Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:30:48 (344425): wrapper (7.7.26015): starting
17:30:48 (344425): wrapper: running run_atlas (--nthreads 4)
[2025-05-24 17:30:48] Arguments: --nthreads 4
[2025-05-24 17:30:48] Threads: 4
[2025-05-24 17:30:48] Checking for CVMFS
[2025-05-24 17:30:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 17:30:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 17:30:48] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 17:30:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 17:30:49] 2.12.7.0 60297 488 56624 146371 0 56 9160564 10240001 1822 130560 0 780786 99.343 609308 385 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-05-24 17:30:49] CVMFS is ok
[2025-05-24 17:30:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 17:30:49] Checking for apptainer binary...
[2025-05-24 17:30:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 17:30:49] Running /usr/bin/apptainer --version
[2025-05-24 17:30:49] apptainer version 1.3.4
[2025-05-24 17:30:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 17:30:49] atlas7l2
[2025-05-24 17:30:49] apptainer works
[2025-05-24 17:30:49] Set ATHENA_PROC_NUMBER=4
[2025-05-24 17:30:49] Set ATHENA_CORE_NUMBER=4
[2025-05-24 17:30:49] Starting ATLAS job with PandaID=6665379790
[2025-05-24 17:30:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 19:21:41]  *** The last 200 lines of the pilot log: ***
[2025-05-24 19:21:41] 2025-05-24 17:21:28,520 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6665379790/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 19:21:41] 2025-05-24 17:21:28,520 | INFO     | extracted standard info from prmon json
[2025-05-24 19:21:41] 2025-05-24 17:21:28,520 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 19:21:41] 2025-05-24 17:21:28,520 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 19:21:41] 2025-05-24 17:21:28,521 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 19:21:41] 2025-05-24 17:21:28,521 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 19:21:41] 2025-05-24 17:21:28,522 | INFO     | fitting pss+swap vs Time
[2025-05-24 19:21:41] 2025-05-24 17:21:28,522 | INFO     | sum of square deviations: 401533110.0
[2025-05-24 19:21:41] 2025-05-24 17:21:28,522 | INFO     | sum of deviations: 749321925.9999886
[2025-05-24 19:21:41] 2025-05-24 17:21:28,523 | INFO     | mean x: 1748103971.0
[2025-05-24 19:21:41] 2025-05-24 17:21:28,523 | INFO     | mean y: 2321691.770642202
[2025-05-24 19:21:41] 2025-05-24 17:21:28,523 | INFO     | -- intersect: -3259906507.5376244
[2025-05-24 19:21:41] 2025-05-24 17:21:28,523 | INFO     | intersect: -3259906507.5376244
[2025-05-24 19:21:41] 2025-05-24 17:21:28,523 | INFO     | chi2: 2.4843193581833027
[2025-05-24 19:21:41] 2025-05-24 17:21:28,523 | INFO     | sum of square deviations: 348769330.0
[2025-05-24 19:21:41] 2025-05-24 17:21:28,523 | INFO     | sum of deviations: 7121031694.500002
[2025-05-24 19:21:41] 2025-05-24 17:21:28,523 | INFO     | mean x: 1748103818.5
[2025-05-24 19:21:41] 2025-05-24 17:21:28,523 | INFO     | mean y: 2339445.8365384615
[2025-05-24 19:21:41] 2025-05-24 17:21:28,523 | INFO     | -- intersect: -35689740178.294914
[2025-05-24 19:21:41] 2025-05-24 17:21:28,523 | INFO     | intersect: -35689740178.294914
[2025-05-24 19:21:41] 2025-05-24 17:21:28,524 | INFO     | chi2: 1.8425692244325076
