37,981 | INFO     | monitor loop #375: job 0:6665286027 is in state 'finished'
[2025-05-25 05:56:20] 2025-05-24 20:55:37,981 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:56:20] 2025-05-24 20:55:40,484 | INFO     | monitor loop #376: job 0:6665286027 is in state 'finished'
[2025-05-25 05:56:20] 2025-05-24 20:55:40,484 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:56:20] 2025-05-24 20:55:42,987 | INFO     | monitor loop #377: job 0:6665286027 is in state 'finished'
[2025-05-25 05:56:20] 2025-05-24 20:55:42,987 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:56:20] 2025-05-24 20:55:45,432 | INFO     | PID=2082091 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 05:56:20] 2025-05-24 20:55:45,433 | INFO     | .. there are 3 such processes running
[2025-05-25 05:56:20] 2025-05-24 20:55:45,490 | INFO     | monitor loop #378: job 0:6665286027 is in state 'finished'
[2025-05-25 05:56:20] 2025-05-24 20:55:45,490 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:56:20] 2025-05-24 20:55:47,993 | INFO     | monitor loop #379: job 0:6665286027 is in state 'finished'
[2025-05-25 05:56:20] 2025-05-24 20:55:47,993 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:56:20] 2025-05-24 20:55:50,496 | INFO     | monitor loop #380: job 0:6665286027 is in state 'finished'
[2025-05-25 05:56:20] 2025-05-24 20:55:50,496 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:56:20] 2025-05-24 20:55:52,998 | INFO     | monitor loop #381: job 0:6665286027 is in state 'finished'
[2025-05-25 05:56:20] 2025-05-24 20:55:52,998 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:56:20] 2025-05-24 20:55:55,501 | INFO     | monitor loop #382: job 0:6665286027 is in state 'finished'
[2025-05-25 05:56:20] 2025-05-24 20:55:55,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:56:20] 2025-05-24 20:55:58,004 | INFO     | monitor loop #383: job 0:6665286027 is in state 'finished'
[2025-05-25 05:56:20] 2025-05-24 20:55:58,004 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:56:20] 2025-05-24 20:56:00,506 | INFO     | monitor loop #384: job 0:6665286027 is in state 'finished'
[2025-05-25 05:56:20] 2025-05-24 20:56:00,506 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:56:20] 2025-05-24 20:56:03,009 | INFO     | monitor loop #385: job 0:6665286027 is in state 'finished'
[2025-05-25 05:56:20] 2025-05-24 20:56:03,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:56:20] 2025-05-24 20:56:05,511 | INFO     | monitor loop #386: job 0:6665286027 is in state 'finished'
[2025-05-25 05:56:20] 2025-05-24 20:56:05,511 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:56:20] 2025-05-24 20:56:06,620 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 05:56:20] 2025-05-24 20:56:06,620 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6665286027/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 05:56:20] 2025-05-24 20:56:06,620 | INFO     | extracted standard info from prmon json
[2025-05-25 05:56:20] 2025-05-24 20:56:06,620 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 05:56:20] 2025-05-24 20:56:06,620 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 05:56:20] 2025-05-24 20:56:06,620 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 05:56:20] 2025-05-24 20:56:06,620 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 05:56:20] 2025-05-24 20:56:06,621 | INFO     | fitting pss+swap vs Time
[2025-05-25 05:56:20] 2025-05-24 20:56:06,621 | INFO     | sum of square deviations: 130793150.0
[2025-05-25 05:56:20] 2025-05-24 20:56:06,622 | INFO     | sum of deviations: 1200503485.0000002
[2025-05-25 05:56:20] 2025-05-24 20:56:06,622 | INFO     | mean x: 1748117692.0
[2025-05-25 05:56:20] 2025-05-24 20:56:06,622 | INFO     | mean y: 2531105.933333333
[2025-05-25 05:56:20] 2025-05-24 20:56:06,622 | INFO     | -- intersect: -16042815163.624033
[2025-05-25 05:56:20] 2025-05-24 20:56:06,622 | INFO     | intersect: -16042815163.624033
[2025-05-25 05:56:20] 2025-05-24 20:56:06,622 | INFO     | chi2: 1.4982366299426888
[2025-05-25 05:56:20] 2025-05-24 20:56:06,622 | INFO     | -- intersect: -16042815163.624033
[2025-05-25 05:56:20] 2025-05-24 20:56:06,622 | INFO     | current memory leak: 9.18 B/s (using 75 data points, chi2=1.50)
[2025-05-25 05:56:20] 2025-05-24 20:56:06,622 | INFO     | ..............................
[2025-05-25 05:56:20] 2025-05-24 20:56:06,622 | INFO     | . Timing measurements:
[2025-05-25 05:56:20] 2025-05-24 20:56:06,622 | INFO     | . get job = 0 s
[2025-05-25 05:56:20] 2025-05-24 20:56:06,622 | INFO     | . initial setup = 22 s
[2025-05-25 05:56:20] 2025-05-24 20:56:06,622 | INFO     | . payload setup = 2 s
[2025-05-25 05:56:20] 2025-05-24 20:56:06,622 | INFO     | . stage-in = 0 s
[2025-05-25 05:56:20] 2025-05-24 20:56:06,622 | INFO     | . payload execution = 4993 s
[2025-05-25 05:56:20] 2025-05-24 20:56:06,622 | INFO     | . stage-out = 0 s
[2025-05-25 05:56:20] 2025-05-24 20:56:06,622 | INFO     | . log creation = 0 s
[2025-05-25 05:56:20] 2025-05-24 20:56:06,622 | INFO     | ..............................
[2025-05-25 05:56:20] 2025-05-24 20:56:06,668 | INFO     | 
[2025-05-25 05:56:20] 2025-05-24 20:56:06,668 | INFO     | job summary report
[2025-05-25 05:56:20] 2025-05-24 20:56:06,668 | INFO     | --------------------------------------------------
[2025-05-25 05:56:20] 2025-05-24 20:56:06,668 | INFO     | PanDA job id: 6665286027
[2025-05-25 05:56:20] 2025-05-24 20:56:06,668 | INFO     | task id: 44871837
[2025-05-25 05:56:20] 2025-05-24 20:56:06,668 | INFO     | errors: (none)
[2025-05-25 05:56:20] 2025-05-24 20:56:06,668 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 05:56:20] 2025-05-24 20:56:06,668 | INFO     | pilot state: finished 
[2025-05-25 05:56:20] 2025-05-24 20:56:06,668 | INFO     | transexitcode: 0
[2025-05-25 05:56:20] 2025-05-24 20:56:06,668 | INFO     | exeerrorcode: 0
[2025-05-25 05:56:20] 2025-05-24 20:56:06,668 | INFO     | exeerrordiag: 
[2025-05-25 05:56:20] 2025-05-24 20:56:06,668 | INFO     | exitcode: 0
[2025-05-25 05:56:20] 2025-05-24 20:56:06,668 | INFO     | exitmsg: OK
[2025-05-25 05:56:20] 2025-05-24 20:56:06,668 | INFO     | cpuconsumptiontime: 25211 s
[2025-05-25 05:56:20] 2025-05-24 20:56:06,668 | INFO     | nevents: 400
[2025-05-25 05:56:20] 2025-05-24 20:56:06,668 | INFO     | neventsw: 0
[2025-05-25 05:56:20] 2025-05-24 20:56:06,668 | INFO     | pid: 2088631
[2025-05-25 05:56:20] 2025-05-24 20:56:06,668 | INFO     | pgrp: 2088631
[2025-05-25 05:56:20] 2025-05-24 20:56:06,668 | INFO     | corecount: 6
[2025-05-25 05:56:20] 2025-05-24 20:56:06,668 | INFO     | event service: False
[2025-05-25 05:56:20] 2025-05-24 20:56:06,669 | INFO     | sizes: {0: 2393569, 1: 2393768, 2: 2393974, 11: 2394002, 4999: 2420209, 5001: 2429152, 5003: 2429336, 5041: 2429506}
[2025-05-25 05:56:20] 2025-05-24 20:56:06,669 | INFO     | --------------------------------------------------
[2025-05-25 05:56:20] 2025-05-24 20:56:06,669 | INFO     | 
[2025-05-25 05:56:20] 2025-05-24 20:56:06,669 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-05-25 05:56:20] 2025-05-24 20:56:06,677 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 05:56:20] 2025-05-24 20:56:06,677 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 05:56:20] 2025-05-24 20:56:06,678 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 05:56:20] 2025-05-24 20:56:06,678 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 05:56:20] 2025-05-24 20:56:06,678 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 05:56:20] 2025-05-24 20:56:06,678 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 