Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:32:31 (1064078): wrapper (7.7.26015): starting
13:32:31 (1064078): wrapper: running run_atlas (--nthreads 9)
[2025-05-24 13:32:31] Arguments: --nthreads 9
[2025-05-24 13:32:31] Threads: 9
[2025-05-24 13:32:31] Checking for CVMFS
[2025-05-24 13:32:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 13:32:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 13:32:32] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 13:32:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 13:32:33] 2.12.6.0 5047 15915 310212 146374 2 302 19782973 32935937 14526 16776704 1 37447397 99.573 48953198 23306 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 13:32:33] CVMFS is ok
[2025-05-24 13:32:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 13:32:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 13:32:33] Further information can be found at the LHC@home message board.
[2025-05-24 13:32:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 13:32:33] Checking for apptainer binary...
[2025-05-24 13:32:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 13:32:33] Running /usr/bin/apptainer --version
[2025-05-24 13:32:34] apptainer version 1.4.1-1.el9
[2025-05-24 13:32:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 13:32:35] c6-6-39-2.aglt2.org
[2025-05-24 13:32:35] apptainer works
[2025-05-24 13:32:35] Set ATHENA_PROC_NUMBER=9
[2025-05-24 13:32:35] Set ATHENA_CORE_NUMBER=9
[2025-05-24 13:32:35] Starting ATLAS job with PandaID=6665275980
[2025-05-24 13:32:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 18:49:21]  *** The last 200 lines of the pilot log: ***
[2025-05-24 18:49:21] 2025-05-24 22:48:57,631 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 18:49:21] 2025-05-24 22:48:57,631 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 18:49:21] 2025-05-24 22:48:57,632 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 18:49:21] 2025-05-24 22:48:57,632 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 18:49:21] 2025-05-24 22:48:57,959 | INFO     | fitting pss+swap vs Time
[2025-05-24 18:49:21] 2025-05-24 22:48:57,960 | INFO     | sum of square deviations: 8972329719.100924
[2025-05-24 18:49:21] 2025-05-24 22:48:57,962 | INFO     | sum of deviations: -39681737769.83061
[2025-05-24 18:49:21] 2025-05-24 22:48:57,962 | INFO     | mean x: 1748117496.5732899
[2025-05-24 18:49:21] 2025-05-24 22:48:57,962 | INFO     | mean y: 2170587.7035830617
[2025-05-24 18:49:21] 2025-05-24 22:48:58,043 | INFO     | -- intersect: 7733533819.061194
[2025-05-24 18:49:21] 2025-05-24 22:48:58,043 | INFO     | intersect: 7733533819.061194
[2025-05-24 18:49:21] 2025-05-24 22:48:58,043 | INFO     | chi2: 3.812730555544309
[2025-05-24 18:49:21] 2025-05-24 22:48:58,044 | INFO     | sum of square deviations: 8541072983.24836
[2025-05-24 18:49:21] 2025-05-24 22:48:58,046 | INFO     | sum of deviations: 4151012317.7549815
[2025-05-24 18:49:21] 2025-05-24 22:48:58,046 | INFO     | mean x: 1748117344.076159
[2025-05-24 18:49:21] 2025-05-24 22:48:58,046 | INFO     | mean y: 2185990.271523179
[2025-05-24 18:49:21] 2025-05-24 22:48:58,046 | INFO     | -- intersect: -847409446.0832974
[2025-05-24 18:49:21] 2025-05-24 22:48:58,046 | INFO     | intersect: -847409446.0832974
[2025-05-24 18:49:21] 2025-05-24 22:48:58,082 | INFO     | chi2: 2.3024451247977624
[2025-05-24 18:49:21] 2025-05-24 22:48:58,082 | INFO     | current chi2=2.3024451247977624 (change=39.61164862673955 %)
