Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:49:11 (12314): wrapper (7.7.26015): starting
21:49:11 (12314): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 21:49:11] Arguments: --nthreads 8
[2025-05-24 21:49:11] Threads: 8
[2025-05-24 21:49:11] Checking for CVMFS
[2025-05-24 21:49:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 21:49:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 21:49:12] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 21:49:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 21:49:13] 2.11.2.0 24996 17831 88820 146377 2 60 16925282 25165825 2563 130560 0 9396592 99.715 12669715 1920 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-24 21:49:13] CVMFS is ok
[2025-05-24 21:49:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 21:49:13] Checking for apptainer binary...
[2025-05-24 21:49:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 21:49:13] Running /usr/bin/apptainer --version
[2025-05-24 21:49:13] apptainer version 1.3.2-1.el7
[2025-05-24 21:49:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 22:19:38] cg-vwn259.simple-grid.lan
[2025-05-24 22:19:38] apptainer works
[2025-05-24 22:19:38] Set ATHENA_PROC_NUMBER=8
[2025-05-24 22:19:38] Set ATHENA_CORE_NUMBER=8
[2025-05-24 22:19:38] Starting ATLAS job with PandaID=6665276031
[2025-05-24 22:19:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/23 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 06:15:55]  *** The last 200 lines of the pilot log: ***
[2025-05-25 06:15:55] 2025-05-25 01:30:46,255 | INFO     | extracted standard info from prmon json
[2025-05-25 06:15:55] 2025-05-25 01:30:46,255 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 06:15:55] 2025-05-25 01:30:46,255 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 06:15:55] 2025-05-25 01:30:46,255 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 06:15:55] 2025-05-25 01:30:46,256 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 06:15:55] 2025-05-25 01:30:46,262 | INFO     | fitting pss+swap vs Time
[2025-05-25 06:15:55] 2025-05-25 01:30:46,262 | INFO     | sum of square deviations: 7879803557.5
[2025-05-25 06:15:55] 2025-05-25 01:30:46,266 | INFO     | sum of deviations: 42813093481.5
[2025-05-25 06:15:55] 2025-05-25 01:30:46,266 | INFO     | mean x: 1748127583.5
[2025-05-25 06:15:55] 2025-05-25 01:30:46,266 | INFO     | mean y: 2474566.5204081633
[2025-05-25 06:15:55] 2025-05-25 01:30:46,266 | INFO     | -- intersect: -9495573081.982052
[2025-05-25 06:15:55] 2025-05-25 01:30:46,266 | INFO     | intersect: -9495573081.982052
[2025-05-25 06:15:55] 2025-05-25 01:30:46,267 | INFO     | chi2: 5.46661042397163
[2025-05-25 06:15:55] 2025-05-25 01:30:46,267 | INFO     | sum of square deviations: 7484568240.0
[2025-05-25 06:15:55] 2025-05-25 01:30:46,270 | INFO     | sum of deviations: 61633236425.000015
[2025-05-25 06:15:55] 2025-05-25 01:30:46,270 | INFO     | mean x: 1748127431.0
[2025-05-25 06:15:55] 2025-05-25 01:30:46,270 | INFO     | mean y: 2481724.7958477507
[2025-05-25 06:15:55] 2025-05-25 01:30:46,271 | INFO     | -- intersect: -14392837791.437317
[2025-05-25 06:15:55] 2025-05-25 01:30:46,271 | INFO     | intersect: -14392837791.437317
[2025-05-25 06:15:55] 2025-05-25 01:30:46,271 | INFO     | chi2: 4.730374500073322
[2025-05-25 06:15:55] 2025-05-25 01:30:46,271 | INFO     | current chi2=4.730374500073322 (change=13.467868876659676 %)