[2025-05-24 19:21:41] 2025-05-24 17:21:28,524 | INFO     | current chi2=1.8425692244325076 (change=25.83203047695466 %)
[2025-05-24 19:21:41] 2025-05-24 17:21:28,524 | INFO     | sum of square deviations: 300842850.0
[2025-05-24 19:21:41] 2025-05-24 17:21:28,524 | INFO     | sum of deviations: 7159523030.0
[2025-05-24 19:21:41] 2025-05-24 17:21:28,524 | INFO     | mean x: 1748103666.0
[2025-05-24 19:21:41] 2025-05-24 17:21:28,524 | INFO     | mean y: 2339568.414141414
[2025-05-24 19:21:41] 2025-05-24 17:21:28,524 | INFO     | -- intersect: -41599408505.553474
[2025-05-24 19:21:41] 2025-05-24 17:21:28,524 | INFO     | intersect: -41599408505.553474
[2025-05-24 19:21:41] 2025-05-24 17:21:28,524 | INFO     | chi2: 1.8474354258034134
[2025-05-24 19:21:41] 2025-05-24 17:21:28,524 | INFO     | current chi2=1.8474354258034134 (change=-0.2640987001399909 %)
[2025-05-24 19:21:41] 2025-05-24 17:21:28,524 | INFO     | right removable region: 98
[2025-05-24 19:21:41] 2025-05-24 17:21:28,525 | INFO     | sum of square deviations: 348769330.0
[2025-05-24 19:21:41] 2025-05-24 17:21:28,525 | INFO     | sum of deviations: -16993212768.499996
[2025-05-24 19:21:41] 2025-05-24 17:21:28,525 | INFO     | mean x: 1748104123.5
[2025-05-24 19:21:41] 2025-05-24 17:21:28,525 | INFO     | mean y: 2372010.278846154
[2025-05-24 19:21:41] 2025-05-24 17:21:28,525 | INFO     | -- intersect: 85175874256.3843
[2025-05-24 19:21:41] 2025-05-24 17:21:28,525 | INFO     | intersect: 85175874256.3843
[2025-05-24 19:21:41] 2025-05-24 17:21:28,525 | INFO     | chi2: 0.6994561157772737
[2025-05-24 19:21:41] 2025-05-24 17:21:28,525 | INFO     | current chi2=0.6994561157772737 (change=71.84516099054343 %)
[2025-05-24 19:21:41] 2025-05-24 17:21:28,525 | INFO     | sum of square deviations: 300842850.0
[2025-05-24 19:21:41] 2025-05-24 17:21:28,525 | INFO     | sum of deviations: -15519465365.000004
[2025-05-24 19:21:41] 2025-05-24 17:21:28,526 | INFO     | mean x: 1748104276.0
[2025-05-24 19:21:41] 2025-05-24 17:21:28,526 | INFO     | mean y: 2367292.8484848486
[2025-05-24 19:21:41] 2025-05-24 17:21:28,526 | INFO     | -- intersect: 90181155872.30254
[2025-05-24 19:21:41] 2025-05-24 17:21:28,526 | INFO     | intersect: 90181155872.30254
[2025-05-24 19:21:41] 2025-05-24 17:21:28,526 | INFO     | chi2: 0.6995812454702605
[2025-05-24 19:21:41] 2025-05-24 17:21:28,526 | INFO     | current chi2=0.6995812454702605 (change=-0.01788957021952324 %)
[2025-05-24 19:21:41] 2025-05-24 17:21:28,526 | INFO     | left removable region: 20
[2025-05-24 19:21:41] 2025-05-24 17:21:28,526 | INFO     | sum of square deviations: 147126479.5
[2025-05-24 19:21:41] 2025-05-24 17:21:28,526 | INFO     | sum of deviations: -5299905822.000001
[2025-05-24 19:21:41] 2025-05-24 17:21:28,526 | INFO     | mean x: 1748104245.5
[2025-05-24 19:21:41] 2025-05-24 17:21:28,526 | INFO     | mean y: 2379422.9743589745
[2025-05-24 19:21:41] 2025-05-24 17:21:28,526 | INFO     | -- intersect: 62973966180.668564
[2025-05-24 19:21:41] 2025-05-24 17:21:28,526 | INFO     | intersect: 62973966180.668564
[2025-05-24 19:21:41] 2025-05-24 17:21:28,527 | INFO     | chi2: 0.01281616246167423
[2025-05-24 19:21:41] 2025-05-24 17:21:28,527 | INFO     | -- intersect: 62973966180.668564
[2025-05-24 19:21:41] 2025-05-24 17:21:28,527 | INFO     | current memory leak: -36.02 B/s (using 78 data points, chi2=0.01)
[2025-05-24 19:21:41] 2025-05-24 17:21:28,527 | INFO     | ..............................
