Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-25 03:59:05 (17796): Detected: vboxwrapper 26206
2025-05-25 03:59:05 (17796): Detected: BOINC client v7.16.20
2025-05-25 03:59:06 (17796): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-05-25 03:59:06 (17796): Successfully copied 'init_data.xml' to the shared directory.
2025-05-25 03:59:07 (17796): Create VM. (boinc_c1eeec0e5b0641dc, slot#10)
2025-05-25 03:59:07 (17796): Setting Memory Size for VM. (4800MB)
2025-05-25 03:59:08 (17796): Setting CPU Count for VM. (8)
2025-05-25 03:59:08 (17796): Setting Chipset Options for VM.
2025-05-25 03:59:08 (17796): Setting Graphics Controller Options for VM.
2025-05-25 03:59:09 (17796): Setting Boot Options for VM.
2025-05-25 03:59:09 (17796): Setting Network Configuration for NAT.
2025-05-25 03:59:09 (17796): Enabling VM Network Access.
2025-05-25 03:59:09 (17796): Disabling USB Support for VM.
2025-05-25 03:59:10 (17796): Disabling COM Port Support for VM.
2025-05-25 03:59:10 (17796): Disabling LPT Port Support for VM.
2025-05-25 03:59:11 (17796): Disabling Audio Support for VM.
2025-05-25 03:59:11 (17796): Disabling Clipboard Support for VM.
2025-05-25 03:59:11 (17796): Disabling Drag and Drop Support for VM.
2025-05-25 03:59:11 (17796): Adding storage controller(s) to VM.
2025-05-25 03:59:12 (17796): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-25 03:59:12 (17796): Adding VirtualBox Guest Additions to VM.
2025-05-25 03:59:13 (17796): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-25 03:59:13 (17796): forwarding host port 52519 to guest port 80
2025-05-25 03:59:14 (17796): Enabling remote desktop for VM.
2025-05-25 03:59:14 (17796): Required extension pack not installed, remote desktop not enabled.
2025-05-25 03:59:14 (17796): Enabling shared directory for VM.
2025-05-25 03:59:14 (17796): Starting VM using VBoxManage interface. (boinc_c1eeec0e5b0641dc, slot#10)
2025-05-25 03:59:18 (17796): Successfully started VM. (PID = '384')
2025-05-25 03:59:18 (17796): Reporting VM Process ID to BOINC.
2025-05-25 03:59:18 (17796): Guest Log: BIOS: VirtualBox 6.1.50
2025-05-25 03:59:18 (17796): Guest Log: CPUID EDX: 0x178bfbff
2025-05-25 03:59:18 (17796): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-25 03:59:18 (17796): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-25 03:59:18 (17796): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-25 03:59:18 (17796): Detected: Web Application Enabled (http://localhost:52519)
2025-05-25 03:59:18 (17796): Preference change detected
2025-05-25 03:59:18 (17796): Setting CPU throttle for VM. (100%)
2025-05-25 03:59:18 (17796): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-25 03:59:20 (17796): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-25 03:59:20 (17796): Guest Log: BIOS: Booting from Hard Disk...
2025-05-25 03:59:23 (17796): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-25 03:59:23 (17796): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-25 03:59:23 (17796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-25 03:59:28 (17796): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-25 03:59:28 (17796): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-25 03:59:34 (17796): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-25 03:59:34 (17796): Guest Log: 00:00:00.000099 main     Log opened 2025-05-25T03:59:31.621263000Z
2025-05-25 03:59:34 (17796): Guest Log: 00:00:00.000169 main     OS Product: Linux
2025-05-25 03:59:34 (17796): Guest Log: 00:00:00.000190 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-25 03:59:34 (17796): Guest Log: 00:00:00.000207 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-25 03:59:34 (17796): Guest Log: 00:00:00.000225 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-25 03:59:34 (17796): Guest Log: 00:00:00.000225 main     Process ID: 1366
2025-05-25 03:59:34 (17796): Guest Log: 00:00:00.000226 main     Package type: LINUX_64BITS_GENERIC
2025-05-25 03:59:34 (17796): Guest Log: 00:00:00.001157 main     5.2.32 r132073 started. Verbose level = 0
2025-05-25 03:59:34 (17796): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-25 03:59:34 (17796): Guest Log: [INFO] Mounting shared directory
2025-05-25 03:59:34 (17796): Guest Log: [INFO] Checking for init_data.xml
2025-05-25 03:59:39 (17796): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-25 03:59:39 (17796): Guest Log: [INFO] Detected branch: prod
2025-05-25 03:59:39 (17796): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-25 03:59:39 (17796): Guest Log: Copying input files
2025-05-25 03:59:40 (17796): Guest Log: Copied input files into RunAtlas.
2025-05-25 03:59:40 (17796): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-25 03:59:40 (17796): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-25 03:59:40 (17796): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-25 03:59:40 (17796): Guest Log: Further information can be found at the LHC@home message board.