[2025-05-25 06:15:55] 2025-05-25 01:30:46,271 | INFO     | right removable region: 288
[2025-05-25 06:15:55] 2025-05-25 01:30:46,272 | INFO     | sum of square deviations: 7484568240.0
[2025-05-25 06:15:55] 2025-05-25 01:30:46,275 | INFO     | sum of deviations: -52467663918.00001
[2025-05-25 06:15:55] 2025-05-25 01:30:46,275 | INFO     | mean x: 1748127736.0
[2025-05-25 06:15:55] 2025-05-25 01:30:46,276 | INFO     | mean y: 2511278.7162629757
[2025-05-25 06:15:55] 2025-05-25 01:30:46,276 | INFO     | -- intersect: 12257083031.833479
[2025-05-25 06:15:55] 2025-05-25 01:30:46,276 | INFO     | intersect: 12257083031.833479
[2025-05-25 06:15:55] 2025-05-25 01:30:46,276 | INFO     | chi2: 1.429909136312411
[2025-05-25 06:15:55] 2025-05-25 01:30:46,276 | INFO     | current chi2=1.429909136312411 (change=73.84285644277637 %)
[2025-05-25 06:15:55] 2025-05-25 01:30:46,277 | INFO     | sum of square deviations: 7102775035.0
[2025-05-25 06:15:55] 2025-05-25 01:30:46,280 | INFO     | sum of deviations: -74783828949.0
[2025-05-25 06:15:55] 2025-05-25 01:30:46,280 | INFO     | mean x: 1748127888.5
[2025-05-25 06:15:55] 2025-05-25 01:30:46,280 | INFO     | mean y: 2520122.7746478873
[2025-05-25 06:15:55] 2025-05-25 01:30:46,280 | INFO     | -- intersect: 18408241316.30257
[2025-05-25 06:15:55] 2025-05-25 01:30:46,281 | INFO     | intersect: 18408241316.30257
[2025-05-25 06:15:55] 2025-05-25 01:30:46,281 | INFO     | chi2: 1.0241011021467687
[2025-05-25 06:15:55] 2025-05-25 01:30:46,281 | INFO     | current chi2=1.0241011021467687 (change=28.37998750131631 %)
[2025-05-25 06:15:55] 2025-05-25 01:30:46,282 | INFO     | sum of square deviations: 6734191380.0
[2025-05-25 06:15:55] 2025-05-25 01:30:46,284 | INFO     | sum of deviations: -74271848446.0
[2025-05-25 06:15:55] 2025-05-25 01:30:46,285 | INFO     | mean x: 1748128041.0
[2025-05-25 06:15:55] 2025-05-25 01:30:46,285 | INFO     | mean y: 2519889.698924731
[2025-05-25 06:15:55] 2025-05-25 01:30:46,285 | INFO     | -- intersect: 19282741314.792263
[2025-05-25 06:15:55] 2025-05-25 01:30:46,285 | INFO     | intersect: 19282741314.792263
[2025-05-25 06:15:55] 2025-05-25 01:30:46,286 | INFO     | chi2: 1.0071942927574573
[2025-05-25 06:15:55] 2025-05-25 01:30:46,286 | INFO     | current chi2=1.0071942927574573 (change=1.6508926075629247 %)
[2025-05-25 06:15:55] 2025-05-25 01:30:46,286 | INFO     | left removable region: 30
[2025-05-25 06:15:55] 2025-05-25 01:30:46,286 | INFO     | sum of square deviations: 5325139844.5
[2025-05-25 06:15:55] 2025-05-25 01:30:46,289 | INFO     | sum of deviations: -26316155180.000004
[2025-05-25 06:15:55] 2025-05-25 01:30:46,289 | INFO     | mean x: 1748128315.5
[2025-05-25 06:15:55] 2025-05-25 01:30:46,289 | INFO     | mean y: 2515321.7054263568
[2025-05-25 06:15:55] 2025-05-25 01:30:46,289 | INFO     | -- intersect: 8641540280.41419
[2025-05-25 06:15:55] 2025-05-25 01:30:46,289 | INFO     | intersect: 8641540280.41419
[2025-05-25 06:15:55] 2025-05-25 01:30:46,290 | INFO     | chi2: 0.15340007055289842
[2025-05-25 06:15:55] 2025-05-25 01:30:46,290 | INFO     | -- intersect: 8641540280.41419
[2025-05-25 06:15:55] 2025-05-25 01:30:46,290 | INFO     | current memory leak: -4.94 B/s (using 258 data points, chi2=0.15)
[2025-05-25 06:15:55] 2025-05-25 01:30:46,291 | INFO     | ..............................