[2025-05-24 19:21:41] 2025-05-24 17:21:28,527 | INFO     | . Timing measurements:
[2025-05-24 19:21:41] 2025-05-24 17:21:28,527 | INFO     | . get job = 0 s
[2025-05-24 19:21:41] 2025-05-24 17:21:28,527 | INFO     | . initial setup = 1 s
[2025-05-24 19:21:41] 2025-05-24 17:21:28,527 | INFO     | . payload setup = 3 s
[2025-05-24 19:21:41] 2025-05-24 17:21:28,527 | INFO     | . stage-in = 0 s
[2025-05-24 19:21:41] 2025-05-24 17:21:28,527 | INFO     | . payload execution = 6606 s
[2025-05-24 19:21:41] 2025-05-24 17:21:28,527 | INFO     | . stage-out = 0 s
[2025-05-24 19:21:41] 2025-05-24 17:21:28,527 | INFO     | . log creation = 0 s
[2025-05-24 19:21:41] 2025-05-24 17:21:28,527 | INFO     | ..............................
[2025-05-24 19:21:41] 2025-05-24 17:21:29,023 | INFO     | 
[2025-05-24 19:21:41] 2025-05-24 17:21:29,023 | INFO     | job summary report
[2025-05-24 19:21:41] 2025-05-24 17:21:29,023 | INFO     | --------------------------------------------------
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | PanDA job id: 6665379790
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | task id: 44871837
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | errors: (none)
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | pilot state: finished 
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | transexitcode: 0
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | exeerrorcode: 0
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | exeerrordiag: 
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | exitcode: 0
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | exitmsg: OK
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | cpuconsumptiontime: 25314 s
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | nevents: 400
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | neventsw: 0
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | pid: 354704
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | pgrp: 354704
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | corecount: 4
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | event service: False
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | sizes: {0: 2393753, 1: 2393753, 3: 2393987, 11: 2394015, 6613: 2430044, 6614: 2430044, 6618: 2430342}
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | --------------------------------------------------
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | 
[2025-05-24 19:21:41] 2025-05-24 17:21:29,024 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2025-05-24 19:21:41] 2025-05-24 17:21:29,036 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 19:21:41] 2025-05-24 17:21:29,036 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 19:21:41] 2025-05-24 17:21:29,036 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 19:21:41] 2025-05-24 17:21:29,036 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 19:21:41] 2025-05-24 17:21:29,036 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 19:21:41] 2025-05-24 17:21:29,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 19:21:41] 2025-05-24 17:21:29,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 19:21:41] 2025-05-24 17:21:29,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 19:21:41] 2025-05-24 17:21:29,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 19:21:41] 2025-05-24 17:21:29,037 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 19:21:41] 2025-05-24 17:21:29,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 19:21:41] 2025-05-24 17:21:29,037 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 19:21:41] 2025-05-24 17:21:29,037 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 19:21:41] 2025-05-24 17:21:29,037 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 19:21:41] 2025-05-24 17:21:29,037 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 19:21:41] 2025-05-24 17:21:29,037 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 19:21:41] 2025-05-24 17:21:29,037 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 19:21:41] 2025-05-24 17:21:29,037 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 19:21:41] 2025-05-24 17:21:29,037 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 19:21:41] 2025-05-24 17:21:29,037 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 19:21:41] 2025-05-24 17:21:29,037 | INFO     | job 6665379790 has completed (purged errors)