[2025-05-24 18:49:21] 2025-05-24 22:48:58,082 | INFO     | sum of square deviations: 8123770901.097614
[2025-05-24 18:49:21] 2025-05-24 22:48:58,084 | INFO     | sum of deviations: 8759075246.484852
[2025-05-24 18:49:21] 2025-05-24 22:48:58,085 | INFO     | mean x: 1748117191.5622895
[2025-05-24 18:49:21] 2025-05-24 22:48:58,085 | INFO     | mean y: 2187663.757575758
[2025-05-24 18:49:21] 2025-05-24 22:48:58,085 | INFO     | -- intersect: -1882637771.0043838
[2025-05-24 18:49:21] 2025-05-24 22:48:58,085 | INFO     | intersect: -1882637771.0043838
[2025-05-24 18:49:21] 2025-05-24 22:48:58,150 | INFO     | chi2: 2.2892675059575365
[2025-05-24 18:49:21] 2025-05-24 22:48:58,151 | INFO     | current chi2=2.2892675059575365 (change=0.5723315052463375 %)
[2025-05-24 18:49:21] 2025-05-24 22:48:58,151 | INFO     | right removable region: 296
[2025-05-24 18:49:21] 2025-05-24 22:48:58,151 | INFO     | sum of square deviations: 8541002834.930451
[2025-05-24 18:49:21] 2025-05-24 22:48:58,153 | INFO     | sum of deviations: -88493713710.54636
[2025-05-24 18:49:21] 2025-05-24 22:48:58,154 | INFO     | mean x: 1748117649.0827816
[2025-05-24 18:49:21] 2025-05-24 22:48:58,154 | INFO     | mean y: 2187756.2218543044
[2025-05-24 18:49:21] 2025-05-24 22:48:58,154 | INFO     | -- intersect: 18114513177.49596
[2025-05-24 18:49:21] 2025-05-24 22:48:58,154 | INFO     | intersect: 18114513177.49596
[2025-05-24 18:49:21] 2025-05-24 22:48:58,154 | INFO     | chi2: 2.1534833429967737
[2025-05-24 18:49:21] 2025-05-24 22:48:58,183 | INFO     | current chi2=2.1534833429967737 (change=43.51860663572801 %)
[2025-05-24 18:49:21] 2025-05-24 22:48:58,183 | INFO     | sum of square deviations: 8123759080.060618
[2025-05-24 18:49:21] 2025-05-24 22:48:58,185 | INFO     | sum of deviations: -86911802097.36368
[2025-05-24 18:49:21] 2025-05-24 22:48:58,185 | INFO     | mean x: 1748117801.5858586
[2025-05-24 18:49:21] 2025-05-24 22:48:58,185 | INFO     | mean y: 2187139.484848485
[2025-05-24 18:49:21] 2025-05-24 22:48:58,185 | INFO     | -- intersect: 18704374995.74694
[2025-05-24 18:49:21] 2025-05-24 22:48:58,186 | INFO     | intersect: 18704374995.74694
[2025-05-24 18:49:21] 2025-05-24 22:48:58,186 | INFO     | chi2: 2.0894517639435217
[2025-05-24 18:49:21] 2025-05-24 22:48:58,186 | INFO     | current chi2=2.0894517639435217 (change=2.9733956039867033 %)
[2025-05-24 18:49:21] 2025-05-24 22:48:58,186 | INFO     | left removable region: 20
[2025-05-24 18:49:21] 2025-05-24 22:48:58,208 | INFO     | sum of square deviations: 6519525974.550717
[2025-05-24 18:49:21] 2025-05-24 22:48:58,210 | INFO     | sum of deviations: -13562313564.246368
[2025-05-24 18:49:21] 2025-05-24 22:48:58,210 | INFO     | mean x: 1748117771.0724638
[2025-05-24 18:49:21] 2025-05-24 22:48:58,210 | INFO     | mean y: 2195347.862318841
[2025-05-24 18:49:21] 2025-05-24 22:48:58,210 | INFO     | -- intersect: 3638736018.3134465
[2025-05-24 18:49:21] 2025-05-24 22:48:58,210 | INFO     | intersect: 3638736018.3134465
[2025-05-24 18:49:21] 2025-05-24 22:48:58,210 | INFO     | chi2: 0.4115233757381199
[2025-05-24 18:49:21] 2025-05-24 22:48:58,211 | INFO     | -- intersect: 3638736018.3134465
[2025-05-24 18:49:21] 2025-05-24 22:48:58,211 | INFO     | current memory leak: -2.08 B/s (using 276 data points, chi2=0.41)
[2025-05-24 18:49:21] 2025-05-24 22:48:58,233 | INFO     | ..............................