05:56:20] 2025-05-24 20:56:06,678 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 05:56:20] 2025-05-24 20:56:06,678 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 05:56:20] 2025-05-24 20:56:06,678 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 05:56:20] 2025-05-24 20:56:06,678 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 05:56:20] 2025-05-24 20:56:06,678 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 05:56:20] 2025-05-24 20:56:06,678 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 05:56:20] 2025-05-24 20:56:06,678 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 05:56:20] 2025-05-24 20:56:06,678 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 05:56:20] 2025-05-24 20:56:06,678 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 05:56:20] 2025-05-24 20:56:06,678 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 05:56:20] 2025-05-24 20:56:06,678 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 05:56:20] 2025-05-24 20:56:06,678 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 05:56:20] 2025-05-24 20:56:06,678 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 05:56:20] 2025-05-24 20:56:06,678 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 05:56:20] 2025-05-24 20:56:06,678 | INFO     | job 6665286027 has completed (purged errors)
[2025-05-25 05:56:20] 2025-05-24 20:56:06,678 | INFO     | overall cleanup function is called
[2025-05-25 05:56:20] 2025-05-24 20:56:07,529 | INFO     | PID=2082091 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 05:56:20] 2025-05-24 20:56:07,530 | INFO     | .. there are 3 such processes running
[2025-05-25 05:56:20] 2025-05-24 20:56:07,683 | INFO     | --- collectZombieJob: --- 10, [2088631]
[2025-05-25 05:56:20] 2025-05-24 20:56:07,683 | INFO     | zombie collector waiting for pid 2088631
[2025-05-25 05:56:20] 2025-05-24 20:56:07,683 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 05:56:20] 2025-05-24 20:56:07,683 | INFO     | collected zombie processes
[2025-05-25 05:56:20] 2025-05-24 20:56:07,683 | INFO     | will attempt to kill all subprocesses of pid=2088631
[2025-05-25 05:56:20] 2025-05-24 20:56:07,722 | INFO     | process IDs to be killed: [2088631] (in reverse order)
[2025-05-25 05:56:20] 2025-05-24 20:56:07,747 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 05:56:20] 2025-05-24 20:56:07,747 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 05:56:20] 2025-05-24 20:56:07,749 | INFO     | did not find any defunct processes belonging to 2088631
[2025-05-25 05:56:20] 2025-05-24 20:56:07,752 | INFO     | did not find any defunct processes belonging to 2088631
[2025-05-25 05:56:20] 2025-05-24 20:56:07,752 | INFO     | ready for new job
[2025-05-25 05:56:20] 2025-05-24 20:56:07,752 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 05:56:20] 2025-05-24 20:56:07,753 | INFO     | **************************************
[2025-05-25 05:56:20] 2025-05-24 20:56:07,753 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 05:56:20] 2025-05-24 20:56:07,753 | INFO     | **************************************
[2025-05-25 05:56:20] 2025-05-24 20:56:07,753 | INFO     | 
[2025-05-25 05:56:20] 2025-05-24 20:56:07,754 | INFO     | architecture information:
