Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:07:07 (604961): wrapper (7.7.26015): starting
10:07:07 (604961): wrapper: running run_atlas (--nthreads 2)
[2025-05-24 10:07:07] Arguments: --nthreads 2
[2025-05-24 10:07:07] Threads: 2
[2025-05-24 10:07:07] Checking for CVMFS
[2025-05-24 10:07:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 10:07:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 10:07:08] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 10:07:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 10:07:08] 2.12.7.0 199606 570 54076 146373 2 56 4870070 6144000 2769 130560 0 799850 99.990 223755 10489 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-05-24 10:07:08] CVMFS is ok
[2025-05-24 10:07:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 10:07:08] Small home clusters do not require a local http proxy but it is suggested if
[2025-05-24 10:07:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-05-24 10:07:08] Further information can be found at the LHC@home message board.
[2025-05-24 10:07:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 10:07:08] Checking for apptainer binary...
[2025-05-24 10:07:08] apptainer is not installed, using version from CVMFS
[2025-05-24 10:07:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 10:07:08] k8plus
[2025-05-24 10:07:08] apptainer works
[2025-05-24 10:07:08] Set ATHENA_PROC_NUMBER=2
[2025-05-24 10:07:08] Set ATHENA_CORE_NUMBER=2
[2025-05-24 10:07:08] Starting ATLAS job with PandaID=6665284568
[2025-05-24 10:07:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 14:16:57]  *** The last 200 lines of the pilot log: ***
[2025-05-24 14:16:57] 2025-05-24 21:16:43,094 | INFO     | extracted standard info from prmon json
[2025-05-24 14:16:57] 2025-05-24 21:16:43,094 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 14:16:57] 2025-05-24 21:16:43,094 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 14:16:57] 2025-05-24 21:16:43,094 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 14:16:57] 2025-05-24 21:16:43,094 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 14:16:57] 2025-05-24 21:16:43,096 | INFO     | fitting pss+swap vs Time
[2025-05-24 14:16:57] 2025-05-24 21:16:43,097 | INFO     | sum of square deviations: 4560048290.0
[2025-05-24 14:16:57] 2025-05-24 21:16:43,098 | INFO     | sum of deviations: 13689492570.999992
[2025-05-24 14:16:57] 2025-05-24 21:16:43,098 | INFO     | mean x: 1748113916.0
[2025-05-24 14:16:57] 2025-05-24 21:16:43,098 | INFO     | mean y: 2253070.579591837
[2025-05-24 14:16:57] 2025-05-24 21:16:43,098 | INFO     | -- intersect: -5245672158.3753195
[2025-05-24 14:16:57] 2025-05-24 21:16:43,098 | INFO     | intersect: -5245672158.3753195
[2025-05-24 14:16:57] 2025-05-24 21:16:43,098 | INFO     | chi2: 1.313867176147132
[2025-05-24 14:16:57] 2025-05-24 21:16:43,098 | INFO     | sum of square deviations: 4286517580.0
[2025-05-24 14:16:57] 2025-05-24 21:16:43,099 | INFO     | sum of deviations: 13196970976.500004
[2025-05-24 14:16:57] 2025-05-24 21:16:43,099 | INFO     | mean x: 1748113763.5
[2025-05-24 14:16:57] 2025-05-24 21:16:43,099 | INFO     | mean y: 2252795.9458333333
[2025-05-24 14:16:57] 2025-05-24 21:16:43,099 | INFO     | -- intersect: -5379693310.648623
[2025-05-24 14:16:57] 2025-05-24 21:16:43,099 | INFO     | intersect: -5379693310.648623
[2025-05-24 14:16:57] 2025-05-24 21:16:43,099 | INFO     | chi2: 1.3142188959070629