[2025-05-24 18:49:21] 2025-05-24 22:48:58,233 | INFO     | . Timing measurements:
[2025-05-24 18:49:21] 2025-05-24 22:48:58,233 | INFO     | . get job = 1 s
[2025-05-24 18:49:21] 2025-05-24 22:48:58,233 | INFO     | . initial setup = 5 s
[2025-05-24 18:49:21] 2025-05-24 22:48:58,233 | INFO     | . payload setup = 45 s
[2025-05-24 18:49:21] 2025-05-24 22:48:58,233 | INFO     | . stage-in = 0 s
[2025-05-24 18:49:21] 2025-05-24 22:48:58,233 | INFO     | . payload execution = 18744 s
[2025-05-24 18:49:21] 2025-05-24 22:48:58,233 | INFO     | . stage-out = 10 s
[2025-05-24 18:49:21] 2025-05-24 22:48:58,233 | INFO     | . log creation = 1 s
[2025-05-24 18:49:21] 2025-05-24 22:48:58,234 | INFO     | ..............................
[2025-05-24 18:49:21] 2025-05-24 22:48:59,937 | INFO     | 
[2025-05-24 18:49:21] 2025-05-24 22:48:59,937 | INFO     | job summary report
[2025-05-24 18:49:21] 2025-05-24 22:48:59,937 | INFO     | --------------------------------------------------
[2025-05-24 18:49:21] 2025-05-24 22:48:59,937 | INFO     | PanDA job id: 6665275980
[2025-05-24 18:49:21] 2025-05-24 22:48:59,937 | INFO     | task id: 44871837
[2025-05-24 18:49:21] 2025-05-24 22:48:59,937 | INFO     | errors: (none)
[2025-05-24 18:49:21] 2025-05-24 22:48:59,937 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 18:49:21] 2025-05-24 22:48:59,937 | INFO     | pilot state: finished 
[2025-05-24 18:49:21] 2025-05-24 22:48:59,937 | INFO     | transexitcode: 0
[2025-05-24 18:49:21] 2025-05-24 22:48:59,937 | INFO     | exeerrorcode: 0
[2025-05-24 18:49:21] 2025-05-24 22:48:59,938 | INFO     | exeerrordiag: 
[2025-05-24 18:49:21] 2025-05-24 22:48:59,938 | INFO     | exitcode: 0
[2025-05-24 18:49:21] 2025-05-24 22:48:59,938 | INFO     | exitmsg: OK
[2025-05-24 18:49:21] 2025-05-24 22:48:59,938 | INFO     | cpuconsumptiontime: 50912 s
[2025-05-24 18:49:21] 2025-05-24 22:48:59,938 | INFO     | nevents: 400
[2025-05-24 18:49:21] 2025-05-24 22:48:59,938 | INFO     | neventsw: 0
[2025-05-24 18:49:21] 2025-05-24 22:48:59,938 | INFO     | pid: 1080300
[2025-05-24 18:49:21] 2025-05-24 22:48:59,938 | INFO     | pgrp: 1080300
[2025-05-24 18:49:21] 2025-05-24 22:48:59,938 | INFO     | corecount: 9
[2025-05-24 18:49:21] 2025-05-24 22:48:59,938 | INFO     | event service: False
[2025-05-24 18:49:21] 2025-05-24 22:48:59,938 | INFO     | sizes: {0: 2392906, 1: 2393591, 2: 2393790, 3: 2393818, 14: 2393818, 25: 2393846, 34: 2394208, 36: 2394236, 18793: 2426488, 18794: 2426487, 18805: 2435484, 18809: 
[2025-05-24 18:49:21] 2025-05-24 22:48:59,938 | INFO     | --------------------------------------------------
[2025-05-24 18:49:21] 2025-05-24 22:48:59,938 | INFO     | 
[2025-05-24 18:49:21] 2025-05-24 22:48:59,939 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-24 18:49:21] 2025-05-24 22:49:00,232 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 18:49:21] 2025-05-24 22:49:00,232 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 18:49:21] 2025-05-24 22:49:00,232 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 18:49:21] 2025-05-24 22:49:00,232 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 18:49:21] 2025-05-24 22:49:00,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 18:49:21] 2025-05-24 22:49:00,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 