[2025-05-25 05:56:20] 2025-05-24 20:56:07,754 | INFO     | executing command: cat /etc/os-release
[2025-05-25 05:56:20] 2025-05-24 20:56:07,760 | INFO     | cat /etc/os-release:
[2025-05-25 05:56:20] NAME="CentOS Linux"
[2025-05-25 05:56:20] VERSION="7 (Core)"
[2025-05-25 05:56:20] ID="centos"
[2025-05-25 05:56:20] ID_LIKE="rhel fedora"
[2025-05-25 05:56:20] VERSION_ID="7"
[2025-05-25 05:56:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 05:56:20] ANSI_COLOR="0;31"
[2025-05-25 05:56:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 05:56:20] HOME_URL="https://www.centos.org/"
[2025-05-25 05:56:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 05:56:20] 
[2025-05-25 05:56:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 05:56:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 05:56:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 05:56:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 05:56:20] 
[2025-05-25 05:56:20] 2025-05-24 20:56:07,760 | INFO     | **************************************
[2025-05-25 05:56:20] 2025-05-24 20:56:08,262 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-05-25 05:56:20] 2025-05-24 20:56:08,269 | INFO     | sufficient remaining disk space (283443724288 B)
[2025-05-25 05:56:20] 2025-05-24 20:56:08,269 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 05:56:20] 2025-05-24 20:56:08,269 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 05:56:20] 2025-05-24 20:56:08,269 | INFO     | update_server=False
[2025-05-25 05:56:20] 2025-05-24 20:56:08,269 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 05:56:20] 2025-05-24 20:56:08,269 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 05:56:20] 2025-05-24 20:56:08,270 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 05:56:20] 2025-05-24 20:56:08,270 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 05:56:20] 2025-05-24 20:56:08,270 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 05:56:20] 2025-05-24 20:56:08,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 05:56:20] 2025-05-24 20:56:08,433 | INFO     | all payload control threads have been joined
[2025-05-25 05:56:20] 2025-05-24 20:56:08,598 | INFO     | all job control threads have been joined
[2025-05-25 05:56:20] 2025-05-24 20:56:08,695 | INFO     | all data control threads have been joined
[2025-05-25 05:56:20] 2025-05-24 20:56:09,019 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 05:56:20] 2025-05-24 20:56:09,019 | INFO     | aborting loop
[2025-05-25 05:56:20] 2025-05-24 20:56:09,154 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 05:56:20] 2025-05-24 20:56:09,274 | INFO     | [job] retrieve thread has finished
[2025-05-25 05:56:20] 2025-05-24 20:56:09,274 | INFO     | [job] queue monitor thread has finished
[2025-05-25 05:56:20] 2025-05-24 20:56:09,438 | INFO     | [payload] control thread has finished
[2025-05-25 05:56:20] 2025-05-24 20:56:09,603 | INFO     | [job] control thread has finished
[2025-05-25 05:56:20] 2025-05-24 20:56:09,700 | INFO     | [data] control thread has finished
[2025-05-25 05:56:20] 2025-05-24 20:56:10,024 | INFO     | [job] job monitor thread has finished
[2025-05-25 05:56:20] 2025-05-24 20:56:10,053 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 05:56:20] 2025-05-24 20:56:10,167 | INFO     | [job] validate thread has finished
