Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-24 17:26:25 (11724): Detected: vboxwrapper 26206
2025-05-24 17:26:25 (11724): Detected: BOINC client v7.20.2
2025-05-24 17:26:26 (11724): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-05-24 17:26:26 (11724): Successfully copied 'init_data.xml' to the shared directory.
2025-05-24 17:26:27 (11724): Create VM. (boinc_a58fea39f1920485, slot#5)
2025-05-24 17:26:27 (11724): Setting Memory Size for VM. (4800MB)
2025-05-24 17:26:27 (11724): Setting CPU Count for VM. (8)
2025-05-24 17:26:28 (11724): Setting Chipset Options for VM.
2025-05-24 17:26:28 (11724): Setting Graphics Controller Options for VM.
2025-05-24 17:26:28 (11724): Setting Boot Options for VM.
2025-05-24 17:26:28 (11724): Setting Network Configuration for NAT.
2025-05-24 17:26:29 (11724): Enabling VM Network Access.
2025-05-24 17:26:29 (11724): Disabling USB Support for VM.
2025-05-24 17:26:29 (11724): Disabling COM Port Support for VM.
2025-05-24 17:26:30 (11724): Disabling LPT Port Support for VM.
2025-05-24 17:26:30 (11724): Disabling Audio Support for VM.
2025-05-24 17:26:30 (11724): Disabling Clipboard Support for VM.
2025-05-24 17:26:31 (11724): Disabling Drag and Drop Support for VM.
2025-05-24 17:26:31 (11724): Adding storage controller(s) to VM.
2025-05-24 17:26:31 (11724): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-24 17:26:32 (11724): Adding VirtualBox Guest Additions to VM.
2025-05-24 17:26:32 (11724): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-24 17:26:32 (11724): forwarding host port 56952 to guest port 80
2025-05-24 17:26:32 (11724): Enabling remote desktop for VM.
2025-05-24 17:26:33 (11724): Required extension pack not installed, remote desktop not enabled.
2025-05-24 17:26:33 (11724): Enabling shared directory for VM.
2025-05-24 17:26:33 (11724): Starting VM using VBoxManage interface. (boinc_a58fea39f1920485, slot#5)
2025-05-24 17:26:38 (11724): Successfully started VM. (PID = '18456')
2025-05-24 17:26:38 (11724): Reporting VM Process ID to BOINC.
2025-05-24 17:26:38 (11724): Guest Log: BIOS: VirtualBox 6.0.14
2025-05-24 17:26:38 (11724): Guest Log: CPUID EDX: 0x178bfbff
2025-05-24 17:26:38 (11724): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-24 17:26:38 (11724): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-24 17:26:38 (11724): Detected: Web Application Enabled (http://localhost:56952)
2025-05-24 17:26:38 (11724): Preference change detected
2025-05-24 17:26:38 (11724): Setting CPU throttle for VM. (100%)
2025-05-24 17:26:38 (11724): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-24 17:26:40 (11724): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-24 17:26:40 (11724): Guest Log: BIOS: Booting from Hard Disk...
2025-05-24 17:26:43 (11724): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-24 17:26:43 (11724): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-24 17:26:43 (11724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-24 17:26:51 (11724): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-24 17:26:51 (11724): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-24 17:26:59 (11724): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-24 17:26:59 (11724): Guest Log: 00:00:00.000220 main     Log opened 2025-05-24T17:26:57.667682000Z
2025-05-24 17:26:59 (11724): Guest Log: 00:00:00.000343 main     OS Product: Linux
2025-05-24 17:26:59 (11724): Guest Log: 00:00:00.000419 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-24 17:26:59 (11724): Guest Log: 00:00:00.000477 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-24 17:26:59 (11724): Guest Log: 00:00:00.000555 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-24 17:26:59 (11724): Guest Log: 00:00:00.000557 main     Process ID: 1368
2025-05-24 17:26:59 (11724): Guest Log: 00:00:00.000558 main     Package type: LINUX_64BITS_GENERIC
2025-05-24 17:26:59 (11724): Guest Log: 00:00:00.002192 main     5.2.32 r132073 started. Verbose level = 0
2025-05-24 17:26:59 (11724): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-24 17:26:59 (11724): Guest Log: [INFO] Mounting shared directory
2025-05-24 17:27:00 (11724): Guest Log: [INFO] Checking for init_data.xml
2025-05-24 17:27:05 (11724): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-24 17:27:05 (11724): Guest Log: [INFO] Detected branch: prod
2025-05-24 17:27:06 (11724): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-24 17:27:06 (11724): Guest Log: Copying input files
2025-05-24 17:27:08 (11724): Guest Log: Copied input files into RunAtlas.