18:49:21] 2025-05-24 22:49:00,233 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 18:49:21] 2025-05-24 22:49:00,233 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 18:49:21] 2025-05-24 22:49:00,233 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 18:49:21] 2025-05-24 22:49:00,234 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 18:49:21] 2025-05-24 22:49:00,234 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 18:49:21] 2025-05-24 22:49:00,234 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 18:49:21] 2025-05-24 22:49:00,234 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 18:49:21] 2025-05-24 22:49:00,234 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 18:49:21] 2025-05-24 22:49:00,234 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 18:49:21] 2025-05-24 22:49:00,234 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 18:49:21] 2025-05-24 22:49:00,234 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 18:49:21] 2025-05-24 22:49:00,234 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 18:49:21] 2025-05-24 22:49:00,234 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 18:49:21] 2025-05-24 22:49:00,234 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 18:49:21] 2025-05-24 22:49:00,234 | INFO     | job 6665275980 has completed (purged errors)
[2025-05-24 18:49:21] 2025-05-24 22:49:00,234 | INFO     | overall cleanup function is called
[2025-05-24 18:49:21] 2025-05-24 22:49:01,372 | INFO     | --- collectZombieJob: --- 10, [1080300]
[2025-05-24 18:49:21] 2025-05-24 22:49:01,373 | INFO     | zombie collector waiting for pid 1080300
[2025-05-24 18:49:21] 2025-05-24 22:49:01,374 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 18:49:21] 2025-05-24 22:49:01,374 | INFO     | collected zombie processes
[2025-05-24 18:49:21] 2025-05-24 22:49:01,374 | INFO     | will attempt to kill all subprocesses of pid=1080300
[2025-05-24 18:49:21] 2025-05-24 22:49:02,640 | INFO     | PID=1069115 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-24 18:49:21] 2025-05-24 22:49:02,641 | INFO     | .. there are 26 such processes running
[2025-05-24 18:49:21] 2025-05-24 22:49:03,724 | INFO     | process IDs to be killed: [1080300] (in reverse order)
[2025-05-24 18:49:21] 2025-05-24 22:49:04,296 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 18:49:21] 2025-05-24 22:49:04,296 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 18:49:21] 2025-05-24 22:49:04,397 | INFO     | did not find any defunct processes belonging to 1080300
[2025-05-24 18:49:21] 2025-05-24 22:49:04,538 | INFO     | did not find any defunct processes belonging to 1080300
[2025-05-24 18:49:21] 2025-05-24 22:49:04,538 | INFO     | ready for new job
[2025-05-24 18:49:21] 2025-05-24 22:49:04,539 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 18:49:21] 2025-05-24 22:49:04,577 | INFO     | **************************************
[2025-05-24 18:49:21] 2025-05-24 22:49:04,577 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 18:49:21] 2025-05-24 22:49:04,577 | INFO     | **************************************
[2025-05-24 18:49:21] 2025-05-24 22:49:04,577 | INFO     | 
[2025-05-24 18:49:21] 2025-05-24 22:49:04,600 | INFO     | architecture information:
[2025-05-24 18:49:21] 2025-05-24 22:49:04,654 | INFO     | executing command: cat /etc/os-release