[2025-05-24 14:16:57] 2025-05-24 21:16:43,099 | INFO     | current chi2=1.3142188959070629 (change=-0.02676981100647959 %)
[2025-05-24 14:16:57] 2025-05-24 21:16:43,099 | INFO     | right removable region: 239
[2025-05-24 14:16:57] 2025-05-24 21:16:43,099 | INFO     | sum of square deviations: 4286517580.0
[2025-05-24 14:16:57] 2025-05-24 21:16:43,100 | INFO     | sum of deviations: -3396579033.5
[2025-05-24 14:16:57] 2025-05-24 21:16:43,100 | INFO     | mean x: 1748114068.5
[2025-05-24 14:16:57] 2025-05-24 21:16:43,100 | INFO     | mean y: 2262387.0625
[2025-05-24 14:16:57] 2025-05-24 21:16:43,100 | INFO     | -- intersect: 1387444526.7409012
[2025-05-24 14:16:57] 2025-05-24 21:16:43,100 | INFO     | intersect: 1387444526.7409012
[2025-05-24 14:16:57] 2025-05-24 21:16:43,100 | INFO     | chi2: 0.14269058947437616
[2025-05-24 14:16:57] 2025-05-24 21:16:43,100 | INFO     | current chi2=0.14269058947437616 (change=89.13964881192852 %)
[2025-05-24 14:16:57] 2025-05-24 21:16:43,101 | INFO     | sum of square deviations: 4024149870.0
[2025-05-24 14:16:57] 2025-05-24 21:16:43,101 | INFO     | sum of deviations: 10178174946.999998
[2025-05-24 14:16:57] 2025-05-24 21:16:43,101 | INFO     | mean x: 1748114221.0
[2025-05-24 14:16:57] 2025-05-24 21:16:43,101 | INFO     | mean y: 2254494.4340425534
[2025-05-24 14:16:57] 2025-05-24 21:16:43,101 | INFO     | -- intersect: -4419204184.657504
[2025-05-24 14:16:57] 2025-05-24 21:16:43,101 | INFO     | intersect: -4419204184.657504
[2025-05-24 14:16:57] 2025-05-24 21:16:43,102 | INFO     | chi2: 0.0015796476149419114
[2025-05-24 14:16:57] 2025-05-24 21:16:43,102 | INFO     | current chi2=0.0015796476149419114 (change=98.89295599607458 %)
[2025-05-24 14:16:57] 2025-05-24 21:16:43,102 | INFO     | sum of square deviations: 3772712597.5
[2025-05-24 14:16:57] 2025-05-24 21:16:43,102 | INFO     | sum of deviations: 9095937438.5
[2025-05-24 14:16:57] 2025-05-24 21:16:43,103 | INFO     | mean x: 1748114373.5
[2025-05-24 14:16:57] 2025-05-24 21:16:43,103 | INFO     | mean y: 2255150.0826086956
[2025-05-24 14:16:57] 2025-05-24 21:16:43,103 | INFO     | -- intersect: -4212414948.8894935
[2025-05-24 14:16:57] 2025-05-24 21:16:43,103 | INFO     | intersect: -4212414948.8894935
[2025-05-24 14:16:57] 2025-05-24 21:16:43,103 | INFO     | chi2: 0.0013977441791600802
[2025-05-24 14:16:57] 2025-05-24 21:16:43,103 | INFO     | current chi2=0.0013977441791600802 (change=11.515443954791166 %)
[2025-05-24 14:16:57] 2025-05-24 21:16:43,103 | INFO     | left removable region: 30
[2025-05-24 14:16:57] 2025-05-24 21:16:43,103 | INFO     | sum of square deviations: 2830787960.0
[2025-05-24 14:16:57] 2025-05-24 21:16:43,104 | INFO     | sum of deviations: 6822519929.0
[2025-05-24 14:16:57] 2025-05-24 21:16:43,104 | INFO     | mean x: 1748114648.0
[2025-05-24 14:16:57] 2025-05-24 21:16:43,104 | INFO     | mean y: 2256113.813397129
[2025-05-24 14:16:57] 2025-05-24 21:16:43,104 | INFO     | -- intersect: -4210898383.3382792
[2025-05-24 14:16:57] 2025-05-24 21:16:43,104 | INFO     | intersect: -4210898383.3382792
[2025-05-24 14:16:57] 2025-05-24 21:16:43,104 | INFO     | chi2: 0.0013159924462228375
[2025-05-24 14:16:57] 2025-05-24 21:16:43,104 | INFO     | -- intersect: -4210898383.3382792
[2025-05-24 14:16:57] 2025-05-24 21:16:43,104 | INFO     | current memory leak: 2.41 B/s (using 209 data points, chi2=0.00)
[2025-05-24 14:16:57] 2025-05-24 21:16:43,105 | INFO     | ..............................
