Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:55:48 (18347): wrapper (7.7.26015): starting
23:55:48 (18347): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 23:55:48] Arguments: --nthreads 8
[2025-05-24 23:55:48] Threads: 8
[2025-05-24 23:55:48] Checking for CVMFS
[2025-05-24 23:55:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 23:55:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 23:55:49] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 23:55:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 23:55:49] 2.11.2.0 22842 17935 89608 146380 1 114 13918800 25165825 1864 130560 0 10577894 99.738 12937036 1754 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-24 23:55:49] CVMFS is ok
[2025-05-24 23:55:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 23:55:49] Checking for apptainer binary...
[2025-05-24 23:55:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 23:55:49] Running /usr/bin/apptainer --version
[2025-05-24 23:55:49] apptainer version 1.3.2-1.el7
[2025-05-24 23:55:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 23:55:50] cg-vwn428.simple-grid.lan
[2025-05-24 23:55:50] apptainer works
[2025-05-24 23:55:51] Set ATHENA_PROC_NUMBER=8
[2025-05-24 23:55:51] Set ATHENA_CORE_NUMBER=8
[2025-05-24 23:55:51] Starting ATLAS job with PandaID=6665377864
[2025-05-24 23:55:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 05:27:54]  *** The last 200 lines of the pilot log: ***
[2025-05-25 05:27:54] 2025-05-25 03:08:07,806 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 05:27:54] 2025-05-25 03:08:07,806 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 05:27:54] 2025-05-25 03:08:07,806 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 05:27:54] 2025-05-25 03:08:07,806 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 05:27:54] 2025-05-25 03:08:07,813 | INFO     | fitting pss+swap vs Time
[2025-05-25 05:27:54] 2025-05-25 03:08:07,814 | INFO     | sum of square deviations: 8797783560.0
[2025-05-25 05:27:54] 2025-05-25 03:08:07,818 | INFO     | sum of deviations: 33716187607.000004
[2025-05-25 05:27:54] 2025-05-25 03:08:07,818 | INFO     | mean x: 1748133108.0
[2025-05-25 05:27:54] 2025-05-25 03:08:07,818 | INFO     | mean y: 2478395.0786885247
[2025-05-25 05:27:54] 2025-05-25 03:08:07,818 | INFO     | -- intersect: -6696979875.2195635
[2025-05-25 05:27:54] 2025-05-25 03:08:07,818 | INFO     | intersect: -6696979875.2195635
[2025-05-25 05:27:54] 2025-05-25 03:08:07,819 | INFO     | chi2: 2.299954137831108
[2025-05-25 05:27:54] 2025-05-25 03:08:07,820 | INFO     | sum of square deviations: 8372156975.0
[2025-05-25 05:27:54] 2025-05-25 03:08:07,823 | INFO     | sum of deviations: 54000358671.49999
[2025-05-25 05:27:54] 2025-05-25 03:08:07,823 | INFO     | mean x: 1748132955.5
[2025-05-25 05:27:54] 2025-05-25 03:08:07,823 | INFO     | mean y: 2485562.3366666664
[2025-05-25 05:27:54] 2025-05-25 03:08:07,824 | INFO     | -- intersect: -11272960763.425678
[2025-05-25 05:27:54] 2025-05-25 03:08:07,824 | INFO     | intersect: -11272960763.425678
[2025-05-25 05:27:54] 2025-05-25 03:08:07,824 | INFO     | chi2: 1.4573941125754366
[2025-05-25 05:27:54] 2025-05-25 03:08:07,824 | INFO     | current chi2=1.4573941125754366 (change=36.63377505649823 %)
