Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:26:54 (3202566): wrapper (7.7.26015): starting
08:26:54 (3202566): wrapper: running run_atlas (--nthreads 12)
[2025-05-24 08:26:54] Arguments: --nthreads 12
[2025-05-24 08:26:54] Threads: 12
[2025-05-24 08:26:54] Checking for CVMFS
[2025-05-24 08:26:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 08:26:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 08:26:55] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 08:26:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 08:26:56] 2.11.5.0 3774530 17473 233608 146372 2 63 42243308 45568000 11347 130560 0 166112207 99.762 122957643 14343 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-24 08:26:56] CVMFS is ok
[2025-05-24 08:26:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 08:26:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 08:26:56] Further information can be found at the LHC@home message board.
[2025-05-24 08:26:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 08:26:56] Checking for apptainer binary...
[2025-05-24 08:26:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 08:26:56] Running /usr/bin/apptainer --version
[2025-05-24 08:26:56] apptainer version 1.4.0-1.el9
[2025-05-24 08:26:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 08:26:57] wns0055.triumf.lcg
[2025-05-24 08:26:57] apptainer works
[2025-05-24 08:26:57] Set ATHENA_PROC_NUMBER=12
[2025-05-24 08:26:57] Set ATHENA_CORE_NUMBER=12
[2025-05-24 08:26:57] Starting ATLAS job with PandaID=6665378489
[2025-05-24 08:26:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 08:32:02]  *** The last 200 lines of the pilot log: ***
[2025-05-24 08:32:02] 2025-05-24 15:31:48,841 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 08:32:02] 2025-05-24 15:31:48,841 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 08:32:02] 2025-05-24 15:31:48,841 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 08:32:02] 2025-05-24 15:31:48,841 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | WARNING  | wrong length of table data, x=[1748100537.0], y=[2152.0] (must be same and length>=4)
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | ..............................
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . Timing measurements:
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . get job = 0 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . initial setup = 3 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . payload setup = 24 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . stage-in = 0 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . payload execution = 59 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . stage-out = 0 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . log creation = 0 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | ..............................
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665378489/pilotlog.txt
[2025-05-24 08:32:02] 2025-05-24 15:31:48,945 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-24 08:32:02] - Log from pilotlog.txt -
[2025-05-24 08:32:02] 2025-05-24 15:31:48,838 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-24 08:32:02] 2025-05-24 15:31:48,838 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6665378489/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 08:32:02] 2025-05-24 15:31:48,841 | INFO     | extracted standard info from prmon json
[2025-05-24 08:32:02] 2025-05-24 15:31:48,841 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 08:32:02] 2025-05-24 15:31:48,841 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 08:32:02] 2025-05-24 15:31:48,841 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 08:32:02] 2025-05-24 15:31:48,841 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | WARNING  | wrong length of table data, x=[1748100537.0], y=[2152.0] (must be same and length>=4)
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | ..............................
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . Timing measurements:
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . get job = 0 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . initial setup = 3 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . payload setup = 24 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . stage-in = 0 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . payload execution = 59 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . stage-out = 0 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . log creation = 0 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | ..............................
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665378489/pilotlog.txt
[2025-05-24 08:32:02] 2025-05-24 15:31:48,945 | WARNING  | 
[2025-05-24 08:32:02] [begin log extracts]
[2025-05-24 08:32:02] - Log from pilotlog.txt -
[2025-05-24 08:32:02] 2025-05-24 15:31:48,838 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-24 08:32:02] 2025-05-24 15:31:48,838 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6665378489/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 08:32:02] 2025-05-24 15:31:48,841 | INFO     | extracted standard info from prmon json
[2025-05-24 08:32:02] 2025-05-24 15:31:48,841 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 08:32:02] 2025-05-24 15:31:48,841 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 08:32:02] 2025-05-24 15:31:48,841 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 08:32:02] 2025-05-24 15:31:48,841 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | WARNING  | wrong length of table data, x=[1748100537.0], y=[2152.0] (must be same and length>=4)
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | ..............................
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . Timing measurements:
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . get job = 0 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . initial setup = 3 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . payload setup = 24 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . stage-in = 0 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . payload execution = 59 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . stage-out = 0 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | . log creation = 0 s
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | ..............................