2025-05-25 03:59:44 (17796): Guest Log: 00:00:10.004794 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 146 734 000ns (GuestNow=1 748 138 383 477 088 000 ns GuestLast=1 748 145 571 623 822 000 ns fSetTimeLastLoop=true )
2025-05-25 03:59:48 (17796): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-25 03:59:48 (17796): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-25 03:59:48 (17796): Guest Log: 2.6.3.0 1648 0 32212 146385 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-05-25 03:59:49 (17796): Guest Log: copied the webapp to /var/www
2025-05-25 03:59:49 (17796): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-25 03:59:49 (17796): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-25 03:59:49 (17796): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-25 03:59:49 (17796): Guest Log:  *** Starting ATLAS job. (PandaID=6665278301 taskID=44871837) ***
2025-05-25 05:24:18 (17796): Guest Log:  *** Job finished ***
2025-05-25 05:24:18 (17796): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-25 05:24:18 (17796): Guest Log: 2025-05-25 03:24:05,019 | INFO     | [data] queue_monitor thread has finished
2025-05-25 05:24:18 (17796): Guest Log: 2025-05-25 03:24:08,245 | INFO     | job.realtimelogging is not enabled
2025-05-25 05:24:18 (17796): Guest Log: 2025-05-25 03:24:09,267 | INFO     | [payload] run_realtimelog thread has finished
2025-05-25 05:24:18 (17796): Guest Log: 2025-05-25 03:24:09,713 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140683876947776)>', '<ExcThread(monitor, started 140682903668480)>']
2025-05-25 05:24:18 (17796): Guest Log: 2025-05-25 03:24:10,562 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-25 05:24:18 (17796): Guest Log: 2025-05-25 03:24:10,563 | INFO     | [monitor] control thread has ended
2025-05-25 05:24:18 (17796): Guest Log: 2025-05-25 03:24:14,728 | INFO     | all workflow threads have been joined
2025-05-25 05:24:18 (17796): Guest Log: 2025-05-25 03:24:14,729 | INFO     | end of generic workflow (traces error code: 0)
2025-05-25 05:24:18 (17796): Guest Log: 2025-05-25 03:24:14,729 | INFO     | traces error code: 0
2025-05-25 05:24:18 (17796): Guest Log: 2025-05-25 03:24:14,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-25 05:24:18 (17796): Guest Log: 2025-05-25 03:24:14,784 [wrapper] ==== pilot stdout END ====
2025-05-25 05:24:18 (17796): Guest Log: 2025-05-25 03:24:14,789 [wrapper] ==== wrapper stdout RESUME ====
2025-05-25 05:24:18 (17796): Guest Log: 2025-05-25 03:24:14,793 [wrapper] pilotpid: 5996
2025-05-25 05:24:18 (17796): Guest Log: 2025-05-25 03:24:14,798 [wrapper] Pilot exit status: 0
2025-05-25 05:24:18 (17796): Guest Log: 2025-05-25 03:24:14,868 [wrapper] pandaids: 6665278301
2025-05-25 05:24:18 (17796): Guest Log: 2025-05-25 03:24:14,899 [wrapper] cleanup supervisor_pilot   940 5997
2025-05-25 05:24:18 (17796): Guest Log: 2025-05-25 03:24:14,904 [wrapper] Test setup, not cleaning
2025-05-25 05:24:18 (17796): Guest Log: 2025-05-25 03:24:14,908 [wrapper] apfmon messages muted
2025-05-25 05:24:18 (17796): Guest Log: 2025-05-25 03:24:14,912 [wrapper] ==== wrapper stdout END ====
2025-05-25 05:24:18 (17796): Guest Log: 2025-05-25 03:24:14,917 [wrapper] ==== wrapper stderr END ====
2025-05-25 05:24:18 (17796): Guest Log:  *** Error codes and diagnostics ***
2025-05-25 05:24:18 (17796): Guest Log:     "exeErrorCode": 0,
2025-05-25 05:24:18 (17796): Guest Log:     "exeErrorDiag": "",
2025-05-25 05:24:18 (17796): Guest Log:     "pilotErrorCode": 0,
2025-05-25 05:24:18 (17796): Guest Log:     "pilotErrorDiag": "",
2025-05-25 05:24:18 (17796): Guest Log:  *** Listing of results directory ***
2025-05-25 05:24:18 (17796): Guest Log: total 200708
2025-05-25 05:24:18 (17796): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 24 07:04 pilot3.tar.gz
2025-05-25 05:24:18 (17796): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 24 07:13 queuedata.json
2025-05-25 05:24:18 (17796): Guest Log: -rwx------. 1 atlas atlas     37140 May 24 07:13 runpilot2-wrapper.sh
2025-05-25 05:24:18 (17796): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 25 01:59 start_atlas.sh
2025-05-25 05:24:18 (17796): Guest Log: -rwxr-xr-x. 1 atlas atlas    508879 May 25 01:59 input.tar.gz
2025-05-25 05:24:18 (17796): Guest Log: -rwxr-xr-x. 1 atlas atlas      8793 May 25 01:59 init_data.xml
2025-05-25 05:24:18 (17796): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 25 01:59 EVNT.44871834._000384.pool.root.1 -> /data/./ATLAS.root_0
2025-05-25 05:24:18 (17796): Guest Log: -rw-r--r--. 1 atlas atlas      2556 May 25 01:59 pandaJob.out
2025-05-25 05:24:18 (17796): Guest Log: -rw-------. 1 atlas atlas    990803 May 25 02:00 agis_schedconf.cvmfs.json
2025-05-25 05:24:18 (17796): Guest Log: -rw-------. 1 atlas atlas   1596740 May 25 02:00 agis_ddmendpoints.agis.ALL.json
2025-05-25 05:24:18 (17796): Guest Log: drwx------. 4 atlas atlas      4096 May 25 02:00 pilot3
2025-05-25 05:24:18 (17796): Guest Log: -rw-------. 1 atlas atlas        95 May 25 03:23 pilot_heartbeat.json
2025-05-25 05:24:18 (17796): Guest Log: -rw-------. 1 atlas atlas 200267536 May 25 03:23 HITS.44871837._009579.pool.root.1
2025-05-25 05:24:18 (17796): Guest Log: -rw-------. 1 atlas atlas      1026 May 25 03:23 memory_monitor_summary.json
2025-05-25 05:24:18 (17796): Guest Log: -rw-------. 1 atlas atlas    292402 May 25 03:23 log.44871837._009579.job.log.tgz.1
2025-05-25 05:24:18 (17796): Guest Log: -rw-------. 1 atlas atlas      7707 May 25 03:23 heartbeat.json
2025-05-25 05:24:18 (17796): Guest Log: -rw-------. 1 atlas atlas      4485 May 25 03:24 pilotlog.txt
2025-05-25 05:24:18 (17796): Guest Log: -rw-------. 1 atlas atlas    454044 May 25 03:24 log.44871837._009579.job.log.1
2025-05-25 05:24:18 (17796): Guest Log: -rw-------. 1 atlas atlas       357 May 25 03:24 output.list
2025-05-25 05:24:18 (17796): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 25 03:24 runtime_log
2025-05-25 05:24:18 (17796): Guest Log: -rw-------. 1 atlas atlas    768000 May 25 03:24 result.tar.gz
2025-05-25 05:24:18 (17796): Guest Log: -rw-r--r--. 1 atlas atlas      8589 May 25 03:24 runtime_log.err
2025-05-25 05:24:18 (17796): Guest Log: -rw-------. 1 atlas atlas       652 May 25 03:24 A1iLDmbFyc7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6BQKDmHh8zPo.diag
2025-05-25 05:24:18 (17796): Guest Log: Looking for outputfile HITS.44871837._009579.pool.root.1
2025-05-25 05:24:18 (17796): Guest Log: HITS file was successfully produced
2025-05-25 05:24:18 (17796): Guest Log: -rw-------. 1 atlas atlas 200267536 May 25 03:23 /home/atlas/RunAtlas/HITS.44871837._009579.pool.root.1
2025-05-25 05:24:18 (17796): Guest Log: Successfully finished the ATLAS job!
2025-05-25 05:24:18 (17796): Guest Log: Copying the results back to the shared directory!
2025-05-25 05:24:18 (17796): Guest Log:  *** Contents of shared directory: ***
2025-05-25 05:24:19 (17796): Guest Log: total 416800
2025-05-25 05:24:19 (17796): Guest Log: -rwxrwxrwx. 1 root root 225219055 May 25 01:59 ATLAS.root_0
2025-05-25 05:24:19 (17796): Guest Log: -rwxrwxrwx. 1 root root 200267536 May 25  2025 HITS.pool.root.1
2025-05-25 05:24:19 (17796): Guest Log: -rwxrwxrwx. 1 root root      8793 May 25 01:59 init_data.xml
2025-05-25 05:24:19 (17796): Guest Log: -rwxrwxrwx. 1 root root    508879 May 24 11:56 input.tar.gz
2025-05-25 05:24:19 (17796): Guest Log: -rwxrwxrwx. 1 root root    768000 May 25  2025 result.tar.gz
2025-05-25 05:24:19 (17796): Guest Log: -rwxrwxrwx. 1 root root     15093 May 24 11:56 start_atlas.sh
2025-05-25 05:24:19 (17796): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-25 05:24:19 (17796): VM Completion File Detected.
2025-05-25 05:24:19 (17796): Powering off VM.
2025-05-25 05:24:20 (17796): Successfully stopped VM.
2025-05-25 05:24:20 (17796): Deregistering VM. (boinc_c1eeec0e5b0641dc, slot#10)
2025-05-25 05:24:20 (17796): Removing network bandwidth throttle group from VM.
2025-05-25 05:24:20 (17796): Removing VM from VirtualBox.
05:24:26 (17796): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN