Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:52:40 (195425): wrapper (7.7.26015): starting
08:52:40 (195425): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 08:52:40] Arguments: --nthreads 8
[2025-05-24 08:52:40] Threads: 8
[2025-05-24 08:52:40] Checking for CVMFS
[2025-05-24 08:52:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 08:52:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 08:52:41] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 08:52:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 08:52:42] 2.12.6.0 2312179 7445 262556 146367 3 459 21969111 32935936 26899 16776704 0 30949803 99.505 40257141 26122 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 08:52:42] CVMFS is ok
[2025-05-24 08:52:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 08:52:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 08:52:42] Further information can be found at the LHC@home message board.
[2025-05-24 08:52:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 08:52:42] Checking for apptainer binary...
[2025-05-24 08:52:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 08:52:42] Running /usr/bin/apptainer --version
[2025-05-24 08:52:42] apptainer version 1.4.1-1.el9
[2025-05-24 08:52:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 08:52:43] c6-2-11-1.aglt2.org
[2025-05-24 08:52:43] apptainer works
[2025-05-24 08:52:43] Set ATHENA_PROC_NUMBER=8
[2025-05-24 08:52:43] Set ATHENA_CORE_NUMBER=8
[2025-05-24 08:52:43] Starting ATLAS job with PandaID=6665327017
[2025-05-24 08:52:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 12:59:46]  *** The last 200 lines of the pilot log: ***
[2025-05-24 12:59:46] 2025-05-24 16:59:25,412 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 12:59:46] 2025-05-24 16:59:27,957 | INFO     | monitor loop #858: job 0:6665327017 is in state 'finished'
[2025-05-24 12:59:46] 2025-05-24 16:59:27,957 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 12:59:46] 2025-05-24 16:59:29,444 | INFO     | PID=202893 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-24 12:59:46] 2025-05-24 16:59:29,444 | INFO     | .. there are 60 such processes running
[2025-05-24 12:59:46] 2025-05-24 16:59:30,474 | INFO     | monitor loop #859: job 0:6665327017 is in state 'finished'
[2025-05-24 12:59:46] 2025-05-24 16:59:30,474 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 12:59:46] 2025-05-24 16:59:31,349 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-24 12:59:46] 2025-05-24 16:59:31,349 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6665327017/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 12:59:46] 2025-05-24 16:59:31,350 | INFO     | extracted standard info from prmon json
[2025-05-24 12:59:46] 2025-05-24 16:59:31,350 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 12:59:46] 2025-05-24 16:59:31,350 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 12:59:46] 2025-05-24 16:59:31,350 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 12:59:46] 2025-05-24 16:59:31,351 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 12:59:46] 2025-05-24 16:59:31,359 | INFO     | fitting pss+swap vs Time
[2025-05-24 12:59:46] 2025-05-24 16:59:31,360 | INFO     | sum of square deviations: 4233147030.878682
[2025-05-24 12:59:46] 2025-05-24 16:59:31,365 | INFO     | sum of deviations: 58779703167.36824
[2025-05-24 12:59:46] 2025-05-24 16:59:31,365 | INFO     | mean x: 1748098649.2343097
[2025-05-24 12:59:46] 2025-05-24 16:59:31,365 | INFO     | mean y: 2083188.5648535565
[2025-05-24 12:59:46] 2025-05-24 16:59:31,365 | INFO     | -- intersect: -24271281038.980423
