Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:59:52 (324065): wrapper (7.7.26015): starting
07:59:52 (324065): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 07:59:52] Arguments: --nthreads 8
[2025-05-24 07:59:52] Threads: 8
[2025-05-24 07:59:52] Checking for CVMFS
[2025-05-24 07:59:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 07:59:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 07:59:53] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 07:59:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 07:59:54] 2.12.6.0 5013 21443 540144 146366 3 380 31157312 32935937 37742 16776704 0 270037854 99.620 259665410 36565 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 07:59:54] CVMFS is ok
[2025-05-24 07:59:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 07:59:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 07:59:54] Further information can be found at the LHC@home message board.
[2025-05-24 07:59:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 07:59:54] Checking for apptainer binary...
[2025-05-24 07:59:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 07:59:54] Running /usr/bin/apptainer --version
[2025-05-24 07:59:54] apptainer version 1.4.1-1.el9
[2025-05-24 07:59:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 07:59:55] c7-9-15.aglt2.org
[2025-05-24 07:59:55] apptainer works
[2025-05-24 07:59:55] Set ATHENA_PROC_NUMBER=8
[2025-05-24 07:59:55] Set ATHENA_CORE_NUMBER=8
[2025-05-24 07:59:55] Starting ATLAS job with PandaID=6665275157
[2025-05-24 07:59:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 10:14:41]  *** The last 200 lines of the pilot log: ***
[2025-05-24 10:14:41] 2025-05-24 14:14:07,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 10:14:41] 2025-05-24 14:14:10,419 | INFO     | monitor loop #504: job 0:6665275157 is in state 'finished'
[2025-05-24 10:14:41] 2025-05-24 14:14:10,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 10:14:41] 2025-05-24 14:14:12,926 | INFO     | monitor loop #505: job 0:6665275157 is in state 'finished'
[2025-05-24 10:14:41] 2025-05-24 14:14:12,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 10:14:41] 2025-05-24 14:14:15,433 | INFO     | monitor loop #506: job 0:6665275157 is in state 'finished'
[2025-05-24 10:14:41] 2025-05-24 14:14:15,433 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 10:14:41] 2025-05-24 14:14:15,573 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-24 10:14:41] 2025-05-24 14:14:15,574 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6665275157/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 10:14:41] 2025-05-24 14:14:15,574 | INFO     | extracted standard info from prmon json
[2025-05-24 10:14:41] 2025-05-24 14:14:15,574 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 10:14:41] 2025-05-24 14:14:15,574 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 10:14:41] 2025-05-24 14:14:15,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 10:14:41] 2025-05-24 14:14:15,584 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 10:14:41] 2025-05-24 14:14:15,586 | INFO     | fitting pss+swap vs Time
[2025-05-24 10:14:41] 2025-05-24 14:14:15,586 | INFO     | sum of square deviations: 650243417.5
[2025-05-24 10:14:41] 2025-05-24 14:14:15,586 | INFO     | sum of deviations: 16265057873.8125
[2025-05-24 10:14:41] 2025-05-24 14:14:15,586 | INFO     | mean x: 1748092098.5625
[2025-05-24 10:14:41] 2025-05-24 14:14:15,586 | INFO     | mean y: 2102840.8359375
[2025-05-24 10:14:41] 2025-05-24 14:14:15,586 | INFO     | -- intersect: -43724320813.231125
