Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:45:37 (1560892): wrapper (7.7.26015): starting
04:45:37 (1560892): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 04:45:37] Arguments: --nthreads 8
[2025-05-24 04:45:37] Threads: 8
[2025-05-24 04:45:37] Checking for CVMFS
[2025-05-24 04:45:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 04:45:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 04:45:37] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 04:45:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 04:45:38] 2.11.3.0 22580 386703 234896 146366 1 195 43406692 45568001 10630 130560 0 1772179175 99.744 1525187332 20890 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-05-24 04:45:38] CVMFS is ok
[2025-05-24 04:45:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 04:45:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 04:45:38] Further information can be found at the LHC@home message board.
[2025-05-24 04:45:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 04:45:38] Checking for apptainer binary...
[2025-05-24 04:45:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 04:45:38] Running /usr/bin/apptainer --version
[2025-05-24 04:45:38] apptainer version 1.3.3-1.el9
[2025-05-24 04:45:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 04:45:38] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0021.triumf.lcg
[2025-05-24 04:45:38] apptainer works
[2025-05-24 04:45:38] Set ATHENA_PROC_NUMBER=8
[2025-05-24 04:45:38] Set ATHENA_CORE_NUMBER=8
[2025-05-24 04:45:38] Starting ATLAS job with PandaID=6665377863
[2025-05-24 04:45:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 04:50:43]  *** The last 200 lines of the pilot log: ***
[2025-05-24 04:50:43] 2025-05-24 11:50:24,694 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 04:50:43] 2025-05-24 11:50:24,695 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 04:50:43] 2025-05-24 11:50:24,695 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 04:50:43] 2025-05-24 11:50:24,695 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 04:50:43] 2025-05-24 11:50:24,696 | WARNING  | wrong length of table data, x=[1748087258.0], y=[1217.0] (must be same and length>=4)
[2025-05-24 04:50:43] 2025-05-24 11:50:24,696 | INFO     | ..............................
[2025-05-24 04:50:43] 2025-05-24 11:50:24,696 | INFO     | . Timing measurements:
[2025-05-24 04:50:43] 2025-05-24 11:50:24,696 | INFO     | . get job = 0 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,696 | INFO     | . initial setup = 6 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | . payload setup = 29 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | . stage-in = 0 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | . payload execution = 47 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | . stage-out = 0 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | . log creation = 0 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | ..............................
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 04:50:43] 2025-05-24 11:50:24,737 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665377863/pilotlog.txt
[2025-05-24 04:50:43] 2025-05-24 11:50:24,838 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-24 04:50:43] - Log from pilotlog.txt -
[2025-05-24 04:50:43] 2025-05-24 11:50:24,693 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-24 04:50:43] 2025-05-24 11:50:24,694 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6665377863/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 04:50:43] 2025-05-24 11:50:24,694 | INFO     | extracted standard info from prmon json
[2025-05-24 04:50:43] 2025-05-24 11:50:24,694 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 04:50:43] 2025-05-24 11:50:24,695 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 04:50:43] 2025-05-24 11:50:24,695 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 04:50:43] 2025-05-24 11:50:24,695 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 04:50:43] 2025-05-24 11:50:24,696 | WARNING  | wrong length of table data, x=[1748087258.0], y=[1217.0] (must be same and length>=4)
[2025-05-24 04:50:43] 2025-05-24 11:50:24,696 | INFO     | ..............................
[2025-05-24 04:50:43] 2025-05-24 11:50:24,696 | INFO     | . Timing measurements:
[2025-05-24 04:50:43] 2025-05-24 11:50:24,696 | INFO     | . get job = 0 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,696 | INFO     | . initial setup = 6 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | . payload setup = 29 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | . stage-in = 0 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | . payload execution = 47 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | . stage-out = 0 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | . log creation = 0 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | ..............................
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 04:50:43] 2025-05-24 11:50:24,737 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665377863/pilotlog.txt
[2025-05-24 04:50:43] 2025-05-24 11:50:24,838 | WARNING  | 
[2025-05-24 04:50:43] [begin log extracts]
[2025-05-24 04:50:43] - Log from pilotlog.txt -
[2025-05-24 04:50:43] 2025-05-24 11:50:24,693 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-24 04:50:43] 2025-05-24 11:50:24,694 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6665377863/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 04:50:43] 2025-05-24 11:50:24,694 | INFO     | extracted standard info from prmon json
[2025-05-24 04:50:43] 2025-05-24 11:50:24,694 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 04:50:43] 2025-05-24 11:50:24,695 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 04:50:43] 2025-05-24 11:50:24,695 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 04:50:43] 2025-05-24 11:50:24,695 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 04:50:43] 2025-05-24 11:50:24,696 | WARNING  | wrong length of table data, x=[1748087258.0], y=[1217.0] (must be same and length>=4)
[2025-05-24 04:50:43] 2025-05-24 11:50:24,696 | INFO     | ..............................