2025-05-24 17:27:08 (11724): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-24 17:27:08 (11724): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-24 17:27:08 (11724): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-24 17:27:08 (11724): Guest Log: Further information can be found at the LHC@home message board.
2025-05-24 17:27:09 (11724): Guest Log: 00:00:10.006979 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 489 732 000ns (GuestNow=1 748 100 429 181 840 000 ns GuestLast=1 748 107 617 671 572 000 ns fSetTimeLastLoop=true )
2025-05-24 17:27:16 (11724): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-24 17:27:17 (11724): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-24 17:27:17 (11724): Guest Log: 2.6.3.0 1662 0 32180 146372 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-24 17:27:19 (11724): Guest Log: copied the webapp to /var/www
2025-05-24 17:27:20 (11724): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-24 17:27:20 (11724): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-24 17:27:20 (11724): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-24 17:27:21 (11724): Guest Log:  *** Starting ATLAS job. (PandaID=6665288382 taskID=44871837) ***
2025-05-24 17:38:03 (11724): VM state change detected. (old = 'running', new = 'paused')
2025-05-24 17:38:13 (11724): VM state change detected. (old = 'paused', new = 'running')
2025-05-24 19:12:07 (11724): Status Report: Elapsed Time: '6000.825954'
2025-05-24 19:12:07 (11724): Status Report: CPU Time: '39219.640625'
2025-05-24 19:12:32 (11724): VM state change detected. (old = 'running', new = 'paused')
2025-05-24 19:12:40 (11724): VM state change detected. (old = 'paused', new = 'running')
2025-05-24 19:22:41 (11724): VM state change detected. (old = 'running', new = 'paused')
2025-05-24 19:22:52 (11724): VM state change detected. (old = 'paused', new = 'running')
2025-05-24 20:58:16 (11724): Status Report: Elapsed Time: '12001.387575'
2025-05-24 20:58:16 (11724): Status Report: CPU Time: '85481.390625'
2025-05-24 21:27:36 (11724): Guest Log:  *** Job finished ***
2025-05-24 21:27:36 (11724): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-24 21:27:36 (11724): Guest Log: 2025-05-24 19:27:01,561 | INFO     | [data] queue_monitor thread has finished
2025-05-24 21:27:36 (11724): Guest Log: 2025-05-24 19:27:07,663 | INFO     | job.realtimelogging is not enabled
2025-05-24 21:27:36 (11724): Guest Log: 2025-05-24 19:27:08,672 | INFO     | [payload] run_realtimelog thread has finished
2025-05-24 21:27:36 (11724): Guest Log: 2025-05-24 19:27:09,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139877386032960)>', '<ExcThread(monitor, started 139876800386816)>']
2025-05-24 21:27:36 (11724): Guest Log: 2025-05-24 19:27:09,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-24 21:27:36 (11724): Guest Log: 2025-05-24 19:27:09,623 | INFO     | [monitor] control thread has ended
2025-05-24 21:27:36 (11724): Guest Log: 2025-05-24 19:27:14,289 | INFO     | all workflow threads have been joined
