Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:47:34 (2032784): wrapper (7.7.26015): starting
03:47:34 (2032784): wrapper: running run_atlas (--nthreads 6)
[2025-05-25 03:47:34] Arguments: --nthreads 6
[2025-05-25 03:47:34] Threads: 6
[2025-05-25 03:47:34] Checking for CVMFS
[2025-05-25 03:47:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 03:47:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 03:47:35] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 03:47:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 03:47:35] 2.11.5.0 1578993 565 68128 146376 3 61 41399128 52428800 1858 130560 0 1248692 99.995 157654 104 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-05-25 03:47:35] CVMFS is ok
[2025-05-25 03:47:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 03:47:35] Checking for apptainer binary...
[2025-05-25 03:47:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 03:47:35] Running /usr/bin/apptainer --version
[2025-05-25 03:47:35] apptainer version 1.3.5-1.el9
[2025-05-25 03:47:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 03:47:35] testio008
[2025-05-25 03:47:35] apptainer works
[2025-05-25 03:47:35] Set ATHENA_PROC_NUMBER=6
[2025-05-25 03:47:35] Set ATHENA_CORE_NUMBER=6
[2025-05-25 03:47:35] Starting ATLAS job with PandaID=6665379307
[2025-05-25 03:47:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 05:16:27]  *** The last 200 lines of the pilot log: ***
[2025-05-25 05:16:27] 2025-05-24 20:15:24,807 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:16:27] 2025-05-24 20:15:27,310 | INFO     | monitor loop #401: job 0:6665379307 is in state 'finished'
[2025-05-25 05:16:27] 2025-05-24 20:15:27,310 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:16:27] 2025-05-24 20:15:29,812 | INFO     | monitor loop #402: job 0:6665379307 is in state 'finished'
[2025-05-25 05:16:27] 2025-05-24 20:15:29,812 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:16:27] 2025-05-24 20:15:32,315 | INFO     | monitor loop #403: job 0:6665379307 is in state 'finished'
[2025-05-25 05:16:27] 2025-05-24 20:15:32,315 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:16:27] 2025-05-24 20:15:34,817 | INFO     | monitor loop #404: job 0:6665379307 is in state 'finished'
[2025-05-25 05:16:27] 2025-05-24 20:15:34,817 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:16:27] 2025-05-24 20:15:37,319 | INFO     | monitor loop #405: job 0:6665379307 is in state 'finished'
[2025-05-25 05:16:27] 2025-05-24 20:15:37,319 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:16:27] 2025-05-24 20:15:39,822 | INFO     | monitor loop #406: job 0:6665379307 is in state 'finished'
[2025-05-25 05:16:27] 2025-05-24 20:15:39,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:16:27] 2025-05-24 20:15:40,079 | INFO     | PID=2036520 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 05:16:27] 2025-05-24 20:15:40,079 | INFO     | .. there are 3 such processes running
[2025-05-25 05:16:27] 2025-05-24 20:15:42,325 | INFO     | monitor loop #407: job 0:6665379307 is in state 'finished'
[2025-05-25 05:16:27] 2025-05-24 20:15:42,325 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:16:27] 2025-05-24 20:15:44,827 | INFO     | monitor loop #408: job 0:6665379307 is in state 'finished'
[2025-05-25 05:16:27] 2025-05-24 20:15:44,827 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:16:27] 2025-05-24 20:15:47,329 | INFO     | monitor loop #409: job 0:6665379307 is in state 'finished'
[2025-05-25 05:16:27] 2025-05-24 20:15:47,329 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:16:27] 2025-05-24 20:15:49,831 | INFO     | monitor loop #410: job 0:6665379307 is in state 'finished'
[2025-05-25 05:16:27] 2025-05-24 20:15:49,831 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:16:27] 2025-05-24 20:15:52,333 | INFO     | monitor loop #411: job 0:6665379307 is in state 'finished'
