Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-24 12:38:25 (45100): Detected: vboxwrapper 26206
2025-05-24 12:38:25 (45100): Detected: BOINC client v8.0.2
2025-05-24 12:38:25 (45100): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-05-24 12:38:26 (45100): Successfully copied 'init_data.xml' to the shared directory.
2025-05-24 12:38:26 (45100): Create VM. (boinc_34c202c07562c912, slot#0)
2025-05-24 12:38:27 (45100): Setting Memory Size for VM. (4800MB)
2025-05-24 12:38:27 (45100): Setting CPU Count for VM. (8)
2025-05-24 12:38:27 (45100): Setting Chipset Options for VM.
2025-05-24 12:38:27 (45100): Setting Graphics Controller Options for VM.
2025-05-24 12:38:28 (45100): Setting Boot Options for VM.
2025-05-24 12:38:28 (45100): Setting Network Configuration for NAT.
2025-05-24 12:38:28 (45100): Enabling VM Network Access.
2025-05-24 12:38:29 (45100): Disabling USB Support for VM.
2025-05-24 12:38:29 (45100): Disabling COM Port Support for VM.
2025-05-24 12:38:29 (45100): Disabling LPT Port Support for VM.
2025-05-24 12:38:29 (45100): Disabling Audio Support for VM.
2025-05-24 12:38:30 (45100): Disabling Clipboard Support for VM.
2025-05-24 12:38:30 (45100): Disabling Drag and Drop Support for VM.
2025-05-24 12:38:30 (45100): Adding storage controller(s) to VM.
2025-05-24 12:38:30 (45100): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-24 12:38:33 (45100): Adding VirtualBox Guest Additions to VM.
2025-05-24 12:38:33 (45100): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-24 12:38:34 (45100): forwarding host port 63521 to guest port 80
2025-05-24 12:38:34 (45100): Enabling remote desktop for VM.
2025-05-24 12:38:34 (45100): Required extension pack not installed, remote desktop not enabled.
2025-05-24 12:38:34 (45100): Enabling shared directory for VM.
2025-05-24 12:38:35 (45100): Starting VM using VBoxManage interface. (boinc_34c202c07562c912, slot#0)
2025-05-24 12:38:40 (45100): Successfully started VM. (PID = '48080')
2025-05-24 12:38:40 (45100): Reporting VM Process ID to BOINC.
2025-05-24 12:38:40 (45100): Guest Log: BIOS: VirtualBox 7.1.4
2025-05-24 12:38:40 (45100): Guest Log: CPUID EDX: 0x178bfbff
2025-05-24 12:38:40 (45100): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-24 12:38:40 (45100): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-24 12:38:40 (45100): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-24 12:38:40 (45100): Detected: Web Application Enabled (http://localhost:63521)
2025-05-24 12:38:40 (45100): Preference change detected
2025-05-24 12:38:40 (45100): Setting CPU throttle for VM. (100%)
2025-05-24 12:38:40 (45100): Setting network throttle for VM. (1024KB)
2025-05-24 12:38:40 (45100): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-24 12:38:42 (45100): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-24 12:38:42 (45100): Guest Log: BIOS: Booting from Hard Disk...
2025-05-24 12:38:44 (45100): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-24 12:38:44 (45100): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-24 12:38:44 (45100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-24 12:38:49 (45100): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-24 12:38:49 (45100): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-24 12:38:53 (45100): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-24 12:38:53 (45100): Guest Log: 00:00:00.000165 main     Log opened 2025-05-24T12:38:50.869668000Z
2025-05-24 12:38:53 (45100): Guest Log: 00:00:00.000260 main     OS Product: Linux
2025-05-24 12:38:53 (45100): Guest Log: 00:00:00.000285 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-24 12:38:53 (45100): Guest Log: 00:00:00.000305 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-24 12:38:53 (45100): Guest Log: 00:00:00.000325 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-24 12:38:53 (45100): Guest Log: 00:00:00.000325 main     Process ID: 1371
2025-05-24 12:38:53 (45100): Guest Log: 00:00:00.000326 main     Package type: LINUX_64BITS_GENERIC
2025-05-24 12:38:53 (45100): Guest Log: 00:00:00.001047 main     5.2.32 r132073 started. Verbose level = 0
2025-05-24 12:38:53 (45100): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-24 12:38:53 (45100): Guest Log: [INFO] Mounting shared directory
2025-05-24 12:38:53 (45100): Guest Log: [INFO] Checking for init_data.xml
2025-05-24 12:38:56 (45100): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-24 12:38:56 (45100): Guest Log: [INFO] Detected branch: prod
2025-05-24 12:38:56 (45100): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-24 12:38:56 (45100): Guest Log: Copying input files
2025-05-24 12:38:57 (45100): Guest Log: Copied input files into RunAtlas.