[2025-05-25 06:15:55] 2025-05-25 01:30:46,291 | INFO     | . Timing measurements:
[2025-05-25 06:15:55] 2025-05-25 01:30:46,291 | INFO     | . get job = 0 s
[2025-05-25 06:15:55] 2025-05-25 01:30:46,291 | INFO     | . initial setup = 7 s
[2025-05-25 06:15:55] 2025-05-25 01:30:46,291 | INFO     | . payload setup = 157 s
[2025-05-25 06:15:55] 2025-05-25 01:30:46,291 | INFO     | . stage-in = 0 s
[2025-05-25 06:15:55] 2025-05-25 01:30:46,292 | INFO     | . payload execution = 18058 s
[2025-05-25 06:15:55] 2025-05-25 01:30:46,292 | INFO     | . stage-out = 3 s
[2025-05-25 06:15:55] 2025-05-25 01:30:46,292 | INFO     | . log creation = 1 s
[2025-05-25 06:15:55] 2025-05-25 01:30:46,292 | INFO     | ..............................
[2025-05-25 06:15:55] 2025-05-25 01:30:46,415 | INFO     | 
[2025-05-25 06:15:55] 2025-05-25 01:30:46,415 | INFO     | job summary report
[2025-05-25 06:15:55] 2025-05-25 01:30:46,415 | INFO     | --------------------------------------------------
[2025-05-25 06:15:55] 2025-05-25 01:30:46,415 | INFO     | PanDA job id: 6665276031
[2025-05-25 06:15:55] 2025-05-25 01:30:46,415 | INFO     | task id: 44871837
[2025-05-25 06:15:55] 2025-05-25 01:30:46,416 | INFO     | errors: (none)
[2025-05-25 06:15:55] 2025-05-25 01:30:46,416 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 06:15:55] 2025-05-25 01:30:46,416 | INFO     | pilot state: finished 
[2025-05-25 06:15:55] 2025-05-25 01:30:46,416 | INFO     | transexitcode: 0
[2025-05-25 06:15:55] 2025-05-25 01:30:46,416 | INFO     | exeerrorcode: 0
[2025-05-25 06:15:55] 2025-05-25 01:30:46,416 | INFO     | exeerrordiag: 
[2025-05-25 06:15:55] 2025-05-25 01:30:46,416 | INFO     | exitcode: 0
[2025-05-25 06:15:55] 2025-05-25 01:30:46,416 | INFO     | exitmsg: OK
[2025-05-25 06:15:55] 2025-05-25 01:30:46,416 | INFO     | cpuconsumptiontime: 68260 s
[2025-05-25 06:15:55] 2025-05-25 01:30:46,416 | INFO     | nevents: 400
[2025-05-25 06:15:55] 2025-05-25 01:30:46,417 | INFO     | neventsw: 0
[2025-05-25 06:15:55] 2025-05-25 01:30:46,417 | INFO     | pid: 11398
[2025-05-25 06:15:55] 2025-05-25 01:30:46,417 | INFO     | pgrp: 11398
[2025-05-25 06:15:55] 2025-05-25 01:30:46,417 | INFO     | corecount: 8
[2025-05-25 06:15:55] 2025-05-25 01:30:46,417 | INFO     | event service: False
[2025-05-25 06:15:55] 2025-05-25 01:30:46,417 | INFO     | sizes: {0: 2393566, 1: 2393765, 12: 2393765, 22: 2393793, 33: 2393821, 44: 2393877, 55: 2394033, 65: 2394061, 76: 2394089, 85: 2394351, 87: 2394379, 18219: 2426312
[2025-05-25 06:15:55] 2025-05-25 01:30:46,417 | INFO     | --------------------------------------------------
[2025-05-25 06:15:55] 2025-05-25 01:30:46,417 | INFO     | 
[2025-05-25 06:15:55] 2025-05-25 01:30:46,417 | INFO     | executing command: ls -lF /var/lib/boinc/slots/23