[2025-05-24 14:16:57] 2025-05-24 21:16:43,105 | INFO     | . Timing measurements:
[2025-05-24 14:16:57] 2025-05-24 21:16:43,105 | INFO     | . get job = 0 s
[2025-05-24 14:16:57] 2025-05-24 21:16:43,105 | INFO     | . initial setup = 4 s
[2025-05-24 14:16:57] 2025-05-24 21:16:43,105 | INFO     | . payload setup = 10 s
[2025-05-24 14:16:57] 2025-05-24 21:16:43,105 | INFO     | . stage-in = 0 s
[2025-05-24 14:16:57] 2025-05-24 21:16:43,105 | INFO     | . payload execution = 14912 s
[2025-05-24 14:16:57] 2025-05-24 21:16:43,105 | INFO     | . stage-out = 3 s
[2025-05-24 14:16:57] 2025-05-24 21:16:43,105 | INFO     | . log creation = 0 s
[2025-05-24 14:16:57] 2025-05-24 21:16:43,105 | INFO     | ..............................
[2025-05-24 14:16:57] 2025-05-24 21:16:43,171 | INFO     | 
[2025-05-24 14:16:57] 2025-05-24 21:16:43,171 | INFO     | job summary report
[2025-05-24 14:16:57] 2025-05-24 21:16:43,171 | INFO     | --------------------------------------------------
[2025-05-24 14:16:57] 2025-05-24 21:16:43,171 | INFO     | PanDA job id: 6665284568
[2025-05-24 14:16:57] 2025-05-24 21:16:43,171 | INFO     | task id: 44871837
[2025-05-24 14:16:57] 2025-05-24 21:16:43,171 | INFO     | errors: (none)
[2025-05-24 14:16:57] 2025-05-24 21:16:43,172 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 14:16:57] 2025-05-24 21:16:43,172 | INFO     | pilot state: finished 
[2025-05-24 14:16:57] 2025-05-24 21:16:43,172 | INFO     | transexitcode: 0
[2025-05-24 14:16:57] 2025-05-24 21:16:43,172 | INFO     | exeerrorcode: 0
[2025-05-24 14:16:57] 2025-05-24 21:16:43,172 | INFO     | exeerrordiag: 
[2025-05-24 14:16:57] 2025-05-24 21:16:43,172 | INFO     | exitcode: 0
[2025-05-24 14:16:57] 2025-05-24 21:16:43,172 | INFO     | exitmsg: OK
[2025-05-24 14:16:57] 2025-05-24 21:16:43,172 | INFO     | cpuconsumptiontime: 29455 s
[2025-05-24 14:16:57] 2025-05-24 21:16:43,172 | INFO     | nevents: 400
[2025-05-24 14:16:57] 2025-05-24 21:16:43,172 | INFO     | neventsw: 0
[2025-05-24 14:16:57] 2025-05-24 21:16:43,172 | INFO     | pid: 615384
[2025-05-24 14:16:57] 2025-05-24 21:16:43,172 | INFO     | pgrp: 615384
[2025-05-24 14:16:57] 2025-05-24 21:16:43,172 | INFO     | corecount: 2
[2025-05-24 14:16:57] 2025-05-24 21:16:43,172 | INFO     | event service: False
[2025-05-24 14:16:57] 2025-05-24 21:16:43,172 | INFO     | sizes: {0: 2393747, 5: 2393953, 11: 2394009, 14926: 2424743, 14930: 2433698, 14932: 2433782, 14944: 2434080}
[2025-05-24 14:16:57] 2025-05-24 21:16:43,172 | INFO     | --------------------------------------------------
[2025-05-24 14:16:57] 2025-05-24 21:16:43,172 | INFO     | 
[2025-05-24 14:16:57] 2025-05-24 21:16:43,173 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2025-05-24 14:16:57] 2025-05-24 21:16:43,194 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | job 6665284568 has completed (purged errors)
[2025-05-24 14:16:57] 2025-05-24 21:16:43,195 | INFO     | overall cleanup function is called
[2025-05-24 14:16:57] 2025-05-24 21:16:43,252 | INFO     | PID=608686 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-24 14:16:57] 2025-05-24 21:16:43,253 | INFO     | .. there are 4 such processes running
[2025-05-24 14:16:57] 2025-05-24 21:16:44,202 | INFO     | --- collectZombieJob: --- 10, [615384]
[2025-05-24 14:16:57] 2025-05-24 21:16:44,203 | INFO     | zombie collector waiting for pid 615384
[2025-05-24 14:16:57] 2025-05-24 21:16:44,203 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 14:16:57] 2025-05-24 21:16:44,203 | INFO     | collected zombie processes
[2025-05-24 14:16:57] 2025-05-24 21:16:44,203 | INFO     | will attempt to kill all subprocesses of pid=615384