[2025-05-25 05:16:27] 2025-05-24 20:15:52,333 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:16:27] 2025-05-24 20:15:54,836 | INFO     | monitor loop #412: job 0:6665379307 is in state 'finished'
[2025-05-25 05:16:27] 2025-05-24 20:15:54,836 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:16:27] 2025-05-24 20:15:57,338 | INFO     | monitor loop #413: job 0:6665379307 is in state 'finished'
[2025-05-25 05:16:27] 2025-05-24 20:15:57,338 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:16:27] 2025-05-24 20:15:59,840 | INFO     | monitor loop #414: job 0:6665379307 is in state 'finished'
[2025-05-25 05:16:27] 2025-05-24 20:15:59,840 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:16:27] 2025-05-24 20:16:02,181 | INFO     | PID=2036520 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 05:16:27] 2025-05-24 20:16:02,181 | INFO     | .. there are 3 such processes running
[2025-05-25 05:16:27] 2025-05-24 20:16:02,342 | INFO     | monitor loop #415: job 0:6665379307 is in state 'finished'
[2025-05-25 05:16:27] 2025-05-24 20:16:02,342 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:16:27] 2025-05-24 20:16:04,844 | INFO     | monitor loop #416: job 0:6665379307 is in state 'finished'
[2025-05-25 05:16:27] 2025-05-24 20:16:04,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:16:27] 2025-05-24 20:16:07,346 | INFO     | monitor loop #417: job 0:6665379307 is in state 'finished'
[2025-05-25 05:16:27] 2025-05-24 20:16:07,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:16:27] 2025-05-24 20:16:09,082 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 05:16:27] 2025-05-24 20:16:09,082 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-6665379307/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 05:16:27] 2025-05-24 20:16:09,083 | INFO     | extracted standard info from prmon json
[2025-05-25 05:16:27] 2025-05-24 20:16:09,083 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 05:16:27] 2025-05-24 20:16:09,083 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 05:16:27] 2025-05-24 20:16:09,083 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 05:16:27] 2025-05-24 20:16:09,083 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 05:16:27] 2025-05-24 20:16:09,085 | INFO     | fitting pss+swap vs Time
[2025-05-25 05:16:27] 2025-05-24 20:16:09,085 | INFO     | sum of square deviations: 152858680.0
[2025-05-25 05:16:27] 2025-05-24 20:16:09,086 | INFO     | sum of deviations: 11653040572.0
[2025-05-25 05:16:27] 2025-05-24 20:16:09,086 | INFO     | mean x: 1748115164.0
[2025-05-25 05:16:27] 2025-05-24 20:16:09,086 | INFO     | mean y: 2393093.6962025315
[2025-05-25 05:16:27] 2025-05-24 20:16:09,086 | INFO     | -- intersect: -133263555105.12662
[2025-05-25 05:16:27] 2025-05-24 20:16:09,086 | INFO     | intersect: -133263555105.12662
[2025-05-25 05:16:27] 2025-05-24 20:16:09,086 | INFO     | chi2: 1.450487033858309
[2025-05-25 05:16:27] 2025-05-24 20:16:09,086 | INFO     | -- intersect: -133263555105.12662
[2025-05-25 05:16:27] 2025-05-24 20:16:09,086 | INFO     | current memory leak: 76.23 B/s (using 79 data points, chi2=1.45)
[2025-05-25 05:16:27] 2025-05-24 20:16:09,087 | INFO     | ..............................
[2025-05-25 05:16:27] 2025-05-24 20:16:09,087 | INFO     | . Timing measurements:
[2025-05-25 05:16:27] 2025-05-24 20:16:09,087 | INFO     | . get job = 0 s
[2025-05-25 05:16:27] 2025-05-24 20:16:09,087 | INFO     | . initial setup = 4 s
[2025-05-25 05:16:27] 2025-05-24 20:16:09,087 | INFO     | . payload setup = 2 s
[2025-05-25 05:16:27] 2025-05-24 20:16:09,087 | INFO     | . stage-in = 0 s
[2025-05-25 05:16:27] 2025-05-24 20:16:09,087 | INFO     | . payload execution = 5211 s
[2025-05-25 05:16:27] 2025-05-24 20:16:09,087 | INFO     | . stage-out = 0 s
[2025-05-25 05:16:27] 2025-05-24 20:16:09,087 | INFO     | . log creation = 0 s
[2025-05-25 05:16:27] 2025-05-24 20:16:09,087 | INFO     | ..............................