[2025-05-25 05:27:54] 2025-05-25 03:08:07,825 | INFO     | sum of square deviations: 7960484140.0
[2025-05-25 05:27:54] 2025-05-25 03:08:07,828 | INFO     | sum of deviations: 52832256160.0
[2025-05-25 05:27:54] 2025-05-25 03:08:07,828 | INFO     | mean x: 1748132803.0
[2025-05-25 05:27:54] 2025-05-25 03:08:07,828 | INFO     | mean y: 2485129.5864406778
[2025-05-25 05:27:54] 2025-05-25 03:08:07,829 | INFO     | -- intersect: -11599547915.830168
[2025-05-25 05:27:54] 2025-05-25 03:08:07,829 | INFO     | intersect: -11599547915.830168
[2025-05-25 05:27:54] 2025-05-25 03:08:07,829 | INFO     | chi2: 1.4577428282800071
[2025-05-25 05:27:54] 2025-05-25 03:08:07,829 | INFO     | current chi2=1.4577428282800071 (change=-0.02392734412480087 %)
[2025-05-25 05:27:54] 2025-05-25 03:08:07,829 | INFO     | right removable region: 294
[2025-05-25 05:27:54] 2025-05-25 03:08:07,830 | INFO     | sum of square deviations: 8372156975.0
[2025-05-25 05:27:54] 2025-05-25 03:08:07,833 | INFO     | sum of deviations: -12495033515.000002
[2025-05-25 05:27:54] 2025-05-25 03:08:07,834 | INFO     | mean x: 1748133260.5
[2025-05-25 05:27:54] 2025-05-25 03:08:07,834 | INFO     | mean y: 2494830.2333333334
[2025-05-25 05:27:54] 2025-05-25 03:08:07,834 | INFO     | -- intersect: 2611497951.3953953
[2025-05-25 05:27:54] 2025-05-25 03:08:07,834 | INFO     | intersect: 2611497951.3953953
[2025-05-25 05:27:54] 2025-05-25 03:08:07,835 | INFO     | chi2: 0.8943666667174676
[2025-05-25 05:27:54] 2025-05-25 03:08:07,835 | INFO     | current chi2=0.8943666667174676 (change=61.11371735608305 %)
[2025-05-25 05:27:54] 2025-05-25 03:08:07,836 | INFO     | sum of square deviations: 7960484140.0
[2025-05-25 05:27:54] 2025-05-25 03:08:07,839 | INFO     | sum of deviations: -10989475008.0
[2025-05-25 05:27:54] 2025-05-25 03:08:07,839 | INFO     | mean x: 1748133413.0
[2025-05-25 05:27:54] 2025-05-25 03:08:07,839 | INFO     | mean y: 2494253.13220339
[2025-05-25 05:27:54] 2025-05-25 03:08:07,839 | INFO     | -- intersect: 2415798282.755362
[2025-05-25 05:27:54] 2025-05-25 03:08:07,840 | INFO     | intersect: 2415798282.755362
[2025-05-25 05:27:54] 2025-05-25 03:08:07,840 | INFO     | chi2: 0.8784171155090852
[2025-05-25 05:27:54] 2025-05-25 03:08:07,840 | INFO     | current chi2=0.8784171155090852 (change=1.7833347106864923 %)
[2025-05-25 05:27:54] 2025-05-25 03:08:07,840 | INFO     | left removable region: 20
[2025-05-25 05:27:54] 2025-05-25 03:08:07,841 | INFO     | sum of square deviations: 6378584712.5
[2025-05-25 05:27:54] 2025-05-25 03:08:07,844 | INFO     | sum of deviations: 8980359610.0
[2025-05-25 05:27:54] 2025-05-25 03:08:07,844 | INFO     | mean x: 1748133382.5
[2025-05-25 05:27:54] 2025-05-25 03:08:07,844 | INFO     | mean y: 2501750.2408759124
[2025-05-25 05:27:54] 2025-05-25 03:08:07,844 | INFO     | -- intersect: -2458681588.8046794
[2025-05-25 05:27:54] 2025-05-25 03:08:07,844 | INFO     | intersect: -2458681588.8046794
[2025-05-25 05:27:54] 2025-05-25 03:08:07,845 | INFO     | chi2: 0.0012480197047537393
[2025-05-25 05:27:54] 2025-05-25 03:08:07,845 | INFO     | -- intersect: -2458681588.8046794
[2025-05-25 05:27:54] 2025-05-25 03:08:07,845 | INFO     | current memory leak: 1.41 B/s (using 274 data points, chi2=0.00)
[2025-05-25 05:27:54] 2025-05-25 03:08:07,846 | INFO     | ..............................