[2025-05-25 06:15:55] 2025-05-25 01:30:46,565 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 06:15:55] 2025-05-25 01:30:46,565 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 06:15:55] 2025-05-25 01:30:46,565 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 06:15:55] 2025-05-25 01:30:46,565 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 06:15:55] 2025-05-25 01:30:46,565 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 06:15:55] 2025-05-25 01:30:46,565 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 06:15:55] 2025-05-25 01:30:46,565 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 06:15:55] 2025-05-25 01:30:46,566 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 06:15:55] 2025-05-25 01:30:46,566 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 06:15:55] 2025-05-25 01:30:46,566 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 06:15:55] 2025-05-25 01:30:46,566 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 06:15:55] 2025-05-25 01:30:46,566 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 06:15:55] 2025-05-25 01:30:46,566 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 06:15:55] 2025-05-25 01:30:46,566 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 06:15:55] 2025-05-25 01:30:46,566 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 06:15:55] 2025-05-25 01:30:46,566 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 06:15:55] 2025-05-25 01:30:46,567 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 06:15:55] 2025-05-25 01:30:46,567 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 06:15:55] 2025-05-25 01:30:46,567 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 06:15:55] 2025-05-25 01:30:46,567 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 06:15:55] 2025-05-25 01:30:46,567 | INFO     | job 6665276031 has completed (purged errors)
[2025-05-25 06:15:55] 2025-05-25 01:30:46,567 | INFO     | overall cleanup function is called
[2025-05-25 06:15:55] 2025-05-25 01:30:47,577 | INFO     | --- collectZombieJob: --- 10, [11398]
[2025-05-25 06:15:55] 2025-05-25 01:30:47,577 | INFO     | zombie collector waiting for pid 11398
[2025-05-25 06:15:55] 2025-05-25 01:30:47,577 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 06:15:55] 2025-05-25 01:30:47,577 | INFO     | collected zombie processes
[2025-05-25 06:15:55] 2025-05-25 01:30:47,578 | INFO     | will attempt to kill all subprocesses of pid=11398
[2025-05-25 06:15:55] 2025-05-25 01:30:47,684 | INFO     | process IDs to be killed: [11398] (in reverse order)
[2025-05-25 06:15:55] 2025-05-25 01:30:47,830 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 06:15:55] 2025-05-25 01:30:47,831 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 06:15:55] 2025-05-25 01:30:47,834 | INFO     | did not find any defunct processes belonging to 11398
[2025-05-25 06:15:55] 2025-05-25 01:30:47,836 | INFO     | did not find any defunct processes belonging to 11398
[2025-05-25 06:15:55] 2025-05-25 01:30:47,836 | INFO     | ready for new job
[2025-05-25 06:15:55] 2025-05-25 01:30:47,837 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 06:15:55] 2025-05-25 01:30:47,838 | INFO     | **************************************
[2025-05-25 06:15:55] 2025-05-25 01:30:47,839 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 06:15:55] 2025-05-25 01:30:47,839 | INFO     | **************************************
[2025-05-25 06:15:55] 2025-05-25 01:30:47,839 | INFO     | 
[2025-05-25 06:15:55] 2025-05-25 01:30:47,839 | INFO     | pilot is running in a VM
[2025-05-25 06:15:55] 2025-05-25 01:30:47,839 | INFO     | architecture information:
[2025-05-25 06:15:55] 2025-05-25 01:30:47,856 | INFO     | executing command: cat /etc/os-release
