Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:06:15 (2004353): wrapper (7.7.26015): starting
03:06:15 (2004353): wrapper: running run_atlas (--nthreads 6)
[2025-05-25 03:06:15] Arguments: --nthreads 6
[2025-05-25 03:06:15] Threads: 6
[2025-05-25 03:06:15] Checking for CVMFS
[2025-05-25 03:06:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 03:06:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 03:06:15] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 03:06:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 03:06:16] 2.11.5.0 1578993 524 69240 146374 3 187 41393336 52428800 1858 130560 0 1171515 99.995 155066 109 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-05-25 03:06:16] CVMFS is ok
[2025-05-25 03:06:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 03:06:16] Checking for apptainer binary...
[2025-05-25 03:06:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 03:06:16] Running /usr/bin/apptainer --version
[2025-05-25 03:06:16] apptainer version 1.3.5-1.el9
[2025-05-25 03:06:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 03:06:16] testio008
[2025-05-25 03:06:16] apptainer works
[2025-05-25 03:06:16] Set ATHENA_PROC_NUMBER=6
[2025-05-25 03:06:16] Set ATHENA_CORE_NUMBER=6
[2025-05-25 03:06:16] Starting ATLAS job with PandaID=6665378506
[2025-05-25 03:06:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 04:31:21]  *** The last 200 lines of the pilot log: ***
[2025-05-25 04:31:21] 2025-05-24 19:30:23,654 | INFO     | monitor loop #386: job 0:6665378506 is in state 'finished'
[2025-05-25 04:31:21] 2025-05-24 19:30:23,654 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 04:31:21] 2025-05-24 19:30:26,156 | INFO     | monitor loop #387: job 0:6665378506 is in state 'finished'
[2025-05-25 04:31:21] 2025-05-24 19:30:26,156 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 04:31:21] 2025-05-24 19:30:28,658 | INFO     | monitor loop #388: job 0:6665378506 is in state 'finished'
[2025-05-25 04:31:21] 2025-05-24 19:30:28,658 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 04:31:21] 2025-05-24 19:30:31,161 | INFO     | monitor loop #389: job 0:6665378506 is in state 'finished'
[2025-05-25 04:31:21] 2025-05-24 19:30:31,161 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 04:31:21] 2025-05-24 19:30:33,664 | INFO     | monitor loop #390: job 0:6665378506 is in state 'finished'
[2025-05-25 04:31:21] 2025-05-24 19:30:33,664 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 04:31:21] 2025-05-24 19:30:36,167 | INFO     | monitor loop #391: job 0:6665378506 is in state 'finished'
[2025-05-25 04:31:21] 2025-05-24 19:30:36,167 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 04:31:21] 2025-05-24 19:30:37,228 | INFO     | PID=2008048 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 04:31:21] 2025-05-24 19:30:37,228 | INFO     | .. there are 3 such processes running
[2025-05-25 04:31:21] 2025-05-24 19:30:38,670 | INFO     | monitor loop #392: job 0:6665378506 is in state 'finished'
[2025-05-25 04:31:21] 2025-05-24 19:30:38,670 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 04:31:21] 2025-05-24 19:30:41,172 | INFO     | monitor loop #393: job 0:6665378506 is in state 'finished'
[2025-05-25 04:31:21] 2025-05-24 19:30:41,172 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 04:31:21] 2025-05-24 19:30:43,674 | INFO     | monitor loop #394: job 0:6665378506 is in state 'finished'
[2025-05-25 04:31:21] 2025-05-24 19:30:43,674 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 04:31:21] 2025-05-24 19:30:46,177 | INFO     | monitor loop #395: job 0:6665378506 is in state 'finished'
[2025-05-25 04:31:21] 2025-05-24 19:30:46,177 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 04:31:21] 2025-05-24 19:30:48,679 | INFO     | monitor loop #396: job 0:6665378506 is in state 'finished'