[2025-05-24 12:59:46] 2025-05-24 16:59:31,365 | INFO     | intersect: -24271281038.980423
[2025-05-24 12:59:46] 2025-05-24 16:59:31,366 | INFO     | chi2: 3.9229182921112917
[2025-05-24 12:59:46] 2025-05-24 16:59:31,366 | INFO     | sum of square deviations: 3973001093.0982776
[2025-05-24 12:59:46] 2025-05-24 16:59:31,368 | INFO     | sum of deviations: 73825885484.70514
[2025-05-24 12:59:46] 2025-05-24 16:59:31,368 | INFO     | mean x: 1748098496.7393162
[2025-05-24 12:59:46] 2025-05-24 16:59:31,368 | INFO     | mean y: 2091877.782051282
[2025-05-24 12:59:46] 2025-05-24 16:59:31,368 | INFO     | -- intersect: -32480889226.967827
[2025-05-24 12:59:46] 2025-05-24 16:59:31,368 | INFO     | intersect: -32480889226.967827
[2025-05-24 12:59:46] 2025-05-24 16:59:31,369 | INFO     | chi2: 3.1485842067741365
[2025-05-24 12:59:46] 2025-05-24 16:59:31,369 | INFO     | current chi2=3.1485842067741365 (change=19.73872580762861 %)
[2025-05-24 12:59:46] 2025-05-24 16:59:31,369 | INFO     | right removable region: 233
[2025-05-24 12:59:46] 2025-05-24 16:59:31,369 | INFO     | sum of square deviations: 3972966933.0982776
[2025-05-24 12:59:46] 2025-05-24 16:59:31,375 | INFO     | sum of deviations: 5607072856.444441
[2025-05-24 12:59:46] 2025-05-24 16:59:31,375 | INFO     | mean x: 1748098801.7393162
[2025-05-24 12:59:46] 2025-05-24 16:59:31,375 | INFO     | mean y: 2114238.777777778
[2025-05-24 12:59:46] 2025-05-24 16:59:31,376 | INFO     | -- intersect: -2464988434.5313616
[2025-05-24 12:59:46] 2025-05-24 16:59:31,376 | INFO     | intersect: -2464988434.5313616
[2025-05-24 12:59:46] 2025-05-24 16:59:31,376 | INFO     | chi2: 1.119710313960301
[2025-05-24 12:59:46] 2025-05-24 16:59:31,376 | INFO     | current chi2=1.119710313960301 (change=71.45721040858898 %)
[2025-05-24 12:59:46] 2025-05-24 16:59:31,376 | INFO     | sum of square deviations: 3723684789.790398
[2025-05-24 12:59:46] 2025-05-24 16:59:31,381 | INFO     | sum of deviations: -9601070337.323143
[2025-05-24 12:59:46] 2025-05-24 16:59:31,381 | INFO     | mean x: 1748098954.2401748
[2025-05-24 12:59:46] 2025-05-24 16:59:31,381 | INFO     | mean y: 2123499.07860262
[2025-05-24 12:59:46] 2025-05-24 16:59:31,382 | INFO     | -- intersect: 4509384978.96495
[2025-05-24 12:59:46] 2025-05-24 16:59:31,382 | INFO     | intersect: 4509384978.96495
[2025-05-24 12:59:46] 2025-05-24 16:59:31,382 | INFO     | chi2: 0.8858329987750321
[2025-05-24 12:59:46] 2025-05-24 16:59:31,382 | INFO     | current chi2=0.8858329987750321 (change=20.887305606578614 %)
[2025-05-24 12:59:46] 2025-05-24 16:59:31,382 | INFO     | left removable region: 20
[2025-05-24 12:59:46] 2025-05-24 16:59:31,383 | INFO     | sum of square deviations: 2996519030.6291046
[2025-05-24 12:59:46] 2025-05-24 16:59:31,384 | INFO     | sum of deviations: 9514339926.126757
[2025-05-24 12:59:46] 2025-05-24 16:59:31,384 | INFO     | mean x: 1748099076.2206573
[2025-05-24 12:59:46] 2025-05-24 16:59:31,384 | INFO     | mean y: 2130867.38028169
[2025-05-24 12:59:46] 2025-05-24 16:59:31,384 | INFO     | -- intersect: -5548312385.50962
[2025-05-24 12:59:46] 2025-05-24 16:59:31,384 | INFO     | intersect: -5548312385.50962
[2025-05-24 12:59:46] 2025-05-24 16:59:31,389 | INFO     | chi2: 0.06534294579302624
[2025-05-24 12:59:46] 2025-05-24 16:59:31,389 | INFO     | -- intersect: -5548312385.50962
[2025-05-24 12:59:46] 2025-05-24 16:59:31,389 | INFO     | current memory leak: 3.18 B/s (using 213 data points, chi2=0.07)
[2025-05-24 12:59:46] 2025-05-24 16:59:31,394 | INFO     | ..............................
