Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:04:29 (2660703): wrapper (7.7.26015): starting
05:04:29 (2660703): wrapper: running run_atlas (--nthreads 12)
[2025-05-24 05:04:29] Arguments: --nthreads 12
[2025-05-24 05:04:29] Threads: 12
[2025-05-24 05:04:29] Checking for CVMFS
[2025-05-24 05:04:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 05:04:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 05:04:30] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 05:04:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 05:04:30] 2.11.5.0 2109152 7735 252556 146366 0 765 40832773 45568001 14132 130560 0 75919741 99.814 43520835 23753 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-24 05:04:30] CVMFS is ok
[2025-05-24 05:04:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 05:04:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 05:04:30] Further information can be found at the LHC@home message board.
[2025-05-24 05:04:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 05:04:30] Checking for apptainer binary...
[2025-05-24 05:04:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 05:04:30] Running /usr/bin/apptainer --version
[2025-05-24 05:04:30] apptainer version 1.4.0-1.el9
[2025-05-24 05:04:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 05:04:30] wns0078.triumf.lcg
[2025-05-24 05:04:30] apptainer works
[2025-05-24 05:04:30] Set ATHENA_PROC_NUMBER=12
[2025-05-24 05:04:30] Set ATHENA_CORE_NUMBER=12
[2025-05-24 05:04:30] Starting ATLAS job with PandaID=6665378577
[2025-05-24 05:04:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 05:07:30]  *** The last 200 lines of the pilot log: ***
[2025-05-24 05:07:30] 2025-05-24 12:07:15,840 | INFO     | extracted standard info from prmon json
[2025-05-24 05:07:30] 2025-05-24 12:07:15,840 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 05:07:30] 2025-05-24 12:07:15,840 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 05:07:30] 2025-05-24 12:07:15,841 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 05:07:30] 2025-05-24 12:07:15,841 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 05:07:30] 2025-05-24 12:07:15,841 | WARNING  | found no stored workdir sizes
[2025-05-24 05:07:30] 2025-05-24 12:07:15,841 | INFO     | will not add max space = 0 B to job metrics
[2025-05-24 05:07:30] 2025-05-24 12:07:15,841 | WARNING  | wrong length of table data, x=[1748088300.0], y=[1735.0] (must be same and length>=4)
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | ..............................
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . Timing measurements:
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . get job = 0 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . initial setup = 2 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . payload setup = 3 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . stage-in = 0 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . payload execution = 14 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . stage-out = 0 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . log creation = 0 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | ..............................
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665378577/pilotlog.txt
[2025-05-24 05:07:30] 2025-05-24 12:07:15,853 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-24 05:07:30] - Log from pilotlog.txt -
[2025-05-24 05:07:30] 2025-05-24 12:07:15,840 | INFO     | extracted standard info from prmon json
[2025-05-24 05:07:30] 2025-05-24 12:07:15,840 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 05:07:30] 2025-05-24 12:07:15,840 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 05:07:30] 2025-05-24 12:07:15,841 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 05:07:30] 2025-05-24 12:07:15,841 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 05:07:30] 2025-05-24 12:07:15,841 | WARNING  | found no stored workdir sizes
[2025-05-24 05:07:30] 2025-05-24 12:07:15,841 | INFO     | will not add max space = 0 B to job metrics
[2025-05-24 05:07:30] 2025-05-24 12:07:15,841 | WARNING  | wrong length of table data, x=[1748088300.0], y=[1735.0] (must be same and length>=4)
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | ..............................
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . Timing measurements:
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . get job = 0 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . initial setup = 2 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . payload setup = 3 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . stage-in = 0 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . payload execution = 14 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . stage-out = 0 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . log creation = 0 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | ..............................
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665378577/pilotlog.txt
[2025-05-24 05:07:30] 2025-05-24 12:07:15,853 | WARNING  | 
[2025-05-24 05:07:30] [begin log extracts]
[2025-05-24 05:07:30] - Log from pilotlog.txt -
[2025-05-24 05:07:30] 2025-05-24 12:07:15,840 | INFO     | extracted standard info from prmon json
[2025-05-24 05:07:30] 2025-05-24 12:07:15,840 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 05:07:30] 2025-05-24 12:07:15,840 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 05:07:30] 2025-05-24 12:07:15,841 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 05:07:30] 2025-05-24 12:07:15,841 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 05:07:30] 2025-05-24 12:07:15,841 | WARNING  | found no stored workdir sizes
[2025-05-24 05:07:30] 2025-05-24 12:07:15,841 | INFO     | will not add max space = 0 B to job metrics
[2025-05-24 05:07:30] 2025-05-24 12:07:15,841 | WARNING  | wrong length of table data, x=[1748088300.0], y=[1735.0] (must be same and length>=4)
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | ..............................