[2025-05-25 06:15:55] 2025-05-25 01:30:48,142 | INFO     | cat /etc/os-release:
[2025-05-25 06:15:55] NAME="CentOS Linux"
[2025-05-25 06:15:55] VERSION="7 (Core)"
[2025-05-25 06:15:55] ID="centos"
[2025-05-25 06:15:55] ID_LIKE="rhel fedora"
[2025-05-25 06:15:55] VERSION_ID="7"
[2025-05-25 06:15:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 06:15:55] ANSI_COLOR="0;31"
[2025-05-25 06:15:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 06:15:55] HOME_URL="https://www.centos.org/"
[2025-05-25 06:15:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 06:15:55] 
[2025-05-25 06:15:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 06:15:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 06:15:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 06:15:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 06:15:55] 
[2025-05-25 06:15:55] 2025-05-25 01:30:48,142 | INFO     | **************************************
[2025-05-25 06:15:55] 2025-05-25 01:30:48,646 | INFO     | executing command: df -mP /var/lib/boinc/slots/23
[2025-05-25 06:15:55] 2025-05-25 01:30:48,860 | INFO     | sufficient remaining disk space (495615737856 B)
[2025-05-25 06:15:55] 2025-05-25 01:30:48,861 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 06:15:55] 2025-05-25 01:30:48,861 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 06:15:55] 2025-05-25 01:30:48,861 | INFO     | update_server=False
[2025-05-25 06:15:55] 2025-05-25 01:30:48,861 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 06:15:55] 2025-05-25 01:30:48,861 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 06:15:55] 2025-05-25 01:30:48,861 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 06:15:55] 2025-05-25 01:30:48,862 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 06:15:55] 2025-05-25 01:30:48,862 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 06:15:55] 2025-05-25 01:30:48,865 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 06:15:55] 2025-05-25 01:30:48,865 | INFO     | aborting loop
[2025-05-25 06:15:55] 2025-05-25 01:30:48,868 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 06:15:55] 2025-05-25 01:30:49,767 | INFO     | all data control threads have been joined
[2025-05-25 06:15:55] 2025-05-25 01:30:49,867 | INFO     | [job] retrieve thread has finished
[2025-05-25 06:15:55] 2025-05-25 01:30:49,870 | INFO     | [job] job monitor thread has finished
[2025-05-25 06:15:55] 2025-05-25 01:30:49,964 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 06:15:55] 2025-05-25 01:30:50,196 | INFO     | all job control threads have been joined
[2025-05-25 06:15:55] 2025-05-25 01:30:50,204 | INFO     | all payload control threads have been joined
[2025-05-25 06:15:55] 2025-05-25 01:30:50,614 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 06:15:55] 2025-05-25 01:30:50,673 | INFO     | [payload] validate_post thread has finished
[2025-05-25 06:15:55] 2025-05-25 01:30:50,773 | INFO     | [data] control thread has finished
[2025-05-25 06:15:55] 2025-05-25 01:30:50,777 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 06:15:55] 2025-05-25 01:30:50,878 | INFO     | [data] copytool_out thread has finished
[2025-05-25 06:15:55] 2025-05-25 01:30:50,911 | INFO     | [job] validate thread has finished
[2025-05-25 06:15:55] 2025-05-25 01:30:50,920 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 06:15:55] 2025-05-25 01:30:51,174 | INFO     | [data] copytool_in thread has finished
[2025-05-25 06:15:55] 2025-05-25 01:30:51,202 | INFO     | [job] control thread has finished
[2025-05-25 06:15:55] 2025-05-25 01:30:51,210 | INFO     | [payload] control thread has finished
[2025-05-25 06:15:55] 2025-05-25 01:30:51,430 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 06:15:55] 2025-05-25 01:30:51,431 | INFO     | [payload] failed_post thread has finished
[2025-05-25 06:15:55] 2025-05-25 01:30:51,864 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 06:15:55] 2025-05-25 01:30:52,436 | INFO     | [job] queue monitor thread has finished
[2025-05-25 06:15:55] 2025-05-25 01:30:55,873 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 06:15:55] 2025-05-25 01:30:55,954 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140263233648448)>', '<ExcThread(monitor, started 140262777001728)>']
[2025-05-25 06:15:55] 2025-05-25 01:30:56,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 06:15:55] 2025-05-25 01:30:56,908 | INFO     | [monitor] control thread has ended
[2025-05-25 06:15:55] 2025-05-25 01:31:00,980 | INFO     | all workflow threads have been joined
[2025-05-25 06:15:55] 2025-05-25 01:31:00,980 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 06:15:55] 2025-05-25 01:31:00,980 | INFO     | traces error code: 0
[2025-05-25 06:15:55] 2025-05-25 01:31:00,981 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 06:15:55] 2025-05-25 01:31:01,257 [wrapper] ==== pilot stdout END ====
[2025-05-25 06:15:55] 2025-05-25 01:31:01,327 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 06:15:55] 2025-05-25 01:31:01,372 [wrapper] pilotpid: 824
[2025-05-25 06:15:55] 2025-05-25 01:31:01,441 [wrapper] Pilot exit status: 0
[2025-05-25 06:15:55] 2025-05-25 01:31:01,790 [wrapper] pandaids: 6665276031
[2025-05-25 06:15:55] 2025-05-25 01:31:02,641 [wrapper] cleanup supervisor_pilot  7596 825
[2025-05-25 06:15:55] 2025-05-25 01:31:02,689 [wrapper] Test setup, not cleaning
[2025-05-25 06:15:55] 2025-05-25 01:31:02,766 [wrapper] apfmon messages muted
[2025-05-25 06:15:55] 2025-05-25 01:31:02,797 [wrapper] ==== wrapper stdout END ====
[2025-05-25 06:15:55] 2025-05-25 01:31:02,900 [wrapper] ==== wrapper stderr END ====
[2025-05-25 06:15:55]  *** Error codes and diagnostics ***
[2025-05-25 06:15:55]     "exeErrorCode": 0,
[2025-05-25 06:15:55]     "exeErrorDiag": "",
[2025-05-25 06:15:55]     "pilotErrorCode": 0,
[2025-05-25 06:15:55]     "pilotErrorDiag": "",
[2025-05-25 06:15:55]  *** Listing of results directory ***
[2025-05-25 06:15:55] total 412260
[2025-05-25 06:15:55] -rw-r--r--. 1 boinc boinc    495897 May 24 08:52 pilot3.tar.gz
[2025-05-25 06:15:55] -rw-r--r--. 1 boinc boinc      5111 May 24 09:00 queuedata.json
[2025-05-25 06:15:55] -rwx------. 1 boinc boinc     37140 May 24 09:00 runpilot2-wrapper.sh
[2025-05-25 06:15:55] -rw-r--r--. 1 boinc boinc       100 May 24 21:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 06:15:55] -rwxr-xr-x. 1 boinc boinc      7986 May 24 21:49 run_atlas
[2025-05-25 06:15:55] -rw-r--r--. 1 boinc boinc       105 May 24 21:49 job.xml