[2025-05-24 12:59:46] 2025-05-24 16:59:31,394 | INFO     | . Timing measurements:
[2025-05-24 12:59:46] 2025-05-24 16:59:31,394 | INFO     | . get job = 0 s
[2025-05-24 12:59:46] 2025-05-24 16:59:31,394 | INFO     | . initial setup = 5 s
[2025-05-24 12:59:46] 2025-05-24 16:59:31,394 | INFO     | . payload setup = 51 s
[2025-05-24 12:59:46] 2025-05-24 16:59:31,394 | INFO     | . stage-in = 0 s
[2025-05-24 12:59:46] 2025-05-24 16:59:31,394 | INFO     | . payload execution = 14576 s
[2025-05-24 12:59:46] 2025-05-24 16:59:31,394 | INFO     | . stage-out = 17 s
[2025-05-24 12:59:46] 2025-05-24 16:59:31,394 | INFO     | . log creation = 0 s
[2025-05-24 12:59:46] 2025-05-24 16:59:31,394 | INFO     | ..............................
[2025-05-24 12:59:46] 2025-05-24 16:59:31,543 | INFO     | 
[2025-05-24 12:59:46] 2025-05-24 16:59:31,543 | INFO     | job summary report
[2025-05-24 12:59:46] 2025-05-24 16:59:31,543 | INFO     | --------------------------------------------------
[2025-05-24 12:59:46] 2025-05-24 16:59:31,544 | INFO     | PanDA job id: 6665327017
[2025-05-24 12:59:46] 2025-05-24 16:59:31,544 | INFO     | task id: 44871837
[2025-05-24 12:59:46] 2025-05-24 16:59:31,544 | INFO     | errors: (none)
[2025-05-24 12:59:46] 2025-05-24 16:59:31,544 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 12:59:46] 2025-05-24 16:59:31,544 | INFO     | pilot state: finished 
[2025-05-24 12:59:46] 2025-05-24 16:59:31,544 | INFO     | transexitcode: 0
[2025-05-24 12:59:46] 2025-05-24 16:59:31,544 | INFO     | exeerrorcode: 0
[2025-05-24 12:59:46] 2025-05-24 16:59:31,544 | INFO     | exeerrordiag: 
[2025-05-24 12:59:46] 2025-05-24 16:59:31,544 | INFO     | exitcode: 0
[2025-05-24 12:59:46] 2025-05-24 16:59:31,544 | INFO     | exitmsg: OK
[2025-05-24 12:59:46] 2025-05-24 16:59:31,544 | INFO     | cpuconsumptiontime: 53515 s
[2025-05-24 12:59:46] 2025-05-24 16:59:31,544 | INFO     | nevents: 400
[2025-05-24 12:59:46] 2025-05-24 16:59:31,544 | INFO     | neventsw: 0
[2025-05-24 12:59:46] 2025-05-24 16:59:31,544 | INFO     | pid: 213929
[2025-05-24 12:59:46] 2025-05-24 16:59:31,545 | INFO     | pgrp: 213929
[2025-05-24 12:59:46] 2025-05-24 16:59:31,545 | INFO     | corecount: 8
[2025-05-24 12:59:46] 2025-05-24 16:59:31,545 | INFO     | event service: False
[2025-05-24 12:59:46] 2025-05-24 16:59:31,546 | INFO     | sizes: {0: 2393506, 1: 2393562, 2: 2393789, 3: 2393789, 14: 2393817, 25: 2393845, 37: 2394235, 48: 2394235, 14630: 2424266, 14648: 2433433, 14664: 2433377}
[2025-05-24 12:59:46] 2025-05-24 16:59:31,546 | INFO     | --------------------------------------------------
[2025-05-24 12:59:46] 2025-05-24 16:59:31,547 | INFO     | 
[2025-05-24 12:59:46] 2025-05-24 16:59:31,547 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-05-24 12:59:46] 2025-05-24 16:59:31,572 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 12:59:46] 2025-05-24 16:59:31,572 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 12:59:46] 2025-05-24 16:59:31,572 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 12:59:46] 2025-05-24 16:59:31,572 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 12:59:46] 2025-05-24 16:59:31,573 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 12:59:46] 2025-05-24 16:59:31,573 