Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-24 13:26:10 (2683253): Detected: vboxwrapper 26206
2025-05-24 13:26:10 (2683253): Detected: BOINC client v7.24.1
2025-05-24 13:26:10 (2683253): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-05-24 13:26:10 (2683253): Successfully copied 'init_data.xml' to the shared directory.
2025-05-24 13:26:10 (2683253): Create VM. (boinc_17be2e0ed00dfc1c, slot#7)
2025-05-24 13:26:11 (2683253): Setting Memory Size for VM. (4800MB)
2025-05-24 13:26:11 (2683253): Setting CPU Count for VM. (8)
2025-05-24 13:26:11 (2683253): Setting Chipset Options for VM.
2025-05-24 13:26:11 (2683253): Setting Graphics Controller Options for VM.
2025-05-24 13:26:11 (2683253): Setting Boot Options for VM.
2025-05-24 13:26:11 (2683253): Setting Network Configuration for NAT.
2025-05-24 13:26:11 (2683253): Enabling VM Network Access.
2025-05-24 13:26:11 (2683253): Disabling USB Support for VM.
2025-05-24 13:26:11 (2683253): Disabling COM Port Support for VM.
2025-05-24 13:26:11 (2683253): Disabling LPT Port Support for VM.
2025-05-24 13:26:11 (2683253): Disabling Audio Support for VM.
2025-05-24 13:26:11 (2683253): Disabling Clipboard Support for VM.
2025-05-24 13:26:11 (2683253): Disabling Drag and Drop Support for VM.
2025-05-24 13:26:11 (2683253): Adding storage controller(s) to VM.
2025-05-24 13:26:11 (2683253): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-24 13:26:12 (2683253): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-24 13:26:12 (2683253): forwarding host port 47645 to guest port 80
2025-05-24 13:26:12 (2683253): Enabling remote desktop for VM.
2025-05-24 13:26:12 (2683253): Required extension pack not installed, remote desktop not enabled.
2025-05-24 13:26:12 (2683253): Enabling shared directory for VM.
2025-05-24 13:26:12 (2683253): Starting VM using VBoxManage interface. (boinc_17be2e0ed00dfc1c, slot#7)
2025-05-24 13:26:13 (2683253): Successfully started VM. (PID = '2683641')
2025-05-24 13:26:13 (2683253): Reporting VM Process ID to BOINC.
2025-05-24 13:26:13 (2683253): Guest Log: BIOS: VirtualBox 7.0.16
2025-05-24 13:26:13 (2683253): Guest Log: CPUID EDX: 0x178bfbff
2025-05-24 13:26:13 (2683253): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-24 13:26:13 (2683253): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-24 13:26:13 (2683253): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-24 13:26:13 (2683253): Detected: Web Application Enabled (http://localhost:47645)
2025-05-24 13:26:13 (2683253): Preference change detected
2025-05-24 13:26:13 (2683253): Setting CPU throttle for VM. (75%)
2025-05-24 13:26:13 (2683253): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-24 13:26:15 (2683253): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-24 13:26:15 (2683253): Guest Log: BIOS: Booting from Hard Disk...
2025-05-24 13:26:18 (2683253): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-24 13:26:18 (2683253): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-24 13:26:18 (2683253): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-24 13:26:28 (2683253): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-24 13:26:28 (2683253): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-24 13:26:34 (2683253): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-24 13:26:34 (2683253): Guest Log: 00:00:00.000154 main     Log opened 2025-05-24T16:26:31.908340000Z
2025-05-24 13:26:34 (2683253): Guest Log: 00:00:00.000235 main     OS Product: Linux
2025-05-24 13:26:34 (2683253): Guest Log: 00:00:00.000257 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-24 13:26:34 (2683253): Guest Log: 00:00:00.000273 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-24 13:26:34 (2683253): Guest Log: 00:00:00.000289 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-24 13:26:34 (2683253): Guest Log: 00:00:00.000289 main     Process ID: 1354
2025-05-24 13:26:34 (2683253): Guest Log: 00:00:00.000290 main     Package type: LINUX_64BITS_GENERIC
2025-05-24 13:26:34 (2683253): Guest Log: 00:00:00.001280 main     5.2.32 r132073 started. Verbose level = 0
2025-05-24 13:26:34 (2683253): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-24 13:26:34 (2683253): Guest Log: [INFO] Mounting shared directory
2025-05-24 13:26:34 (2683253): Guest Log: [INFO] Checking for init_data.xml
2025-05-24 13:26:54 (2683253): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-24 13:26:54 (2683253): Guest Log: [INFO] Detected branch: prod
2025-05-24 13:26:54 (2683253): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-24 13:26:54 (2683253): Guest Log: Copying input files
2025-05-24 13:26:55 (2683253): Guest Log: Copied input files into RunAtlas.
2025-05-24 13:26:55 (2683253): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-24 13:26:55 (2683253): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-24 13:26:55 (2683253): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-24 13:26:55 (2683253): Guest Log: Further information can be found at the LHC@home message board.