[2025-05-24 14:16:57] 2025-05-24 21:16:44,297 | INFO     | process IDs to be killed: [615384] (in reverse order)
[2025-05-24 14:16:57] 2025-05-24 21:16:44,421 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 14:16:57] 2025-05-24 21:16:44,421 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 14:16:57] 2025-05-24 21:16:44,425 | INFO     | did not find any defunct processes belonging to 615384
[2025-05-24 14:16:57] 2025-05-24 21:16:44,430 | INFO     | did not find any defunct processes belonging to 615384
[2025-05-24 14:16:57] 2025-05-24 21:16:44,430 | INFO     | ready for new job
[2025-05-24 14:16:57] 2025-05-24 21:16:44,431 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 14:16:57] 2025-05-24 21:16:44,432 | INFO     | **************************************
[2025-05-24 14:16:57] 2025-05-24 21:16:44,432 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 14:16:57] 2025-05-24 21:16:44,432 | INFO     | **************************************
[2025-05-24 14:16:57] 2025-05-24 21:16:44,433 | INFO     | 
[2025-05-24 14:16:57] 2025-05-24 21:16:44,433 | INFO     | architecture information:
[2025-05-24 14:16:57] 2025-05-24 21:16:44,434 | INFO     | executing command: cat /etc/os-release
[2025-05-24 14:16:57] 2025-05-24 21:16:44,461 | INFO     | cat /etc/os-release:
[2025-05-24 14:16:57] NAME="CentOS Linux"
[2025-05-24 14:16:57] VERSION="7 (Core)"
[2025-05-24 14:16:57] ID="centos"
[2025-05-24 14:16:57] ID_LIKE="rhel fedora"
[2025-05-24 14:16:57] VERSION_ID="7"
[2025-05-24 14:16:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 14:16:57] ANSI_COLOR="0;31"
[2025-05-24 14:16:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 14:16:57] HOME_URL="https://www.centos.org/"
[2025-05-24 14:16:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 14:16:57] 
[2025-05-24 14:16:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 14:16:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 14:16:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 14:16:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 14:16:57] 
[2025-05-24 14:16:57] 2025-05-24 21:16:44,462 | INFO     | **************************************
[2025-05-24 14:16:57] 2025-05-24 21:16:44,964 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2025-05-24 14:16:57] 2025-05-24 21:16:44,998 | INFO     | sufficient remaining disk space (144627990528 B)
[2025-05-24 14:16:57] 2025-05-24 21:16:44,998 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 14:16:57] 2025-05-24 21:16:44,998 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 14:16:57] 2025-05-24 21:16:44,999 | INFO     | update_server=False
[2025-05-24 14:16:57] 2025-05-24 21:16:44,999 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 14:16:57] 2025-05-24 21:16:44,999 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 14:16:57] 2025-05-24 21:16:44,999 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 14:16:57] 2025-05-24 21:16:45,257 | INFO     | all data control threads have been joined
[2025-05-24 14:16:57] 2025-05-24 21:16:45,259 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 14:16:57] 2025-05-24 21:16:45,260 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 14:16:57] 2025-05-24 21:16:45,260 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 14:16:57] 2025-05-24 21:16:45,425 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 14:16:57] 2025-05-24 21:16:45,426 | INFO     | aborting loop
[2025-05-24 14:16:57] 2025-05-24 21:16:46,003 | INFO     | [job] retrieve thread has finished
[2025-05-24 14:16:57] 2025-05-24 21:16:46,004 | INFO     | [job] queue monitor thread has finished