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 08:32:02] 2025-05-24 15:31:48,842 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665378489/pilotlog.txt
[2025-05-24 08:32:02] [end log extracts]
[2025-05-24 08:32:02] 2025-05-24 15:31:48,945 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-24 08:32:02] 2025-05-24 15:31:48,946 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-24 08:32:02] 2025-05-24 15:31:49,039 | INFO     | 
[2025-05-24 08:32:02] 2025-05-24 15:31:49,039 | INFO     | job summary report
[2025-05-24 08:32:02] 2025-05-24 15:31:49,039 | INFO     | --------------------------------------------------
[2025-05-24 08:32:02] 2025-05-24 15:31:49,039 | INFO     | PanDA job id: 6665378489
[2025-05-24 08:32:02] 2025-05-24 15:31:49,039 | INFO     | task id: 44871837
[2025-05-24 08:32:02] 2025-05-24 15:31:49,039 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-24 08:29:23,070 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-24 08:32:02] 2025-05-24 15:31:49,039 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 08:32:02] 2025-05-24 15:31:49,039 | INFO     | pilot state: failed 
[2025-05-24 08:32:02] 2025-05-24 15:31:49,039 | INFO     | transexitcode: 65
[2025-05-24 08:32:02] 2025-05-24 15:31:49,039 | INFO     | exeerrorcode: 65
[2025-05-24 08:32:02] 2025-05-24 15:31:49,039 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-24 08:32:02] 2025-05-24 15:31:49,039 | INFO     | exitcode: 65
[2025-05-24 08:32:02] 2025-05-24 15:31:49,039 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-24 08:32:02] 2025-05-24 15:31:49,039 | INFO     | cpuconsumptiontime: 16 s
[2025-05-24 08:32:02] 2025-05-24 15:31:49,039 | INFO     | nevents: 0
[2025-05-24 08:32:02] 2025-05-24 15:31:49,039 | INFO     | neventsw: 0
[2025-05-24 08:32:02] 2025-05-24 15:31:49,039 | INFO     | pid: 3213856
[2025-05-24 08:32:02] 2025-05-24 15:31:49,039 | INFO     | pgrp: 3213856
[2025-05-24 08:32:02] 2025-05-24 15:31:49,040 | INFO     | corecount: 12
[2025-05-24 08:32:02] 2025-05-24 15:31:49,040 | INFO     | event service: False
[2025-05-24 08:32:02] 2025-05-24 15:31:49,040 | INFO     | sizes: {0: 2393736, 11: 2393736, 19: 2393970, 22: 2393998, 88: 2417270, 89: 2421661, 224: 2421775}
[2025-05-24 08:32:02] 2025-05-24 15:31:49,040 | INFO     | --------------------------------------------------
[2025-05-24 08:32:02] 2025-05-24 15:31:49,040 | INFO     | 
[2025-05-24 08:32:02] 2025-05-24 15:31:49,040 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-24 08:32:02] 2025-05-24 15:31:49,056 | INFO     | PID=3206156 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-24 08:32:02] 2025-05-24 15:31:49,057 | INFO     | .. there are 35 such processes running
[2025-05-24 08:32:02] 2025-05-24 15:31:49,060 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 08:32:02] 2025-05-24 15:31:49,060 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 08:32:02] 2025-05-24 15:31:49,061 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 08:32:02] 2025-05-24 15:31:49,061 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 08:32:02] 2025-05-24 15:31:49,061 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 08:32:02] 2025-05-24 15:31:49,061 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 08:32:02] 2025-05-24 15:31:49,061 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 08:32:02] 2025-05-24 15:31:49,061 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 08:32:02] 2025-05-24 15:31:49,061 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 08:32:02] 2025-05-24 15:31:49,061 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 08:32:02] 2025-05-24 15:31:49,061 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 08:32:02] 2025-05-24 15:31:49,061 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 08:32:02] 2025-05-24 15:31:49,061 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 08:32:02] 2025-05-24 15:31:49,061 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 08:32:02] 2025-05-24 