2025-05-24 12:38:57 (45100): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.3:3128 - will set in /etc/cvmfs/default.local
2025-05-24 12:39:03 (45100): Guest Log: 00:00:10.037346 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 391 270 000ns (GuestNow=1 748 104 742 263 023 000 ns GuestLast=1 748 090 330 871 753 000 ns fSetTimeLastLoop=true )
2025-05-24 12:39:06 (45100): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-24 12:39:06 (45100): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-24 12:39:06 (45100): Guest Log: 2.6.3.0 1652 0 31668 146373 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.3:3128 1
2025-05-24 12:39:07 (45100): Guest Log: copied the webapp to /var/www
2025-05-24 12:39:07 (45100): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-24 12:39:07 (45100): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-24 12:39:07 (45100): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-24 12:39:07 (45100): Guest Log:  *** Starting ATLAS job. (PandaID=6665287048 taskID=44871837) ***
2025-05-24 13:36:39 (45100): Guest Log:  *** Job finished ***
2025-05-24 13:36:39 (45100): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-24 13:36:39 (45100): Guest Log: 2025-05-24 17:36:25,727 | INFO     | [data] queue_monitor thread has finished
2025-05-24 13:36:39 (45100): Guest Log: 2025-05-24 17:36:31,137 | INFO     | job.realtimelogging is not enabled
2025-05-24 13:36:39 (45100): Guest Log: 2025-05-24 17:36:32,165 | INFO     | [payload] run_realtimelog thread has finished
2025-05-24 13:36:39 (45100): Guest Log: 2025-05-24 17:36:32,380 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140045903755072)>', '<ExcThread(monitor, started 140045159741184)>']
2025-05-24 13:36:39 (45100): Guest Log: 2025-05-24 17:36:33,331 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-24 13:36:39 (45100): Guest Log: 2025-05-24 17:36:33,331 | INFO     | [monitor] control thread has ended
2025-05-24 13:36:39 (45100): Guest Log: 2025-05-24 17:36:37,384 | INFO     | all workflow threads have been joined
2025-05-24 13:36:39 (45100): Guest Log: 2025-05-24 17:36:37,384 | INFO     | end of generic workflow (traces error code: 0)
2025-05-24 13:36:39 (45100): Guest Log: 2025-05-24 17:36:37,384 | INFO     | traces error code: 0
2025-05-24 13:36:39 (45100): Guest Log: 2025-05-24 17:36:37,384 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-24 13:36:39 (45100): Guest Log: 2025-05-24 17:36:37,444 [wrapper] ==== pilot stdout END ====
2025-05-24 13:36:39 (45100): Guest Log: 2025-05-24 17:36:37,448 [wrapper] ==== wrapper stdout RESUME ====
2025-05-24 13:36:39 (45100): Guest Log: 2025-05-24 17:36:37,453 [wrapper] pilotpid: 5999
2025-05-24 13:36:39 (45100): Guest Log: 2025-05-24 17:36:37,456 [wrapper] Pilot exit status: 0
2025-05-24 13:36:39 (45100): Guest Log: 2025-05-24 17:36:37,475 [wrapper] pandaids: 6665287048
2025-05-24 13:36:39 (45100): Guest Log: 2025-05-24 17:36:37,498 [wrapper] cleanup supervisor_pilot 22117 6000
2025-05-24 13:36:39 (45100): Guest Log: 2025-05-24 17:36:37,503 [wrapper] Test setup, not cleaning
2025-05-24 13:36:39 (45100): Guest Log: 2025-05-24 17:36:37,508 [wrapper] apfmon messages muted
2025-05-24 13:36:39 (45100): Guest Log: 2025-05-24 17:36:37,512 [wrapper] ==== wrapper stdout END ====
2025-05-24 13:36:39 (45100): Guest Log: 2025-05-24 17:36:37,516 [wrapper] ==== wrapper stderr END ====
2025-05-24 13:36:39 (45100): Guest Log:  *** Error codes and diagnostics ***
2025-05-24 13:36:39 (45100): Guest Log:     "exeErrorCode": 0,
2025-05-24 13:36:39 (45100): Guest Log:     "exeErrorDiag": "",
2025-05-24 13:36:39 (45100): Guest Log:     "pilotErrorCode": 0,
2025-05-24 13:36:39 (45100): Guest Log:     "pilotErrorDiag": "",
2025-05-24 13:36:39 (45100): Guest Log:  *** Listing of results directory ***
2025-05-24 13:36:39 (45100): Guest Log: total 195604
2025-05-24 13:36:39 (45100): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 24 08:12 pilot3.tar.gz
2025-05-24 13:36:39 (45100): Guest Log: -rwx------. 1 atlas atlas     37140 May 24 08:20 runpilot2-wrapper.sh
2025-05-24 13:36:39 (45100): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 24 08:20 queuedata.json