[2025-05-25 04:31:21] 2025-05-24 19:30:48,679 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 04:31:21] 2025-05-24 19:30:51,182 | INFO     | monitor loop #397: job 0:6665378506 is in state 'finished'
[2025-05-25 04:31:21] 2025-05-24 19:30:51,182 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 04:31:21] 2025-05-24 19:30:53,684 | INFO     | monitor loop #398: job 0:6665378506 is in state 'finished'
[2025-05-25 04:31:21] 2025-05-24 19:30:53,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 04:31:21] 2025-05-24 19:30:56,187 | INFO     | monitor loop #399: job 0:6665378506 is in state 'finished'
[2025-05-25 04:31:21] 2025-05-24 19:30:56,187 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 04:31:21] 2025-05-24 19:30:58,690 | INFO     | monitor loop #400: job 0:6665378506 is in state 'finished'
[2025-05-25 04:31:21] 2025-05-24 19:30:58,690 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 04:31:21] 2025-05-24 19:30:59,327 | INFO     | PID=2008048 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 04:31:21] 2025-05-24 19:30:59,327 | INFO     | .. there are 3 such processes running
[2025-05-25 04:31:21] 2025-05-24 19:31:01,192 | INFO     | monitor loop #401: job 0:6665378506 is in state 'finished'
[2025-05-25 04:31:21] 2025-05-24 19:31:01,192 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 04:31:21] 2025-05-24 19:31:01,683 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 04:31:21] 2025-05-24 19:31:01,683 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6665378506/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 04:31:21] 2025-05-24 19:31:01,684 | INFO     | extracted standard info from prmon json
[2025-05-25 04:31:21] 2025-05-24 19:31:01,684 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 04:31:21] 2025-05-24 19:31:01,684 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 04:31:21] 2025-05-24 19:31:01,684 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 04:31:21] 2025-05-24 19:31:01,684 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 04:31:21] 2025-05-24 19:31:01,685 | INFO     | fitting pss+swap vs Time
[2025-05-25 04:31:21] 2025-05-24 19:31:01,685 | INFO     | sum of square deviations: 130793150.0
[2025-05-25 04:31:21] 2025-05-24 19:31:01,685 | INFO     | sum of deviations: 14346204846.0
[2025-05-25 04:31:21] 2025-05-24 19:31:01,685 | INFO     | mean x: 1748112563.0
[2025-05-25 04:31:21] 2025-05-24 19:31:01,685 | INFO     | mean y: 2410621.6
[2025-05-25 04:31:21] 2025-05-24 19:31:01,685 | INFO     | -- intersect: -191741430112.13934
[2025-05-25 04:31:21] 2025-05-24 19:31:01,685 | INFO     | intersect: -191741430112.13934
[2025-05-25 04:31:21] 2025-05-24 19:31:01,685 | INFO     | chi2: 1.8343692772673725
[2025-05-25 04:31:21] 2025-05-24 19:31:01,685 | INFO     | -- intersect: -191741430112.13934
[2025-05-25 04:31:21] 2025-05-24 19:31:01,685 | INFO     | current memory leak: 109.69 B/s (using 75 data points, chi2=1.83)
[2025-05-25 04:31:21] 2025-05-24 19:31:01,686 | INFO     | ..............................
[2025-05-25 04:31:21] 2025-05-24 19:31:01,686 | INFO     | . Timing measurements:
[2025-05-25 04:31:21] 2025-05-24 19:31:01,686 | INFO     | . get job = 0 s
[2025-05-25 04:31:21] 2025-05-24 19:31:01,686 | INFO     | . initial setup = 3 s
[2025-05-25 04:31:21] 2025-05-24 19:31:01,686 | INFO     | . payload setup = 2 s
[2025-05-25 04:31:21] 2025-05-24 19:31:01,686 | INFO     | . stage-in = 0 s
[2025-05-25 04:31:21] 2025-05-24 19:31:01,686 | INFO     | . payload execution = 4975 s
[2025-05-25 04:31:21] 2025-05-24 19:31:01,686 | INFO     | . stage-out = 0 s
[2025-05-25 04:31:21] 2025-05-24 19:31:01,686 | INFO     | . log creation = 0 s
[2025-05-25 04:31:21] 2025-05-24 19:31:01,686 | INFO     | ..............................