[2025-05-25 05:27:54] 2025-05-25 03:08:07,846 | INFO     | . Timing measurements:
[2025-05-25 05:27:54] 2025-05-25 03:08:07,846 | INFO     | . get job = 0 s
[2025-05-25 05:27:54] 2025-05-25 03:08:07,846 | INFO     | . initial setup = 2 s
[2025-05-25 05:27:54] 2025-05-25 03:08:07,847 | INFO     | . payload setup = 12 s
[2025-05-25 05:27:54] 2025-05-25 03:08:07,847 | INFO     | . stage-in = 0 s
[2025-05-25 05:27:54] 2025-05-25 03:08:07,847 | INFO     | . payload execution = 18582 s
[2025-05-25 05:27:54] 2025-05-25 03:08:07,847 | INFO     | . stage-out = 4 s
[2025-05-25 05:27:54] 2025-05-25 03:08:07,847 | INFO     | . log creation = 1 s
[2025-05-25 05:27:54] 2025-05-25 03:08:07,847 | INFO     | ..............................
[2025-05-25 05:27:54] 2025-05-25 03:08:07,990 | INFO     | 
[2025-05-25 05:27:54] 2025-05-25 03:08:07,990 | INFO     | job summary report
[2025-05-25 05:27:54] 2025-05-25 03:08:07,990 | INFO     | --------------------------------------------------
[2025-05-25 05:27:54] 2025-05-25 03:08:07,990 | INFO     | PanDA job id: 6665377864
[2025-05-25 05:27:54] 2025-05-25 03:08:07,991 | INFO     | task id: 44871837
[2025-05-25 05:27:54] 2025-05-25 03:08:07,991 | INFO     | errors: (none)
[2025-05-25 05:27:54] 2025-05-25 03:08:07,991 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 05:27:54] 2025-05-25 03:08:07,991 | INFO     | pilot state: finished 
[2025-05-25 05:27:54] 2025-05-25 03:08:07,991 | INFO     | transexitcode: 0
[2025-05-25 05:27:54] 2025-05-25 03:08:07,991 | INFO     | exeerrorcode: 0
[2025-05-25 05:27:54] 2025-05-25 03:08:07,991 | INFO     | exeerrordiag: 
[2025-05-25 05:27:54] 2025-05-25 03:08:07,991 | INFO     | exitcode: 0
[2025-05-25 05:27:54] 2025-05-25 03:08:07,992 | INFO     | exitmsg: OK
[2025-05-25 05:27:54] 2025-05-25 03:08:07,992 | INFO     | cpuconsumptiontime: 71617 s
[2025-05-25 05:27:54] 2025-05-25 03:08:07,992 | INFO     | nevents: 400
[2025-05-25 05:27:54] 2025-05-25 03:08:07,992 | INFO     | neventsw: 0
[2025-05-25 05:27:54] 2025-05-25 03:08:07,992 | INFO     | pid: 32638
[2025-05-25 05:27:54] 2025-05-25 03:08:07,992 | INFO     | pgrp: 32638
[2025-05-25 05:27:54] 2025-05-25 03:08:07,992 | INFO     | corecount: 8
[2025-05-25 05:27:54] 2025-05-25 03:08:07,992 | INFO     | event service: False
[2025-05-25 05:27:54] 2025-05-25 03:08:07,993 | INFO     | sizes: {0: 2392911, 1: 2393767, 2: 2393767, 12: 2393795, 13: 2394029, 23: 2394085, 18599: 2426143, 18605: 2435084, 18606: 2435140, 18686: 2435310}
[2025-05-25 05:27:54] 2025-05-25 03:08:07,993 | INFO     | --------------------------------------------------
[2025-05-25 05:27:54] 2025-05-25 03:08:07,993 | INFO     | 
[2025-05-25 05:27:54] 2025-05-25 03:08:07,993 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-05-25 05:27:54] 2025-05-25 03:08:08,021 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 05:27:54] 2025-05-25 03:08:08,021 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 05:27:54] 2025-05-25 03:08:08,022 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 05:27:54] 2025-05-25 03:08:08,022 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 05:27:54] 2025-05-25 03:08:08,022 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 05:27:54] 2025-05-25 03:08:08,022 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 05:27:54] 2025-05-25 03:08:08,022 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 05:27:54] 2025-05-25 03:08:08,022 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 05:27:54] 2025-05-25 03:08:08,022 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 05:27:54] 2025-05-25 03:08:08,022 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 05:27:54] 2025-05-25 03:08:08,023 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 05:27:54] 2025-05-25 03:08:08,023 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 05:27:54] 2025-05-25 03:08:08,023 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 05:27:54] 2025-05-25 03:08:08,023 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 05:27:54] 2025-05-25 03:08:08,023 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 05:27:54] 2025-05-25 03:08:08,023 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 05:27:54] 2025-05-25 03:08:08,023 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 05:27:54] 2025-05-25 03:08:08,023 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 05:27:54] 2025-05-25 03:08:08,024 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 05:27:54] 2025-05-25 03:08:08,024 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 05:27:54] 2025-05-25 03:08:08,025 | INFO     | job 6665377864 has completed (purged errors)
[2025-05-25 05:27:54] 2025-05-25 03:08:08,025 | INFO     | overall cleanup function is called
[2025-05-25 05:27:54] 2025-05-25 03:08:09,034 | INFO     | --- collectZombieJob: --- 10, [32638]
[2025-05-25 05:27:54] 2025-05-25 03:08:09,034 | INFO     | zombie collector waiting for pid 32638
[2025-05-25 05:27:54] 2025-05-25 03:08:09,034 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 05:27:54] 2025-05-25 03:08:09,034 | INFO     | collected zombie processes
[2025-05-25 05:27:54] 2025-05-25 03:08:09,034 | INFO     | will attempt to kill all subprocesses of pid=32638
[2025-05-25 05:27:54] 2025-05-25 03:08:09,150 | INFO     | process IDs to be killed: [32638] (in reverse order)
[2025-05-25 05:27:54] 2025-05-25 03:08:09,934 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 05:27:54] 2025-05-25 03:08:09,935 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 05:27:54] 2025-05-25 03:08:09,938 | INFO     | did not find any defunct processes belonging to 32638
[2025-05-25 05:27:54] 2025-05-25 03:08:09,941 | INFO     | did not find any defunct processes belonging to 32638
[2025-05-25 05:27:54] 2025-05-25 03:08:09,942 | INFO     | ready for new job
[2025-05-25 05:27:54] 2025-05-25 03:08:09,942 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 05:27:54] 2025-05-25 03:08:09,945 | INFO     | **************************************
[2025-05-25 05:27:54] 2025-05-25 03:08:09,945 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 05:27:54] 2025-05-25 03:08:09,945 | INFO     | **************************************
[2025-05-25 05:27:54] 2025-05-25 03:08:09,945 | INFO     | 
[2025-05-25 05:27:54] 2025-05-25 03:08:09,946 | INFO     | pilot is running in a VM
[2025-05-25 05:27:54] 2025-05-25 03:08:09,946 | INFO     | architecture information:
[2025-05-25 05:27:54] 2025-05-25 03:08:09,952 | INFO     | executing command: cat /etc/os-release
[2025-05-25 05:27:54] 2025-05-25 03:08:10,093 | INFO     | cat /etc/os-release:
[2025-05-25 05:27:54] NAME="CentOS Linux"
[2025-05-25 05:27:54] VERSION="7 (Core)"
[2025-05-25 05:27:54] ID="centos"
[2025-05-25 05:27:54] ID_LIKE="rhel fedora"
[2025-05-25 05:27:54] VERSION_ID="7"
[2025-05-25 05:27:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 05:27:54] ANSI_COLOR="0;31"
[2025-05-25 05:27:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 05:27:54] HOME_URL="https://www.centos.org/"
[2025-05-25 05:27:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 05:27:54] 
[2025-05-25 05:27:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 05:27:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 05:27:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 05:27:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 05:27:54] 
[2025-05-25 05:27:54] 2025-05-25 03:08:10,094 | INFO     | **************************************
[2025-05-25 05:27:54] 2025-05-25 03:08:10,597 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-05-25 05:27:54] 2025-05-25 03:08:10,720 | INFO     | sufficient remaining disk space (496872980480 B)
[2025-05-25 05:27:54] 2025-05-25 03:08:10,721 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 05:27:54] 2025-05-25 03:08:10,721 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 05:27:54] 2025-05-25 03:08:10,721 | INFO     | update_server=False
[2025-05-25 05:27:54] 2025-05-25 03:08:10,721 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 05:27:54] 2025-05-25 03:08:10,722 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 05:27:54] 2025-05-25 03:08:10,729 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 05:27:54] 2025-05-25 03:08:10,729 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 05:27:54] 2025-05-25 03:08:10,729 | INFO     | aborting loop
[2025-05-25 05:27:54] 2025-05-25 03:08:10,738 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 05:27:54] 2025-05-25 03:08:10,738 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 05:27:54] 2025-05-25 03:08:10,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 05:27:54] 2025-05-25 03:08:10,739 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 05:27:54] 2025-05-25 03:08:11,114 | INFO     | all data control threads have been joined
[2025-05-25 05:27:54] 2025-05-25 03:08:11,727 | INFO     | [job] retrieve thread has finished
[2025-05-25 05:27:54] 2025-05-25 03:08:11,735 | INFO     | [job] job monitor thread has finished
[2025-05-25 05:27:54] 2025-05-25 03:08:11,842 | INFO     | all payload control threads have been joined
[2025-05-25 05:27:54] 2025-05-25 03:08:11,914 | INFO     | [job] validate thread has finished
[2025-05-25 05:27:54] 2025-05-25 03:08:12,027 | INFO     | all job control threads have been joined
[2025-05-25 05:27:54] 2025-05-25 03:08:12,120 | INFO     | [data] control thread has finished
[2025-05-25 05:27:54] 2025-05-25 03:08:12,233 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 05:27:54] 2025-05-25 03:08:12,329 | INFO     | [payload] validate_post thread has finished
[2025-05-25 05:27:54] 2025-05-25 03:08:12,390 | INFO     | [data] copytool_in thread has finished
[2025-05-25 05:27:54] 2025-05-25 03:08:12,423 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 05:27:54] 2025-05-25 03:08:12,487 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 05:27:54] 2025-05-25 03:08:12,671 | INFO     | [payload] failed_post thread has finished
[2025-05-25 05:27:54] 2025-05-25 03:08:12,729 | INFO     | [data] copytool_out thread has finished
[2025-05-25 05:27:54] 2025-05-25 03:08:12,848 | INFO     | [payload] control thread has finished
[2025-05-25 05:27:54] 2025-05-25 03:08:13,005 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 05:27:54] 2025-05-25 03:08:13,033 | INFO     | [job] control thread has finished
[2025-05-25 05:27:54] 2025-05-25 03:08:14,011 | INFO     | [job] queue monitor thread has finished
[2025-05-25 05:27:54] 2025-05-25 03:08:14,737 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 05:27:54] 2025-05-25 03:08:21,178 | INFO     | job.realtimelogging is not enabled
[2025-05-25 05:27:54] 2025-05-25 03:08:22,184 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 05:27:54] 2025-05-25 03:08:22,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140350907955008)>', '<ExcThread(monitor, started 140350328923904)>']
[2025-05-25 05:27:54] 2025-05-25 03:08:23,815 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 05:27:54] 2025-05-25 03:08:23,815 | INFO     | [monitor] control thread has ended
[2025-05-25 05:27:54] 2025-05-25 03:08:27,997 | INFO     | all workflow threads have been joined
[2025-05-25 05:27:54] 2025-05-25 03:08:27,997 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 05:27:54] 2025-05-25 03:08:27,997 | INFO     | traces error code: 0
[2025-05-25 05:27:54] 2025-05-25 03:08:27,998 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 05:27:54] 2025-05-25 03:08:28,279 [wrapper] ==== pilot stdout END ====
[2025-05-25 05:27:54] 2025-05-25 03:08:28,399 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 05:27:54] 2025-05-25 03:08:28,461 [wrapper] pilotpid: 22032
[2025-05-25 05:27:54] 2025-05-25 03:08:28,519 [wrapper] Pilot exit status: 0
[2025-05-25 05:27:54] 2025-05-25 03:08:29,011 [wrapper] pandaids: 6665377864
[2025-05-25 05:27:54] 2025-05-25 03:08:30,051 [wrapper] cleanup supervisor_pilot  7078 22033
[2025-05-25 05:27:54] 2025-05-25 03:08:30,110 [wrapper] Test setup, not cleaning
[2025-05-25 05:27:54] 2025-05-25 03:08:30,199 [wrapper] apfmon messages muted
[2025-05-25 05:27:54] 2025-05-25 03:08:30,299 [wrapper] ==== wrapper stdout END ====
[2025-05-25 05:27:54] 2025-05-25 03:08:30,400 [wrapper] ==== wrapper stderr END ====
[2025-05-25 05:27:54]  *** Error codes and diagnostics ***
[2025-05-25 05:27:54]     "exeErrorCode": 0,
[2025-05-25 05:27:54]     "exeErrorDiag": "",
[2025-05-25 05:27:54]     "pilotErrorCode": 0,
[2025-05-25 05:27:54]     "pilotErrorDiag": "",
[2025-05-25 05:27:54]  *** Listing of results directory ***
[2025-05-25 05:27:54] total 422644
[2025-05-25 05:27:54] -rw-r--r--. 1 boinc boinc    495897 May 24 11:36 pilot3.tar.gz
[2025-05-25 05:27:54] -rwx------. 1 boinc boinc     37140 May 24 11:42 runpilot2-wrapper.sh
[2025-05-25 05:27:54] -rw-r--r--. 1 boinc boinc      5111 May 24 11:42 queuedata.json
[2025-05-25 05:27:54] -rw-r--r--. 1 boinc boinc       100 May 24 23:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 05:27:54] -rwxr-xr-x. 1 boinc boinc      7986 May 24 23:55 run_atlas
[2025-05-25 05:27:54] -rw-r--r--. 1 boinc boinc       105 May 24 23:55 job.xml
[2025-05-25 05:27:54] -rw-r--r--. 2 boinc boinc 226319204 May 24 23:55 EVNT.44871834._000579.pool.root.1
[2025-05-25 05:27:54] -rw-r--r--. 2 boinc boinc     15093 May 24 23:55 start_atlas.sh
[2025-05-25 05:27:54] drwxrwx--x. 2 boinc boinc        68 May 24 23:55 shared
[2025-05-25 05:27:54] -rw-r--r--. 2 boinc boinc    508878 May 24 23:55 input.tar.gz
[2025-05-25 05:27:54] -rw-r--r--. 1 boinc boinc      6372 May 24 23:55 init_data.xml
[2025-05-25 05:27:54] -rw-r--r--. 1 boinc boinc         0 May 24 23:55 boinc_lockfile
[2025-05-25 05:27:54] -rw-r--r--. 1 boinc boinc      2558 May 24 23:55 pandaJob.out
[2025-05-25 05:27:54] -rw-------. 1 boinc boinc    990803 May 24 23:56 agis_schedconf.cvmfs.json
[2025-05-25 05:27:54] drwx------. 4 boinc boinc      4096 May 24 23:56 pilot3
[2025-05-25 05:27:54] -rw-------. 1 boinc boinc 198566595 May 25 05:05 HITS.44871837._014463.pool.root.1
[2025-05-25 05:27:54] -rw-r--r--. 1 boinc boinc       531 May 25 05:05 boinc_task_state.xml
[2025-05-25 05:27:54] -rw-------. 1 boinc boinc      1017 May 25 05:06 memory_monitor_summary.json
[2025-05-25 05:27:54] -rw-------. 1 boinc boinc   1596740 May 25 05:06 agis_ddmendpoints.agis.ALL.json
[2025-05-25 05:27:54] -rw-------. 1 boinc boinc    421937 May 25 05:06 log.44871837._014463.job.log.tgz.1
[2025-05-25 05:27:54] -rw-------. 1 boinc boinc        95 May 25 05:07 pilot_heartbeat.json
[2025-05-25 05:27:54] -rw-------. 1 boinc boinc      7688 May 25 05:08 heartbeat.json
[2025-05-25 05:27:54] -rw-------. 1 boinc boinc      4611 May 25 05:08 pilotlog.txt
[2025-05-25 05:27:54] -rw-------. 1 boinc boinc   1620953 May 25 05:08 log.44871837._014463.job.log.1
[2025-05-25 05:27:54] -rw-------. 1 boinc boinc       357 May 25 05:08 output.list
[2025-05-25 05:27:54] -rw-r--r--. 1 boinc boinc       620 May 25 05:08 runtime_log
[2025-05-25 05:27:54] -rw-------. 1 boinc boinc   2058240 May 25 05:08 result.tar.gz
[2025-05-25 05:27:54] -rw-r--r--. 1 boinc boinc      8659 May 25 05:08 runtime_log.err
[2025-05-25 05:27:54] -rw-------. 1 boinc boinc       657 May 25 05:08 AuzLDmWZ0c7n9Rq4apOajLDm4fhM0noT9bVof3QYDmgTMKDmKXHp8m.diag
[2025-05-25 05:27:54] -rw-r--r--. 1 boinc boinc      8192 May 25 05:27 boinc_mmap_file
[2025-05-25 05:27:54] -rw-r--r--. 1 boinc boinc        28 May 25 05:27 wrapper_checkpoint.txt
[2025-05-25 05:27:54] -rw-r--r--. 1 boinc boinc     20501 May 25 05:27 stderr.txt
[2025-05-25 05:27:54] HITS file was successfully produced:
[2025-05-25 05:27:54] -rw-------. 1 boinc boinc 198566595 May 25 05:05 shared/HITS.pool.root.1
[2025-05-25 05:27:54]  *** Contents of shared directory: ***
[2025-05-25 05:27:54] total 417460
[2025-05-25 05:27:54] -rw-r--r--. 2 boinc boinc 226319204 May 24 23:55 ATLAS.root_0
[2025-05-25 05:27:54] -rw-r--r--. 2 boinc boinc     15093 May 24 23:55 start_atlas.sh
[2025-05-25 05:27:54] -rw-r--r--. 2 boinc boinc    508878 May 24 23:55 input.tar.gz
[2025-05-25 05:27:54] -rw-------. 1 boinc boinc 198566595 May 25 05:05 HITS.pool.root.1
[2025-05-25 05:27:54] -rw-------. 1 boinc boinc   2058240 May 25 05:08 result.tar.gz
05:27:56 (18347): run_atlas exited; CPU time 71859.903920
05:27:56 (18347): called boinc_finish(0)

</stderr_txt>
]]>

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