[2025-05-24 10:14:41] 2025-05-24 14:14:15,586 | INFO     | intersect: -43724320813.231125
[2025-05-24 10:14:41] 2025-05-24 14:14:15,587 | INFO     | chi2: 2.866027363457949
[2025-05-24 10:14:41] 2025-05-24 14:14:15,587 | INFO     | sum of square deviations: 576979367.4796736
[2025-05-24 10:14:41] 2025-05-24 14:14:15,587 | INFO     | sum of deviations: 22630449524.5122
[2025-05-24 10:14:41] 2025-05-24 14:14:15,587 | INFO     | mean x: 1748091946.0650406
[2025-05-24 10:14:41] 2025-05-24 14:14:15,587 | INFO     | mean y: 2115648.56097561
[2025-05-24 10:14:41] 2025-05-24 14:14:15,587 | INFO     | -- intersect: -68562045878.45388
[2025-05-24 10:14:41] 2025-05-24 14:14:15,587 | INFO     | intersect: -68562045878.45388
[2025-05-24 10:14:41] 2025-05-24 14:14:15,587 | INFO     | chi2: 2.215847891512115
[2025-05-24 10:14:41] 2025-05-24 14:14:15,587 | INFO     | current chi2=2.215847891512115 (change=22.685738462781906 %)
[2025-05-24 10:14:41] 2025-05-24 14:14:15,587 | INFO     | right removable region: 122
[2025-05-24 10:14:41] 2025-05-24 14:14:15,588 | INFO     | sum of square deviations: 576974487.4796736
[2025-05-24 10:14:41] 2025-05-24 14:14:15,600 | INFO     | sum of deviations: -6753288979.504065
[2025-05-24 10:14:41] 2025-05-24 14:14:15,600 | INFO     | mean x: 1748092251.0650406
[2025-05-24 10:14:41] 2025-05-24 14:14:15,600 | INFO     | mean y: 2150183.81300813
[2025-05-24 10:14:41] 2025-05-24 14:14:15,600 | INFO     | -- intersect: 20462971919.34925
[2025-05-24 10:14:41] 2025-05-24 14:14:15,600 | INFO     | intersect: 20462971919.34925
[2025-05-24 10:14:41] 2025-05-24 14:14:15,601 | INFO     | chi2: 0.7282318888582417
[2025-05-24 10:14:41] 2025-05-24 14:14:15,601 | INFO     | current chi2=0.7282318888582417 (change=74.59089546236545 %)
[2025-05-24 10:14:41] 2025-05-24 14:14:15,601 | INFO     | sum of square deviations: 509426594.95762706
[2025-05-24 10:14:41] 2025-05-24 14:14:15,601 | INFO     | sum of deviations: -5896141715.822035
[2025-05-24 10:14:41] 2025-05-24 14:14:15,601 | INFO     | mean x: 1748092403.5677967
[2025-05-24 10:14:41] 2025-05-24 14:14:15,601 | INFO     | mean y: 2148262.415254237
[2025-05-24 10:14:41] 2025-05-24 14:14:15,601 | INFO     | -- intersect: 20234701187.228703
[2025-05-24 10:14:41] 2025-05-24 14:14:15,601 | INFO     | intersect: 20234701187.228703
[2025-05-24 10:14:41] 2025-05-24 14:14:15,601 | INFO     | chi2: 0.7266210517563385
[2025-05-24 10:14:41] 2025-05-24 14:14:15,601 | INFO     | current chi2=0.7266210517563385 (change=0.22119837465903758 %)
[2025-05-24 10:14:41] 2025-05-24 14:14:15,601 | INFO     | left removable region: 20
[2025-05-24 10:14:41] 2025-05-24 14:14:15,602 | INFO     | sum of square deviations: 329023057.2549027
[2025-05-24 10:14:41] 2025-05-24 14:14:15,602 | INFO     | sum of deviations: 130884261.37254906
[2025-05-24 10:14:41] 2025-05-24 14:14:15,602 | INFO     | mean x: 1748092525.5490196
[2025-05-24 10:14:41] 2025-05-24 14:14:15,602 | INFO     | mean y: 2165957.225490196
[2025-05-24 10:14:41] 2025-05-24 14:14:15,602 | INFO     | -- intersect: -693219347.7627304
[2025-05-24 10:14:41] 2025-05-24 14:14:15,602 | INFO     | intersect: -693219347.7627304
[2025-05-24 10:14:41] 2025-05-24 14:14:15,602 | INFO     | chi2: 0.03410961519891694
[2025-05-24 10:14:41] 2025-05-24 14:14:15,602 | INFO     | -- intersect: -693219347.7627304
[2025-05-24 10:14:41] 2025-05-24 14:14:15,602 | INFO     | current memory leak: 0.40 B/s (using 102 data points, chi2=0.03)
[2025-05-24 10:14:41] 2025-05-24 14:14:15,603 | INFO     | ..............................