[2025-05-25 04:31:21] 2025-05-24 19:31:01,731 | INFO     | 
[2025-05-25 04:31:21] 2025-05-24 19:31:01,731 | INFO     | job summary report
[2025-05-25 04:31:21] 2025-05-24 19:31:01,731 | INFO     | --------------------------------------------------
[2025-05-25 04:31:21] 2025-05-24 19:31:01,731 | INFO     | PanDA job id: 6665378506
[2025-05-25 04:31:21] 2025-05-24 19:31:01,731 | INFO     | task id: 44871837
[2025-05-25 04:31:21] 2025-05-24 19:31:01,731 | INFO     | errors: (none)
[2025-05-25 04:31:21] 2025-05-24 19:31:01,732 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 04:31:21] 2025-05-24 19:31:01,732 | INFO     | pilot state: finished 
[2025-05-25 04:31:21] 2025-05-24 19:31:01,732 | INFO     | transexitcode: 0
[2025-05-25 04:31:21] 2025-05-24 19:31:01,732 | INFO     | exeerrorcode: 0
[2025-05-25 04:31:21] 2025-05-24 19:31:01,732 | INFO     | exeerrordiag: 
[2025-05-25 04:31:21] 2025-05-24 19:31:01,732 | INFO     | exitcode: 0
[2025-05-25 04:31:21] 2025-05-24 19:31:01,732 | INFO     | exitmsg: OK
[2025-05-25 04:31:21] 2025-05-24 19:31:01,732 | INFO     | cpuconsumptiontime: 24812 s
[2025-05-25 04:31:21] 2025-05-24 19:31:01,732 | INFO     | nevents: 400
[2025-05-25 04:31:21] 2025-05-24 19:31:01,732 | INFO     | neventsw: 0
[2025-05-25 04:31:21] 2025-05-24 19:31:01,732 | INFO     | pid: 2014578
[2025-05-25 04:31:21] 2025-05-24 19:31:01,732 | INFO     | pgrp: 2014578
[2025-05-25 04:31:21] 2025-05-24 19:31:01,732 | INFO     | corecount: 6
[2025-05-25 04:31:21] 2025-05-24 19:31:01,732 | INFO     | event service: False
[2025-05-25 04:31:21] 2025-05-24 19:31:01,732 | INFO     | sizes: {0: 2393740, 2: 2393946, 11: 2393974, 4981: 2429124, 4982: 2429124, 5066: 2429294}
[2025-05-25 04:31:21] 2025-05-24 19:31:01,732 | INFO     | --------------------------------------------------
[2025-05-25 04:31:21] 2025-05-24 19:31:01,732 | INFO     | 
[2025-05-25 04:31:21] 2025-05-24 19:31:01,732 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-05-25 04:31:21] 2025-05-24 19:31:01,740 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 04:31:21] 2025-05-24 19:31:01,740 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 04:31:21] 2025-05-24 19:31:01,740 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 04:31:21] 2025-05-24 19:31:01,740 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 04:31:21] 2025-05-24 19:31:01,740 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 04:31:21] 2025-05-24 19:31:01,740 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 04:31:21] 2025-05-24 19:31:01,740 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 04:31:21] 2025-05-24 19:31:01,740 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 04:31:21] 2025-05-24 19:31:01,740 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 04:31:21] 2025-05-24 19:31:01,740 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 04:31:21] 2025-05-24 19:31:01,740 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 04:31:21] 2025-05-24 19:31:01,740 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 04:31:21] 2025-05-24 19:31:01,740 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 04:31:21] 2025-05-24 19:31:01,740 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 04:31:21] 2025-05-24 19:31:01,741 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 04:31:21] 2025-05-24 19:31:01,741 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 04:31:21] 2025-05-24 19:31:01,741 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 04:31:21] 2025-05-24 19:31:01,741 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 04:31:21] 2025-05-24 19:31:01,741 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 04:31:21] 2025-05-24 19:31:01,741 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 04:31:21] 2025-05-24 19:31:01,741 | INFO     | job 6665378506 has completed (purged errors)
[2025-05-25 04:31:21] 2025-05-24 19:31:01,741 | INFO     | overall cleanup function is called
