Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:25:40 (2746068): wrapper (7.7.26015): starting
06:25:40 (2746068): wrapper: running run_atlas (--nthreads 12)
[2025-05-24 06:25:40] Arguments: --nthreads 12
[2025-05-24 06:25:40] Threads: 12
[2025-05-24 06:25:40] Checking for CVMFS
[2025-05-24 06:25:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 06:25:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 06:25:40] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 06:25:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 06:25:40] 2.11.5.0 1009298 7493 228964 146368 1 484 42282014 45568000 10566 130560 0 65066120 99.760 50908803 24134 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-24 06:25:40] CVMFS is ok
[2025-05-24 06:25:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 06:25:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 06:25:40] Further information can be found at the LHC@home message board.
[2025-05-24 06:25:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 06:25:40] Checking for apptainer binary...
[2025-05-24 06:25:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 06:25:40] Running /usr/bin/apptainer --version
[2025-05-24 06:25:40] apptainer version 1.4.0-1.el9
[2025-05-24 06:25:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 06:25:40] wns0164.triumf.lcg
[2025-05-24 06:25:40] apptainer works
[2025-05-24 06:25:40] Set ATHENA_PROC_NUMBER=12
[2025-05-24 06:25:40] Set ATHENA_CORE_NUMBER=12
[2025-05-24 06:25:41] Starting ATLAS job with PandaID=6665381147
[2025-05-24 06:25:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 06:28:50]  *** The last 200 lines of the pilot log: ***
[2025-05-24 06:28:50] 2025-05-24 13:28:33,909 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 06:28:50] 2025-05-24 13:28:33,909 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 06:28:50] 2025-05-24 13:28:33,909 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 06:28:50] 2025-05-24 13:28:33,909 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 06:28:50] 2025-05-24 13:28:33,909 | WARNING  | found no stored workdir sizes
[2025-05-24 06:28:50] 2025-05-24 13:28:33,909 | INFO     | will not add max space = 0 B to job metrics
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | WARNING  | wrong length of table data, x=[1748093173.0], y=[1152.0] (must be same and length>=4)
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | ..............................
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | . Timing measurements:
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | . get job = 0 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | . initial setup = 3 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | . payload setup = 4 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | . stage-in = 0 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | . payload execution = 15 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,911 | INFO     | . stage-out = 0 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,911 | INFO     | . log creation = 0 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,911 | INFO     | ..............................
[2025-05-24 06:28:50] 2025-05-24 13:28:33,911 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 06:28:50] 2025-05-24 13:28:33,921 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665381147/pilotlog.txt
[2025-05-24 06:28:50] 2025-05-24 13:28:33,936 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-24 06:28:50] - Log from pilotlog.txt -
[2025-05-24 06:28:50] 2025-05-24 13:28:33,908 | INFO     | extracted standard info from prmon json
[2025-05-24 06:28:50] 2025-05-24 13:28:33,909 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 06:28:50] 2025-05-24 13:28:33,909 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 06:28:50] 2025-05-24 13:28:33,909 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 06:28:50] 2025-05-24 13:28:33,909 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 06:28:50] 2025-05-24 13:28:33,909 | WARNING  | found no stored workdir sizes
[2025-05-24 06:28:50] 2025-05-24 13:28:33,909 | INFO     | will not add max space = 0 B to job metrics
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | WARNING  | wrong length of table data, x=[1748093173.0], y=[1152.0] (must be same and length>=4)
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | ..............................
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | . Timing measurements:
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | . get job = 0 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | . initial setup = 3 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | . payload setup = 4 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | . stage-in = 0 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | . payload execution = 15 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,911 | INFO     | . stage-out = 0 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,911 | INFO     | . log creation = 0 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,911 | INFO     | ..............................
[2025-05-24 06:28:50] 2025-05-24 13:28:33,911 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 06:28:50] 2025-05-24 13:28:33,921 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665381147/pilotlog.txt
[2025-05-24 06:28:50] 2025-05-24 13:28:33,936 | WARNING  | 
[2025-05-24 06:28:50] [begin log extracts]
[2025-05-24 06:28:50] - Log from pilotlog.txt -
[2025-05-24 06:28:50] 2025-05-24 13:28:33,908 | INFO     | extracted standard info from prmon json
[2025-05-24 06:28:50] 2025-05-24 13:28:33,909 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 06:28:50] 2025-05-24 13:28:33,909 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 06:28:50] 2025-05-24 13:28:33,909 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 06:28:50] 2025-05-24 13:28:33,909 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 06:28:50] 2025-05-24 13:28:33,909 | WARNING  | found no stored workdir sizes
[2025-05-24 06:28:50] 2025-05-24 13:28:33,909 | INFO     | will not add max space = 0 B to job metrics
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | WARNING  | wrong length of table data, x=[1748093173.0], y=[1152.0] (must be same and length>=4)
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | ..............................