[2025-05-24 10:14:41] 2025-05-24 14:14:15,603 | INFO     | . Timing measurements:
[2025-05-24 10:14:41] 2025-05-24 14:14:15,603 | INFO     | . get job = 0 s
[2025-05-24 10:14:41] 2025-05-24 14:14:15,603 | INFO     | . initial setup = 8 s
[2025-05-24 10:14:41] 2025-05-24 14:14:15,603 | INFO     | . payload setup = 51 s
[2025-05-24 10:14:41] 2025-05-24 14:14:15,603 | INFO     | . stage-in = 0 s
[2025-05-24 10:14:41] 2025-05-24 14:14:15,603 | INFO     | . payload execution = 7797 s
[2025-05-24 10:14:41] 2025-05-24 14:14:15,603 | INFO     | . stage-out = 2 s
[2025-05-24 10:14:41] 2025-05-24 14:14:15,603 | INFO     | . log creation = 0 s
[2025-05-24 10:14:41] 2025-05-24 14:14:15,603 | INFO     | ..............................
[2025-05-24 10:14:41] 2025-05-24 14:14:16,138 | INFO     | 
[2025-05-24 10:14:41] 2025-05-24 14:14:16,138 | INFO     | job summary report
[2025-05-24 10:14:41] 2025-05-24 14:14:16,138 | INFO     | --------------------------------------------------
[2025-05-24 10:14:41] 2025-05-24 14:14:16,138 | INFO     | PanDA job id: 6665275157
[2025-05-24 10:14:41] 2025-05-24 14:14:16,138 | INFO     | task id: 44871837
[2025-05-24 10:14:41] 2025-05-24 14:14:16,138 | INFO     | errors: (none)
[2025-05-24 10:14:41] 2025-05-24 14:14:16,138 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 10:14:41] 2025-05-24 14:14:16,138 | INFO     | pilot state: finished 
[2025-05-24 10:14:41] 2025-05-24 14:14:16,138 | INFO     | transexitcode: 0
[2025-05-24 10:14:41] 2025-05-24 14:14:16,138 | INFO     | exeerrorcode: 0
[2025-05-24 10:14:41] 2025-05-24 14:14:16,138 | INFO     | exeerrordiag: 
[2025-05-24 10:14:41] 2025-05-24 14:14:16,139 | INFO     | exitcode: 0
[2025-05-24 10:14:41] 2025-05-24 14:14:16,139 | INFO     | exitmsg: OK
[2025-05-24 10:14:41] 2025-05-24 14:14:16,139 | INFO     | cpuconsumptiontime: 27046 s
[2025-05-24 10:14:41] 2025-05-24 14:14:16,139 | INFO     | nevents: 400
[2025-05-24 10:14:41] 2025-05-24 14:14:16,139 | INFO     | neventsw: 0
[2025-05-24 10:14:41] 2025-05-24 14:14:16,139 | INFO     | pid: 374800
[2025-05-24 10:14:41] 2025-05-24 14:14:16,139 | INFO     | pgrp: 374800
[2025-05-24 10:14:41] 2025-05-24 14:14:16,139 | INFO     | corecount: 8
[2025-05-24 10:14:41] 2025-05-24 14:14:16,139 | INFO     | event service: False
[2025-05-24 10:14:41] 2025-05-24 14:14:16,139 | INFO     | sizes: {0: 2393734, 1: 2393734, 12: 2393762, 22: 2393790, 31: 2394024, 33: 2394052, 7853: 2421573, 7855: 2430514, 7856: 2430570, 7915: 2430740}
[2025-05-24 10:14:41] 2025-05-24 14:14:16,139 | INFO     | --------------------------------------------------
[2025-05-24 10:14:41] 2025-05-24 14:14:16,139 | INFO     | 
[2025-05-24 10:14:41] 2025-05-24 14:14:16,139 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-05-24 10:14:41] 2025-05-24 14:14:16,426 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 10:14:41] 2025-05-24 14:14:16,426 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 10:14:41] 2025-05-24 14:14:16,426 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 10:14:41] 2025-05-24 14:14:16,426 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 10:14:41] 2025-05-24 14:14:16,426 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 10:14:41] 2025-05-24 14:14:16,426 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 10:14:41] 2025-05-24 14:14:16,426 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 10:14:41] 2025-05-24 14:14:16,426 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 10:14:41] 2025-05-24 14:14:16,426 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 10:14:41] 2025-05-24 14:14:16,426 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 10:14:41] 2025-05-24 14:14:16,426 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 10:14:41] 2025-05-24 14:14:16,426 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 10:14:41] 2025-05-24 14:14:16,427 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 10:14:41] 2025-05-24 14:14:16,427 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 10:14:41] 2025-05-24 14:14:16,427 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 10:14:41] 2025-05-24 14:14:16,427 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 10:14:41] 2025-05-24 14:14:16,427 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 10:14:41] 2025-05-24 14:14:16,427 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 10:14:41] 2025-05-24 14:14:16,427 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 10:14:41] 2025-05-24 14:14:16,427 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 10:14:41] 2025-05-24 14:14:16,427 | INFO     | job 6665275157 has completed (purged errors)
[2025-05-24 10:14:41] 2025-05-24 14:14:16,427 | INFO     | overall cleanup function is called
[2025-05-24 10:14:41] 2025-05-24 14:14:17,435 | INFO     | --- collectZombieJob: --- 10, [374800]
[2025-05-24 10:14:41] 2025-05-24 14:14:17,435 | INFO     | zombie collector waiting for pid 374800
[2025-05-24 10:14:41] 2025-05-24 14:14:17,435 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 10:14:41] 2025-05-24 14:14:17,435 | INFO     | collected zombie processes
[2025-05-24 10:14:41] 2025-05-24 14:14:17,435 | INFO     | will attempt to kill all subprocesses of pid=374800
[2025-05-24 10:14:41] 2025-05-24 14:14:18,386 | INFO     | process IDs to be killed: [374800] (in reverse order)
[2025-05-24 10:14:41] 2025-05-24 14:14:18,869 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 10:14:41] 2025-05-24 14:14:18,869 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 10:14:41] 2025-05-24 14:14:18,917 | INFO     | did not find any defunct processes belonging to 374800
[2025-05-24 10:14:41] 2025-05-24 14:14:18,956 | INFO     | did not find any defunct processes belonging to 374800
[2025-05-24 10:14:41] 2025-05-24 14:14:18,957 | INFO     | ready for new job
[2025-05-24 10:14:41] 2025-05-24 14:14:18,957 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 10:14:41] 2025-05-24 14:14:18,962 | INFO     | **************************************
[2025-05-24 10:14:41] 2025-05-24 14:14:18,962 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 10:14:41] 2025-05-24 14:14:18,962 | INFO     | **************************************
[2025-05-24 10:14:41] 2025-05-24 14:14:18,963 | INFO     | 
[2025-05-24 10:14:41] 2025-05-24 14:14:18,971 | INFO     | architecture information:
[2025-05-24 10:14:41] 2025-05-24 14:14:18,983 | INFO     | executing command: cat /etc/os-release
[2025-05-24 10:14:41] 2025-05-24 14:14:19,137 | INFO     | cat /etc/os-release:
[2025-05-24 10:14:41] NAME="CentOS Linux"
[2025-05-24 10:14:41] VERSION="7 (Core)"
[2025-05-24 10:14:41] ID="centos"
[2025-05-24 10:14:41] ID_LIKE="rhel fedora"
[2025-05-24 10:14:41] VERSION_ID="7"
[2025-05-24 10:14:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 10:14:41] ANSI_COLOR="0;31"
[2025-05-24 10:14:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 10:14:41] HOME_URL="https://www.centos.org/"
[2025-05-24 10:14:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 10:14:41] 
[2025-05-24 10:14:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 10:14:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 10:14:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 10:14:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 10:14:41] 
[2025-05-24 10:14:41] 2025-05-24 14:14:19,137 | INFO     | **************************************
[2025-05-24 10:14:41] 2025-05-24 14:14:19,641 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-05-24 10:14:41] 2025-05-24 14:14:19,817 | INFO     | sufficient remaining disk space (72279392256 B)
[2025-05-24 10:14:41] 2025-05-24 14:14:19,818 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 10:14:41] 2025-05-24 14:14:19,818 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 10:14:41] 2025-05-24 14:14:19,818 | INFO     | update_server=False
[2025-05-24 10:14:41] 2025-05-24 14:14:19,818 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 10:14:41] 2025-05-24 14:14:19,818 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 10:14:41] 2025-05-24 14:14:19,818 | INFO     | aborting loop
[2025-05-24 10:14:41] 2025-05-24 14:14:19,818 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 10:14:41] 2025-05-24 14:14:20,164 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 10:14:41] 2025-05-24 14:14:20,164 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 10:14:41] 2025-05-24 14:14:20,164 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 10:14:41] 2025-05-24 14:14:20,319 | INFO     | all data control threads have been joined
[2025-05-24 10:14:41] 2025-05-24 14:14:20,740 | INFO     | all job control threads have been joined
[2025-05-24 10:14:41] 2025-05-24 14:14:20,755 | INFO     | all payload control threads have been joined
[2025-05-24 10:14:41] 2025-05-24 14:14:20,758 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 10:14:41] 2025-05-24 14:14:20,831 | INFO     | [job] retrieve thread has finished
[2025-05-24 10:14:41] 2025-05-24 14:14:20,831 | INFO     | [job] job monitor thread has finished
[2025-05-24 10:14:41] 2025-05-24 14:14:20,988 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 10:14:41] 2025-05-24 14:14:21,174 | INFO     | [payload] validate_post thread has finished
[2025-05-24 10:14:41] 2025-05-24 14:14:21,326 | INFO     | [data] control thread has finished
[2025-05-24 10:14:41] 2025-05-24 14:14:21,342 | INFO     | [data] copytool_in thread has finished
[2025-05-24 10:14:41] 2025-05-24 14:14:21,349 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 10:14:41] 2025-05-24 14:14:21,746 | INFO     | [job] control thread has finished
[2025-05-24 10:14:41] 2025-05-24 14:14:21,761 | INFO     | [payload] control thread has finished
[2025-05-24 10:14:41] 2025-05-24 14:14:21,764 | INFO     | [job] queue monitor thread has finished
[2025-05-24 10:14:41] 2025-05-24 14:14:21,837 | INFO     | [data] copytool_out thread has finished
[2025-05-24 10:14:41] 2025-05-24 14:14:21,890 | INFO     | [payload] failed_post thread has finished
[2025-05-24 10:14:41] 2025-05-24 14:14:22,091 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 10:14:41] 2025-05-24 14:14:22,266 | INFO     | [job] validate thread has finished
[2025-05-24 10:14:41] 2025-05-24 14:14:22,274 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 10:14:41] 2025-05-24 14:14:26,283 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 10:14:41] 2025-05-24 14:14:30,373 | INFO     | job.realtimelogging is not enabled
[2025-05-24 10:14:41] 2025-05-24 14:14:31,379 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 10:14:41] 2025-05-24 14:14:33,449 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140654674859840)>', '<ExcThread(monitor, started 140654038464256)>']
[2025-05-24 10:14:41] 2025-05-24 14:14:34,274 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 10:14:41] 2025-05-24 14:14:34,274 | INFO     | [monitor] control thread has ended
[2025-05-24 10:14:41] 2025-05-24 14:14:38,475 | INFO     | all workflow threads have been joined
[2025-05-24 10:14:41] 2025-05-24 14:14:38,475 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 10:14:41] 2025-05-24 14:14:38,475 | INFO     | traces error code: 0
[2025-05-24 10:14:41] 2025-05-24 14:14:38,475 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 10:14:41] 2025-05-24 14:14:38,670 [wrapper] ==== pilot stdout END ====
[2025-05-24 10:14:41] 2025-05-24 14:14:38,696 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 10:14:41] 2025-05-24 14:14:38,821 [wrapper] pilotpid: 337523
[2025-05-24 10:14:41] 2025-05-24 14:14:38,863 [wrapper] Pilot exit status: 0
[2025-05-24 10:14:41] 2025-05-24 14:14:39,138 [wrapper] pandaids: 6665275157
[2025-05-24 10:14:41] 2025-05-24 14:14:39,788 [wrapper] cleanup supervisor_pilot 2002067 337524
[2025-05-24 10:14:41] 2025-05-24 14:14:39,892 [wrapper] Test setup, not cleaning
[2025-05-24 10:14:41] 2025-05-24 14:14:39,962 [wrapper] apfmon messages muted
[2025-05-24 10:14:41] 2025-05-24 14:14:40,006 [wrapper] ==== wrapper stdout END ====
[2025-05-24 10:14:41] 2025-05-24 14:14:40,047 [wrapper] ==== wrapper stderr END ====
[2025-05-24 10:14:41]  *** Error codes and diagnostics ***
[2025-05-24 10:14:41]     "exeErrorCode": 0,
[2025-05-24 10:14:41]     "exeErrorDiag": "",
[2025-05-24 10:14:41]     "pilotErrorCode": 0,
[2025-05-24 10:14:41]     "pilotErrorDiag": "",
[2025-05-24 10:14:41]  *** Listing of results directory ***
[2025-05-24 10:14:41] total 412036
[2025-05-24 10:14:41] -rw-r--r--. 1 boincer umatlas    495897 May 24 02:34 pilot3.tar.gz
[2025-05-24 10:14:41] -rw-r--r--. 1 boincer umatlas      5111 May 24 02:47 queuedata.json
[2025-05-24 10:14:41] -rwx------. 1 boincer umatlas     37140 May 24 02:47 runpilot2-wrapper.sh
[2025-05-24 10:14:41] -rw-r--r--. 1 boincer umatlas       100 May 24 07:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 10:14:41] -rwxr-xr-x. 1 boincer umatlas      7986 May 24 07:59 run_atlas
[2025-05-24 10:14:41] -rw-r--r--. 1 boincer umatlas       105 May 24 07:59 job.xml
[2025-05-24 10:14:41] -rw-r--r--. 2 boincer umatlas 225511861 May 24 07:59 EVNT.44871834._000334.pool.root.1
[2025-05-24 10:14:41] -rw-r--r--. 2 boincer umatlas     15093 May 24 07:59 start_atlas.sh
[2025-05-24 10:14:41] drwxrwx--x. 2 boincer umatlas      4096 May 24 07:59 shared
[2025-05-24 10:14:41] -rw-r--r--. 2 boincer umatlas    508876 May 24 07:59 input.tar.gz
[2025-05-24 10:14:41] -rw-r--r--. 1 boincer umatlas         0 May 24 07:59 boinc_lockfile
[2025-05-24 10:14:41] -rw-r--r--. 1 boincer umatlas      2555 May 24 07:59 pandaJob.out
[2025-05-24 10:14:41] -rw-------. 1 boincer umatlas    988564 May 24 08:01 agis_schedconf.cvmfs.json
[2025-05-24 10:14:41] -rw-------. 1 boincer umatlas   1596740 May 24 08:01 agis_ddmendpoints.agis.ALL.json
[2025-05-24 10:14:41] drwx------. 4 boincer umatlas      4096 May 24 08:01 pilot3
[2025-05-24 10:14:41] -rw-r--r--. 1 boincer umatlas      7158 May 24 10:11 init_data.xml
[2025-05-24 10:14:41] -rw-------. 1 boincer umatlas 190608899 May 24 10:12 HITS.44871837._008332.pool.root.1
[2025-05-24 10:14:41] -rw-r--r--. 1 boincer umatlas       530 May 24 10:12 boinc_task_state.xml
[2025-05-24 10:14:41] -rw-------. 1 boincer umatlas      1045 May 24 10:13 memory_monitor_summary.json
[2025-05-24 10:14:41] -rw-------. 1 boincer umatlas    325689 May 24 10:13 log.44871837._008332.job.log.tgz.1
[2025-05-24 10:14:41] -rw-------. 1 boincer umatlas      7683 May 24 10:14 heartbeat.json
[2025-05-24 10:14:41] -rw-------. 1 boincer umatlas        95 May 24 10:14 pilot_heartbeat.json
[2025-05-24 10:14:41] -rw-------. 1 boincer umatlas      4425 May 24 10:14 pilotlog.txt
[2025-05-24 10:14:41] -rw-r--r--. 1 boincer umatlas      8192 May 24 10:14 boinc_mmap_file
[2025-05-24 10:14:41] -rw-r--r--. 1 boincer umatlas        27 May 24 10:14 wrapper_checkpoint.txt
[2025-05-24 10:14:41] -rw-------. 1 boincer umatlas    660724 May 24 10:14 log.44871837._008332.job.log.1
[2025-05-24 10:14:41] -rw-------. 1 boincer umatlas       357 May 24 10:14 output.list
[2025-05-24 10:14:41] -rw-r--r--. 1 boincer umatlas       620 May 24 10:14 runtime_log
[2025-05-24 10:14:41] -rw-------. 1 boincer umatlas   1003520 May 24 10:14 result.tar.gz
[2025-05-24 10:14:41] -rw-------. 1 boincer umatlas       651 May 24 10:14 Th5MDmmqxc7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmh2PKDmLaquSo.diag
[2025-05-24 10:14:41] -rw-r--r--. 1 boincer umatlas      8654 May 24 10:14 runtime_log.err
[2025-05-24 10:14:41] -rw-r--r--. 1 boincer umatlas     21140 May 24 10:14 stderr.txt
[2025-05-24 10:14:41] HITS file was successfully produced:
[2025-05-24 10:14:41] -rw-------. 1 boincer umatlas 190608899 May 24 10:12 shared/HITS.pool.root.1
[2025-05-24 10:14:41]  *** Contents of shared directory: ***
[2025-05-24 10:14:41] total 407876
[2025-05-24 10:14:41] -rw-r--r--. 2 boincer umatlas 225511861 May 24 07:59 ATLAS.root_0
[2025-05-24 10:14:41] -rw-r--r--. 2 boincer umatlas     15093 May 24 07:59 start_atlas.sh
[2025-05-24 10:14:41] -rw-r--r--. 2 boincer umatlas    508876 May 24 07:59 input.tar.gz
[2025-05-24 10:14:41] -rw-------. 1 boincer umatlas 190608899 May 24 10:12 HITS.pool.root.1
[2025-05-24 10:14:41] -rw-------. 1 boincer umatlas   1003520 May 24 10:14 result.tar.gz
10:14:43 (324065): run_atlas exited; CPU time 27313.327335
10:14:43 (324065): called boinc_finish(0)

</stderr_txt>
]]>

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