[2025-05-25 04:31:21] 2025-05-24 19:31:02,331 | INFO     | 5081s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-25 04:31:21] 2025-05-24 19:31:02,746 | INFO     | --- collectZombieJob: --- 10, [2014578]
[2025-05-25 04:31:21] 2025-05-24 19:31:02,746 | INFO     | zombie collector waiting for pid 2014578
[2025-05-25 04:31:21] 2025-05-24 19:31:02,746 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 04:31:21] 2025-05-24 19:31:02,747 | INFO     | collected zombie processes
[2025-05-25 04:31:21] 2025-05-24 19:31:02,747 | INFO     | will attempt to kill all subprocesses of pid=2014578
[2025-05-25 04:31:21] 2025-05-24 19:31:02,822 | INFO     | process IDs to be killed: [2014578] (in reverse order)
[2025-05-25 04:31:21] 2025-05-24 19:31:02,858 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 04:31:21] 2025-05-24 19:31:02,858 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 04:31:21] 2025-05-24 19:31:02,861 | INFO     | did not find any defunct processes belonging to 2014578
[2025-05-25 04:31:21] 2025-05-24 19:31:02,864 | INFO     | did not find any defunct processes belonging to 2014578
[2025-05-25 04:31:21] 2025-05-24 19:31:02,864 | INFO     | ready for new job
[2025-05-25 04:31:21] 2025-05-24 19:31:02,864 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 04:31:21] 2025-05-24 19:31:02,865 | INFO     | **************************************
[2025-05-25 04:31:21] 2025-05-24 19:31:02,865 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 04:31:21] 2025-05-24 19:31:02,866 | INFO     | **************************************
[2025-05-25 04:31:21] 2025-05-24 19:31:02,866 | INFO     | 
[2025-05-25 04:31:21] 2025-05-24 19:31:02,867 | INFO     | architecture information:
[2025-05-25 04:31:21] 2025-05-24 19:31:02,867 | INFO     | executing command: cat /etc/os-release
[2025-05-25 04:31:21] 2025-05-24 19:31:02,876 | INFO     | cat /etc/os-release:
[2025-05-25 04:31:21] NAME="CentOS Linux"
[2025-05-25 04:31:21] VERSION="7 (Core)"
[2025-05-25 04:31:21] ID="centos"
[2025-05-25 04:31:21] ID_LIKE="rhel fedora"
[2025-05-25 04:31:21] VERSION_ID="7"
[2025-05-25 04:31:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 04:31:21] ANSI_COLOR="0;31"
[2025-05-25 04:31:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 04:31:21] HOME_URL="https://www.centos.org/"
[2025-05-25 04:31:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 04:31:21] 
[2025-05-25 04:31:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 04:31:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 04:31:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 04:31:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 04:31:21] 
[2025-05-25 04:31:21] 2025-05-24 19:31:02,876 | INFO     | **************************************
[2025-05-25 04:31:21] 2025-05-24 19:31:03,379 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-05-25 04:31:21] 2025-05-24 19:31:03,390 | INFO     | sufficient remaining disk space (283499298816 B)
[2025-05-25 04:31:21] 2025-05-24 19:31:03,390 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 04:31:21] 2025-05-24 19:31:03,391 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 04:31:21] 2025-05-24 19:31:03,391 | INFO     | update_server=False
[2025-05-25 04:31:21] 2025-05-24 19:31:03,391 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 04:31:21] 2025-05-24 19:31:03,391 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 04:31:21] 2025-05-24 19:31:03,391 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 04:31:21] 2025-05-24 19:31:03,391 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 04:31:21] 2025-05-24 19:31:03,391 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 04:31:21] 2025-05-24 19:31:03,392 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 04:31:21] 2025-05-24 19:31:03,392 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 04:31:21] 2025-05-24 19:31:03,438 | INFO     | all data control threads have been joined