[2025-05-25 06:15:55] -rw-r--r--. 2 boinc boinc     15093 May 24 21:49 start_atlas.sh
[2025-05-25 06:15:55] drwxrwx--x. 2 boinc boinc        68 May 24 21:49 shared
[2025-05-25 06:15:55] -rw-r--r--. 2 boinc boinc    508872 May 24 21:49 input.tar.gz
[2025-05-25 06:15:55] -rw-r--r--. 1 boinc boinc      6370 May 24 21:49 init_data.xml
[2025-05-25 06:15:55] -rw-r--r--. 2 boinc boinc 224847829 May 24 21:49 EVNT.44871834._000353.pool.root.1
[2025-05-25 06:15:55] -rw-r--r--. 1 boinc boinc         0 May 24 21:49 boinc_lockfile
[2025-05-25 06:15:55] -rw-r--r--. 1 boinc boinc      2557 May 24 22:19 pandaJob.out
[2025-05-25 06:15:55] -rw-------. 1 boinc boinc    990811 May 24 22:22 agis_schedconf.cvmfs.json
[2025-05-25 06:15:55] drwx------. 4 boinc boinc      4096 May 24 22:22 pilot3
[2025-05-25 06:15:55] -rw-------. 1 boinc boinc 189475581 May 25 03:28 HITS.44871837._008825.pool.root.1
[2025-05-25 06:15:55] -rw-r--r--. 1 boinc boinc       531 May 25 03:28 boinc_task_state.xml
[2025-05-25 06:15:55] -rw-------. 1 boinc boinc      1021 May 25 03:29 memory_monitor_summary.json
[2025-05-25 06:15:55] -rw-------. 1 boinc boinc   1596740 May 25 03:29 agis_ddmendpoints.agis.ALL.json
[2025-05-25 06:15:55] -rw-------. 1 boinc boinc    437986 May 25 03:29 log.44871837._008825.job.log.tgz.1
[2025-05-25 06:15:55] -rw-------. 1 boinc boinc        95 May 25 03:29 pilot_heartbeat.json
[2025-05-25 06:15:55] -rw-------. 1 boinc boinc      7693 May 25 03:30 heartbeat.json
[2025-05-25 06:15:55] -rw-------. 1 boinc boinc      4540 May 25 03:31 pilotlog.txt
[2025-05-25 06:15:55] -rw-------. 1 boinc boinc   1568951 May 25 03:31 log.44871837._008825.job.log.1
[2025-05-25 06:15:55] -rw-------. 1 boinc boinc       357 May 25 03:31 output.list
[2025-05-25 06:15:55] -rw-r--r--. 1 boinc boinc       620 May 25 03:31 runtime_log
[2025-05-25 06:15:55] -rw-------. 1 boinc boinc   2027520 May 25 03:31 result.tar.gz
[2025-05-25 06:15:55] -rw-r--r--. 1 boinc boinc      8673 May 25 03:31 runtime_log.err
[2025-05-25 06:15:55] -rw-------. 1 boinc boinc       657 May 25 03:31 HfjMDmF3xc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmDuLKDm4O6ftm.diag
[2025-05-25 06:15:55] -rw-r--r--. 1 boinc boinc      8192 May 25 06:15 boinc_mmap_file
[2025-05-25 06:15:55] -rw-r--r--. 1 boinc boinc        28 May 25 06:15 wrapper_checkpoint.txt
[2025-05-25 06:15:55] -rw-r--r--. 1 boinc boinc     20504 May 25 06:15 stderr.txt
[2025-05-25 06:15:55] HITS file was successfully produced:
[2025-05-25 06:15:55] -rw-------. 1 boinc boinc 189475581 May 25 03:28 shared/HITS.pool.root.1
[2025-05-25 06:15:55]  *** Contents of shared directory: ***
[2025-05-25 06:15:55] total 407112
[2025-05-25 06:15:55] -rw-r--r--. 2 boinc boinc     15093 May 24 21:49 start_atlas.sh
[2025-05-25 06:15:55] -rw-r--r--. 2 boinc boinc    508872 May 24 21:49 input.tar.gz
[2025-05-25 06:15:55] -rw-r--r--. 2 boinc boinc 224847829 May 24 21:49 ATLAS.root_0
[2025-05-25 06:15:55] -rw-------. 1 boinc boinc 189475581 May 25 03:28 HITS.pool.root.1
[2025-05-25 06:15:55] -rw-------. 1 boinc boinc   2027520 May 25 03:31 result.tar.gz
06:15:57 (12314): run_atlas exited; CPU time 68522.036719
06:15:57 (12314): called boinc_finish(0)

</stderr_txt>
]]>

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