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | . Timing measurements:
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | . get job = 0 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | . initial setup = 3 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | . payload setup = 4 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | . stage-in = 0 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,910 | INFO     | . payload execution = 15 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,911 | INFO     | . stage-out = 0 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,911 | INFO     | . log creation = 0 s
[2025-05-24 06:28:50] 2025-05-24 13:28:33,911 | INFO     | ..............................
[2025-05-24 06:28:50] 2025-05-24 13:28:33,911 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 06:28:50] 2025-05-24 13:28:33,921 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665381147/pilotlog.txt
[2025-05-24 06:28:50] [end log extracts]
[2025-05-24 06:28:50] 2025-05-24 13:28:33,937 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-24 06:28:50] 2025-05-24 13:28:33,953 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-24 06:28:50] 2025-05-24 13:28:34,306 | INFO     | 
[2025-05-24 06:28:50] 2025-05-24 13:28:34,306 | INFO     | job summary report
[2025-05-24 06:28:50] 2025-05-24 13:28:34,306 | INFO     | --------------------------------------------------
[2025-05-24 06:28:50] 2025-05-24 13:28:34,306 | INFO     | PanDA job id: 6665381147
[2025-05-24 06:28:50] 2025-05-24 13:28:34,306 | INFO     | task id: 44871837
[2025-05-24 06:28:50] 2025-05-24 13:28:34,307 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-24 06:26:19,446 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-24 06:28:50] 2025-05-24 13:28:34,307 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 06:28:50] 2025-05-24 13:28:34,307 | INFO     | pilot state: failed 
[2025-05-24 06:28:50] 2025-05-24 13:28:34,307 | INFO     | transexitcode: 65
[2025-05-24 06:28:50] 2025-05-24 13:28:34,307 | INFO     | exeerrorcode: 65
[2025-05-24 06:28:50] 2025-05-24 13:28:34,307 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-24 06:28:50] 2025-05-24 13:28:34,307 | INFO     | exitcode: 65
[2025-05-24 06:28:50] 2025-05-24 13:28:34,307 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-24 06:28:50] 2025-05-24 13:28:34,307 | INFO     | cpuconsumptiontime: 15 s
[2025-05-24 06:28:50] 2025-05-24 13:28:34,307 | INFO     | nevents: 0
[2025-05-24 06:28:50] 2025-05-24 13:28:34,307 | INFO     | neventsw: 0
[2025-05-24 06:28:50] 2025-05-24 13:28:34,307 | INFO     | pid: 2755940
[2025-05-24 06:28:50] 2025-05-24 13:28:34,307 | INFO     | pgrp: 2755940
[2025-05-24 06:28:50] 2025-05-24 13:28:34,307 | INFO     | corecount: 12
[2025-05-24 06:28:50] 2025-05-24 13:28:34,307 | INFO     | event service: False
[2025-05-24 06:28:50] 2025-05-24 13:28:34,307 | INFO     | sizes: {0: 2393736, 4: 2393942, 11: 2393970, 23: 2417246, 24: 2421509, 150: 2421623}
[2025-05-24 06:28:50] 2025-05-24 13:28:34,307 | INFO     | --------------------------------------------------
[2025-05-24 06:28:50] 2025-05-24 13:28:34,307 | INFO     | 
[2025-05-24 06:28:50] 2025-05-24 13:28:34,307 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-24 06:28:50] 2025-05-24 13:28:34,324 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 06:28:50] 2025-05-24 13:28:34,324 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 06:28:50] 2025-05-24 13:28:34,324 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 06:28:50] 2025-05-24 13:28:34,324 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 06:28:50] 2025-05-24 13:28:34,324 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 06:28:50] 2025-05-24 13:28:34,324 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 06:28:50] 2025-05-24 13:28:34,324 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 06:28:50] 2025-05-24 13:28:34,324 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 06:28:50] 2025-05-24 13:28:34,324 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 06:28:50] 2025-05-24 13:28:34,325 