2025-05-24 21:27:36 (11724): Guest Log: 2025-05-24 19:27:14,289 | INFO     | end of generic workflow (traces error code: 0)
2025-05-24 21:27:36 (11724): Guest Log: 2025-05-24 19:27:14,289 | INFO     | traces error code: 0
2025-05-24 21:27:36 (11724): Guest Log: 2025-05-24 19:27:14,290 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-24 21:27:36 (11724): Guest Log: 2025-05-24 19:27:14,386 [wrapper] ==== pilot stdout END ====
2025-05-24 21:27:36 (11724): Guest Log: 2025-05-24 19:27:14,392 [wrapper] ==== wrapper stdout RESUME ====
2025-05-24 21:27:36 (11724): Guest Log: 2025-05-24 19:27:14,400 [wrapper] pilotpid: 6007
2025-05-24 21:27:36 (11724): Guest Log: 2025-05-24 19:27:14,406 [wrapper] Pilot exit status: 0
2025-05-24 21:27:36 (11724): Guest Log: 2025-05-24 19:27:15,197 [wrapper] pandaids: 6665288382
2025-05-24 21:27:36 (11724): Guest Log: 2025-05-24 19:27:15,251 [wrapper] cleanup supervisor_pilot 12938 6008
2025-05-24 21:27:36 (11724): Guest Log: 2025-05-24 19:27:15,259 [wrapper] Test setup, not cleaning
2025-05-24 21:27:36 (11724): Guest Log: 2025-05-24 19:27:15,269 [wrapper] apfmon messages muted
2025-05-24 21:27:36 (11724): Guest Log: 2025-05-24 19:27:15,277 [wrapper] ==== wrapper stdout END ====
2025-05-24 21:27:36 (11724): Guest Log: 2025-05-24 19:27:15,285 [wrapper] ==== wrapper stderr END ====
2025-05-24 21:27:36 (11724): Guest Log:  *** Error codes and diagnostics ***
2025-05-24 21:27:36 (11724): Guest Log:     "exeErrorCode": 0,
2025-05-24 21:27:36 (11724): Guest Log:     "exeErrorDiag": "",
2025-05-24 21:27:36 (11724): Guest Log:     "pilotErrorCode": 0,
2025-05-24 21:27:36 (11724): Guest Log:     "pilotErrorDiag": "",
2025-05-24 21:27:36 (11724): Guest Log:  *** Listing of results directory ***
2025-05-24 21:27:36 (11724): Guest Log: total 198476
2025-05-24 21:27:36 (11724): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 24 08:24 pilot3.tar.gz
2025-05-24 21:27:36 (11724): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 24 08:28 queuedata.json
2025-05-24 21:27:36 (11724): Guest Log: -rwx------. 1 atlas atlas     37140 May 24 08:29 runpilot2-wrapper.sh
2025-05-24 21:27:36 (11724): Guest Log: -rwxr-xr-x. 1 atlas atlas     10878 May 24 15:27 init_data.xml
2025-05-24 21:27:36 (11724): Guest Log: -rwxr-xr-x. 1 atlas atlas    508877 May 24 15:27 input.tar.gz
2025-05-24 21:27:36 (11724): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 24 15:27 start_atlas.sh
2025-05-24 21:27:36 (11724): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 24 15:27 EVNT.44871834._000499.pool.root.1 -> /data/./ATLAS.root_0
2025-05-24 21:27:36 (11724): Guest Log: -rw-r--r--. 1 atlas atlas      2557 May 24 15:27 pandaJob.out
2025-05-24 21:27:36 (11724): Guest Log: -rw-------. 1 atlas atlas    988548 May 24 15:29 agis_schedconf.cvmfs.json
2025-05-24 21:27:36 (11724): Guest Log: drwx------. 4 atlas atlas      4096 May 24 15:30 pilot3
2025-05-24 21:27:36 (11724): Guest Log: -rw-------. 1 atlas atlas        95 May 24 19:26 pilot_heartbeat.json
2025-05-24 21:27:36 (11724): Guest Log: -rw-------. 1 atlas atlas 196423181 May 24 19:26 HITS.44871837._012465.pool.root.1