[2025-05-24 04:50:43] 2025-05-24 11:50:24,696 | INFO     | . Timing measurements:
[2025-05-24 04:50:43] 2025-05-24 11:50:24,696 | INFO     | . get job = 0 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,696 | INFO     | . initial setup = 6 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | . payload setup = 29 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | . stage-in = 0 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | . payload execution = 47 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | . stage-out = 0 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | . log creation = 0 s
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | ..............................
[2025-05-24 04:50:43] 2025-05-24 11:50:24,697 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 04:50:43] 2025-05-24 11:50:24,737 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665377863/pilotlog.txt
[2025-05-24 04:50:43] [end log extracts]
[2025-05-24 04:50:43] 2025-05-24 11:50:24,839 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-24 04:50:43] 2025-05-24 11:50:24,840 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-24 04:50:43] 2025-05-24 11:50:25,477 | INFO     | 
[2025-05-24 04:50:43] 2025-05-24 11:50:25,477 | INFO     | job summary report
[2025-05-24 04:50:43] 2025-05-24 11:50:25,477 | INFO     | --------------------------------------------------
[2025-05-24 04:50:43] 2025-05-24 11:50:25,477 | INFO     | PanDA job id: 6665377863
[2025-05-24 04:50:43] 2025-05-24 11:50:25,477 | INFO     | task id: 44871837
[2025-05-24 04:50:43] 2025-05-24 11:50:25,477 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-24 04:48:00,000 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-24 04:50:43] 2025-05-24 11:50:25,477 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 04:50:43] 2025-05-24 11:50:25,477 | INFO     | pilot state: failed 
[2025-05-24 04:50:43] 2025-05-24 11:50:25,477 | INFO     | transexitcode: 65
[2025-05-24 04:50:43] 2025-05-24 11:50:25,478 | INFO     | exeerrorcode: 65
[2025-05-24 04:50:43] 2025-05-24 11:50:25,478 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-24 04:50:43] 2025-05-24 11:50:25,478 | INFO     | exitcode: 65
[2025-05-24 04:50:43] 2025-05-24 11:50:25,478 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-24 04:50:43] 2025-05-24 11:50:25,478 | INFO     | cpuconsumptiontime: 16 s
[2025-05-24 04:50:43] 2025-05-24 11:50:25,478 | INFO     | nevents: 0
[2025-05-24 04:50:43] 2025-05-24 11:50:25,478 | INFO     | neventsw: 0
[2025-05-24 04:50:43] 2025-05-24 11:50:25,478 | INFO     | pid: 1573168
[2025-05-24 04:50:43] 2025-05-24 11:50:25,478 | INFO     | pgrp: 1573168
[2025-05-24 04:50:43] 2025-05-24 11:50:25,478 | INFO     | corecount: 8
[2025-05-24 04:50:43] 2025-05-24 11:50:25,478 | INFO     | event service: False
[2025-05-24 04:50:43] 2025-05-24 11:50:25,478 | INFO     | sizes: {0: 2393565, 1: 2393764, 2: 2393764, 13: 2393792, 16: 2394054, 24: 2394082, 80: 2417337, 83: 2421572, 85: 2421628, 215: 2421770}
[2025-05-24 04:50:43] 2025-05-24 11:50:25,478 | INFO     | --------------------------------------------------
[2025-05-24 04:50:43] 2025-05-24 11:50:25,478 | INFO     | 
[2025-05-24 04:50:43] 2025-05-24 11:50:25,479 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-24 04:50:43] 2025-05-24 11:50:25,494 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 04:50:43] 2025-05-24 11:50:25,495 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 04:50:43] 2025-05-24 11:50:25,495 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 04:50:43] 2025-05-24 11:50:25,495 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 04:50:43] 2025-05-24 11:50:25,495 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 04:50:43] 2025-05-24 11:50:25,495 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 04:50:43] 2025-05-24 11:50:25,495 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 04:50:43] 2025-05-24 11:50:25,495 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 04:50:43] 2025-05-24 11:50:25,495 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 04:50:43] 2025-05-24 11:50:25,495 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 04:50:43] 2025-05-24 11:50:25,495 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 04:50:43] 2025-05-24 11:50:25,495 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 04:50:43] 2025-05-24 11:50:25,495 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 04:50:43] 2025-05-24 11:50:25,495 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 04:50:43] 2025-05-24 11:50:25,496 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 04:50:43] 2025-05-24 11:50:25,496 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 04:50:43] 2025-05-24 11:50:25,496 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 04:50:43] 2025-05-24 11:50:25,496 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 04:50:43] 2025-05-24 11:50:25,496 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 04:50:43] 2025-05-24 11:50:25,496 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 04:50:43] 2025-05-24 11:50:25,496 | INFO     | job 6665377863 has completed (purged errors)
[2025-05-24 04:50:43] 2025-05-24 11:50:25,496 | INFO     | overall cleanup function is called
[2025-05-24 04:50:43] 2025-05-24 11:50:26,537 | INFO     | --- collectZombieJob: --- 10, [1573168]
[2025-05-24 04:50:43] 2025-05-24 11:50:26,537 | INFO     | zombie collector waiting for pid 1573168
[2025-05-24 04:50:43] 2025-05-24 11:50:26,537 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 04:50:43] 2025-05-24 11:50:26,537 | INFO     | collected zombie processes
[2025-05-24 04:50:43] 2025-05-24 11:50:26,538 | INFO     | will attempt to kill all subprocesses of pid=1573168
[2025-05-24 04:50:43] 2025-05-24 11:50:27,492 | INFO     | PID=1564541 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-24 04:50:43] 2025-05-24 11:50:27,492 | INFO     | .. there are 26 such processes running
[2025-05-24 04:50:43] 2025-05-24 11:50:27,559 | INFO     | process IDs to be killed: [1573168] (in reverse order)
[2025-05-24 04:50:43] 2025-05-24 11:50:27,704 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 04:50:43] 2025-05-24 11:50:27,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 04:50:43] 2025-05-24 11:50:27,718 | INFO     | did not find any defunct processes belonging to 1573168
[2025-05-24 04:50:43] 2025-05-24 11:50:27,728 | INFO     | did not find any defunct processes belonging to 1573168
[2025-05-24 04:50:43] 2025-05-24 11:50:27,728 | INFO     | ready for new job
[2025-05-24 04:50:43] 2025-05-24 11:50:27,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 04:50:43] 2025-05-24 11:50:27,733 | INFO     | **************************************
[2025-05-24 04:50:43] 2025-05-24 11:50:27,733 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 04:50:43] 2025-05-24 11:50:27,733 | INFO     | **************************************
[2025-05-24 04:50:43] 2025-05-24 11:50:27,733 | INFO     | 
[2025-05-24 04:50:43] 2025-05-24 11:50:27,749 | INFO     | architecture information:
[2025-05-24 04:50:43] 2025-05-24 11:50:27,750 | INFO     | executing command: cat /etc/os-release
[2025-05-24 04:50:43] 2025-05-24 11:50:27,858 | INFO     | cat /etc/os-release:
[2025-05-24 04:50:43] NAME="CentOS Linux"
[2025-05-24 04:50:43] VERSION="7 (Core)"
[2025-05-24 04:50:43] ID="centos"
[2025-05-24 04:50:43] ID_LIKE="rhel fedora"
[2025-05-24 04:50:43] VERSION_ID="7"
[2025-05-24 04:50:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 04:50:43] ANSI_COLOR="0;31"
[2025-05-24 04:50:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 04:50:43] HOME_URL="https://www.centos.org/"
[2025-05-24 04:50:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 04:50:43] 
[2025-05-24 04:50:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 04:50:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 04:50:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 04:50:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 04:50:43] 
[2025-05-24 04:50:43] 2025-05-24 11:50:27,858 | INFO     | **************************************
[2025-05-24 04:50:43] 2025-05-24 11:50:28,364 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-24 04:50:43] 2025-05-24 11:50:28,493 | INFO     | 264s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-24 04:50:43] 2025-05-24 11:50:28,662 | INFO     | sufficient remaining disk space (1343974539264 B)
[2025-05-24 04:50:43] 2025-05-24 11:50:28,662 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 04:50:43] 2025-05-24 11:50:28,662 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 04:50:43] 2025-05-24 11:50:28,662 | INFO     | update_server=False
[2025-05-24 04:50:43] 2025-05-24 11:50:28,662 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 04:50:43] 2025-05-24 11:50:28,663 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 04:50:43] 2025-05-24 11:50:28,663 | INFO     | aborting loop
[2025-05-24 04:50:43] 2025-05-24 11:50:28,666 | INFO     | all payload control threads have been joined
[2025-05-24 04:50:43] 2025-05-24 11:50:28,684 | INFO     | all data control threads have been joined
[2025-05-24 04:50:43] 2025-05-24 11:50:29,008 | INFO     | all job control threads have been joined
[2025-05-24 04:50:43] 2025-05-24 11:50:29,245 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 04:50:43] 2025-05-24 11:50:29,499 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 04:50:43] 2025-05-24 11:50:29,499 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 04:50:43] 2025-05-24 11:50:29,500 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 04:50:43] 2025-05-24 11:50:29,668 | INFO     | [job] retrieve thread has finished
[2025-05-24 04:50:43] 2025-05-24 11:50:29,669 | INFO     | [job] job monitor thread has finished
[2025-05-24 04:50:43] 2025-05-24 11:50:29,673 | INFO     | [payload] control thread has finished
[2025-05-24 04:50:43] 2025-05-24 11:50:29,690 | INFO     | [data] control thread has finished
[2025-05-24 04:50:43] 2025-05-24 11:50:29,821 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 04:50:43] 2025-05-24 11:50:29,933 | INFO     | [data] copytool_in thread has finished
[2025-05-24 04:50:43] 2025-05-24 11:50:30,013 | INFO     | [job] control thread has finished
[2025-05-24 04:50:43] 2025-05-24 11:50:30,072 | INFO     | [payload] failed_post thread has finished
[2025-05-24 04:50:43] 2025-05-24 11:50:30,340 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 04:50:43] 2025-05-24 11:50:30,476 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 04:50:43] 2025-05-24 11:50:30,497 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 04:50:43] 2025-05-24 11:50:30,514 | INFO     | [job] validate thread has finished
[2025-05-24 04:50:43] 2025-05-24 11:50:30,699 | INFO     | [payload] validate_post thread has finished
[2025-05-24 04:50:43] 2025-05-24 11:50:31,087 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 04:50:43] 2025-05-24 11:50:31,253 | INFO     | [data] copytool_out thread has finished
[2025-05-24 04:50:43] 2025-05-24 11:50:31,503 | INFO     | [job] queue monitor thread has finished
[2025-05-24 04:50:43] 2025-05-24 11:50:32,039 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 04:50:43] 2025-05-24 11:50:36,048 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 04:50:43] 2025-05-24 11:50:38,147 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140348883490624)>', '<ExcThread(monitor, started 140348030437120)>']
[2025-05-24 04:50:43] 2025-05-24 11:50:38,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 04:50:43] 2025-05-24 11:50:38,568 | INFO     | [monitor] control thread has ended
[2025-05-24 04:50:43] 2025-05-24 11:50:43,173 | INFO     | all workflow threads have been joined
[2025-05-24 04:50:43] 2025-05-24 11:50:43,174 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 04:50:43] 2025-05-24 11:50:43,174 | INFO     | traces error code: 0
[2025-05-24 04:50:43] 2025-05-24 11:50:43,174 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 04:50:43] 2025-05-24 11:50:43,259 [wrapper] ==== pilot stdout END ====
[2025-05-24 04:50:43] 2025-05-24 11:50:43,261 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 04:50:43] 2025-05-24 11:50:43,262 [wrapper] pilotpid: 1564541
[2025-05-24 04:50:43] 2025-05-24 11:50:43,264 [wrapper] Pilot exit status: 0
[2025-05-24 04:50:43] 2025-05-24 11:50:43,272 [wrapper] pandaids: 6665377863
[2025-05-24 04:50:43] 2025-05-24 11:50:43,310 [wrapper] cleanup supervisor_pilot 1564547 1564542