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 06:28:50] 2025-05-24 13:28:34,325 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 06:28:50] 2025-05-24 13:28:34,325 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 06:28:50] 2025-05-24 13:28:34,325 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 06:28:50] 2025-05-24 13:28:34,325 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 06:28:50] 2025-05-24 13:28:34,325 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 06:28:50] 2025-05-24 13:28:34,325 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 06:28:50] 2025-05-24 13:28:34,325 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 06:28:50] 2025-05-24 13:28:34,325 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 06:28:50] 2025-05-24 13:28:34,325 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 06:28:50] 2025-05-24 13:28:34,325 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 06:28:50] 2025-05-24 13:28:34,325 | INFO     | job 6665381147 has completed (purged errors)
[2025-05-24 06:28:50] 2025-05-24 13:28:34,325 | INFO     | overall cleanup function is called
[2025-05-24 06:28:50] 2025-05-24 13:28:35,338 | INFO     | --- collectZombieJob: --- 10, [2755940]
[2025-05-24 06:28:50] 2025-05-24 13:28:35,338 | INFO     | zombie collector waiting for pid 2755940
[2025-05-24 06:28:50] 2025-05-24 13:28:35,338 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 06:28:50] 2025-05-24 13:28:35,338 | INFO     | collected zombie processes
[2025-05-24 06:28:50] 2025-05-24 13:28:35,338 | INFO     | will attempt to kill all subprocesses of pid=2755940
[2025-05-24 06:28:50] 2025-05-24 13:28:36,260 | INFO     | process IDs to be killed: [2755940] (in reverse order)
[2025-05-24 06:28:50] 2025-05-24 13:28:36,377 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 06:28:50] 2025-05-24 13:28:36,377 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 06:28:50] 2025-05-24 13:28:36,386 | INFO     | did not find any defunct processes belonging to 2755940
[2025-05-24 06:28:50] 2025-05-24 13:28:36,395 | INFO     | did not find any defunct processes belonging to 2755940
[2025-05-24 06:28:50] 2025-05-24 13:28:36,396 | INFO     | ready for new job
[2025-05-24 06:28:50] 2025-05-24 13:28:36,397 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 06:28:50] 2025-05-24 13:28:36,398 | INFO     | **************************************
[2025-05-24 06:28:50] 2025-05-24 13:28:36,398 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 06:28:50] 2025-05-24 13:28:36,398 | INFO     | **************************************
[2025-05-24 06:28:50] 2025-05-24 13:28:36,398 | INFO     | 
[2025-05-24 06:28:50] 2025-05-24 13:28:36,401 | INFO     | architecture information:
[2025-05-24 06:28:50] 2025-05-24 13:28:36,415 | INFO     | executing command: cat /etc/os-release
[2025-05-24 06:28:50] 2025-05-24 13:28:36,446 | INFO     | cat /etc/os-release:
[2025-05-24 06:28:50] NAME="CentOS Linux"
[2025-05-24 06:28:50] VERSION="7 (Core)"
[2025-05-24 06:28:50] ID="centos"
[2025-05-24 06:28:50] ID_LIKE="rhel fedora"
[2025-05-24 06:28:50] VERSION_ID="7"
[2025-05-24 06:28:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 06:28:50] ANSI_COLOR="0;31"
[2025-05-24 06:28:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 06:28:50] HOME_URL="https://www.centos.org/"
[2025-05-24 06:28:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 06:28:50] 
[2025-05-24 06:28:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 06:28:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 06:28:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 06:28:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 06:28:50] 
[2025-05-24 06:28:50] 2025-05-24 13:28:36,447 | INFO     | **************************************
[2025-05-24 06:28:50] 2025-05-24 13:28:36,950 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-24 06:28:50] 2025-05-24 13:28:36,991 | INFO     | sufficient remaining disk space (2140677341184 B)
[2025-05-24 06:28:50] 2025-05-24 13:28:36,992 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 06:28:50] 2025-05-24 13:28:36,992 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 06:28:50] 2025-05-24 13:28:36,992 | INFO     | update_server=False
[2025-05-24 06:28:50] 2025-05-24 13:28:36,992 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 06:28:50] 2025-05-24 13:28:36,993 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 06:28:50] 2025-05-24 13:28:36,993 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 06:28:50] 2025-05-24 13:28:36,993 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 06:28:50] 2025-05-24 13:28:36,993 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 06:28:50] 2025-05-24 13:28:36,997 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 06:28:50] 2025-05-24 13:28:37,032 | INFO     | all payload control threads have been joined
[2025-05-24 06:28:50] 2025-05-24 13:28:37,046 | INFO     | all job control threads have been joined
[2025-05-24 06:28:50] 2025-05-24 13:28:37,496 | INFO     | all data control threads have been joined
[2025-05-24 06:28:50] 2025-05-24 13:28:37,949 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 06:28:50] 2025-05-24 13:28:37,949 | INFO     | aborting loop
[2025-05-24 06:28:50] 2025-05-24 13:28:38,000 | INFO     | [job] retrieve thread has finished
[2025-05-24 06:28:50] 2025-05-24 13:28:38,038 | INFO     | [payload] control thread has finished
[2025-05-24 06:28:50] 2025-05-24 13:28:38,060 | INFO     | [job] control thread has finished
[2025-05-24 06:28:50] 2025-05-24 13:28:38,389 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 06:28:50] 2025-05-24 13:28:38,469 | INFO     | [payload] validate_post thread has finished
[2025-05-24 06:28:50] 2025-05-24 13:28:38,502 | INFO     | [data] control thread has finished
[2025-05-24 06:28:50] 2025-05-24 13:28:38,515 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 06:28:50] 2025-05-24 13:28:38,685 | INFO     | [data] copytool_in thread has finished
[2025-05-24 06:28:50] 2025-05-24 13:28:38,955 | INFO     | [job] job monitor thread has finished
[2025-05-24 06:28:50] 2025-05-24 13:28:39,004 | INFO     | [data] copytool_out thread has finished
[2025-05-24 06:28:50] 2025-05-24 13:28:39,195 | INFO     | [job] validate thread has finished
[2025-05-24 06:28:50] 2025-05-24 13:28:39,321 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 06:28:50] 2025-05-24 13:28:39,325 | INFO     | [payload] failed_post thread has finished
[2025-05-24 06:28:50] 2025-05-24 13:28:39,363 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 06:28:50] 2025-05-24 13:28:39,485 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 06:28:50] 2025-05-24 13:28:40,327 | INFO     | [job] queue monitor thread has finished
[2025-05-24 06:28:50] 2025-05-24 13:28:40,481 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 06:28:50] 2025-05-24 13:28:44,490 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 06:28:50] 2025-05-24 13:28:45,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140128092825408)>', '<ExcThread(monitor, started 140127217096448)>']
[2025-05-24 06:28:50] 2025-05-24 13:28:46,047 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 06:28:50] 2025-05-24 13:28:46,047 | INFO     | [monitor] control thread has ended
[2025-05-24 06:28:50] 2025-05-24 13:28:50,630 | INFO     | all workflow threads have been joined
[2025-05-24 06:28:50] 2025-05-24 13:28:50,630 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 06:28:50] 2025-05-24 13:28:50,630 | INFO     | traces error code: 0
[2025-05-24 06:28:50] 2025-05-24 13:28:50,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 06:28:50] 2025-05-24 13:28:50,853 [wrapper] ==== pilot stdout END ====
[2025-05-24 06:28:50] 2025-05-24 13:28:50,855 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 06:28:50] 2025-05-24 13:28:50,857 [wrapper] pilotpid: 2749627
[2025-05-24 06:28:50] 2025-05-24 13:28:50,858 [wrapper] Pilot exit status: 0
[2025-05-24 06:28:50] 2025-05-24 13:28:50,866 [wrapper] pandaids: 6665381147
[2025-05-24 06:28:50] 2025-05-24 13:28:50,914 [wrapper] cleanup supervisor_pilot 2749633 2749628
[2025-05-24 06:28:50] 2025-05-24 13:28:50,916 [wrapper] Test setup, not cleaning