[2025-05-24 18:49:21] 2025-05-24 22:49:04,757 | INFO     | cat /etc/os-release:
[2025-05-24 18:49:21] NAME="CentOS Linux"
[2025-05-24 18:49:21] VERSION="7 (Core)"
[2025-05-24 18:49:21] ID="centos"
[2025-05-24 18:49:21] ID_LIKE="rhel fedora"
[2025-05-24 18:49:21] VERSION_ID="7"
[2025-05-24 18:49:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 18:49:21] ANSI_COLOR="0;31"
[2025-05-24 18:49:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 18:49:21] HOME_URL="https://www.centos.org/"
[2025-05-24 18:49:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 18:49:21] 
[2025-05-24 18:49:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 18:49:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 18:49:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 18:49:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 18:49:21] 
[2025-05-24 18:49:21] 2025-05-24 22:49:04,757 | INFO     | **************************************
[2025-05-24 18:49:21] 2025-05-24 22:49:05,261 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-24 18:49:21] 2025-05-24 22:49:05,447 | INFO     | sufficient remaining disk space (75267833856 B)
[2025-05-24 18:49:21] 2025-05-24 22:49:05,447 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 18:49:21] 2025-05-24 22:49:05,447 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 18:49:21] 2025-05-24 22:49:05,447 | INFO     | update_server=False
[2025-05-24 18:49:21] 2025-05-24 22:49:05,448 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 18:49:21] 2025-05-24 22:49:05,448 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 18:49:21] 2025-05-24 22:49:05,449 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 18:49:21] 2025-05-24 22:49:05,449 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 18:49:21] 2025-05-24 22:49:05,449 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 18:49:21] 2025-05-24 22:49:05,459 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 18:49:21] 2025-05-24 22:49:05,470 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 18:49:21] 2025-05-24 22:49:05,703 | INFO     | all data control threads have been joined
[2025-05-24 18:49:21] 2025-05-24 22:49:05,910 | INFO     | all payload control threads have been joined
[2025-05-24 18:49:21] 2025-05-24 22:49:06,132 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 18:49:21] 2025-05-24 22:49:06,133 | INFO     | aborting loop
[2025-05-24 18:49:21] 2025-05-24 22:49:06,454 | INFO     | [job] retrieve thread has finished
[2025-05-24 18:49:21] 2025-05-24 22:49:06,480 | INFO     | [job] queue monitor thread has finished
[2025-05-24 18:49:21] 2025-05-24 22:49:06,640 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 18:49:21] 2025-05-24 22:49:06,703 | INFO     | [data] copytool_in thread has finished
[2025-05-24 18:49:21] 2025-05-24 22:49:06,716 | INFO     | [data] control thread has finished
[2025-05-24 18:49:21] 2025-05-24 22:49:06,916 | INFO     | [payload] control thread has finished
[2025-05-24 18:49:21] 2025-05-24 22:49:07,076 | INFO     | all job control threads have been joined
[2025-05-24 18:49:21] 2025-05-24 22:49:07,139 | INFO     | [job] job monitor thread has finished
[2025-05-24 18:49:21] 2025-05-24 22:49:07,150 | INFO     | [payload] failed_post thread has finished