[2025-05-25 05:16:27] 2025-05-24 20:16:09,175 | INFO     | 
[2025-05-25 05:16:27] 2025-05-24 20:16:09,175 | INFO     | job summary report
[2025-05-25 05:16:27] 2025-05-24 20:16:09,175 | INFO     | --------------------------------------------------
[2025-05-25 05:16:27] 2025-05-24 20:16:09,175 | INFO     | PanDA job id: 6665379307
[2025-05-25 05:16:27] 2025-05-24 20:16:09,175 | INFO     | task id: 44871837
[2025-05-25 05:16:27] 2025-05-24 20:16:09,175 | INFO     | errors: (none)
[2025-05-25 05:16:27] 2025-05-24 20:16:09,175 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 05:16:27] 2025-05-24 20:16:09,175 | INFO     | pilot state: finished 
[2025-05-25 05:16:27] 2025-05-24 20:16:09,175 | INFO     | transexitcode: 0
[2025-05-25 05:16:27] 2025-05-24 20:16:09,175 | INFO     | exeerrorcode: 0
[2025-05-25 05:16:27] 2025-05-24 20:16:09,175 | INFO     | exeerrordiag: 
[2025-05-25 05:16:27] 2025-05-24 20:16:09,175 | INFO     | exitcode: 0
[2025-05-25 05:16:27] 2025-05-24 20:16:09,175 | INFO     | exitmsg: OK
[2025-05-25 05:16:27] 2025-05-24 20:16:09,176 | INFO     | cpuconsumptiontime: 26512 s
[2025-05-25 05:16:27] 2025-05-24 20:16:09,176 | INFO     | nevents: 400
[2025-05-25 05:16:27] 2025-05-24 20:16:09,176 | INFO     | neventsw: 0
[2025-05-25 05:16:27] 2025-05-24 20:16:09,176 | INFO     | pid: 2043175
[2025-05-25 05:16:27] 2025-05-24 20:16:09,176 | INFO     | pgrp: 2043175
[2025-05-25 05:16:27] 2025-05-24 20:16:09,176 | INFO     | corecount: 6
[2025-05-25 05:16:27] 2025-05-24 20:16:09,176 | INFO     | event service: False
[2025-05-25 05:16:27] 2025-05-24 20:16:09,176 | INFO     | sizes: {0: 2393739, 1: 2393945, 10: 2393973, 5216: 2420236, 5217: 2429235, 5293: 2429349}
[2025-05-25 05:16:27] 2025-05-24 20:16:09,176 | INFO     | --------------------------------------------------
[2025-05-25 05:16:27] 2025-05-24 20:16:09,176 | INFO     | 
[2025-05-25 05:16:27] 2025-05-24 20:16:09,176 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-05-25 05:16:27] 2025-05-24 20:16:09,190 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 05:16:27] 2025-05-24 20:16:09,191 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 05:16:27] 2025-05-24 20:16:09,191 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 05:16:27] 2025-05-24 20:16:09,191 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 05:16:27] 2025-05-24 20:16:09,191 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 05:16:27] 2025-05-24 20:16:09,191 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 05:16:27] 2025-05-24 20:16:09,191 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 05:16:27] 2025-05-24 20:16:09,191 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 05:16:27] 2025-05-24 20:16:09,191 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 05:16:27] 2025-05-24 20:16:09,191 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 05:16:27] 2025-05-24 20:16:09,191 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 05:16:27] 2025-05-24 20:16:09,191 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 05:16:27] 2025-05-24 20:16:09,192 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 05:16:27] 2025-05-24 20:16:09,192 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 05:16:27] 2025-05-24 20:16:09,192 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 05:16:27] 2025-05-24 20:16:09,192 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 05:16:27] 2025-05-24 20:16:09,192 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 05:16:27] 2025-05-24 20:16:09,192 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 05:16:27] 2025-05-24 20:16:09,192 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 05:16:27] 2025-05-24 20:16:09,192 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 05:16:27] 2025-05-24 20:16:09,192 | INFO     | job 6665379307 has completed (purged errors)