[2025-05-24 14:16:57] 2025-05-24 21:16:46,223 | INFO     | all job control threads have been joined
[2025-05-24 14:16:57] 2025-05-24 21:16:46,264 | INFO     | [data] control thread has finished
[2025-05-24 14:16:57] 2025-05-24 21:16:46,346 | INFO     | all payload control threads have been joined
[2025-05-24 14:16:57] 2025-05-24 21:16:46,431 | INFO     | [job] job monitor thread has finished
[2025-05-24 14:16:57] 2025-05-24 21:16:46,750 | INFO     | [payload] validate_post thread has finished
[2025-05-24 14:16:57] 2025-05-24 21:16:46,788 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 14:16:57] 2025-05-24 21:16:46,879 | INFO     | [payload] failed_post thread has finished
[2025-05-24 14:16:57] 2025-05-24 21:16:46,883 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 14:16:57] 2025-05-24 21:16:46,950 | INFO     | [job] validate thread has finished
[2025-05-24 14:16:57] 2025-05-24 21:16:47,003 | INFO     | [data] copytool_out thread has finished
[2025-05-24 14:16:57] 2025-05-24 21:16:47,229 | INFO     | [job] control thread has finished
[2025-05-24 14:16:57] 2025-05-24 21:16:47,271 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 14:16:57] 2025-05-24 21:16:47,313 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 14:16:57] 2025-05-24 21:16:47,314 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 14:16:57] 2025-05-24 21:16:47,351 | INFO     | [payload] control thread has finished
[2025-05-24 14:16:57] 2025-05-24 21:16:47,390 | INFO     | [data] copytool_in thread has finished
[2025-05-24 14:16:57] 2025-05-24 21:16:50,796 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 14:16:57] 2025-05-24 21:16:52,187 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126438245324608)>', '<ExcThread(monitor, started 126437688321792)>']
[2025-05-24 14:16:57] 2025-05-24 21:16:52,295 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 14:16:57] 2025-05-24 21:16:52,296 | INFO     | [monitor] control thread has ended
[2025-05-24 14:16:57] 2025-05-24 21:16:57,214 | INFO     | all workflow threads have been joined
[2025-05-24 14:16:57] 2025-05-24 21:16:57,215 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 14:16:57] 2025-05-24 21:16:57,215 | INFO     | traces error code: 0
[2025-05-24 14:16:57] 2025-05-24 21:16:57,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 14:16:57] 2025-05-24 21:16:57,402 [wrapper] ==== pilot stdout END ====
[2025-05-24 14:16:57] 2025-05-24 21:16:57,407 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 14:16:57] 2025-05-24 21:16:57,411 [wrapper] pilotpid: 608686
[2025-05-24 14:16:57] 2025-05-24 21:16:57,413 [wrapper] Pilot exit status: 0
[2025-05-24 14:16:57] 2025-05-24 21:16:57,423 [wrapper] pandaids: 6665284568
[2025-05-24 14:16:57] 2025-05-24 21:16:57,451 [wrapper] cleanup supervisor_pilot  799319 608687
[2025-05-24 14:16:57] 2025-05-24 21:16:57,453 [wrapper] Test setup, not cleaning
[2025-05-24 14:16:57] 2025-05-24 21:16:57,457 [wrapper] apfmon messages muted
[2025-05-24 14:16:57] 2025-05-24 21:16:57,460 [wrapper] ==== wrapper stdout END ====
[2025-05-24 14:16:57] 2025-05-24 21:16:57,462 [wrapper] ==== wrapper stderr END ====
[2025-05-24 14:16:57]  *** Error codes and diagnostics ***
[2025-05-24 14:16:57]     "exeErrorCode": 0,
[2025-05-24 14:16:57]     "exeErrorDiag": "",
[2025-05-24 14:16:57]     "pilotErrorCode": 0,
[2025-05-24 14:16:57]     "pilotErrorDiag": "",
[2025-05-24 14:16:57]  *** Listing of results directory ***
[2025-05-24 14:16:57] total 417472
[2025-05-24 14:16:57] -rw-r--r-- 1 boinc boinc    495897 May 24 00:50 pilot3.tar.gz
[2025-05-24 14:16:57] -rwx------ 1 boinc boinc     37140 May 24 01:01 runpilot2-wrapper.sh