[2025-05-25 05:56:20] 2025-05-24 20:56:10,167 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 05:56:20] 2025-05-24 20:56:10,183 | INFO     | [payload] validate_post thread has finished
[2025-05-25 05:56:20] 2025-05-24 20:56:10,293 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 05:56:20] 2025-05-24 20:56:10,351 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 05:56:20] 2025-05-24 20:56:10,409 | INFO     | [data] copytool_in thread has finished
[2025-05-25 05:56:20] 2025-05-24 20:56:10,429 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 05:56:20] 2025-05-24 20:56:10,788 | INFO     | [payload] failed_post thread has finished
[2025-05-25 05:56:20] 2025-05-24 20:56:11,159 | INFO     | [data] copytool_out thread has finished
[2025-05-25 05:56:20] 2025-05-24 20:56:14,058 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 05:56:20] 2025-05-24 20:56:15,659 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140181448484672)>', '<ExcThread(monitor, started 140180644144896)>']
[2025-05-25 05:56:20] 2025-05-24 20:56:16,307 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 05:56:20] 2025-05-24 20:56:16,307 | INFO     | [monitor] control thread has ended
[2025-05-25 05:56:20] 2025-05-24 20:56:20,676 | INFO     | all workflow threads have been joined
[2025-05-25 05:56:20] 2025-05-24 20:56:20,676 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 05:56:20] 2025-05-24 20:56:20,676 | INFO     | traces error code: 0
[2025-05-25 05:56:20] 2025-05-24 20:56:20,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 05:56:20] 2025-05-24 20:56:20,732 [wrapper] ==== pilot stdout END ====
[2025-05-25 05:56:20] 2025-05-24 20:56:20,737 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 05:56:20] 2025-05-24 20:56:20,738 [wrapper] pilotpid: 2082091
[2025-05-25 05:56:20] 2025-05-24 20:56:20,739 [wrapper] Pilot exit status: 0
[2025-05-25 05:56:20] 2025-05-24 20:56:20,743 [wrapper] pandaids: 6665286027
[2025-05-25 05:56:20] 2025-05-24 20:56:20,755 [wrapper] cleanup supervisor_pilot 2143315 2082092
[2025-05-25 05:56:20] 2025-05-24 20:56:20,756 [wrapper] Test setup, not cleaning
[2025-05-25 05:56:20] 2025-05-24 20:56:20,757 [wrapper] apfmon messages muted
[2025-05-25 05:56:20] 2025-05-24 20:56:20,758 [wrapper] ==== wrapper stdout END ====
[2025-05-25 05:56:20] 2025-05-24 20:56:20,759 [wrapper] ==== wrapper stderr END ====
[2025-05-25 05:56:20]  *** Error codes and diagnostics ***
[2025-05-25 05:56:20]     "exeErrorCode": 0,
[2025-05-25 05:56:20]     "exeErrorDiag": "",
[2025-05-25 05:56:20]     "pilotErrorCode": 0,
[2025-05-25 05:56:20]     "pilotErrorDiag": "",
[2025-05-25 05:56:20]  *** Listing of results directory ***
[2025-05-25 05:56:20] total 413872
[2025-05-25 05:56:20] -rw-r--r--. 1 boinc boinc    495897 May 24 16:50 pilot3.tar.gz
[2025-05-25 05:56:20] -rwx------. 1 boinc boinc     37140 May 24 17:10 runpilot2-wrapper.sh
[2025-05-25 05:56:20] -rw-r--r--. 1 boinc boinc      5111 May 24 17:10 queuedata.json
[2025-05-25 05:56:20] -rw-r--r--. 1 boinc boinc       100 May 25 04:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 05:56:20] -rwxr-xr-x. 1 boinc boinc      7986 May 25 04:31 run_atlas
[2025-05-25 05:56:20] -rw-r--r--. 1 boinc boinc       105 May 25 04:31 job.xml