[2025-05-25 05:16:27] 2025-05-24 20:16:09,192 | INFO     | overall cleanup function is called
[2025-05-25 05:16:27] 2025-05-24 20:16:10,198 | INFO     | --- collectZombieJob: --- 10, [2043175]
[2025-05-25 05:16:27] 2025-05-24 20:16:10,198 | INFO     | zombie collector waiting for pid 2043175
[2025-05-25 05:16:27] 2025-05-24 20:16:10,198 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 05:16:27] 2025-05-24 20:16:10,199 | INFO     | collected zombie processes
[2025-05-25 05:16:27] 2025-05-24 20:16:10,199 | INFO     | will attempt to kill all subprocesses of pid=2043175
[2025-05-25 05:16:27] 2025-05-24 20:16:10,273 | INFO     | process IDs to be killed: [2043175] (in reverse order)
[2025-05-25 05:16:27] 2025-05-24 20:16:10,307 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 05:16:27] 2025-05-24 20:16:10,308 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 05:16:27] 2025-05-24 20:16:10,311 | INFO     | did not find any defunct processes belonging to 2043175
[2025-05-25 05:16:27] 2025-05-24 20:16:10,313 | INFO     | did not find any defunct processes belonging to 2043175
[2025-05-25 05:16:27] 2025-05-24 20:16:10,313 | INFO     | ready for new job
[2025-05-25 05:16:27] 2025-05-24 20:16:10,314 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 05:16:27] 2025-05-24 20:16:10,315 | INFO     | **************************************
[2025-05-25 05:16:27] 2025-05-24 20:16:10,315 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 05:16:27] 2025-05-24 20:16:10,315 | INFO     | **************************************
[2025-05-25 05:16:27] 2025-05-24 20:16:10,315 | INFO     | 
[2025-05-25 05:16:27] 2025-05-24 20:16:10,316 | INFO     | architecture information:
[2025-05-25 05:16:27] 2025-05-24 20:16:10,316 | INFO     | executing command: cat /etc/os-release
[2025-05-25 05:16:27] 2025-05-24 20:16:10,326 | INFO     | cat /etc/os-release:
[2025-05-25 05:16:27] NAME="CentOS Linux"
[2025-05-25 05:16:27] VERSION="7 (Core)"
[2025-05-25 05:16:27] ID="centos"
[2025-05-25 05:16:27] ID_LIKE="rhel fedora"
[2025-05-25 05:16:27] VERSION_ID="7"
[2025-05-25 05:16:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 05:16:27] ANSI_COLOR="0;31"
[2025-05-25 05:16:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 05:16:27] HOME_URL="https://www.centos.org/"
[2025-05-25 05:16:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 05:16:27] 
[2025-05-25 05:16:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 05:16:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 05:16:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 05:16:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 05:16:27] 
[2025-05-25 05:16:27] 2025-05-24 20:16:10,326 | INFO     | **************************************
[2025-05-25 05:16:27] 2025-05-24 20:16:10,828 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-05-25 05:16:27] 2025-05-24 20:16:10,835 | INFO     | sufficient remaining disk space (283408072704 B)
[2025-05-25 05:16:27] 2025-05-24 20:16:10,835 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 05:16:27] 2025-05-24 20:16:10,835 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 05:16:27] 2025-05-24 20:16:10,835 | INFO     | update_server=False
[2025-05-25 05:16:27] 2025-05-24 20:16:10,835 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 05:16:27] 2025-05-24 20:16:10,835 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 05:16:27] 2025-05-24 20:16:10,836 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 05:16:27] 2025-05-24 20:16:10,836 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 05:16:27] 2025-05-24 20:16:10,836 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 05:16:27] 2025-05-24 20:16:10,836 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 05:16:27] 2025-05-24 20:16:10,854 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 05:16:27] 2025-05-24 20:16:10,854 | INFO     | aborting loop