[2025-05-24 14:16:57] -rw-r--r-- 1 boinc boinc      5111 May 24 01:01 queuedata.json
[2025-05-24 14:16:57] -rw-r--r-- 1 boinc boinc       100 May 24 10:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 14:16:57] -rwxr-xr-x 1 boinc boinc      7986 May 24 10:07 run_atlas
[2025-05-24 14:16:57] -rw-r--r-- 1 boinc boinc       105 May 24 10:07 job.xml
[2025-05-24 14:16:57] -rw-r--r-- 2 boinc boinc 226725985 May 24 10:07 EVNT.44871834._000453.pool.root.1
[2025-05-24 14:16:57] -rw-r--r-- 2 boinc boinc     15093 May 24 10:07 start_atlas.sh
[2025-05-24 14:16:57] drwxrwx--x 2 boinc boinc      4096 May 24 10:07 shared
[2025-05-24 14:16:57] -rw-r--r-- 2 boinc boinc    508880 May 24 10:07 input.tar.gz
[2025-05-24 14:16:57] -rw-r--r-- 1 boinc boinc      9896 May 24 10:07 init_data.xml
[2025-05-24 14:16:57] -rw-r--r-- 1 boinc boinc         0 May 24 10:07 boinc_setup_complete
[2025-05-24 14:16:57] -rw-r--r-- 1 boinc boinc         0 May 24 10:07 boinc_lockfile
[2025-05-24 14:16:57] -rw-r--r-- 1 boinc boinc      2559 May 24 10:07 pandaJob.out
[2025-05-24 14:16:57] -rw------- 1 boinc boinc    988572 May 24 10:07 agis_schedconf.cvmfs.json
[2025-05-24 14:16:57] drwx------ 4 boinc boinc      4096 May 24 10:07 pilot3
[2025-05-24 14:16:57] -rw------- 1 boinc boinc 193462542 May 24 14:16 HITS.44871837._011310.pool.root.1
[2025-05-24 14:16:57] -rw------- 1 boinc boinc        95 May 24 14:16 pilot_heartbeat.json
[2025-05-24 14:16:57] -rw-r--r-- 1 boinc boinc       530 May 24 14:16 boinc_task_state.xml
[2025-05-24 14:16:57] -rw------- 1 boinc boinc      1022 May 24 14:16 memory_monitor_summary.json
[2025-05-24 14:16:57] -rw------- 1 boinc boinc   1596740 May 24 14:16 agis_ddmendpoints.agis.ALL.json
[2025-05-24 14:16:57] -rw------- 1 boinc boinc    306727 May 24 14:16 log.44871837._011310.job.log.tgz.1
[2025-05-24 14:16:57] -rw------- 1 boinc boinc      7668 May 24 14:16 heartbeat.json
[2025-05-24 14:16:57] -rw-r--r-- 1 boinc boinc      8192 May 24 14:16 boinc_mmap_file
[2025-05-24 14:16:57] -rw-r--r-- 1 boinc boinc        28 May 24 14:16 wrapper_checkpoint.txt
[2025-05-24 14:16:57] -rw------- 1 boinc boinc      4361 May 24 14:16 pilotlog.txt
[2025-05-24 14:16:57] -rw------- 1 boinc boinc   1422713 May 24 14:16 log.44871837._011310.job.log.1
[2025-05-24 14:16:57] -rw------- 1 boinc boinc       357 May 24 14:16 output.list
[2025-05-24 14:16:57] -rw-r--r-- 1 boinc boinc       620 May 24 14:16 runtime_log
[2025-05-24 14:16:57] -rw------- 1 boinc boinc   1751040 May 24 14:16 result.tar.gz
[2025-05-24 14:16:57] -rw------- 1 boinc boinc       653 May 24 14:16 voGMDmgzyc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZ9LKDmgEvJRm.diag
[2025-05-24 14:16:57] -rw-r--r-- 1 boinc boinc      8737 May 24 14:16 runtime_log.err
[2025-05-24 14:16:57] -rw-r--r-- 1 boinc boinc     20968 May 24 14:16 stderr.txt
[2025-05-24 14:16:57] HITS file was successfully produced:
[2025-05-24 14:16:57] -rw------- 1 boinc boinc 193462542 May 24 14:16 shared/HITS.pool.root.1
[2025-05-24 14:16:57]  *** Contents of shared directory: ***
[2025-05-24 14:16:57] total 412584
[2025-05-24 14:16:57] -rw-r--r-- 2 boinc boinc 226725985 May 24 10:07 ATLAS.root_0
[2025-05-24 14:16:57] -rw-r--r-- 2 boinc boinc     15093 May 24 10:07 start_atlas.sh
[2025-05-24 14:16:57] -rw-r--r-- 2 boinc boinc    508880 May 24 10:07 input.tar.gz
[2025-05-24 14:16:57] -rw------- 1 boinc boinc 193462542 May 24 14:16 HITS.pool.root.1
[2025-05-24 14:16:57] -rw------- 1 boinc boinc   1751040 May 24 14:16 result.tar.gz
14:16:58 (604961): run_atlas exited; CPU time 29569.999500
14:16:58 (604961): called boinc_finish(0)

</stderr_txt>
]]>

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