2025-05-24 13:36:39 (45100): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 24 16:38 start_atlas.sh
2025-05-24 13:36:39 (45100): Guest Log: -rwxr-xr-x. 1 atlas atlas    508878 May 24 16:38 input.tar.gz
2025-05-24 13:36:39 (45100): Guest Log: -rwxr-xr-x. 1 atlas atlas      9304 May 24 16:38 init_data.xml
2025-05-24 13:36:39 (45100): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 24 16:38 EVNT.44871834._000480.pool.root.1 -> /data/./ATLAS.root_0
2025-05-24 13:36:39 (45100): Guest Log: -rw-r--r--. 1 atlas atlas      2558 May 24 16:39 pandaJob.out
2025-05-24 13:36:39 (45100): Guest Log: -rw-------. 1 atlas atlas    988572 May 24 16:39 agis_schedconf.cvmfs.json
2025-05-24 13:36:39 (45100): Guest Log: -rw-------. 1 atlas atlas   1596740 May 24 16:39 agis_ddmendpoints.agis.ALL.json
2025-05-24 13:36:39 (45100): Guest Log: drwx------. 4 atlas atlas      4096 May 24 16:39 pilot3
2025-05-24 13:36:39 (45100): Guest Log: -rw-------. 1 atlas atlas 195297726 May 24 17:35 HITS.44871837._011989.pool.root.1
2025-05-24 13:36:39 (45100): Guest Log: -rw-------. 1 atlas atlas        95 May 24 17:35 pilot_heartbeat.json
2025-05-24 13:36:39 (45100): Guest Log: -rw-------. 1 atlas atlas      1037 May 24 17:36 memory_monitor_summary.json
2025-05-24 13:36:39 (45100): Guest Log: -rw-------. 1 atlas atlas    290925 May 24 17:36 log.44871837._011989.job.log.tgz.1
2025-05-24 13:36:39 (45100): Guest Log: -rw-------. 1 atlas atlas      7717 May 24 17:36 heartbeat.json
2025-05-24 13:36:39 (45100): Guest Log: -rw-------. 1 atlas atlas      4485 May 24 17:36 pilotlog.txt
2025-05-24 13:36:39 (45100): Guest Log: -rw-------. 1 atlas atlas    328534 May 24 17:36 log.44871837._011989.job.log.1
2025-05-24 13:36:39 (45100): Guest Log: -rw-------. 1 atlas atlas       357 May 24 17:36 output.list
2025-05-24 13:36:39 (45100): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 24 17:36 runtime_log
2025-05-24 13:36:39 (45100): Guest Log: -rw-------. 1 atlas atlas    634880 May 24 17:36 result.tar.gz
2025-05-24 13:36:39 (45100): Guest Log: -rw-r--r--. 1 atlas atlas      8591 May 24 17:36 runtime_log.err
2025-05-24 13:36:39 (45100): Guest Log: -rw-------. 1 atlas atlas       655 May 24 17:36 0QaMDmUIzc7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaaQKDm6eARFm.diag
2025-05-24 13:36:39 (45100): Guest Log: Looking for outputfile HITS.44871837._011989.pool.root.1
2025-05-24 13:36:39 (45100): Guest Log: HITS file was successfully produced
2025-05-24 13:36:39 (45100): Guest Log: -rw-------. 1 atlas atlas 195297726 May 24 17:35 /home/atlas/RunAtlas/HITS.44871837._011989.pool.root.1
2025-05-24 13:36:40 (45100): Guest Log: Successfully finished the ATLAS job!
2025-05-24 13:36:40 (45100): Guest Log: Copying the results back to the shared directory!
2025-05-24 13:36:40 (45100): Guest Log:  *** Contents of shared directory: ***
2025-05-24 13:36:40 (45100): Guest Log: total 410512
2025-05-24 13:36:40 (45100): Guest Log: -rwxrwxrwx. 1 root root 223883670 May 24 16:38 ATLAS.root_0
2025-05-24 13:36:40 (45100): Guest Log: -rwxrwxrwx. 1 root root 195297726 May 24  2025 HITS.pool.root.1
2025-05-24 13:36:40 (45100): Guest Log: -rwxrwxrwx. 1 root root      9304 May 24 16:38 init_data.xml
2025-05-24 13:36:40 (45100): Guest Log: -rwxrwxrwx. 1 root root    508878 May 24 11:31 input.tar.gz
2025-05-24 13:36:40 (45100): Guest Log: -rwxrwxrwx. 1 root root    634880 May 24  2025 result.tar.gz
2025-05-24 13:36:40 (45100): Guest Log: -rwxrwxrwx. 1 root root     15093 May 24 11:31 start_atlas.sh
2025-05-24 13:36:40 (45100): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-24 13:36:40 (45100): VM Completion File Detected.
2025-05-24 13:36:40 (45100): Powering off VM.
2025-05-24 13:36:40 (45100): Successfully stopped VM.
2025-05-24 13:36:40 (45100): Deregistering VM. (boinc_34c202c07562c912, slot#0)
2025-05-24 13:36:41 (45100): Removing network bandwidth throttle group from VM.
2025-05-24 13:36:41 (45100): Removing VM from VirtualBox.
13:36:46 (45100): called boinc_finish(0)

</stderr_txt>
]]>

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