[2025-05-25 04:31:21] 2025-05-24 19:31:03,533 | INFO     | all job control threads have been joined
[2025-05-25 04:31:21] 2025-05-24 19:31:03,695 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-25 04:31:21] 2025-05-24 19:31:03,695 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-25 04:31:21] 2025-05-24 19:31:03,695 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 04:31:21] 2025-05-24 19:31:03,696 | INFO     | will abort loop
[2025-05-25 04:31:21] 2025-05-24 19:31:04,396 | INFO     | [job] retrieve thread has finished
[2025-05-25 04:31:21] 2025-05-24 19:31:04,396 | INFO     | [job] queue monitor thread has finished
[2025-05-25 04:31:21] 2025-05-24 19:31:04,443 | INFO     | [data] control thread has finished
[2025-05-25 04:31:21] 2025-05-24 19:31:04,539 | INFO     | [job] control thread has finished
[2025-05-25 04:31:21] 2025-05-24 19:31:04,647 | INFO     | [payload] validate_post thread has finished
[2025-05-25 04:31:21] 2025-05-24 19:31:04,701 | INFO     | [job] job monitor thread has finished
[2025-05-25 04:31:21] 2025-05-24 19:31:04,869 | INFO     | all payload control threads have been joined
[2025-05-25 04:31:21] 2025-05-24 19:31:04,958 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 04:31:21] 2025-05-24 19:31:05,143 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 04:31:21] 2025-05-24 19:31:05,251 | INFO     | [job] validate thread has finished
[2025-05-25 04:31:21] 2025-05-24 19:31:05,389 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 04:31:21] 2025-05-24 19:31:05,396 | INFO     | [data] copytool_out thread has finished
[2025-05-25 04:31:21] 2025-05-24 19:31:05,400 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 04:31:21] 2025-05-24 19:31:05,684 | INFO     | [data] copytool_in thread has finished
[2025-05-25 04:31:21] 2025-05-24 19:31:05,820 | INFO     | [payload] failed_post thread has finished
[2025-05-25 04:31:21] 2025-05-24 19:31:05,874 | INFO     | [payload] control thread has finished
[2025-05-25 04:31:21] 2025-05-24 19:31:09,405 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 04:31:21] 2025-05-24 19:31:14,376 | INFO     | job.realtimelogging is not enabled
[2025-05-25 04:31:21] 2025-05-24 19:31:15,381 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 04:31:21] 2025-05-24 19:31:16,237 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139799715186496)>', '<ExcThread(monitor, started 139799079929600)>']
[2025-05-25 04:31:21] 2025-05-24 19:31:16,456 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 04:31:21] 2025-05-24 19:31:16,456 | INFO     | [monitor] control thread has ended
[2025-05-25 04:31:21] 2025-05-24 19:31:21,262 | INFO     | all workflow threads have been joined
[2025-05-25 04:31:21] 2025-05-24 19:31:21,263 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 04:31:21] 2025-05-24 19:31:21,263 | INFO     | traces error code: 0
[2025-05-25 04:31:21] 2025-05-24 19:31:21,263 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 04:31:21] 2025-05-24 19:31:21,341 [wrapper] ==== pilot stdout END ====
[2025-05-25 04:31:21] 2025-05-24 19:31:21,343 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 04:31:21] 2025-05-24 19:31:21,345 [wrapper] pilotpid: 2008048
[2025-05-25 04:31:21] 2025-05-24 19:31:21,347 [wrapper] Pilot exit status: 0
[2025-05-25 04:31:21] 2025-05-24 19:31:21,354 [wrapper] pandaids: 6665378506
[2025-05-25 04:31:21] 2025-05-24 19:31:21,375 [wrapper] cleanup supervisor_pilot 2075829 2008049
[2025-05-25 04:31:21] 2025-05-24 19:31:21,377 [wrapper] Test setup, not cleaning
[2025-05-25 04:31:21] 2025-05-24 19:31:21,379 [wrapper] apfmon messages muted
[2025-05-25 04:31:21] 2025-05-24 19:31:21,381 [wrapper] ==== wrapper stdout END ====
[2025-05-25 04:31:21] 2025-05-24 19:31:21,383 [wrapper] ==== wrapper stderr END ====
[2025-05-25 04:31:21]  *** Error codes and diagnostics ***
[2025-05-25 04:31:21]     "exeErrorCode": 0,
[2025-05-25 04:31:21]     "exeErrorDiag": "",
[2025-05-25 04:31:21]     "pilotErrorCode": 0,