15:31:49,061 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 08:32:02] 2025-05-24 15:31:49,061 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 08:32:02] 2025-05-24 15:31:49,061 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 08:32:02] 2025-05-24 15:31:49,061 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 08:32:02] 2025-05-24 15:31:49,061 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 08:32:02] 2025-05-24 15:31:49,061 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 08:32:02] 2025-05-24 15:31:49,062 | INFO     | job 6665378489 has completed (purged errors)
[2025-05-24 08:32:02] 2025-05-24 15:31:49,062 | INFO     | overall cleanup function is called
[2025-05-24 08:32:02] 2025-05-24 15:31:50,061 | INFO     | 258s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-24 08:32:02] 2025-05-24 15:31:50,068 | INFO     | --- collectZombieJob: --- 10, [3213856]
[2025-05-24 08:32:02] 2025-05-24 15:31:50,068 | INFO     | zombie collector waiting for pid 3213856
[2025-05-24 08:32:02] 2025-05-24 15:31:50,068 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 08:32:02] 2025-05-24 15:31:50,068 | INFO     | collected zombie processes
[2025-05-24 08:32:02] 2025-05-24 15:31:50,068 | INFO     | will attempt to kill all subprocesses of pid=3213856
[2025-05-24 08:32:02] 2025-05-24 15:31:50,264 | INFO     | process IDs to be killed: [3213856] (in reverse order)
[2025-05-24 08:32:02] 2025-05-24 15:31:50,341 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 08:32:02] 2025-05-24 15:31:50,341 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 08:32:02] 2025-05-24 15:31:50,364 | INFO     | did not find any defunct processes belonging to 3213856
[2025-05-24 08:32:02] 2025-05-24 15:31:50,390 | INFO     | did not find any defunct processes belonging to 3213856
[2025-05-24 08:32:02] 2025-05-24 15:31:50,390 | INFO     | ready for new job
[2025-05-24 08:32:02] 2025-05-24 15:31:50,390 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 08:32:02] 2025-05-24 15:31:50,391 | INFO     | **************************************
[2025-05-24 08:32:02] 2025-05-24 15:31:50,391 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 08:32:02] 2025-05-24 15:31:50,391 | INFO     | **************************************
[2025-05-24 08:32:02] 2025-05-24 15:31:50,391 | INFO     | 
[2025-05-24 08:32:02] 2025-05-24 15:31:50,401 | INFO     | architecture information:
[2025-05-24 08:32:02] 2025-05-24 15:31:50,406 | INFO     | executing command: cat /etc/os-release
[2025-05-24 08:32:02] 2025-05-24 15:31:50,459 | INFO     | cat /etc/os-release:
[2025-05-24 08:32:02] NAME="CentOS Linux"
[2025-05-24 08:32:02] VERSION="7 (Core)"
[2025-05-24 08:32:02] ID="centos"
[2025-05-24 08:32:02] ID_LIKE="rhel fedora"
[2025-05-24 08:32:02] VERSION_ID="7"
[2025-05-24 08:32:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 08:32:02] ANSI_COLOR="0;31"
[2025-05-24 08:32:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 08:32:02] HOME_URL="https://www.centos.org/"
[2025-05-24 08:32:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 08:32:02] 
[2025-05-24 08:32:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 08:32:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 08:32:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 08:32:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 08:32:02] 
[2025-05-24 08:32:02] 2025-05-24 15:31:50,459 | INFO     | **************************************
[2025-05-24 08:32:02] 2025-05-24 15:31:50,962 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-24 08:32:02] 2025-05-24 15:31:50,994 | INFO     | sufficient remaining disk space (2096905584640 B)
[2025-05-24 08:32:02] 2025-05-24 15:31:50,994 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 08:32:02] 2025-05-24 15:31:50,995 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 08:32:02] 2025-05-24 15:31:50,995 | INFO     | update_server=False