[2025-05-24 06:28:50] 2025-05-24 13:28:50,918 [wrapper] apfmon messages muted
[2025-05-24 06:28:50] 2025-05-24 13:28:50,920 [wrapper] ==== wrapper stdout END ====
[2025-05-24 06:28:50] 2025-05-24 13:28:50,922 [wrapper] ==== wrapper stderr END ====
[2025-05-24 06:28:50]  *** Error codes and diagnostics ***
[2025-05-24 06:28:50]     "exeErrorCode": 65,
[2025-05-24 06:28:50]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-24 06:28:50]     "pilotErrorCode": 1305,
[2025-05-24 06:28:50]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-24 06:28:50]  *** Listing of results directory ***
[2025-05-24 06:28:50] total 223548
[2025-05-24 06:28:50] -rw-r--r--. 1 boinc boinc    495897 May 24 03:42 pilot3.tar.gz
[2025-05-24 06:28:50] -rw-r--r--. 1 boinc boinc      5111 May 24 03:59 queuedata.json
[2025-05-24 06:28:50] -rwx------. 1 boinc boinc     37140 May 24 03:59 runpilot2-wrapper.sh
[2025-05-24 06:28:50] -rw-r--r--. 1 boinc boinc       100 May 24 06:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 06:28:50] -rwxr-xr-x. 1 boinc boinc      7986 May 24 06:25 run_atlas
[2025-05-24 06:28:50] -rw-r--r--. 1 boinc boinc       105 May 24 06:25 job.xml
[2025-05-24 06:28:50] -rw-r--r--. 2 boinc boinc 224896390 May 24 06:25 EVNT.44871834._000642.pool.root.1
[2025-05-24 06:28:50] -rw-r--r--. 1 boinc boinc      6602 May 24 06:25 init_data.xml
[2025-05-24 06:28:50] -rw-r--r--. 2 boinc boinc     15093 May 24 06:25 start_atlas.sh
[2025-05-24 06:28:50] drwxrwx--x. 2 boinc boinc      4096 May 24 06:25 shared
[2025-05-24 06:28:50] -rw-r--r--. 2 boinc boinc    508877 May 24 06:25 input.tar.gz
[2025-05-24 06:28:50] -rw-r--r--. 1 boinc boinc         0 May 24 06:25 boinc_lockfile
[2025-05-24 06:28:50] -rw-r--r--. 1 boinc boinc      2558 May 24 06:25 pandaJob.out
[2025-05-24 06:28:50] -rw-------. 1 boinc boinc    988556 May 24 06:25 agis_schedconf.cvmfs.json
[2025-05-24 06:28:50] -rw-------. 1 boinc boinc   1596740 May 24 06:25 agis_ddmendpoints.agis.ALL.json
[2025-05-24 06:28:50] drwx------. 4 boinc boinc      4096 May 24 06:25 pilot3
[2025-05-24 06:28:50] -rw-r--r--. 1 boinc boinc       522 May 24 06:26 boinc_task_state.xml
[2025-05-24 06:28:50] -rw-------. 1 boinc boinc       980 May 24 06:26 memory_monitor_summary.json
[2025-05-24 06:28:50] -rw-------. 1 boinc boinc     20343 May 24 06:26 log.44871837._016048.job.log.tgz.1
[2025-05-24 06:28:50] -rw-------. 1 boinc boinc        95 May 24 06:27 pilot_heartbeat.json
[2025-05-24 06:28:50] -rw-------. 1 boinc boinc      8358 May 24 06:28 heartbeat.json
[2025-05-24 06:28:50] -rw-r--r--. 1 boinc boinc      8192 May 24 06:28 boinc_mmap_file
[2025-05-24 06:28:50] -rw-r--r--. 1 boinc boinc        22 May 24 06:28 wrapper_checkpoint.txt
[2025-05-24 06:28:50] -rw-------. 1 boinc boinc      4475 May 24 06:28 pilotlog.txt
[2025-05-24 06:28:50] -rw-------. 1 boinc boinc     73425 May 24 06:28 log.44871837._016048.job.log.1
[2025-05-24 06:28:50] -rw-------. 1 boinc boinc       188 May 24 06:28 output.list
[2025-05-24 06:28:50] -rw-r--r--. 1 boinc boinc       620 May 24 06:28 runtime_log
[2025-05-24 06:28:50] -rw-------. 1 boinc boinc    112640 May 24 06:28 result.tar.gz
[2025-05-24 06:28:50] -rw-------. 1 boinc boinc       644 May 24 06:28 vuoKDmZm1c7n9Rq4apOajLDm4fhM0noT9bVof3QYDmucMKDmfNmIEo.diag
[2025-05-24 06:28:50] -rw-r--r--. 1 boinc boinc      8484 May 24 06:28 runtime_log.err
[2025-05-24 06:28:50] -rw-r--r--. 1 boinc boinc     21469 May 24 06:28 stderr.txt
[2025-05-24 06:28:51] No HITS result produced
[2025-05-24 06:28:51]  *** Contents of shared directory: ***
[2025-05-24 06:28:51] total 220260
[2025-05-24 06:28:51] -rw-r--r--. 2 boinc boinc 224896390 May 24 06:25 ATLAS.root_0
[2025-05-24 06:28:51] -rw-r--r--. 2 boinc boinc     15093 May 24 06:25 start_atlas.sh
[2025-05-24 06:28:51] -rw-r--r--. 2 boinc boinc    508877 May 24 06:25 input.tar.gz
[2025-05-24 06:28:51] -rw-------. 1 boinc boinc    112640 May 24 06:28 result.tar.gz
06:28:52 (2746068): run_atlas exited; CPU time 19.864444
06:28:52 (2746068): called boinc_finish(0)

</stderr_txt>
]]>

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