[2025-05-25 04:31:21]     "pilotErrorDiag": "",
[2025-05-25 04:31:21]  *** Listing of results directory ***
[2025-05-25 04:31:21] total 421068
[2025-05-25 04:31:21] -rw-r--r--. 1 boinc boinc    495897 May 24 18:43 pilot3.tar.gz
[2025-05-25 04:31:21] -rwx------. 1 boinc boinc     37140 May 24 18:47 runpilot2-wrapper.sh
[2025-05-25 04:31:21] -rw-r--r--. 1 boinc boinc      5111 May 24 18:47 queuedata.json
[2025-05-25 04:31:21] -rw-r--r--. 1 boinc boinc       100 May 25 03:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 04:31:21] -rwxr-xr-x. 1 boinc boinc      7986 May 25 03:06 run_atlas
[2025-05-25 04:31:21] -rw-r--r--. 1 boinc boinc       105 May 25 03:06 job.xml
[2025-05-25 04:31:21] -rw-r--r--. 1 boinc boinc      9510 May 25 03:06 init_data.xml
[2025-05-25 04:31:21] -rw-r--r--. 2 boinc boinc 222851640 May 25 03:06 EVNT.44871834._000584.pool.root.1
[2025-05-25 04:31:21] -rw-r--r--. 2 boinc boinc     15093 May 25 03:06 start_atlas.sh
[2025-05-25 04:31:21] drwxrwx--x. 2 boinc boinc        68 May 25 03:06 shared
[2025-05-25 04:31:21] -rw-r--r--. 2 boinc boinc    508869 May 25 03:06 input.tar.gz
[2025-05-25 04:31:21] -rw-r--r--. 1 boinc boinc         0 May 25 03:06 boinc_lockfile
[2025-05-25 04:31:21] -rw-r--r--. 1 boinc boinc      2558 May 25 03:06 pandaJob.out
[2025-05-25 04:31:21] -rw-------. 1 boinc boinc    988572 May 25 03:06 agis_schedconf.cvmfs.json
[2025-05-25 04:31:21] -rw-------. 1 boinc boinc   1596740 May 25 03:06 agis_ddmendpoints.agis.ALL.json
[2025-05-25 04:31:21] drwx------. 4 boinc boinc      4096 May 25 03:06 pilot3
[2025-05-25 04:31:21] -rw-------. 1 boinc boinc 202917534 May 25 04:29 HITS.44871837._014605.pool.root.1
[2025-05-25 04:31:21] -rw-r--r--. 1 boinc boinc       529 May 25 04:29 boinc_task_state.xml
[2025-05-25 04:31:21] -rw-------. 1 boinc boinc      1021 May 25 04:29 memory_monitor_summary.json
[2025-05-25 04:31:21] -rw-------. 1 boinc boinc    293192 May 25 04:29 log.44871837._014605.job.log.tgz.1
[2025-05-25 04:31:21] -rw-------. 1 boinc boinc        95 May 25 04:30 pilot_heartbeat.json
[2025-05-25 04:31:21] -rw-r--r--. 1 boinc boinc      8192 May 25 04:30 boinc_mmap_file
[2025-05-25 04:31:21] -rw-r--r--. 1 boinc boinc        27 May 25 04:30 wrapper_checkpoint.txt
[2025-05-25 04:31:21] -rw-------. 1 boinc boinc      7670 May 25 04:31 heartbeat.json
[2025-05-25 04:31:21] -rw-------. 1 boinc boinc      4736 May 25 04:31 pilotlog.txt
[2025-05-25 04:31:21] -rw-------. 1 boinc boinc    498140 May 25 04:31 log.44871837._014605.job.log.1
[2025-05-25 04:31:21] -rw-------. 1 boinc boinc       357 May 25 04:31 output.list
[2025-05-25 04:31:21] -rw-r--r--. 1 boinc boinc       620 May 25 04:31 runtime_log
[2025-05-25 04:31:21] -rw-------. 1 boinc boinc    808960 May 25 04:31 result.tar.gz
[2025-05-25 04:31:21] -rw-------. 1 boinc boinc       642 May 25 04:31 uBzLDmVe0c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnzQKDmHsJUsn.diag
[2025-05-25 04:31:21] -rw-r--r--. 1 boinc boinc      8631 May 25 04:31 runtime_log.err
[2025-05-25 04:31:21] -rw-r--r--. 1 boinc boinc     22055 May 25 04:31 stderr.txt
[2025-05-25 04:31:21] HITS file was successfully produced:
[2025-05-25 04:31:21] -rw-------. 1 boinc boinc 202917534 May 25 04:29 shared/HITS.pool.root.1
[2025-05-25 04:31:21]  *** Contents of shared directory: ***
[2025-05-25 04:31:21] total 417104
[2025-05-25 04:31:21] -rw-r--r--. 2 boinc boinc 222851640 May 25 03:06 ATLAS.root_0
[2025-05-25 04:31:21] -rw-r--r--. 2 boinc boinc     15093 May 25 03:06 start_atlas.sh
[2025-05-25 04:31:21] -rw-r--r--. 2 boinc boinc    508869 May 25 03:06 input.tar.gz
[2025-05-25 04:31:21] -rw-------. 1 boinc boinc 202917534 May 25 04:29 HITS.pool.root.1
[2025-05-25 04:31:21] -rw-------. 1 boinc boinc    808960 May 25 04:31 result.tar.gz
04:31:22 (2004353): run_atlas exited; CPU time 24845.548769
04:31:22 (2004353): called boinc_finish(0)

</stderr_txt>
]]>

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