[2025-05-24 08:32:02] 2025-05-24 15:31:50,995 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 08:32:02] 2025-05-24 15:31:50,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 08:32:02] 2025-05-24 15:31:50,996 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 08:32:02] 2025-05-24 15:31:51,000 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 08:32:02] 2025-05-24 15:31:51,000 | INFO     | aborting loop
[2025-05-24 08:32:02] 2025-05-24 15:31:51,026 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 08:32:02] 2025-05-24 15:31:51,071 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 08:32:02] 2025-05-24 15:31:51,071 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 08:32:02] 2025-05-24 15:31:51,071 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 08:32:02] 2025-05-24 15:31:51,211 | INFO     | all payload control threads have been joined
[2025-05-24 08:32:02] 2025-05-24 15:31:51,674 | INFO     | all data control threads have been joined
[2025-05-24 08:32:02] 2025-05-24 15:31:52,001 | INFO     | [job] retrieve thread has finished
[2025-05-24 08:32:02] 2025-05-24 15:31:52,002 | INFO     | [job] queue monitor thread has finished
[2025-05-24 08:32:02] 2025-05-24 15:31:52,006 | INFO     | [job] job monitor thread has finished
[2025-05-24 08:32:02] 2025-05-24 15:31:52,169 | INFO     | [job] validate thread has finished
[2025-05-24 08:32:02] 2025-05-24 15:31:52,192 | INFO     | [payload] failed_post thread has finished
[2025-05-24 08:32:02] 2025-05-24 15:31:52,217 | INFO     | [payload] control thread has finished
[2025-05-24 08:32:02] 2025-05-24 15:31:52,269 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 08:32:02] 2025-05-24 15:31:52,270 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 08:32:02] 2025-05-24 15:31:52,311 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 08:32:02] 2025-05-24 15:31:52,623 | INFO     | [payload] validate_post thread has finished
[2025-05-24 08:32:02] 2025-05-24 15:31:52,629 | INFO     | all job control threads have been joined
[2025-05-24 08:32:02] 2025-05-24 15:31:52,680 | INFO     | [data] control thread has finished
[2025-05-24 08:32:02] 2025-05-24 15:31:52,699 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 08:32:02] 2025-05-24 15:31:53,003 | INFO     | [data] copytool_out thread has finished
[2025-05-24 08:32:02] 2025-05-24 15:31:53,175 | INFO     | [data] copytool_in thread has finished
[2025-05-24 08:32:02] 2025-05-24 15:31:53,635 | INFO     | [job] control thread has finished
[2025-05-24 08:32:02] 2025-05-24 15:31:55,035 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 08:32:02] 2025-05-24 15:31:56,855 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140154853906240)>', '<ExcThread(monitor, started 140154152929024)>']
[2025-05-24 08:32:02] 2025-05-24 15:31:57,130 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 08:32:02] 2025-05-24 15:31:57,130 | INFO     | [monitor] control thread has ended
[2025-05-24 08:32:02] 2025-05-24 15:32:01,881 | INFO     | all workflow threads have been joined
[2025-05-24 08:32:02] 2025-05-24 15:32:01,881 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 08:32:02] 2025-05-24 15:32:01,881 | INFO     | traces error code: 0
[2025-05-24 08:32:02] 2025-05-24 15:32:01,881 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 08:32:02] 2025-05-24 15:32:02,093 [wrapper] ==== pilot stdout END ====
[2025-05-24 08:32:02] 2025-05-24 15:32:02,095 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 08:32:02] 2025-05-24 15:32:02,096 [wrapper] pilotpid: 3206156
[2025-05-24 08:32:02] 2025-05-24 15:32:02,098 [wrapper] Pilot exit status: 0
[2025-05-24 08:32:02] 2025-05-24 15:32:02,147 [wrapper] pandaids: 6665378489
[2025-05-24 08:32:02] 2025-05-24 15:32:02,194 [wrapper] cleanup supervisor_pilot 3206162 3206157
[2025-05-24 08:32:02] 2025-05-24 15:32:02,196 [wrapper] Test setup, not cleaning
[2025-05-24 08:32:02] 2025-05-24 15:32:02,198 [wrapper] apfmon messages muted
[2025-05-24 08:32:02] 2025-05-24 15:32:02,200 [wrapper] ==== wrapper stdout END ====