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 12:59:46] 2025-05-24 16:59:31,573 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 12:59:46] 2025-05-24 16:59:31,573 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 12:59:46] 2025-05-24 16:59:31,573 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 12:59:46] 2025-05-24 16:59:31,573 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 12:59:46] 2025-05-24 16:59:31,573 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 12:59:46] 2025-05-24 16:59:31,573 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 12:59:46] 2025-05-24 16:59:31,573 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 12:59:46] 2025-05-24 16:59:31,573 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 12:59:46] 2025-05-24 16:59:31,573 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 12:59:46] 2025-05-24 16:59:31,573 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 12:59:46] 2025-05-24 16:59:31,573 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 12:59:46] 2025-05-24 16:59:31,573 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 12:59:46] 2025-05-24 16:59:31,574 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 12:59:46] 2025-05-24 16:59:31,574 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 12:59:46] 2025-05-24 16:59:31,574 | INFO     | job 6665327017 has completed (purged errors)
[2025-05-24 12:59:46] 2025-05-24 16:59:31,574 | INFO     | overall cleanup function is called
[2025-05-24 12:59:46] 2025-05-24 16:59:32,587 | INFO     | --- collectZombieJob: --- 10, [213929]
[2025-05-24 12:59:46] 2025-05-24 16:59:32,587 | INFO     | zombie collector waiting for pid 213929
[2025-05-24 12:59:46] 2025-05-24 16:59:32,587 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 12:59:46] 2025-05-24 16:59:32,587 | INFO     | collected zombie processes
[2025-05-24 12:59:46] 2025-05-24 16:59:32,587 | INFO     | will attempt to kill all subprocesses of pid=213929
[2025-05-24 12:59:46] 2025-05-24 16:59:33,381 | INFO     | process IDs to be killed: [213929] (in reverse order)
[2025-05-24 12:59:46] 2025-05-24 16:59:33,607 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 12:59:46] 2025-05-24 16:59:33,608 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 12:59:46] 2025-05-24 16:59:33,660 | INFO     | did not find any defunct processes belonging to 213929
[2025-05-24 12:59:46] 2025-05-24 16:59:33,681 | INFO     | did not find any defunct processes belonging to 213929
[2025-05-24 12:59:46] 2025-05-24 16:59:33,681 | INFO     | ready for new job
[2025-05-24 12:59:46] 2025-05-24 16:59:33,682 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 12:59:46] 2025-05-24 16:59:33,683 | INFO     | **************************************
[2025-05-24 12:59:46] 2025-05-24 16:59:33,683 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 12:59:46] 2025-05-24 16:59:33,684 | INFO     | **************************************
[2025-05-24 12:59:46] 2025-05-24 16:59:33,684 | INFO     | 
[2025-05-24 12:59:46] 2025-05-24 16:59:33,706 | INFO     | architecture information:
[2025-05-24 12:59:46] 2025-05-24 16:59:33,710 | INFO     | executing command: cat /etc/os-release
[2025-05-24 12:59:46] 2025-05-24 16:59:33,768 | INFO     | cat /etc/os-release:
[2025-05-24 12:59:46] NAME="CentOS Linux"