[2025-05-25 05:16:27] 2025-05-24 20:16:11,382 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 05:16:27] 2025-05-24 20:16:11,435 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 05:16:27] 2025-05-24 20:16:11,805 | INFO     | all payload control threads have been joined
[2025-05-25 05:16:27] 2025-05-24 20:16:11,832 | INFO     | all data control threads have been joined
[2025-05-25 05:16:27] 2025-05-24 20:16:11,840 | INFO     | [job] retrieve thread has finished
[2025-05-25 05:16:27] 2025-05-24 20:16:11,840 | INFO     | [job] queue monitor thread has finished
[2025-05-25 05:16:27] 2025-05-24 20:16:11,859 | INFO     | [job] job monitor thread has finished
[2025-05-25 05:16:27] 2025-05-24 20:16:12,074 | INFO     | all job control threads have been joined
[2025-05-25 05:16:27] 2025-05-24 20:16:12,106 | INFO     | [payload] validate_post thread has finished
[2025-05-25 05:16:27] 2025-05-24 20:16:12,428 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 05:16:27] 2025-05-24 20:16:12,715 | INFO     | [job] validate thread has finished
[2025-05-25 05:16:27] 2025-05-24 20:16:12,810 | INFO     | [payload] control thread has finished
[2025-05-25 05:16:27] 2025-05-24 20:16:12,837 | INFO     | [data] control thread has finished
[2025-05-25 05:16:27] 2025-05-24 20:16:12,853 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 05:16:27] 2025-05-24 20:16:12,865 | INFO     | [data] copytool_in thread has finished
[2025-05-25 05:16:27] 2025-05-24 20:16:13,079 | INFO     | [job] control thread has finished
[2025-05-25 05:16:27] 2025-05-24 20:16:13,093 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 05:16:27] 2025-05-24 20:16:13,103 | INFO     | [payload] failed_post thread has finished
[2025-05-25 05:16:27] 2025-05-24 20:16:13,387 | INFO     | [data] copytool_out thread has finished
[2025-05-25 05:16:27] 2025-05-24 20:16:15,441 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 05:16:27] 2025-05-24 20:16:21,020 | INFO     | job.realtimelogging is not enabled
[2025-05-25 05:16:27] 2025-05-24 20:16:22,025 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 05:16:27] 2025-05-24 20:16:22,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140666515904320)>', '<ExcThread(monitor, started 140665732192000)>']
[2025-05-25 05:16:27] 2025-05-24 20:16:22,889 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 05:16:27] 2025-05-24 20:16:22,889 | INFO     | [monitor] control thread has ended
[2025-05-25 05:16:27] 2025-05-24 20:16:27,540 | INFO     | all workflow threads have been joined
[2025-05-25 05:16:27] 2025-05-24 20:16:27,540 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 05:16:27] 2025-05-24 20:16:27,540 | INFO     | traces error code: 0
[2025-05-25 05:16:27] 2025-05-24 20:16:27,540 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 05:16:27] 2025-05-24 20:16:27,594 [wrapper] ==== pilot stdout END ====
[2025-05-25 05:16:27] 2025-05-24 20:16:27,595 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 05:16:27] 2025-05-24 20:16:27,596 [wrapper] pilotpid: 2036520
[2025-05-25 05:16:27] 2025-05-24 20:16:27,597 [wrapper] Pilot exit status: 0
[2025-05-25 05:16:27] 2025-05-24 20:16:27,601 [wrapper] pandaids: 6665379307
[2025-05-25 05:16:27] 2025-05-24 20:16:27,612 [wrapper] cleanup supervisor_pilot 2100033 2036521
[2025-05-25 05:16:27] 2025-05-24 20:16:27,613 [wrapper] Test setup, not cleaning
[2025-05-25 05:16:27] 2025-05-24 20:16:27,614 [wrapper] apfmon messages muted
[2025-05-25 05:16:27] 2025-05-24 20:16:27,615 [wrapper] ==== wrapper stdout END ====
[2025-05-25 05:16:27] 2025-05-24 20:16:27,616 [wrapper] ==== wrapper stderr END ====
[2025-05-25 05:16:27]  *** Error codes and diagnostics ***
[2025-05-25 05:16:27]     "exeErrorCode": 0,
[2025-05-25 05:16:27]     "exeErrorDiag": "",
[2025-05-25 05:16:27]     "pilotErrorCode": 0,
[2025-05-25 05:16:27]     "pilotErrorDiag": "",
[2025-05-25 05:16:27]  *** Listing of results directory ***
[2025-05-25 05:16:27] total 414976
[2025-05-25 05:16:27] -rwx------. 1 boinc boinc     37140 May 24 19:13 runpilot2-wrapper.sh
[2025-05-25 05:16:27] -rw-r--r--. 1 boinc boinc      5111 May 24 19:13 queuedata.json
[2025-05-25 05:16:27] -rw-r--r--. 1 boinc boinc    495897 May 24 19:13 pilot3.tar.gz
[2025-05-25 05:16:27] -rw-r--r--. 1 boinc boinc       100 May 25 03:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 05:16:27] -rwxr-xr-x. 1 boinc boinc      7986 May 25 03:47 run_atlas
[2025-05-25 05:16:27] -rw-r--r--. 1 boinc boinc       105 May 25 03:47 job.xml
[2025-05-25 05:16:27] -rw-r--r--. 2 boinc boinc     15093 May 25 03:47 start_atlas.sh
[2025-05-25 05:16:27] drwxrwx--x. 2 boinc boinc        68 May 25 03:47 shared
[2025-05-25 05:16:27] -rw-r--r--. 2 boinc boinc    508875 May 25 03:47 input.tar.gz
[2025-05-25 05:16:27] -rw-r--r--. 1 boinc boinc      9510 May 25 03:47 init_data.xml
[2025-05-25 05:16:27] -rw-r--r--. 2 boinc boinc 225530975 May 25 03:47 EVNT.44871834._000612.pool.root.1
[2025-05-25 05:16:27] -rw-r--r--. 1 boinc boinc         0 May 25 03:47 boinc_lockfile
[2025-05-25 05:16:27] -rw-r--r--. 1 boinc boinc      2557 May 25 03:47 pandaJob.out
[2025-05-25 05:16:27] -rw-------. 1 boinc boinc    988572 May 25 03:47 agis_schedconf.cvmfs.json
[2025-05-25 05:16:27] -rw-------. 1 boinc boinc   1596740 May 25 03:47 agis_ddmendpoints.agis.ALL.json
[2025-05-25 05:16:27] drwx------. 4 boinc boinc      4096 May 25 03:47 pilot3
[2025-05-25 05:16:27] -rw-------. 1 boinc boinc 193979614 May 25 05:14 HITS.44871837._015299.pool.root.1
[2025-05-25 05:16:27] -rw-------. 1 boinc boinc      1021 May 25 05:14 memory_monitor_summary.json
[2025-05-25 05:16:27] -rw-------. 1 boinc boinc    286285 May 25 05:14 log.44871837._015299.job.log.tgz.1
[2025-05-25 05:16:27] -rw-r--r--. 1 boinc boinc       529 May 25 05:14 boinc_task_state.xml
[2025-05-25 05:16:27] -rw-------. 1 boinc boinc        95 May 25 05:15 pilot_heartbeat.json
[2025-05-25 05:16:27] -rw-------. 1 boinc boinc      7666 May 25 05:16 heartbeat.json
[2025-05-25 05:16:27] -rw-r--r--. 1 boinc boinc        27 May 25 05:16 wrapper_checkpoint.txt
[2025-05-25 05:16:27] -rw-r--r--. 1 boinc boinc      8192 May 25 05:16 boinc_mmap_file
[2025-05-25 05:16:27] -rw-------. 1 boinc boinc      4550 May 25 05:16 pilotlog.txt
[2025-05-25 05:16:27] -rw-------. 1 boinc boinc    517129 May 25 05:16 log.44871837._015299.job.log.1
[2025-05-25 05:16:27] -rw-------. 1 boinc boinc       357 May 25 05:16 output.list
[2025-05-25 05:16:27] -rw-r--r--. 1 boinc boinc       620 May 25 05:16 runtime_log
[2025-05-25 05:16:27] -rw-------. 1 boinc boinc    819200 May 25 05:16 result.tar.gz
[2025-05-25 05:16:27] -rw-------. 1 boinc boinc       642 May 25 05:16 z2WMDmQ30c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmf6QKDmOuCqan.diag
[2025-05-25 05:16:27] -rw-r--r--. 1 boinc boinc      8631 May 25 05:16 runtime_log.err
[2025-05-25 05:16:27] -rw-r--r--. 1 boinc boinc     22090 May 25 05:16 stderr.txt
[2025-05-25 05:16:27] HITS file was successfully produced:
[2025-05-25 05:16:27] -rw-------. 1 boinc boinc 193979614 May 25 05:14 shared/HITS.pool.root.1
[2025-05-25 05:16:27]  *** Contents of shared directory: ***
[2025-05-25 05:16:27] total 411000
[2025-05-25 05:16:27] -rw-r--r--. 2 boinc boinc     15093 May 25 03:47 start_atlas.sh
[2025-05-25 05:16:27] -rw-r--r--. 2 boinc boinc    508875 May 25 03:47 input.tar.gz
[2025-05-25 05:16:27] -rw-r--r--. 2 boinc boinc 225530975 May 25 03:47 ATLAS.root_0
[2025-05-25 05:16:27] -rw-------. 1 boinc boinc 193979614 May 25 05:14 HITS.pool.root.1
[2025-05-25 05:16:27] -rw-------. 1 boinc boinc    819200 May 25 05:16 result.tar.gz
05:16:28 (2032784): run_atlas exited; CPU time 26549.495263
05:16:28 (2032784): called boinc_finish(0)

</stderr_txt>
]]>

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