[2025-05-24 08:32:02] 2025-05-24 15:32:02,201 [wrapper] ==== wrapper stderr END ====
[2025-05-24 08:32:02]  *** Error codes and diagnostics ***
[2025-05-24 08:32:02]     "exeErrorCode": 65,
[2025-05-24 08:32:02]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-24 08:32:02]     "pilotErrorCode": 1305,
[2025-05-24 08:32:02]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-24 08:32:02]  *** Listing of results directory ***
[2025-05-24 08:32:02] total 221572
[2025-05-24 08:32:02] -rw-r--r--. 1 boinc boinc    495897 May 24 02:43 pilot3.tar.gz
[2025-05-24 08:32:02] -rw-r--r--. 1 boinc boinc      5111 May 24 02:46 queuedata.json
[2025-05-24 08:32:02] -rwx------. 1 boinc boinc     37140 May 24 02:46 runpilot2-wrapper.sh
[2025-05-24 08:32:02] -rw-r--r--. 1 boinc boinc       100 May 24 08:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 08:32:02] -rwxr-xr-x. 1 boinc boinc      7986 May 24 08:26 run_atlas
[2025-05-24 08:32:02] -rw-r--r--. 1 boinc boinc       105 May 24 08:26 job.xml
[2025-05-24 08:32:02] -rw-r--r--. 2 boinc boinc 222851640 May 24 08:26 EVNT.44871834._000584.pool.root.1
[2025-05-24 08:32:02] -rw-r--r--. 1 boinc boinc      6601 May 24 08:26 init_data.xml
[2025-05-24 08:32:02] -rw-r--r--. 2 boinc boinc     15093 May 24 08:26 start_atlas.sh
[2025-05-24 08:32:02] drwxrwx--x. 2 boinc boinc      4096 May 24 08:26 shared
[2025-05-24 08:32:02] -rw-r--r--. 2 boinc boinc    508873 May 24 08:26 input.tar.gz
[2025-05-24 08:32:02] -rw-r--r--. 1 boinc boinc         0 May 24 08:26 boinc_lockfile
[2025-05-24 08:32:02] -rw-r--r--. 1 boinc boinc      2558 May 24 08:26 pandaJob.out
[2025-05-24 08:32:02] -rw-------. 1 boinc boinc    988548 May 24 08:27 agis_schedconf.cvmfs.json
[2025-05-24 08:32:02] -rw-------. 1 boinc boinc   1596740 May 24 08:27 agis_ddmendpoints.agis.ALL.json
[2025-05-24 08:32:02] drwx------. 4 boinc boinc      4096 May 24 08:27 pilot3
[2025-05-24 08:32:02] -rw-------. 1 boinc boinc       973 May 24 08:29 memory_monitor_summary.json
[2025-05-24 08:32:02] -rw-r--r--. 1 boinc boinc       524 May 24 08:29 boinc_task_state.xml
[2025-05-24 08:32:02] -rw-------. 1 boinc boinc     20782 May 24 08:29 log.44871837._014588.job.log.tgz.1
[2025-05-24 08:32:02] -rw-r--r--. 1 boinc boinc        22 May 24 08:31 wrapper_checkpoint.txt
[2025-05-24 08:32:02] -rw-r--r--. 1 boinc boinc      8192 May 24 08:31 boinc_mmap_file
[2025-05-24 08:32:02] -rw-------. 1 boinc boinc        95 May 24 08:31 pilot_heartbeat.json
[2025-05-24 08:32:02] -rw-------. 1 boinc boinc      8350 May 24 08:31 heartbeat.json
[2025-05-24 08:32:02] -rw-------. 1 boinc boinc      4352 May 24 08:32 pilotlog.txt
[2025-05-24 08:32:02] -rw-------. 1 boinc boinc     80059 May 24 08:32 log.44871837._014588.job.log.1
[2025-05-24 08:32:02] -rw-------. 1 boinc boinc       188 May 24 08:32 output.list
[2025-05-24 08:32:02] -rw-r--r--. 1 boinc boinc       620 May 24 08:32 runtime_log
[2025-05-24 08:32:02] -rw-------. 1 boinc boinc    122880 May 24 08:32 result.tar.gz
[2025-05-24 08:32:02] -rw-r--r--. 1 boinc boinc      8484 May 24 08:32 runtime_log.err
[2025-05-24 08:32:02] -rw-------. 1 boinc boinc       647 May 24 08:32 mLhLDmwd0c7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhVMKDmnPOLGn.diag
[2025-05-24 08:32:02] -rw-r--r--. 1 boinc boinc     21732 May 24 08:32 stderr.txt
[2025-05-24 08:32:02] No HITS result produced
[2025-05-24 08:32:02]  *** Contents of shared directory: ***
[2025-05-24 08:32:02] total 218272
[2025-05-24 08:32:02] -rw-r--r--. 2 boinc boinc 222851640 May 24 08:26 ATLAS.root_0
[2025-05-24 08:32:02] -rw-r--r--. 2 boinc boinc     15093 May 24 08:26 start_atlas.sh
[2025-05-24 08:32:02] -rw-r--r--. 2 boinc boinc    508873 May 24 08:26 input.tar.gz
[2025-05-24 08:32:02] -rw-------. 1 boinc boinc    122880 May 24 08:32 result.tar.gz
08:32:04 (3202566): run_atlas exited; CPU time 26.646562
08:32:04 (3202566): called boinc_finish(0)

</stderr_txt>
]]>

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