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . Timing measurements:
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . get job = 0 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . initial setup = 2 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . payload setup = 3 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . stage-in = 0 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . payload execution = 14 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . stage-out = 0 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | . log creation = 0 s
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | ..............................
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 05:07:30] 2025-05-24 12:07:15,842 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665378577/pilotlog.txt
[2025-05-24 05:07:30] [end log extracts]
[2025-05-24 05:07:30] 2025-05-24 12:07:15,853 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-24 05:07:30] 2025-05-24 12:07:15,854 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-24 05:07:30] 2025-05-24 12:07:16,293 | INFO     | 
[2025-05-24 05:07:30] 2025-05-24 12:07:16,293 | INFO     | job summary report
[2025-05-24 05:07:30] 2025-05-24 12:07:16,293 | INFO     | --------------------------------------------------
[2025-05-24 05:07:30] 2025-05-24 12:07:16,293 | INFO     | PanDA job id: 6665378577
[2025-05-24 05:07:30] 2025-05-24 12:07:16,294 | INFO     | task id: 44871837
[2025-05-24 05:07:30] 2025-05-24 12:07:16,294 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-24 05:05:06,274 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-24 05:07:30] 2025-05-24 12:07:16,294 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 05:07:30] 2025-05-24 12:07:16,294 | INFO     | pilot state: failed 
[2025-05-24 05:07:30] 2025-05-24 12:07:16,294 | INFO     | transexitcode: 65
[2025-05-24 05:07:30] 2025-05-24 12:07:16,294 | INFO     | exeerrorcode: 65
[2025-05-24 05:07:30] 2025-05-24 12:07:16,294 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-24 05:07:30] 2025-05-24 12:07:16,294 | INFO     | exitcode: 65
[2025-05-24 05:07:30] 2025-05-24 12:07:16,294 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-24 05:07:30] 2025-05-24 12:07:16,294 | INFO     | cpuconsumptiontime: 15 s
[2025-05-24 05:07:30] 2025-05-24 12:07:16,294 | INFO     | nevents: 0
[2025-05-24 05:07:30] 2025-05-24 12:07:16,294 | INFO     | neventsw: 0
[2025-05-24 05:07:30] 2025-05-24 12:07:16,294 | INFO     | pid: 2673282
[2025-05-24 05:07:30] 2025-05-24 12:07:16,294 | INFO     | pgrp: 2673282
[2025-05-24 05:07:30] 2025-05-24 12:07:16,294 | INFO     | corecount: 12
[2025-05-24 05:07:30] 2025-05-24 12:07:16,294 | INFO     | event service: False
[2025-05-24 05:07:30] 2025-05-24 12:07:16,294 | INFO     | sizes: {0: 2393509, 1: 2393764, 4: 2393970, 11: 2393998, 22: 2417182, 23: 2421417, 24: 2421573, 144: 2421715}
[2025-05-24 05:07:30] 2025-05-24 12:07:16,294 | INFO     | --------------------------------------------------
[2025-05-24 05:07:30] 2025-05-24 12:07:16,294 | INFO     | 
[2025-05-24 05:07:30] 2025-05-24 12:07:16,294 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-24 05:07:30] 2025-05-24 12:07:16,309 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 05:07:30] 2025-05-24 12:07:16,309 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 05:07:30] 2025-05-24 12:07:16,309 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 05:07:30] 2025-05-24 12:07:16,309 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 05:07:30] 2025-05-24 12:07:16,309 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 05:07:30] 2025-05-24 12:07:16,309 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 05:07:30] 2025-05-24 12:07:16,310 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 05:07:30] 2025-05-24 12:07:16,310 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 05:07:30] 2025-05-24 12:07:16,310 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 05:07:30] 2025-05-24 12:07:16,310 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 