[2025-05-24 19:21:41] 2025-05-24 17:21:29,037 | INFO     | overall cleanup function is called
[2025-05-24 19:21:41] 2025-05-24 17:21:30,041 | INFO     | --- collectZombieJob: --- 10, [354704]
[2025-05-24 19:21:41] 2025-05-24 17:21:30,041 | INFO     | zombie collector waiting for pid 354704
[2025-05-24 19:21:41] 2025-05-24 17:21:30,042 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 19:21:41] 2025-05-24 17:21:30,042 | INFO     | collected zombie processes
[2025-05-24 19:21:41] 2025-05-24 17:21:30,042 | INFO     | will attempt to kill all subprocesses of pid=354704
[2025-05-24 19:21:41] 2025-05-24 17:21:30,129 | INFO     | process IDs to be killed: [354704] (in reverse order)
[2025-05-24 19:21:41] 2025-05-24 17:21:30,157 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 19:21:41] 2025-05-24 17:21:30,157 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 19:21:41] 2025-05-24 17:21:30,160 | INFO     | did not find any defunct processes belonging to 354704
[2025-05-24 19:21:41] 2025-05-24 17:21:30,162 | INFO     | did not find any defunct processes belonging to 354704
[2025-05-24 19:21:41] 2025-05-24 17:21:30,162 | INFO     | ready for new job
[2025-05-24 19:21:41] 2025-05-24 17:21:30,162 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 19:21:41] 2025-05-24 17:21:30,163 | INFO     | **************************************
[2025-05-24 19:21:41] 2025-05-24 17:21:30,163 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 19:21:41] 2025-05-24 17:21:30,163 | INFO     | **************************************
[2025-05-24 19:21:41] 2025-05-24 17:21:30,163 | INFO     | 
[2025-05-24 19:21:41] 2025-05-24 17:21:30,163 | INFO     | pilot is running in a VM
[2025-05-24 19:21:41] 2025-05-24 17:21:30,164 | INFO     | architecture information:
[2025-05-24 19:21:41] 2025-05-24 17:21:30,164 | INFO     | executing command: cat /etc/os-release
[2025-05-24 19:21:41] 2025-05-24 17:21:30,171 | INFO     | cat /etc/os-release:
[2025-05-24 19:21:41] NAME="CentOS Linux"
[2025-05-24 19:21:41] VERSION="7 (Core)"
[2025-05-24 19:21:41] ID="centos"
[2025-05-24 19:21:41] ID_LIKE="rhel fedora"
[2025-05-24 19:21:41] VERSION_ID="7"
[2025-05-24 19:21:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 19:21:41] ANSI_COLOR="0;31"
[2025-05-24 19:21:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 19:21:41] HOME_URL="https://www.centos.org/"
[2025-05-24 19:21:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 19:21:41] 
[2025-05-24 19:21:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 19:21:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 19:21:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 19:21:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 19:21:41] 
[2025-05-24 19:21:41] 2025-05-24 17:21:30,171 | INFO     | **************************************
[2025-05-24 19:21:41] 2025-05-24 17:21:30,674 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2025-05-24 19:21:41] 2025-05-24 17:21:30,683 | INFO     | sufficient remaining disk space (28878831616 B)
[2025-05-24 19:21:41] 2025-05-24 17:21:30,683 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 19:21:41] 2025-05-24 17:21:30,683 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 19:21:41] 2025-05-24 17:21:30,683 | INFO     | update_server=False
[2025-05-24 19:21:41] 2025-05-24 17:21:30,683 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 19:21:41] 2025-05-24 17:21:30,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 19:21:41] 2025-05-24 17:21:30,683 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 19:21:41] 2025-05-24 17:21:30,684 | INFO     | aborting loop
[2025-05-24 19:21:41] 2025-05-24 17:21:31,138 | INFO     | all payload control threads have been joined
[2025-05-24 19:21:41] 2025-05-24 17:21:31,350 | INFO     | all data control threads have been joined
[2025-05-24 19:21:41] 2025-05-24 17:21:31,523 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 19:21:41] 2025-05-24 17:21:31,524 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 19:21:41] 2025-05-24 17:21:31,524 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 19:21:41] 2025-05-24 17:21:31,688 | INFO     | [job] retrieve thread has finished
[2025-05-24 19:21:41] 2025-05-24 17:21:31,689 | INFO     | [job] job monitor thread has finished
[2025-05-24 19:21:41] 2025-05-24 17:21:31,757 | INFO     | [job] validate thread has finished
[2025-05-24 19:21:41] 2025-05-24 17:21:31,801 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 19:21:41] 2025-05-24 17:21:31,819 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 19:21:41] 2025-05-24 17:21:31,832 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 19:21:41] 2025-05-24 17:21:32,084 | INFO     | all job control threads have been joined
[2025-05-24 19:21:41] 2025-05-24 17:21:32,143 | INFO     | [payload] control thread has finished
[2025-05-24 19:21:41] 2025-05-24 17:21:32,347 | INFO     | [payload] validate_post thread has finished
[2025-05-24 19:21:41] 2025-05-24 17:21:32,356 | INFO     | [data] control thread has finished
[2025-05-24 19:21:41] 2025-05-24 17:21:32,523 | INFO     | [payload] failed_post thread has finished
[2025-05-24 19:21:41] 2025-05-24 17:21:32,593 | INFO     | [data] copytool_in thread has finished
[2025-05-24 19:21:41] 2025-05-24 17:21:33,043 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 19:21:41] 2025-05-24 17:21:33,089 | INFO     | [job] control thread has finished
[2025-05-24 19:21:41] 2025-05-24 17:21:33,151 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 19:21:41] 2025-05-24 17:21:33,587 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 19:21:41] 2025-05-24 17:21:33,837 | INFO     | [data] copytool_out thread has finished
[2025-05-24 19:21:41] 2025-05-24 17:21:34,593 | INFO     | [job] queue monitor thread has finished
[2025-05-24 19:21:41] 2025-05-24 17:21:34,689 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 19:21:41] 2025-05-24 17:21:35,790 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127714185271104)>', '<ExcThread(monitor, started 127713822086912)>']
[2025-05-24 19:21:41] 2025-05-24 17:21:36,541 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 19:21:41] 2025-05-24 17:21:36,542 | INFO     | [monitor] control thread has ended
[2025-05-24 19:21:41] 2025-05-24 17:21:40,812 | INFO     | all workflow threads have been joined
[2025-05-24 19:21:41] 2025-05-24 17:21:40,812 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 19:21:41] 2025-05-24 17:21:40,812 | INFO     | traces error code: 0
[2025-05-24 19:21:41] 2025-05-24 17:21:40,812 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 19:21:41] 2025-05-24 17:21:40,887 [wrapper] ==== pilot stdout END ====
[2025-05-24 19:21:41] 2025-05-24 17:21:40,889 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 19:21:41] 2025-05-24 17:21:40,893 [wrapper] pilotpid: 348124
[2025-05-24 19:21:41] 2025-05-24 17:21:40,895 [wrapper] Pilot exit status: 0
[2025-05-24 19:21:41] 2025-05-24 17:21:40,907 [wrapper] pandaids: 6665379790
[2025-05-24 19:21:41] 2025-05-24 17:21:40,931 [wrapper] cleanup supervisor_pilot  417988 348125
[2025-05-24 19:21:41] 2025-05-24 17:21:40,934 [wrapper] Test setup, not cleaning
[2025-05-24 19:21:41] 2025-05-24 17:21:40,939 [wrapper] apfmon messages muted
[2025-05-24 19:21:41] 2025-05-24 17:21:40,946 [wrapper] ==== wrapper stdout END ====
[2025-05-24 19:21:41] 2025-05-24 17:21:40,950 [wrapper] ==== wrapper stderr END ====
[2025-05-24 19:21:41]  *** Error codes and diagnostics ***
[2025-05-24 19:21:41]     "exeErrorCode": 0,
[2025-05-24 19:21:41]     "exeErrorDiag": "",
[2025-05-24 19:21:41]     "pilotErrorCode": 0,
[2025-05-24 19:21:41]     "pilotErrorDiag": "",
[2025-05-24 19:21:41]  *** Listing of results directory ***
[2025-05-24 19:21:41] insgesamt 418428
[2025-05-24 19:21:41] -rw-r--r-- 1 yeti boinc    495897 Mai 24 12:13 pilot3.tar.gz
[2025-05-24 19:21:41] -rwx------ 1 yeti boinc     37140 Mai 24 12:24 runpilot2-wrapper.sh
[2025-05-24 19:21:41] -rw-r--r-- 1 yeti boinc      5111 Mai 24 12:24 queuedata.json
[2025-05-24 19:21:41] -rw-r--r-- 1 yeti boinc       100 Mai 24 17:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 19:21:41] -rwxr-xr-x 1 yeti boinc      7986 Mai 24 17:30 run_atlas
[2025-05-24 19:21:41] -rw-r--r-- 1 yeti boinc       105 Mai 24 17:30 job.xml
[2025-05-24 19:21:41] -rw-r--r-- 2 yeti boinc 226386476 Mai 24 17:30 EVNT.44871834._000618.pool.root.1
[2025-05-24 19:21:41] -rw-r--r-- 2 yeti boinc     15093 Mai 24 17:30 start_atlas.sh
[2025-05-24 19:21:41] drwxrwx--x 2 yeti boinc      4096 Mai 24 17:30 shared
[2025-05-24 19:21:41] -rw-r--r-- 2 yeti boinc    508874 Mai 24 17:30 input.tar.gz
[2025-05-24 19:21:41] -rw-r--r-- 1 yeti boinc      6648 Mai 24 17:30 init_data.xml
[2025-05-24 19:21:41] -rw-r--r-- 1 yeti boinc         0 Mai 24 17:30 boinc_setup_complete
[2025-05-24 19:21:41] -rw-r--r-- 1 yeti boinc         0 Mai 24 17:30 boinc_lockfile
[2025-05-24 19:21:41] -rw-r--r-- 1 yeti boinc      2558 Mai 24 17:30 pandaJob.out
[2025-05-24 19:21:41] -rw------- 1 yeti boinc    988556 Mai 24 17:30 agis_schedconf.cvmfs.json
[2025-05-24 19:21:41] -rw------- 1 yeti boinc   1596740 Mai 24 17:30 agis_ddmendpoints.agis.ALL.json
[2025-05-24 19:21:41] drwx------ 4 yeti boinc      4096 Mai 24 17:30 pilot3
[2025-05-24 19:21:41] -rw------- 1 yeti boinc        95 Mai 24 19:20 pilot_heartbeat.json
[2025-05-24 19:21:41] -rw------- 1 yeti boinc 196421330 Mai 24 19:20 HITS.44871837._015439.pool.root.1
[2025-05-24 19:21:41] -rw-r--r-- 1 yeti boinc       529 Mai 24 19:20 boinc_task_state.xml
[2025-05-24 19:21:41] -rw------- 1 yeti boinc      1024 Mai 24 19:21 memory_monitor_summary.json
[2025-05-24 19:21:41] -rw------- 1 yeti boinc    257327 Mai 24 19:21 log.44871837._015439.job.log.tgz.1
[2025-05-24 19:21:41] -rw-r--r-- 1 yeti boinc      8192 Mai 24 19:21 boinc_mmap_file
[2025-05-24 19:21:41] -rw-r--r-- 1 yeti boinc        27 Mai 24 19:21 wrapper_checkpoint.txt
[2025-05-24 19:21:41] -rw------- 1 yeti boinc      7671 Mai 24 19:21 heartbeat.json
[2025-05-24 19:21:41] -rw------- 1 yeti boinc      4429 Mai 24 19:21 pilotlog.txt
[2025-05-24 19:21:41] -rw------- 1 yeti boinc    656868 Mai 24 19:21 log.44871837._015439.job.log.1
[2025-05-24 19:21:41] -rw------- 1 yeti boinc       357 Mai 24 19:21 output.list
[2025-05-24 19:21:41] -rw-r--r-- 1 yeti boinc       620 Mai 24 19:21 runtime_log
[2025-05-24 19:21:41] -rw------- 1 yeti boinc    931840 Mai 24 19:21 result.tar.gz
[2025-05-24 19:21:41] -rw-r--r-- 1 yeti boinc      8831 Mai 24 19:21 runtime_log.err
[2025-05-24 19:21:41] -rw------- 1 yeti boinc       639 Mai 24 19:21 GCDMDmnE1c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmI9QKDm2FPpym.diag
[2025-05-24 19:21:41] -rw-r--r-- 1 yeti boinc     20509 Mai 24 19:21 stderr.txt
[2025-05-24 19:21:41] HITS file was successfully produced:
[2025-05-24 19:21:41] -rw------- 1 yeti boinc 196421330 Mai 24 19:20 shared/HITS.pool.root.1
[2025-05-24 19:21:41]  *** Contents of shared directory: ***
[2025-05-24 19:21:41] insgesamt 414340
[2025-05-24 19:21:41] -rw-r--r-- 2 yeti boinc 226386476 Mai 24 17:30 ATLAS.root_0
[2025-05-24 19:21:41] -rw-r--r-- 2 yeti boinc     15093 Mai 24 17:30 start_atlas.sh
[2025-05-24 19:21:41] -rw-r--r-- 2 yeti boinc    508874 Mai 24 17:30 input.tar.gz
[2025-05-24 19:21:41] -rw------- 1 yeti boinc 196421330 Mai 24 19:20 HITS.pool.root.1
[2025-05-24 19:21:41] -rw------- 1 yeti boinc    931840 Mai 24 19:21 result.tar.gz
19:21:42 (344425): run_atlas exited; CPU time 25398.585691
19:21:42 (344425): called boinc_finish(0)

</stderr_txt>
]]>

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