[2025-05-24 12:59:46] VERSION="7 (Core)"
[2025-05-24 12:59:46] ID="centos"
[2025-05-24 12:59:46] ID_LIKE="rhel fedora"
[2025-05-24 12:59:46] VERSION_ID="7"
[2025-05-24 12:59:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 12:59:46] ANSI_COLOR="0;31"
[2025-05-24 12:59:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 12:59:46] HOME_URL="https://www.centos.org/"
[2025-05-24 12:59:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 12:59:46] 
[2025-05-24 12:59:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 12:59:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 12:59:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 12:59:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 12:59:46] 
[2025-05-24 12:59:46] 2025-05-24 16:59:33,769 | INFO     | **************************************
[2025-05-24 12:59:46] 2025-05-24 16:59:34,272 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-05-24 12:59:46] 2025-05-24 16:59:34,307 | INFO     | sufficient remaining disk space (93554999296 B)
[2025-05-24 12:59:46] 2025-05-24 16:59:34,308 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 12:59:46] 2025-05-24 16:59:34,308 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 12:59:46] 2025-05-24 16:59:34,308 | INFO     | update_server=False
[2025-05-24 12:59:46] 2025-05-24 16:59:34,308 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 12:59:46] 2025-05-24 16:59:34,308 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 12:59:46] 2025-05-24 16:59:34,309 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 12:59:46] 2025-05-24 16:59:34,309 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 12:59:46] 2025-05-24 16:59:34,309 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 12:59:46] 2025-05-24 16:59:34,309 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 12:59:46] 2025-05-24 16:59:34,309 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 12:59:46] 2025-05-24 16:59:34,309 | INFO     | aborting loop
[2025-05-24 12:59:46] 2025-05-24 16:59:34,797 | INFO     | all data control threads have been joined
[2025-05-24 12:59:46] 2025-05-24 16:59:35,206 | INFO     | all payload control threads have been joined
[2025-05-24 12:59:46] 2025-05-24 16:59:35,321 | INFO     | [job] retrieve thread has finished
[2025-05-24 12:59:46] 2025-05-24 16:59:35,321 | INFO     | [job] job monitor thread has finished
[2025-05-24 12:59:46] 2025-05-24 16:59:35,481 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 12:59:46] 2025-05-24 16:59:35,613 | INFO     | all job control threads have been joined
[2025-05-24 12:59:46] 2025-05-24 16:59:35,766 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 12:59:46] 2025-05-24 16:59:35,803 | INFO     | [data] control thread has finished
[2025-05-24 12:59:46] 2025-05-24 16:59:35,890 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 12:59:46] 2025-05-24 16:59:36,224 | INFO     | [payload] control thread has finished
[2025-05-24 12:59:46] 2025-05-24 16:59:36,252 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 12:59:46] 2025-05-24 16:59:36,328 | INFO     | [data] copytool_out thread has finished
[2025-05-24 12:59:46] 2025-05-24 16:59:36,432 | INFO     | [payload] validate_post thread has finished