2025-05-24 21:27:36 (11724): Guest Log: -rw-------. 1 atlas atlas      1036 May 24 19:26 memory_monitor_summary.json
2025-05-24 21:27:36 (11724): Guest Log: -rw-------. 1 atlas atlas   1596740 May 24 19:26 agis_ddmendpoints.agis.ALL.json
2025-05-24 21:27:36 (11724): Guest Log: -rw-------. 1 atlas atlas    385538 May 24 19:26 log.44871837._012465.job.log.tgz.1
2025-05-24 21:27:36 (11724): Guest Log: -rw-------. 1 atlas atlas      7734 May 24 19:26 heartbeat.json
2025-05-24 21:27:36 (11724): Guest Log: -rw-------. 1 atlas atlas      4608 May 24 19:27 pilotlog.txt
2025-05-24 21:27:36 (11724): Guest Log: -rw-------. 1 atlas atlas   1141874 May 24 19:27 log.44871837._012465.job.log.1
2025-05-24 21:27:36 (11724): Guest Log: -rw-------. 1 atlas atlas       357 May 24 19:27 output.list
2025-05-24 21:27:36 (11724): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 24 19:27 runtime_log
2025-05-24 21:27:36 (11724): Guest Log: -rw-------. 1 atlas atlas   1546240 May 24 19:27 result.tar.gz
2025-05-24 21:27:36 (11724): Guest Log: -rw-r--r--. 1 atlas atlas      8602 May 24 19:27 runtime_log.err
2025-05-24 21:27:36 (11724): Guest Log: -rw-------. 1 atlas atlas       662 May 24 19:27 IUzKDmwQzc7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmydQKDm1ODIbm.diag
2025-05-24 21:27:36 (11724): Guest Log: Looking for outputfile HITS.44871837._012465.pool.root.1
2025-05-24 21:27:36 (11724): Guest Log: HITS file was successfully produced
2025-05-24 21:27:36 (11724): Guest Log: -rw-------. 1 atlas atlas 196423181 May 24 19:26 /home/atlas/RunAtlas/HITS.44871837._012465.pool.root.1
2025-05-24 21:27:37 (11724): Guest Log: Successfully finished the ATLAS job!
2025-05-24 21:27:37 (11724): Guest Log: Copying the results back to the shared directory!
2025-05-24 21:27:37 (11724): Guest Log:  *** Contents of shared directory: ***
2025-05-24 21:27:37 (11724): Guest Log: total 412196
2025-05-24 21:27:37 (11724): Guest Log: -rwxrwxrwx. 1 root root 223574679 May 24 15:26 ATLAS.root_0
2025-05-24 21:27:37 (11724): Guest Log: -rwxrwxrwx. 1 root root 196423181 May 24  2025 HITS.pool.root.1
2025-05-24 21:27:37 (11724): Guest Log: -rwxrwxrwx. 1 root root     10878 May 24 15:26 init_data.xml
2025-05-24 21:27:37 (11724): Guest Log: -rwxrwxrwx. 1 root root    508877 May 24 15:26 input.tar.gz
2025-05-24 21:27:37 (11724): Guest Log: -rwxrwxrwx. 1 root root   1546240 May 24  2025 result.tar.gz
2025-05-24 21:27:37 (11724): Guest Log: -rwxrwxrwx. 1 root root     15093 May 24 15:26 start_atlas.sh
2025-05-24 21:27:37 (11724): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-24 21:27:38 (11724): VM Completion File Detected.
2025-05-24 21:27:38 (11724): Powering off VM.
2025-05-24 21:27:39 (11724): Successfully stopped VM.
2025-05-24 21:27:39 (11724): Deregistering VM. (boinc_a58fea39f1920485, slot#5)
2025-05-24 21:27:39 (11724): Removing network bandwidth throttle group from VM.
2025-05-24 21:27:39 (11724): Removing VM from VirtualBox.
21:27:45 (11724): called boinc_finish(0)

</stderr_txt>
]]>

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