[2025-05-24 18:49:21] 2025-05-24 22:49:07,466 | INFO     | [data] copytool_out thread has finished
[2025-05-24 18:49:21] 2025-05-24 22:49:07,618 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 18:49:21] 2025-05-24 22:49:07,640 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 18:49:21] 2025-05-24 22:49:07,645 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 18:49:21] 2025-05-24 22:49:07,669 | INFO     | [job] validate thread has finished
[2025-05-24 18:49:21] 2025-05-24 22:49:07,670 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 18:49:21] 2025-05-24 22:49:07,737 | INFO     | [payload] validate_post thread has finished
[2025-05-24 18:49:21] 2025-05-24 22:49:08,081 | INFO     | [job] control thread has finished
[2025-05-24 18:49:21] 2025-05-24 22:49:11,627 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 18:49:21] 2025-05-24 22:49:12,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139690677339968)>', '<ExcThread(monitor, started 139690036418304)>']
[2025-05-24 18:49:21] 2025-05-24 22:49:12,520 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 18:49:21] 2025-05-24 22:49:12,521 | INFO     | [monitor] control thread has ended
[2025-05-24 18:49:21] 2025-05-24 22:49:17,446 | INFO     | all workflow threads have been joined
[2025-05-24 18:49:21] 2025-05-24 22:49:17,447 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 18:49:21] 2025-05-24 22:49:17,447 | INFO     | traces error code: 0
[2025-05-24 18:49:21] 2025-05-24 22:49:17,447 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 18:49:21] 2025-05-24 22:49:19,343 [wrapper] ==== pilot stdout END ====
[2025-05-24 18:49:21] 2025-05-24 22:49:19,393 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 18:49:21] 2025-05-24 22:49:19,436 [wrapper] pilotpid: 1069115
[2025-05-24 18:49:21] 2025-05-24 22:49:19,477 [wrapper] Pilot exit status: 0
[2025-05-24 18:49:21] 2025-05-24 22:49:19,606 [wrapper] pandaids: 6665275980
[2025-05-24 18:49:21] 2025-05-24 22:49:20,353 [wrapper] cleanup supervisor_pilot 2387762 1069116
[2025-05-24 18:49:21] 2025-05-24 22:49:20,411 [wrapper] Test setup, not cleaning
[2025-05-24 18:49:21] 2025-05-24 22:49:20,452 [wrapper] apfmon messages muted
[2025-05-24 18:49:21] 2025-05-24 22:49:20,474 [wrapper] ==== wrapper stdout END ====
[2025-05-24 18:49:21] 2025-05-24 22:49:20,495 [wrapper] ==== wrapper stderr END ====
[2025-05-24 18:49:21]  *** Error codes and diagnostics ***
[2025-05-24 18:49:21]     "exeErrorCode": 0,
[2025-05-24 18:49:21]     "exeErrorDiag": "",
[2025-05-24 18:49:21]     "pilotErrorCode": 0,
[2025-05-24 18:49:21]     "pilotErrorDiag": "",
[2025-05-24 18:49:21]  *** Listing of results directory ***
[2025-05-24 18:49:21] total 422468
[2025-05-24 18:49:21] -rw-r--r--. 1 boincer umatlas    495897 May 24 02:52 pilot3.tar.gz
[2025-05-24 18:49:21] -rw-r--r--. 1 boincer umatlas      5111 May 24 02:53 queuedata.json
[2025-05-24 18:49:21] -rwx------. 1 boincer umatlas     37140 May 24 02:55 runpilot2-wrapper.sh
[2025-05-24 18:49:21] -rw-r--r--. 1 boincer umatlas       100 May 24 13:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 18:49:21] -rwxr-xr-x. 1 boincer umatlas      7986 May 24 13:32 run_atlas
[2025-05-24 18:49:21] -rw-r--r--. 1 boincer umatlas       105 May 24 13:32 job.xml
[2025-05-24 18:49:21] -rw-r--r--. 2 boincer umatlas 225348571 May 24 13:32 EVNT.44871834._000351.pool.root.1