05:07:30] 2025-05-24 12:07:16,310 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 05:07:30] 2025-05-24 12:07:16,310 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 05:07:30] 2025-05-24 12:07:16,310 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 05:07:30] 2025-05-24 12:07:16,310 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 05:07:30] 2025-05-24 12:07:16,310 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 05:07:30] 2025-05-24 12:07:16,310 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 05:07:30] 2025-05-24 12:07:16,310 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 05:07:30] 2025-05-24 12:07:16,310 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 05:07:30] 2025-05-24 12:07:16,310 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 05:07:30] 2025-05-24 12:07:16,310 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 05:07:30] 2025-05-24 12:07:16,310 | INFO     | job 6665378577 has completed (purged errors)
[2025-05-24 05:07:30] 2025-05-24 12:07:16,310 | INFO     | overall cleanup function is called
[2025-05-24 05:07:30] 2025-05-24 12:07:17,316 | INFO     | --- collectZombieJob: --- 10, [2673282]
[2025-05-24 05:07:30] 2025-05-24 12:07:17,316 | INFO     | zombie collector waiting for pid 2673282
[2025-05-24 05:07:30] 2025-05-24 12:07:17,316 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 05:07:30] 2025-05-24 12:07:17,316 | INFO     | collected zombie processes
[2025-05-24 05:07:30] 2025-05-24 12:07:17,316 | INFO     | will attempt to kill all subprocesses of pid=2673282
[2025-05-24 05:07:30] 2025-05-24 12:07:17,490 | INFO     | process IDs to be killed: [2673282] (in reverse order)
[2025-05-24 05:07:30] 2025-05-24 12:07:17,557 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 05:07:30] 2025-05-24 12:07:17,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 05:07:30] 2025-05-24 12:07:17,565 | INFO     | did not find any defunct processes belonging to 2673282
[2025-05-24 05:07:30] 2025-05-24 12:07:17,572 | INFO     | did not find any defunct processes belonging to 2673282
[2025-05-24 05:07:30] 2025-05-24 12:07:17,572 | INFO     | ready for new job
[2025-05-24 05:07:30] 2025-05-24 12:07:17,573 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 05:07:30] 2025-05-24 12:07:17,574 | INFO     | **************************************
[2025-05-24 05:07:30] 2025-05-24 12:07:17,574 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 05:07:30] 2025-05-24 12:07:17,574 | INFO     | **************************************
[2025-05-24 05:07:30] 2025-05-24 12:07:17,574 | INFO     | 
[2025-05-24 05:07:30] 2025-05-24 12:07:17,576 | INFO     | architecture information:
[2025-05-24 05:07:30] 2025-05-24 12:07:17,577 | INFO     | executing command: cat /etc/os-release
[2025-05-24 05:07:30] 2025-05-24 12:07:17,590 | INFO     | cat /etc/os-release:
[2025-05-24 05:07:30] NAME="CentOS Linux"
[2025-05-24 05:07:30] VERSION="7 (Core)"
[2025-05-24 05:07:30] ID="centos"
[2025-05-24 05:07:30] ID_LIKE="rhel fedora"
[2025-05-24 05:07:30] VERSION_ID="7"
[2025-05-24 05:07:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 05:07:30] ANSI_COLOR="0;31"
[2025-05-24 05:07:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 05:07:30] HOME_URL="https://www.centos.org/"
[2025-05-24 05:07:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 05:07:30] 
[2025-05-24 05:07:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 05:07:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 05:07:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 05:07:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 05:07:30] 
[2025-05-24 05:07:30] 2025-05-24 12:07:17,590 | INFO     | **************************************
[2025-05-24 05:07:30] 2025-05-24 12:07:18,092 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-24 05:07:30] 2025-05-24 12:07:18,105 | INFO     | sufficient remaining disk space (2003214270464 B)