[2025-05-24 12:59:46] 2025-05-24 16:59:36,459 | INFO     | [job] validate thread has finished
[2025-05-24 12:59:46] 2025-05-24 16:59:36,481 | INFO     | [data] copytool_in thread has finished
[2025-05-24 12:59:46] 2025-05-24 16:59:36,537 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 12:59:46] 2025-05-24 16:59:36,560 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 12:59:46] 2025-05-24 16:59:36,619 | INFO     | [job] control thread has finished
[2025-05-24 12:59:46] 2025-05-24 16:59:36,732 | INFO     | [payload] failed_post thread has finished
[2025-05-24 12:59:46] 2025-05-24 16:59:37,566 | INFO     | [job] queue monitor thread has finished
[2025-05-24 12:59:46] 2025-05-24 16:59:39,775 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 12:59:46] 2025-05-24 16:59:40,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140006923872064)>', '<ExcThread(monitor, started 140006135953152)>']
[2025-05-24 12:59:46] 2025-05-24 16:59:41,367 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 12:59:46] 2025-05-24 16:59:41,367 | INFO     | [monitor] control thread has ended
[2025-05-24 12:59:46] 2025-05-24 16:59:45,942 | INFO     | all workflow threads have been joined
[2025-05-24 12:59:46] 2025-05-24 16:59:45,942 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 12:59:46] 2025-05-24 16:59:45,942 | INFO     | traces error code: 0
[2025-05-24 12:59:46] 2025-05-24 16:59:45,942 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 12:59:46] 2025-05-24 16:59:46,361 [wrapper] ==== pilot stdout END ====
[2025-05-24 12:59:46] 2025-05-24 16:59:46,376 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 12:59:46] 2025-05-24 16:59:46,379 [wrapper] pilotpid: 202893
[2025-05-24 12:59:46] 2025-05-24 16:59:46,381 [wrapper] Pilot exit status: 0
[2025-05-24 12:59:46] 2025-05-24 16:59:46,393 [wrapper] pandaids: 6665327017
[2025-05-24 12:59:46] 2025-05-24 16:59:46,498 [wrapper] cleanup supervisor_pilot 1771802 202894
[2025-05-24 12:59:46] 2025-05-24 16:59:46,500 [wrapper] Test setup, not cleaning
[2025-05-24 12:59:46] 2025-05-24 16:59:46,502 [wrapper] apfmon messages muted
[2025-05-24 12:59:46] 2025-05-24 16:59:46,505 [wrapper] ==== wrapper stdout END ====
[2025-05-24 12:59:46] 2025-05-24 16:59:46,506 [wrapper] ==== wrapper stderr END ====
[2025-05-24 12:59:46]  *** Error codes and diagnostics ***
[2025-05-24 12:59:46]     "exeErrorCode": 0,
[2025-05-24 12:59:46]     "exeErrorDiag": "",
[2025-05-24 12:59:46]     "pilotErrorCode": 0,
[2025-05-24 12:59:46]     "pilotErrorDiag": "",
[2025-05-24 12:59:46]  *** Listing of results directory ***
[2025-05-24 12:59:46] total 421696
[2025-05-24 12:59:46] -rw-r--r--. 1 boincer umatlas    495897 May 24 04:48 pilot3.tar.gz
[2025-05-24 12:59:46] -rw-r--r--. 1 boincer umatlas      5111 May 24 04:57 queuedata.json
[2025-05-24 12:59:46] -rwx------. 1 boincer umatlas     37140 May 24 04:59 runpilot2-wrapper.sh
[2025-05-24 12:59:46] -rw-r--r--. 1 boincer umatlas       100 May 24 08:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 12:59:46] -rwxr-xr-x. 1 boincer umatlas      7986 May 24 08:52 run_atlas
[2025-05-24 12:59:46] -rw-r--r--. 1 boincer umatlas       105 May 24 08:52 job.xml
[2025-05-24 12:59:46] -rw-r--r--. 2 boincer umatlas 223512641 May 24 08:52 EVNT.44871834._000538.pool.root.1