[2025-05-24 18:49:21] -rw-r--r--. 2 boincer umatlas     15093 May 24 13:32 start_atlas.sh
[2025-05-24 18:49:21] drwxrwx--x. 2 boincer umatlas      4096 May 24 13:32 shared
[2025-05-24 18:49:21] -rw-r--r--. 2 boincer umatlas    508874 May 24 13:32 input.tar.gz
[2025-05-24 18:49:21] -rw-r--r--. 1 boincer umatlas         0 May 24 13:32 boinc_lockfile
[2025-05-24 18:49:21] -rw-r--r--. 1 boincer umatlas      2555 May 24 13:32 pandaJob.out
[2025-05-24 18:49:21] -rw-------. 1 boincer umatlas    988572 May 24 13:33 agis_schedconf.cvmfs.json
[2025-05-24 18:49:21] drwx------. 4 boincer umatlas      4096 May 24 13:33 pilot3
[2025-05-24 18:49:21] -rw-------. 1 boincer umatlas 199675014 May 24 18:45 HITS.44871837._008774.pool.root.1
[2025-05-24 18:49:21] -rw-r--r--. 1 boincer umatlas       530 May 24 18:45 boinc_task_state.xml
[2025-05-24 18:49:21] -rw-r--r--. 1 boincer umatlas      6841 May 24 18:46 init_data.xml
[2025-05-24 18:49:21] -rw-------. 1 boincer umatlas      1040 May 24 18:47 memory_monitor_summary.json
[2025-05-24 18:49:21] -rw-------. 1 boincer umatlas   1596740 May 24 18:48 agis_ddmendpoints.agis.ALL.json
[2025-05-24 18:49:21] -rw-------. 1 boincer umatlas    450762 May 24 18:48 log.44871837._008774.job.log.tgz.1
[2025-05-24 18:49:21] -rw-------. 1 boincer umatlas        95 May 24 18:48 pilot_heartbeat.json
[2025-05-24 18:49:21] -rw-------. 1 boincer umatlas      7723 May 24 18:48 heartbeat.json
[2025-05-24 18:49:21] -rw-------. 1 boincer umatlas      4476 May 24 18:49 pilotlog.txt
[2025-05-24 18:49:21] -rw-r--r--. 1 boincer umatlas        28 May 24 18:49 wrapper_checkpoint.txt
[2025-05-24 18:49:21] -rw-r--r--. 1 boincer umatlas      8192 May 24 18:49 boinc_mmap_file
[2025-05-24 18:49:21] -rw-------. 1 boincer umatlas   1427680 May 24 18:49 log.44871837._008774.job.log.1
[2025-05-24 18:49:21] -rw-------. 1 boincer umatlas       357 May 24 18:49 output.list
[2025-05-24 18:49:21] -rw-r--r--. 1 boincer umatlas       620 May 24 18:49 runtime_log
[2025-05-24 18:49:21] -rw-------. 1 boincer umatlas   1894400 May 24 18:49 result.tar.gz
[2025-05-24 18:49:21] -rw-r--r--. 1 boincer umatlas      8665 May 24 18:49 runtime_log.err
[2025-05-24 18:49:21] -rw-------. 1 boincer umatlas       657 May 24 18:49 p1cKDmcyxc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmGtLKDmNnvBfn.diag
[2025-05-24 18:49:21] -rw-r--r--. 1 boincer umatlas     21049 May 24 18:49 stderr.txt
[2025-05-24 18:49:21] HITS file was successfully produced:
[2025-05-24 18:49:21] -rw-------. 1 boincer umatlas 199675014 May 24 18:45 shared/HITS.pool.root.1
[2025-05-24 18:49:21]  *** Contents of shared directory: ***
[2025-05-24 18:49:21] total 417436
[2025-05-24 18:49:21] -rw-r--r--. 2 boincer umatlas 225348571 May 24 13:32 ATLAS.root_0
[2025-05-24 18:49:21] -rw-r--r--. 2 boincer umatlas     15093 May 24 13:32 start_atlas.sh
[2025-05-24 18:49:21] -rw-r--r--. 2 boincer umatlas    508874 May 24 13:32 input.tar.gz
[2025-05-24 18:49:21] -rw-------. 1 boincer umatlas 199675014 May 24 18:45 HITS.pool.root.1
[2025-05-24 18:49:21] -rw-------. 1 boincer umatlas   1894400 May 24 18:49 result.tar.gz
18:49:22 (1064078): run_atlas exited; CPU time 51412.186838
18:49:22 (1064078): called boinc_finish(0)

</stderr_txt>
]]>

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