[2025-05-24 05:07:30] 2025-05-24 12:07:18,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 05:07:30] 2025-05-24 12:07:18,105 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 05:07:30] 2025-05-24 12:07:18,105 | INFO     | update_server=False
[2025-05-24 05:07:30] 2025-05-24 12:07:18,106 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 05:07:30] 2025-05-24 12:07:18,106 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 05:07:30] 2025-05-24 12:07:18,204 | INFO     | all data control threads have been joined
[2025-05-24 05:07:30] 2025-05-24 12:07:18,564 | INFO     | all job control threads have been joined
[2025-05-24 05:07:30] 2025-05-24 12:07:18,755 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 05:07:30] 2025-05-24 12:07:18,755 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 05:07:30] 2025-05-24 12:07:18,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 05:07:30] 2025-05-24 12:07:18,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 05:07:30] 2025-05-24 12:07:18,994 | INFO     | aborting loop
[2025-05-24 05:07:30] 2025-05-24 12:07:19,110 | INFO     | [job] retrieve thread has finished
[2025-05-24 05:07:30] 2025-05-24 12:07:19,209 | INFO     | [data] control thread has finished
[2025-05-24 05:07:30] 2025-05-24 12:07:19,215 | INFO     | all payload control threads have been joined
[2025-05-24 05:07:30] 2025-05-24 12:07:19,238 | INFO     | [payload] validate_post thread has finished
[2025-05-24 05:07:30] 2025-05-24 12:07:19,310 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 05:07:30] 2025-05-24 12:07:19,543 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 05:07:30] 2025-05-24 12:07:19,570 | INFO     | [job] control thread has finished
[2025-05-24 05:07:30] 2025-05-24 12:07:19,670 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 05:07:30] 2025-05-24 12:07:19,792 | INFO     | [payload] failed_post thread has finished
[2025-05-24 05:07:30] 2025-05-24 12:07:19,999 | INFO     | [job] job monitor thread has finished
[2025-05-24 05:07:30] 2025-05-24 12:07:20,111 | INFO     | [data] copytool_out thread has finished
[2025-05-24 05:07:30] 2025-05-24 12:07:20,221 | INFO     | [payload] control thread has finished
[2025-05-24 05:07:30] 2025-05-24 12:07:20,345 | INFO     | [job] validate thread has finished
[2025-05-24 05:07:30] 2025-05-24 12:07:20,453 | INFO     | [data] copytool_in thread has finished
[2025-05-24 05:07:30] 2025-05-24 12:07:20,494 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 05:07:30] 2025-05-24 12:07:20,603 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 05:07:30] 2025-05-24 12:07:20,924 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 05:07:30] 2025-05-24 12:07:21,929 | INFO     | [job] queue monitor thread has finished
[2025-05-24 05:07:30] 2025-05-24 12:07:23,549 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 05:07:30] 2025-05-24 12:07:24,923 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140088686712640)>', '<ExcThread(monitor, started 140088008767232)>']
[2025-05-24 05:07:30] 2025-05-24 12:07:25,790 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 05:07:30] 2025-05-24 12:07:25,790 | INFO     | [monitor] control thread has ended
[2025-05-24 05:07:30] 2025-05-24 12:07:29,948 | INFO     | all workflow threads have been joined
[2025-05-24 05:07:30] 2025-05-24 12:07:29,949 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 05:07:30] 2025-05-24 12:07:29,949 | INFO     | traces error code: 0
[2025-05-24 05:07:30] 2025-05-24 12:07:29,949 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 05:07:30] 2025-05-24 12:07:30,062 [wrapper] ==== pilot stdout END ====
[2025-05-24 05:07:30] 2025-05-24 12:07:30,064 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 05:07:30] 2025-05-24 12:07:30,066 [wrapper] pilotpid: 2666147
[2025-05-24 05:07:30] 2025-05-24 12:07:30,068 [wrapper] Pilot exit status: 0
[2025-05-24 05:07:30] 2025-05-24 12:07:30,076 [wrapper] pandaids: 6665378577
[2025-05-24 05:07:30] 2025-05-24 12:07:30,120 [wrapper] cleanup supervisor_pilot 2666153 2666148
[2025-05-24 05:07:30] 2025-05-24 12:07:30,122 [wrapper] Test setup, not cleaning
[2025-05-24 05:07:30] 2025-05-24 12:07:30,125 [wrapper] apfmon messages muted