2025-05-24 13:27:09 (2683253): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-24 13:27:10 (2683253): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-24 13:27:10 (2683253): Guest Log: 2.6.3.0 1636 0 32172 146373 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-24 13:27:11 (2683253): Guest Log: copied the webapp to /var/www
2025-05-24 13:27:11 (2683253): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-24 13:27:11 (2683253): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-24 13:27:12 (2683253): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-24 13:27:12 (2683253): Guest Log:  *** Starting ATLAS job. (PandaID=6665289323 taskID=44871837) ***
2025-05-24 13:31:24 (2683253): VM state change detected. (old = 'running', new = 'paused')
2025-05-24 13:31:44 (2683253): VM state change detected. (old = 'paused', new = 'running')
2025-05-24 14:24:42 (2683253): VM state change detected. (old = 'running', new = 'paused')
2025-05-24 14:25:03 (2683253): VM state change detected. (old = 'paused', new = 'running')
2025-05-24 15:05:57 (2683253): Status Report: Elapsed Time: '6000.000000'
2025-05-24 15:05:57 (2683253): Status Report: CPU Time: '27161.830000'
2025-05-24 15:40:41 (2683253): Guest Log:  *** Job finished ***
2025-05-24 15:40:41 (2683253): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-24 15:40:41 (2683253): Guest Log: 2025-05-24 18:39:50,834 | INFO     | [payload] failed_post thread has finished
2025-05-24 15:40:41 (2683253): Guest Log: 2025-05-24 18:39:50,842 | INFO     | [job] control thread has finished
2025-05-24 15:40:41 (2683253): Guest Log: 2025-05-24 18:39:53,182 | INFO     | [data] queue_monitor thread has finished
2025-05-24 15:40:41 (2683253): Guest Log: 2025-05-24 18:39:54,524 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140084040165184)>', '<ExcThread(monitor, started 140083302754048)>']
2025-05-24 15:40:41 (2683253): Guest Log: 2025-05-24 18:39:54,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-24 15:40:41 (2683253): Guest Log: 2025-05-24 18:39:54,771 | INFO     | [monitor] control thread has ended
2025-05-24 15:40:41 (2683253): Guest Log: 2025-05-24 18:39:59,539 | INFO     | all workflow threads have been joined
2025-05-24 15:40:41 (2683253): Guest Log: 2025-05-24 18:39:59,539 | INFO     | end of generic workflow (traces error code: 0)
2025-05-24 15:40:41 (2683253): Guest Log: 2025-05-24 18:39:59,539 | INFO     | traces error code: 0
2025-05-24 15:40:41 (2683253): Guest Log: 2025-05-24 18:39:59,539 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-24 15:40:41 (2683253): Guest Log: 2025-05-24 18:39:59,607 [wrapper] ==== pilot stdout END ====
2025-05-24 15:40:41 (2683253): Guest Log: 2025-05-24 18:39:59,612 [wrapper] ==== wrapper stdout RESUME ====
2025-05-24 15:40:41 (2683253): Guest Log: 2025-05-24 18:39:59,616 [wrapper] pilotpid: 6019
2025-05-24 15:40:41 (2683253): Guest Log: 2025-05-24 18:39:59,620 [wrapper] Pilot exit status: 0
2025-05-24 15:40:41 (2683253): Guest Log: 2025-05-24 18:40:02,122 [wrapper] pandaids: 6665289323
2025-05-24 15:40:41 (2683253): Guest Log: 2025-05-24 18:40:02,157 [wrapper] cleanup supervisor_pilot  5277 6020
2025-05-24 15:40:41 (2683253): Guest Log: 2025-05-24 18:40:02,161 [wrapper] Test setup, not cleaning
2025-05-24 15:40:41 (2683253): Guest Log: 2025-05-24 18:40:02,167 [wrapper] apfmon messages muted
2025-05-24 15:40:41 (2683253): Guest Log: 2025-05-24 18:40:02,170 [wrapper] ==== wrapper stdout END ====
2025-05-24 15:40:41 (2683253): Guest Log: 2025-05-24 18:40:02,175 [wrapper] ==== wrapper stderr END ====
2025-05-24 15:40:41 (2683253): Guest Log:  *** Error codes and diagnostics ***
2025-05-24 15:40:41 (2683253): Guest Log:     "exeErrorCode": 0,
2025-05-24 15:40:41 (2683253): Guest Log:     "exeErrorDiag": "",
2025-05-24 15:40:41 (2683253): Guest Log:     "pilotErrorCode": 0,
2025-05-24 15:40:41 (2683253): Guest Log:     "pilotErrorDiag": "",
2025-05-24 15:40:41 (2683253): Guest Log:  *** Listing of results directory ***
2025-05-24 15:40:41 (2683253): Guest Log: total 200892
2025-05-24 15:40:41 (2683253): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 24 08:32 pilot3.tar.gz
2025-05-24 15:40:41 (2683253): Guest Log: -rwx------. 1 atlas atlas     37140 May 24 08:46 runpilot2-wrapper.sh
2025-05-24 15:40:41 (2683253): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 24 08:46 queuedata.json
2025-05-24 15:40:41 (2683253): Guest Log: -rw-r--r--. 1 atlas atlas      6515 May 24 16:26 init_data.xml
2025-05-24 15:40:41 (2683253): Guest Log: -rw-r--r--. 1 atlas atlas     15093 May 24 16:26 start_atlas.sh
2025-05-24 15:40:41 (2683253): Guest Log: -rw-r--r--. 1 atlas atlas    508874 May 24 16:26 input.tar.gz
2025-05-24 15:40:41 (2683253): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 24 16:26 EVNT.44871834._000514.pool.root.1 -> /data/./ATLAS.root_0
2025-05-24 15:40:41 (2683253): Guest Log: -rw-r--r--. 1 atlas atlas      2558 May 24 16:27 pandaJob.out
2025-05-24 15:40:41 (2683253): Guest Log: -rw-------. 1 atlas atlas    988572 May 24 16:31 agis_schedconf.cvmfs.json
2025-05-24 15:40:41 (2683253): Guest Log: -rw-------. 1 atlas atlas   1596740 May 24 16:31 agis_ddmendpoints.agis.ALL.json
2025-05-24 15:40:41 (2683253): Guest Log: drwx------. 4 atlas atlas      4096 May 24 16:32 pilot3
2025-05-24 15:40:41 (2683253): Guest Log: -rw-------. 1 atlas atlas 200083146 May 24 18:38 HITS.44871837._012837.pool.root.1
2025-05-24 15:40:41 (2683253): Guest Log: -rw-------. 1 atlas atlas        95 May 24 18:38 pilot_heartbeat.json
2025-05-24 15:40:41 (2683253): Guest Log: -rw-------. 1 atlas atlas      1033 May 24 18:39 memory_monitor_summary.json
2025-05-24 15:40:41 (2683253): Guest Log: -rw-------. 1 atlas atlas    320872 May 24 18:39 log.44871837._012837.job.log.tgz.1
2025-05-24 15:40:41 (2683253): Guest Log: -rw-------. 1 atlas atlas      7737 May 24 18:39 heartbeat.json
2025-05-24 15:40:41 (2683253): Guest Log: -rw-------. 1 atlas atlas      4599 May 24 18:39 pilotlog.txt
2025-05-24 15:40:41 (2683253): Guest Log: -rw-------. 1 atlas atlas    615128 May 24 18:40 log.44871837._012837.job.log.1
2025-05-24 15:40:41 (2683253): Guest Log: -rw-------. 1 atlas atlas       357 May 24 18:40 output.list
2025-05-24 15:40:41 (2683253): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 24 18:40 runtime_log
2025-05-24 15:40:41 (2683253): Guest Log: -rw-------. 1 atlas atlas    952320 May 24 18:40 result.tar.gz
2025-05-24 15:40:41 (2683253): Guest Log: -rw-------. 1 atlas atlas       665 May 24 18:40 VAYNDmKhzc7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSiQKDmuTb8am.diag
2025-05-24 15:40:41 (2683253): Guest Log: -rw-r--r--. 1 atlas atlas      8628 May 24 18:40 runtime_log.err
2025-05-24 15:40:41 (2683253): Guest Log: Looking for outputfile HITS.44871837._012837.pool.root.1
2025-05-24 15:40:41 (2683253): Guest Log: HITS file was successfully produced
2025-05-24 15:40:41 (2683253): Guest Log: -rw-------. 1 atlas atlas 200083146 May 24 18:38 /home/atlas/RunAtlas/HITS.44871837._012837.pool.root.1
2025-05-24 15:40:41 (2683253): Guest Log: Successfully finished the ATLAS job!
2025-05-24 15:40:41 (2683253): Guest Log: Copying the results back to the shared directory!
2025-05-24 15:40:41 (2683253): Guest Log:  *** Contents of shared directory: ***
2025-05-24 15:40:41 (2683253): Guest Log: total 218416
2025-05-24 15:40:41 (2683253): Guest Log: -rw-r--r--. 1 root root 222160780 May 24 16:26 ATLAS.root_0
2025-05-24 15:40:41 (2683253): Guest Log: -rw-r--r--. 1 root root      6515 May 24 16:26 init_data.xml
2025-05-24 15:40:41 (2683253): Guest Log: -rw-r--r--. 1 root root    508874 May 24 16:26 input.tar.gz
2025-05-24 15:40:41 (2683253): Guest Log: -rw-r--r--. 1 root root    952320 May 24  2025 result.tar.gz
2025-05-24 15:40:41 (2683253): Guest Log: -rw-r--r--. 1 root root     15093 May 24 16:26 start_atlas.sh
2025-05-24 15:40:41 (2683253): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-24 15:40:41 (2683253): VM Completion File Detected.
2025-05-24 15:40:42 (2683253): Powering off VM.
2025-05-24 15:40:42 (2683253): Successfully stopped VM.
2025-05-24 15:40:42 (2683253): Deregistering VM. (boinc_17be2e0ed00dfc1c, slot#7)
2025-05-24 15:40:42 (2683253): Removing network bandwidth throttle group from VM.
2025-05-24 15:40:42 (2683253): Removing VM from VirtualBox.
15:40:47 (2683253): called boinc_finish(0)

</stderr_txt>
]]>

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