[2025-05-25 05:56:20] -rw-r--r--. 2 boinc boinc 222750027 May 25 04:31 EVNT.44871834._000472.pool.root.1
[2025-05-25 05:56:20] -rw-r--r--. 2 boinc boinc     15093 May 25 04:31 start_atlas.sh
[2025-05-25 05:56:20] drwxrwx--x. 2 boinc boinc        68 May 25 04:31 shared
[2025-05-25 05:56:20] -rw-r--r--. 2 boinc boinc    508872 May 25 04:31 input.tar.gz
[2025-05-25 05:56:20] -rw-r--r--. 1 boinc boinc      9510 May 25 04:31 init_data.xml
[2025-05-25 05:56:20] -rw-r--r--. 1 boinc boinc         0 May 25 04:31 boinc_lockfile
[2025-05-25 05:56:20] -rw-r--r--. 1 boinc boinc      2558 May 25 04:31 pandaJob.out
[2025-05-25 05:56:20] -rw-------. 1 boinc boinc    988564 May 25 04:31 agis_schedconf.cvmfs.json
[2025-05-25 05:56:20] -rw-------. 1 boinc boinc   1596740 May 25 04:31 agis_ddmendpoints.agis.ALL.json
[2025-05-25 05:56:20] drwx------. 4 boinc boinc      4096 May 25 04:31 pilot3
[2025-05-25 05:56:20] -rw-------. 1 boinc boinc 195672098 May 25 05:54 HITS.44871837._011797.pool.root.1
[2025-05-25 05:56:20] -rw-r--r--. 1 boinc boinc       529 May 25 05:55 boinc_task_state.xml
[2025-05-25 05:56:20] -rw-------. 1 boinc boinc      1021 May 25 05:55 memory_monitor_summary.json
[2025-05-25 05:56:20] -rw-------. 1 boinc boinc    289518 May 25 05:55 log.44871837._011797.job.log.tgz.1
[2025-05-25 05:56:20] -rw-------. 1 boinc boinc      7668 May 25 05:56 heartbeat.json
[2025-05-25 05:56:20] -rw-------. 1 boinc boinc        95 May 25 05:56 pilot_heartbeat.json
[2025-05-25 05:56:20] -rw-r--r--. 1 boinc boinc        27 May 25 05:56 wrapper_checkpoint.txt
[2025-05-25 05:56:20] -rw-r--r--. 1 boinc boinc      8192 May 25 05:56 boinc_mmap_file
[2025-05-25 05:56:20] -rw-------. 1 boinc boinc      4478 May 25 05:56 pilotlog.txt
[2025-05-25 05:56:20] -rw-------. 1 boinc boinc    494355 May 25 05:56 log.44871837._011797.job.log.1
[2025-05-25 05:56:20] -rw-------. 1 boinc boinc       357 May 25 05:56 output.list
[2025-05-25 05:56:20] -rw-r--r--. 1 boinc boinc       620 May 25 05:56 runtime_log
[2025-05-25 05:56:20] -rw-------. 1 boinc boinc    798720 May 25 05:56 result.tar.gz
[2025-05-25 05:56:20] -rw-------. 1 boinc boinc       642 May 25 05:56 TXmNDmg8yc7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrXQKDm3mmGCn.diag
[2025-05-25 05:56:20] -rw-r--r--. 1 boinc boinc      8631 May 25 05:56 runtime_log.err
[2025-05-25 05:56:20] -rw-r--r--. 1 boinc boinc     22135 May 25 05:56 stderr.txt
[2025-05-25 05:56:20] HITS file was successfully produced:
[2025-05-25 05:56:20] -rw-------. 1 boinc boinc 195672098 May 25 05:54 shared/HITS.pool.root.1
[2025-05-25 05:56:20]  *** Contents of shared directory: ***
[2025-05-25 05:56:20] total 409916
[2025-05-25 05:56:20] -rw-r--r--. 2 boinc boinc 222750027 May 25 04:31 ATLAS.root_0
[2025-05-25 05:56:20] -rw-r--r--. 2 boinc boinc     15093 May 25 04:31 start_atlas.sh
[2025-05-25 05:56:20] -rw-r--r--. 2 boinc boinc    508872 May 25 04:31 input.tar.gz
[2025-05-25 05:56:20] -rw-------. 1 boinc boinc 195672098 May 25 05:54 HITS.pool.root.1
[2025-05-25 05:56:20] -rw-------. 1 boinc boinc    798720 May 25 05:56 result.tar.gz
05:56:22 (2078393): run_atlas exited; CPU time 25246.201585
05:56:22 (2078393): called boinc_finish(0)

</stderr_txt>
]]>

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