[2025-05-24 04:50:43] 2025-05-24 11:50:43,312 [wrapper] Test setup, not cleaning
[2025-05-24 04:50:43] 2025-05-24 11:50:43,314 [wrapper] apfmon messages muted
[2025-05-24 04:50:43] 2025-05-24 11:50:43,315 [wrapper] ==== wrapper stdout END ====
[2025-05-24 04:50:43] 2025-05-24 11:50:43,317 [wrapper] ==== wrapper stderr END ====
[2025-05-24 04:50:43]  *** Error codes and diagnostics ***
[2025-05-24 04:50:43]     "exeErrorCode": 65,
[2025-05-24 04:50:43]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-24 04:50:43]     "pilotErrorCode": 1305,
[2025-05-24 04:50:43]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-24 04:50:43]  *** Listing of results directory ***
[2025-05-24 04:50:43] total 224952
[2025-05-24 04:50:43] -rw-r--r--. 1 boinc boinc    495897 May 24 02:36 pilot3.tar.gz
[2025-05-24 04:50:43] -rwx------. 1 boinc boinc     37140 May 24 02:42 runpilot2-wrapper.sh
[2025-05-24 04:50:43] -rw-r--r--. 1 boinc boinc      5111 May 24 02:42 queuedata.json
[2025-05-24 04:50:43] -rw-r--r--. 1 boinc boinc       100 May 24 04:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 04:50:43] -rwxr-xr-x. 1 boinc boinc      7986 May 24 04:45 run_atlas
[2025-05-24 04:50:43] -rw-r--r--. 1 boinc boinc       105 May 24 04:45 job.xml
[2025-05-24 04:50:43] -rw-r--r--. 2 boinc boinc 226319204 May 24 04:45 EVNT.44871834._000579.pool.root.1
[2025-05-24 04:50:43] -rw-r--r--. 1 boinc boinc      6454 May 24 04:45 init_data.xml
[2025-05-24 04:50:43] -rw-r--r--. 2 boinc boinc     15093 May 24 04:45 start_atlas.sh
[2025-05-24 04:50:43] drwxrwx--x. 2 boinc boinc      4096 May 24 04:45 shared
[2025-05-24 04:50:43] -rw-r--r--. 2 boinc boinc    508876 May 24 04:45 input.tar.gz
[2025-05-24 04:50:43] -rw-r--r--. 1 boinc boinc         0 May 24 04:45 boinc_lockfile
[2025-05-24 04:50:43] -rw-r--r--. 1 boinc boinc      2558 May 24 04:45 pandaJob.out
[2025-05-24 04:50:43] -rw-------. 1 boinc boinc    988564 May 24 04:46 agis_schedconf.cvmfs.json
[2025-05-24 04:50:43] -rw-------. 1 boinc boinc   1596740 May 24 04:46 agis_ddmendpoints.agis.ALL.json
[2025-05-24 04:50:43] drwx------. 4 boinc boinc      4096 May 24 04:46 pilot3
[2025-05-24 04:50:43] -rw-r--r--. 1 boinc boinc       524 May 24 04:47 boinc_task_state.xml
[2025-05-24 04:50:43] -rw-------. 1 boinc boinc       963 May 24 04:48 memory_monitor_summary.json
[2025-05-24 04:50:43] -rw-------. 1 boinc boinc     21224 May 24 04:48 log.44871837._014462.job.log.tgz.1
[2025-05-24 04:50:43] -rw-------. 1 boinc boinc        95 May 24 04:50 pilot_heartbeat.json
[2025-05-24 04:50:43] -rw-------. 1 boinc boinc      8295 May 24 04:50 heartbeat.json
[2025-05-24 04:50:43] -rw-r--r--. 1 boinc boinc      8192 May 24 04:50 boinc_mmap_file
[2025-05-24 04:50:43] -rw-r--r--. 1 boinc boinc        22 May 24 04:50 wrapper_checkpoint.txt
[2025-05-24 04:50:43] -rw-------. 1 boinc boinc      4466 May 24 04:50 pilotlog.txt
[2025-05-24 04:50:43] -rw-------. 1 boinc boinc     79210 May 24 04:50 log.44871837._014462.job.log.1
[2025-05-24 04:50:43] -rw-------. 1 boinc boinc       188 May 24 04:50 output.list
[2025-05-24 04:50:43] -rw-r--r--. 1 boinc boinc       620 May 24 04:50 runtime_log
[2025-05-24 04:50:43] -rw-------. 1 boinc boinc    122880 May 24 04:50 result.tar.gz
[2025-05-24 04:50:43] -rw-r--r--. 1 boinc boinc      8647 May 24 04:50 runtime_log.err
[2025-05-24 04:50:43] -rw-------. 1 boinc boinc       645 May 24 04:50 9bxLDmWZ0c7n9Rq4apOajLDm4fhM0noT9bVof3QYDmfTMKDmCnRBWn.diag
[2025-05-24 04:50:43] -rw-r--r--. 1 boinc boinc     21930 May 24 04:50 stderr.txt
[2025-05-24 04:50:43] No HITS result produced
[2025-05-24 04:50:43]  *** Contents of shared directory: ***
[2025-05-24 04:50:43] total 221652
[2025-05-24 04:50:43] -rw-r--r--. 2 boinc boinc 226319204 May 24 04:45 ATLAS.root_0
[2025-05-24 04:50:43] -rw-r--r--. 2 boinc boinc     15093 May 24 04:45 start_atlas.sh
[2025-05-24 04:50:43] -rw-r--r--. 2 boinc boinc    508876 May 24 04:45 input.tar.gz
[2025-05-24 04:50:43] -rw-------. 1 boinc boinc    122880 May 24 04:50 result.tar.gz
04:50:45 (1560892): run_atlas exited; CPU time 24.767962
04:50:45 (1560892): called boinc_finish(0)

</stderr_txt>
]]>

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