[2025-05-24 05:07:30] 2025-05-24 12:07:30,127 [wrapper] ==== wrapper stdout END ====
[2025-05-24 05:07:30] 2025-05-24 12:07:30,129 [wrapper] ==== wrapper stderr END ====
[2025-05-24 05:07:30]  *** Error codes and diagnostics ***
[2025-05-24 05:07:30]     "exeErrorCode": 65,
[2025-05-24 05:07:30]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-24 05:07:30]     "pilotErrorCode": 1305,
[2025-05-24 05:07:30]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-24 05:07:30]  *** Listing of results directory ***
[2025-05-24 05:07:30] total 225852
[2025-05-24 05:07:30] -rw-r--r--. 1 boinc boinc    495897 May 24 02:43 pilot3.tar.gz
[2025-05-24 05:07:30] -rw-r--r--. 1 boinc boinc      5111 May 24 02:49 queuedata.json
[2025-05-24 05:07:30] -rwx------. 1 boinc boinc     37140 May 24 02:50 runpilot2-wrapper.sh
[2025-05-24 05:07:30] -rw-r--r--. 1 boinc boinc       100 May 24 05:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 05:07:30] -rwxr-xr-x. 1 boinc boinc      7986 May 24 05:04 run_atlas
[2025-05-24 05:07:30] -rw-r--r--. 1 boinc boinc       105 May 24 05:04 job.xml
[2025-05-24 05:07:30] -rw-r--r--. 1 boinc boinc      6601 May 24 05:04 init_data.xml
[2025-05-24 05:07:30] -rw-r--r--. 2 boinc boinc 227257655 May 24 05:04 EVNT.44871834._000587.pool.root.1
[2025-05-24 05:07:30] -rw-r--r--. 2 boinc boinc     15093 May 24 05:04 start_atlas.sh
[2025-05-24 05:07:30] drwxrwx--x. 2 boinc boinc      4096 May 24 05:04 shared
[2025-05-24 05:07:30] -rw-r--r--. 2 boinc boinc    508876 May 24 05:04 input.tar.gz
[2025-05-24 05:07:30] -rw-r--r--. 1 boinc boinc         0 May 24 05:04 boinc_lockfile
[2025-05-24 05:07:30] -rw-r--r--. 1 boinc boinc      2558 May 24 05:04 pandaJob.out
[2025-05-24 05:07:30] -rw-------. 1 boinc boinc    988564 May 24 05:04 agis_schedconf.cvmfs.json
[2025-05-24 05:07:30] -rw-------. 1 boinc boinc   1596740 May 24 05:04 agis_ddmendpoints.agis.ALL.json
[2025-05-24 05:07:30] drwx------. 4 boinc boinc      4096 May 24 05:04 pilot3
[2025-05-24 05:07:30] -rw-------. 1 boinc boinc       971 May 24 05:05 memory_monitor_summary.json
[2025-05-24 05:07:30] -rw-------. 1 boinc boinc     20239 May 24 05:05 log.44871837._014676.job.log.tgz.1
[2025-05-24 05:07:30] -rw-------. 1 boinc boinc        95 May 24 05:06 pilot_heartbeat.json
[2025-05-24 05:07:30] -rw-------. 1 boinc boinc      8342 May 24 05:07 heartbeat.json
[2025-05-24 05:07:30] -rw-r--r--. 1 boinc boinc       524 May 24 05:07 boinc_task_state.xml
[2025-05-24 05:07:30] -rw-r--r--. 1 boinc boinc      8192 May 24 05:07 boinc_mmap_file
[2025-05-24 05:07:30] -rw-r--r--. 1 boinc boinc        22 May 24 05:07 wrapper_checkpoint.txt
[2025-05-24 05:07:30] -rw-------. 1 boinc boinc      4352 May 24 05:07 pilotlog.txt
[2025-05-24 05:07:30] -rw-------. 1 boinc boinc     72736 May 24 05:07 log.44871837._014676.job.log.1
[2025-05-24 05:07:30] -rw-------. 1 boinc boinc       188 May 24 05:07 output.list
[2025-05-24 05:07:30] -rw-r--r--. 1 boinc boinc       620 May 24 05:07 runtime_log
[2025-05-24 05:07:30] -rw-------. 1 boinc boinc    112640 May 24 05:07 result.tar.gz
[2025-05-24 05:07:30] -rw-------. 1 boinc boinc       644 May 24 05:07 TEfKDmRh0c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmd0QKDmYbwRon.diag
[2025-05-24 05:07:30] -rw-r--r--. 1 boinc boinc      8484 May 24 05:07 runtime_log.err
[2025-05-24 05:07:30] -rw-r--r--. 1 boinc boinc     21448 May 24 05:07 stderr.txt
[2025-05-24 05:07:30] No HITS result produced
[2025-05-24 05:07:30]  *** Contents of shared directory: ***
[2025-05-24 05:07:30] total 222564
[2025-05-24 05:07:30] -rw-r--r--. 2 boinc boinc 227257655 May 24 05:04 ATLAS.root_0
[2025-05-24 05:07:30] -rw-r--r--. 2 boinc boinc     15093 May 24 05:04 start_atlas.sh
[2025-05-24 05:07:30] -rw-r--r--. 2 boinc boinc    508876 May 24 05:04 input.tar.gz
[2025-05-24 05:07:30] -rw-------. 1 boinc boinc    112640 May 24 05:07 result.tar.gz
05:07:31 (2660703): run_atlas exited; CPU time 18.685541
05:07:31 (2660703): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN