Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
10:41:06 (625086): wrapper (7.7.26015): starting
10:41:06 (625086): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 10:41:06] Arguments: --nthreads 8
[2025-05-24 10:41:06] Threads: 8
[2025-05-24 10:41:06] Checking for CVMFS
[2025-05-24 10:41:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 10:41:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 10:41:07] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 10:41:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 10:41:09] 2.12.6.0 213643 16511 313376 146370 3 566 32486409 40960001 37348 16776704 0 181477178 99.747 120808996 23510 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 10:41:09] CVMFS is ok
[2025-05-24 10:41:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 10:41:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 10:41:09] Further information can be found at the LHC@home message board.
[2025-05-24 10:41:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 10:41:09] Checking for apptainer binary...
[2025-05-24 10:41:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 10:41:09] Running /usr/bin/apptainer --version
[2025-05-24 10:41:10] apptainer version 1.4.1-1.el9
[2025-05-24 10:41:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 10:41:11] c7-2-17.aglt2.org
[2025-05-24 10:41:11] apptainer works
[2025-05-24 10:41:11] Set ATHENA_PROC_NUMBER=8
[2025-05-24 10:41:11] Set ATHENA_CORE_NUMBER=8
[2025-05-24 10:41:11] Starting ATLAS job with PandaID=6665280621
[2025-05-24 10:41:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 19:11:30] Job failed
[2025-05-24 19:11:30] ++ pwd
[2025-05-24 19:11:30] + export RUNTIME_CONFIG_DIR=/tmp/boinchome/slots/9/
[2025-05-24 19:11:30] + RUNTIME_CONFIG_DIR=/tmp/boinchome/slots/9/
[2025-05-24 19:11:30] + mv ATLAS.root_0 EVNT.44871834._000413.pool.root.1
[2025-05-24 19:11:30] + tar --strip-components=5 -xvf input.tar.gz
[2025-05-24 19:11:30] + umask 077
[2025-05-24 19:11:30] ++ date +%s
[2025-05-24 19:11:30] + ACCOUNTING_STARTTIME=1748097672
[2025-05-24 19:11:30] + echo 'Detecting resource accounting method available for the job.'
[2025-05-24 19:11:30] Detecting resource accounting method available for the job.
[2025-05-24 19:11:30] + JOB_ACCOUNTING=
[2025-05-24 19:11:30] + command -v arc-job-cgroup
[2025-05-24 19:11:30] + '[' -z '' ']'
[2025-05-24 19:11:30] + GNU_TIME=/usr/bin/time
[2025-05-24 19:11:30] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-05-24 19:11:30] Looking for /usr/bin/time tool for accounting measurements
[2025-05-24 19:11:30] + '[' '!' -z /usr/bin/time ']'
[2025-05-24 19:11:30] + /usr/bin/time --version
[2025-05-24 19:11:30] + echo 'GNU time found and will be used for job accounting.'
[2025-05-24 19:11:30] GNU time found and will be used for job accounting.
[2025-05-24 19:11:30] + JOB_ACCOUNTING=gnutime
[2025-05-24 19:11:30] + '[' -z gnutime ']'
[2025-05-24 19:11:30] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-05-24 19:11:30] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-05-24 19:11:30] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-05-24/BOINC_MCORE/6665280621.out
[2025-05-24 19:11:30] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-05-24/BOINC_MCORE/6665280621.out
[2025-05-24 19:11:30] + export PILOT_NOKILL=YES
[2025-05-24 19:11:30] + PILOT_NOKILL=YES
[2025-05-24 19:11:30] + export GRID_GLOBAL_JOBID=YrWMDmXYyc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmR4LKDm3FM0Oo
[2025-05-24 19:11:30] + GRID_GLOBAL_JOBID=YrWMDmXYyc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmR4LKDm3FM0Oo
[2025-05-24 19:11:30] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/YrWMDmXYyc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmR4LKDm3FM0Oo
[2025-05-24 19:11:30] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/YrWMDmXYyc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmR4LKDm3FM0Oo
[2025-05-24 19:11:30] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-05-24 19:11:30] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-05-24 19:11:30] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-05-24 19:11:30] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-05-24 19:11:30] ++ pwd
[2025-05-24 19:11:30] + RUNTIME_JOB_DIR=/tmp/boinchome/slots/9
[2025-05-24 19:11:30] + RUNTIME_JOB_STDIN=/dev/null
[2025-05-24 19:11:30] ++ pwd
[2025-05-24 19:11:30] + RUNTIME_JOB_STDOUT=/tmp/boinchome/slots/9/log.44871837._010316.job.log.1
[2025-05-24 19:11:30] ++ pwd
[2025-05-24 19:11:30] + RUNTIME_JOB_STDERR=/tmp/boinchome/slots/9/log.44871837._010316.job.log.1
[2025-05-24 19:11:30] ++ pwd
[2025-05-24 19:11:30] + RUNTIME_JOB_DIAG=/tmp/boinchome/slots/9.diag
[2025-05-24 19:11:30] + '[' '!' -z '' ']'
[2025-05-24 19:11:30] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-05-24 19:11:30] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-05-24 19:11:30] + RUNTIME_FRONTEND_SEES_NODE=
[2025-05-24 19:11:30] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-05-24 19:11:30] + '[' '!' -z '' ']'
[2025-05-24 19:11:30] + '[' -z yes ']'
[2025-05-24 19:11:30] ++ pwd
[2025-05-24 19:11:30] + RUNTIME_JOB_DIAG=/tmp/boinchome/slots/9/YrWMDmXYyc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmR4LKDm3FM0Oo.diag
[2025-05-24 19:11:30] + runtimeenvironments=
[2025-05-24 19:11:30] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-05-24 19:11:30] + RTE_function_0 1
[2025-05-24 19:11:30] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-05-24 19:11:30] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-05-24 19:11:30] + export BOINC_APP=ATLAS
[2025-05-24 19:11:30] + BOINC_APP=ATLAS
[2025-05-24 19:11:30] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-05-24 19:11:30] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-05-24 19:11:30] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-05-24 19:11:30] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-05-24 19:11:30] + '[' -z 1 ']'
[2025-05-24 19:11:30] + '[' 1 == 1 ']'
[2025-05-24 19:11:30] + shift
[2025-05-24 19:11:30] + export ATLAS_LOCAL_AREA=/tmp/boinchome/slots/9/
[2025-05-24 19:11:30] + ATLAS_LOCAL_AREA=/tmp/boinchome/slots/9/
[2025-05-24 19:11:30] + '[' 0 -ne 0 ']'
[2025-05-24 19:11:30] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-05-24 19:11:30] + '[' -f /etc/os-release ']'
[2025-05-24 19:11:30] +++ cat /etc/os-release
[2025-05-24 19:11:30] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-05-24 19:11:30] +++ NAME='CentOS Linux'
[2025-05-24 19:11:30] +++ VERSION='7 (Core)'
[2025-05-24 19:11:30] +++ ID=centos
[2025-05-24 19:11:30] +++ ID_LIKE='rhel fedora'
[2025-05-24 19:11:30] +++ VERSION_ID=7
[2025-05-24 19:11:30] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-05-24 19:11:30] +++ ANSI_COLOR='0;31'
[2025-05-24 19:11:30] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-05-24 19:11:30] +++ HOME_URL=https://www.centos.org/
[2025-05-24 19:11:30] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-05-24 19:11:30] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-05-24 19:11:30] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-05-24 19:11:30] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-05-24 19:11:30] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-05-24 19:11:30] ++ echo 'CentOS Linux 7 (Core)'
[2025-05-24 19:11:30] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-05-24 19:11:30] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-05-24 19:11:30] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-05-24 19:11:30] + HOME=/tmp/boinchome/slots/9
[2025-05-24 19:11:30] + export HOME
[2025-05-24 19:11:30] + cd /tmp/boinchome/slots/9
[2025-05-24 19:11:30] + '[' '!' -z '' ']'
[2025-05-24 19:11:30] + '[' -z '' ']'
[2025-05-24 19:11:30] ++ /bin/hostname -f
[2025-05-24 19:11:30] + nodename=c7-2-17.aglt2.org
[2025-05-24 19:11:30] + echo nodename=c7-2-17.aglt2.org
[2025-05-24 19:11:30] + echo Processors=2
[2025-05-24 19:11:30] + echo Nodecount=1
[2025-05-24 19:11:30] + echo Benchmark=HEPSPEC:1.0
[2025-05-24 19:11:30] + executable=./runpilot2-wrapper.sh
[2025-05-24 19:11:30] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-05-24 19:11:30] ++ head -n 1
[2025-05-24 19:11:30] ++ tr -d '\0'
[2025-05-24 19:11:30] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-05-24 19:11:30] + line1='#!/bin/bash'
[2025-05-24 19:11:30] ++ echo '#!/bin/bash'
[2025-05-24 19:11:30] ++ sed -n 's/^#! *//p'
[2025-05-24 19:11:30] + shebang=/bin/bash
[2025-05-24 19:11:30] ++ awk '{print $1}'
[2025-05-24 19:11:30] ++ echo /bin/bash
[2025-05-24 19:11:30] + interpreter=/bin/bash
[2025-05-24 19:11:30] + '[' /bin/bash = /usr/bin/env ']'
[2025-05-24 19:11:30] + '[' x/bin/bash = x ']'
[2025-05-24 19:11:30] + type /bin/bash
[2025-05-24 19:11:30] + '[' xgnutime = xgnutime ']'
[2025-05-24 19:11:30] + /usr/bin/time -o /tmp/boinchome/slots/9/YrWMDmXYyc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmR4LKDm3FM0Oo.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.2.2 -z -t --piloturl local --mute --container
[2025-05-24 19:11:30] + RESULT=1
[2025-05-24 19:11:30] + sed -i -e /nodename=/d /tmp/boinchome/slots/9/YrWMDmXYyc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmR4LKDm3FM0Oo.diag
[2025-05-24 19:11:30] ++ awk -F '>' '{print $2}'
[2025-05-24 19:11:30] ++ grep domain_name init_data.xml
[2025-05-24 19:11:30] ++ sed -e 's# #_#g'
[2025-05-24 19:11:30] ++ awk -F '<' '{print $1}'
[2025-05-24 19:11:30] + hostname=c7-2-17.aglt2.org
[2025-05-24 19:11:30] ++ grep user_name init_data.xml
[2025-05-24 19:11:30] ++ awk -F '>' '{print $2}'
[2025-05-24 19:11:30] ++ awk -F '<' '{print $1}'
[2025-05-24 19:11:30] ++ sed -e 's# #_#g'
[2025-05-24 19:11:30] + username=AGLT2
[2025-05-24 19:11:30] + nodename=AGLT2@c7-2-17.aglt2.org
[2025-05-24 19:11:30] + echo nodename=AGLT2@c7-2-17.aglt2.org
[2025-05-24 19:11:30] + '[' -n 8 ']'
[2025-05-24 19:11:30] + sed -i -e s/Processors=1/Processors=8/ /tmp/boinchome/slots/9/YrWMDmXYyc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmR4LKDm3FM0Oo.diag
[2025-05-24 19:11:30] + echo exitcode=1
[2025-05-24 19:11:30] + runtimeenvironments=
[2025-05-24 19:11:30] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-05-24 19:11:30] + RTE_function_0 2
[2025-05-24 19:11:30] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-05-24 19:11:30] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-05-24 19:11:30] + export BOINC_APP=ATLAS
[2025-05-24 19:11:30] + BOINC_APP=ATLAS
[2025-05-24 19:11:30] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-05-24 19:11:30] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-05-24 19:11:30] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-05-24 19:11:30] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-05-24 19:11:30] + '[' -z 2 ']'
[2025-05-24 19:11:30] + '[' 2 == 1 ']'
[2025-05-24 19:11:30] + '[' 0 -ne 0 ']'
[2025-05-24 19:11:30] + echo 'zip all output files'
[2025-05-24 19:11:30] + flist='*.diag '
[2025-05-24 19:11:30] + for f in ./heartbeat.json ./output.list ./log.44871837._010316.job.log.1 ./log.44871837._010316.job.log.1 ./gmlog/
[2025-05-24 19:11:30] + '[' -e ./heartbeat.json ']'
[2025-05-24 19:11:30] + flist='*.diag  ./heartbeat.json'
[2025-05-24 19:11:30] + for f in ./heartbeat.json ./output.list ./log.44871837._010316.job.log.1 ./log.44871837._010316.job.log.1 ./gmlog/
[2025-05-24 19:11:30] + '[' -e ./output.list ']'
[2025-05-24 19:11:30] + flist='*.diag  ./heartbeat.json ./output.list'
[2025-05-24 19:11:30] + for f in ./heartbeat.json ./output.list ./log.44871837._010316.job.log.1 ./log.44871837._010316.job.log.1 ./gmlog/
[2025-05-24 19:11:30] + '[' -e ./log.44871837._010316.job.log.1 ']'
[2025-05-24 19:11:30] + flist='*.diag  ./heartbeat.json ./output.list ./log.44871837._010316.job.log.1'
[2025-05-24 19:11:30] + for f in ./heartbeat.json ./output.list ./log.44871837._010316.job.log.1 ./log.44871837._010316.job.log.1 ./gmlog/
[2025-05-24 19:11:30] + '[' -e ./log.44871837._010316.job.log.1 ']'
[2025-05-24 19:11:30] + flist='*.diag  ./heartbeat.json ./output.list ./log.44871837._010316.job.log.1 ./log.44871837._010316.job.log.1'
[2025-05-24 19:11:30] + for f in ./heartbeat.json ./output.list ./log.44871837._010316.job.log.1 ./log.44871837._010316.job.log.1 ./gmlog/
[2025-05-24 19:11:30] + '[' -e ./gmlog/ ']'
[2025-05-24 19:11:30] + '[' -f output.list ']'
[2025-05-24 19:11:30] ++ awk '{print $1}' output.list
[2025-05-24 19:11:30] + ol=log.44871837._010316.job.log.tgz.1
[2025-05-24 19:11:30] + for i in '$ol'
[2025-05-24 19:11:30] + [[ -f log.44871837._010316.job.log.tgz.1 ]]
[2025-05-24 19:11:30] + [[ ! log.44871837._010316.job.log.tgz.1 =~ HITS.* ]]
[2025-05-24 19:11:30] + flist='*.diag  ./heartbeat.json ./output.list ./log.44871837._010316.job.log.1 ./log.44871837._010316.job.log.1 log.44871837._010316.job.log.tgz.1'
[2025-05-24 19:11:30] + sed -i -e 's/HITS.* /HITS.pool.root.1 /' output.list
[2025-05-24 19:11:30] + tar cvf result.tar.gz YrWMDmXYyc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmR4LKDm3FM0Oo.diag ./heartbeat.json ./output.list ./log.44871837._010316.job.log.1 ./log.44871837._010316.job.log.1 log.44871837._010316.job.log.tgz.1
[2025-05-24 19:11:30] + '[' xgnutime = xcgroup ']'
[2025-05-24 19:11:30] + '[' -n '' ']'
[2025-05-24 19:11:30] + '[' -n '' ']'
[2025-05-24 19:11:30] ++ date +%s
[2025-05-24 19:11:30] + ACCOUNTING_ENDTIME=1748114432
[2025-05-24 19:11:30] ++ date -d '1970-01-01 UTC 1748097672 seconds' +%Y%m%d%H%M%SZ
[2025-05-24 19:11:30] + echo LRMSStartTime=20250524104112Z
[2025-05-24 19:11:30] ++ date -d '1970-01-01 UTC 1748114432 seconds' +%Y%m%d%H%M%SZ
[2025-05-24 19:11:30] + echo LRMSEndTime=20250524152032Z
[2025-05-24 19:11:30] + echo walltime=16760
[2025-05-24 19:11:30] + echo exitcode=1
[2025-05-24 19:11:30] + exit 1
[2025-05-24 19:11:30] ./log.44871837._010316.job.log.1
[2025-05-24 19:11:30] ./log.44871837._010316.job.log.tgz.1
[2025-05-24 19:11:30] ./runtime_log
[2025-05-24 19:11:30] ./pilotlog.txt
[2025-05-24 19:11:30] ./pilot3/pilot/util/realtimelogger.py
[2025-05-24 19:11:30] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-05-24 19:11:30] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-05-24 19:11:30] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-05-24 19:11:30] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-05-24 19:11:30] ./pilot3/pilot/util/loggingsupport.py
[2025-05-24 19:11:30] ./runtime_log.err
19:21:30 (625086): run_atlas exited; CPU time 888.870974
19:21:30 (625086): app exit status: 0x1
19:21:30 (625086): called boinc_finish(195)

</stderr_txt>
]]>

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