[2025-05-24 12:59:46] -rw-r--r--. 2 boincer umatlas     15093 May 24 08:52 start_atlas.sh
[2025-05-24 12:59:46] drwxrwx--x. 2 boincer umatlas      4096 May 24 08:52 shared
[2025-05-24 12:59:46] -rw-r--r--. 2 boincer umatlas    508881 May 24 08:52 input.tar.gz
[2025-05-24 12:59:46] -rw-r--r--. 1 boincer umatlas         0 May 24 08:52 boinc_lockfile
[2025-05-24 12:59:46] -rw-r--r--. 1 boincer umatlas      2555 May 24 08:52 pandaJob.out
[2025-05-24 12:59:46] -rw-------. 1 boincer umatlas    988556 May 24 08:53 agis_schedconf.cvmfs.json
[2025-05-24 12:59:46] drwx------. 4 boincer umatlas      4096 May 24 08:53 pilot3
[2025-05-24 12:59:46] -rw-------. 1 boincer umatlas 201419552 May 24 12:58 HITS.44871837._013427.pool.root.1
[2025-05-24 12:59:46] -rw-r--r--. 1 boincer umatlas      6856 May 24 12:58 init_data.xml
[2025-05-24 12:59:46] -rw-r--r--. 1 boincer umatlas       531 May 24 12:58 boinc_task_state.xml
[2025-05-24 12:59:46] -rw-------. 1 boincer umatlas        95 May 24 12:58 pilot_heartbeat.json
[2025-05-24 12:59:46] -rw-------. 1 boincer umatlas      1044 May 24 12:58 memory_monitor_summary.json
[2025-05-24 12:59:46] -rw-------. 1 boincer umatlas   1596740 May 24 12:59 agis_ddmendpoints.agis.ALL.json
[2025-05-24 12:59:46] -rw-------. 1 boincer umatlas    378909 May 24 12:59 log.44871837._013427.job.log.tgz.1
[2025-05-24 12:59:46] -rw-------. 1 boincer umatlas      7726 May 24 12:59 heartbeat.json
[2025-05-24 12:59:46] -rw-r--r--. 1 boincer umatlas      8192 May 24 12:59 boinc_mmap_file
[2025-05-24 12:59:46] -rw-r--r--. 1 boincer umatlas        28 May 24 12:59 wrapper_checkpoint.txt
[2025-05-24 12:59:46] -rw-------. 1 boincer umatlas      4476 May 24 12:59 pilotlog.txt
[2025-05-24 12:59:46] -rw-------. 1 boincer umatlas   1143371 May 24 12:59 log.44871837._013427.job.log.1
[2025-05-24 12:59:46] -rw-------. 1 boincer umatlas       357 May 24 12:59 output.list
[2025-05-24 12:59:46] -rw-r--r--. 1 boincer umatlas       620 May 24 12:59 runtime_log
[2025-05-24 12:59:46] -rw-------. 1 boincer umatlas   1546240 May 24 12:59 result.tar.gz
[2025-05-24 12:59:46] -rw-r--r--. 1 boincer umatlas      8665 May 24 12:59 runtime_log.err
[2025-05-24 12:59:46] -rw-------. 1 boincer umatlas       657 May 24 12:59 gxsMDmFuzc7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8mQKDmNq48Fm.diag
[2025-05-24 12:59:46] -rw-r--r--. 1 boincer umatlas     21283 May 24 12:59 stderr.txt
[2025-05-24 12:59:47] HITS file was successfully produced:
[2025-05-24 12:59:47] -rw-------. 1 boincer umatlas 201419552 May 24 12:58 shared/HITS.pool.root.1
[2025-05-24 12:59:47]  *** Contents of shared directory: ***
[2025-05-24 12:59:47] total 417012
[2025-05-24 12:59:47] -rw-r--r--. 2 boincer umatlas 223512641 May 24 08:52 ATLAS.root_0
[2025-05-24 12:59:47] -rw-r--r--. 2 boincer umatlas     15093 May 24 08:52 start_atlas.sh
[2025-05-24 12:59:47] -rw-r--r--. 2 boincer umatlas    508881 May 24 08:52 input.tar.gz
[2025-05-24 12:59:47] -rw-------. 1 boincer umatlas 201419552 May 24 12:58 HITS.pool.root.1
[2025-05-24 12:59:47] -rw-------. 1 boincer umatlas   1546240 May 24 12:59 result.tar.gz
12:59:49 (195425): run_atlas exited; CPU time 54253.488061
12:59:49 (195425): called boinc_finish(0)

</stderr_txt>
]]>

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