Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:42:01 (94231): wrapper (7.7.26015): starting
07:42:01 (94231): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 07:42:01] Arguments: --nthreads 8
[2025-05-24 07:42:01] Threads: 8
[2025-05-24 07:42:01] Checking for CVMFS
[2025-05-24 07:42:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 07:42:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 07:42:02] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 07:42:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 07:42:02] 2.11.2.0 7041 12896 159916 146366 3 196 13111892 18432001 21125 130560 0 41039579 99.251 60349502 40923 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 07:42:02] CVMFS is ok
[2025-05-24 07:42:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 07:42:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 07:42:02] Further information can be found at the LHC@home message board.
[2025-05-24 07:42:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 07:42:02] Checking for apptainer binary...
[2025-05-24 07:42:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 07:42:02] Running /usr/bin/apptainer --version
[2025-05-24 07:42:02] apptainer version 1.3.2-1.el7
[2025-05-24 07:42:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 07:42:06] c-211-33-2.aglt2.org
[2025-05-24 07:42:06] apptainer works
[2025-05-24 07:42:06] Set ATHENA_PROC_NUMBER=8
[2025-05-24 07:42:06] Set ATHENA_CORE_NUMBER=8
[2025-05-24 07:42:06] Starting ATLAS job with PandaID=6665287260
[2025-05-24 07:42:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:00:02 (94231): BOINC client no longer exists - exiting
13:00:02 (94231): timer handler: client dead, exiting
13:09:42 (300462): wrapper (7.7.26015): starting
13:09:42 (300462): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 13:09:42] Arguments: --nthreads 8
[2025-05-24 13:09:42] Threads: 8
[2025-05-24 13:09:42] This job has been restarted, cleaning up previous attempt
[2025-05-24 13:09:42] Checking for CVMFS
[2025-05-24 13:09:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 13:09:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 13:09:44] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 13:09:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 13:09:44] 2.11.2.0 7041 13224 163108 146373 1 594 13483011 18432001 18784 130560 0 42022011 99.268 60463198 39587 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 13:09:44] CVMFS is ok
[2025-05-24 13:09:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 13:09:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 13:09:44] Further information can be found at the LHC@home message board.
[2025-05-24 13:09:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 13:09:44] Checking for apptainer binary...
[2025-05-24 13:09:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 13:09:44] Running /usr/bin/apptainer --version
[2025-05-24 13:09:45] apptainer version 1.3.2-1.el7
[2025-05-24 13:09:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 13:09:50] c-211-33-2.aglt2.org
[2025-05-24 13:09:50] apptainer works
[2025-05-24 13:09:50] Set ATHENA_PROC_NUMBER=8
[2025-05-24 13:09:50] Set ATHENA_CORE_NUMBER=8
[2025-05-24 13:09:50] Starting ATLAS job with PandaID=6665287260
[2025-05-24 13:09:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 19:26:41]  *** The last 200 lines of the pilot log: ***
[2025-05-24 19:26:41] 2025-05-24 23:26:22,918 | INFO     | sum of square deviations: 14108159255.803928
[2025-05-24 19:26:41] 2025-05-24 23:26:22,921 | INFO     | sum of deviations: 32501677588.431377
[2025-05-24 19:26:41] 2025-05-24 23:26:22,922 | INFO     | mean x: 1748118260.254902
[2025-05-24 19:26:41] 2025-05-24 23:26:22,922 | INFO     | mean y: 2489904.8963585435
[2025-05-24 19:26:41] 2025-05-24 23:26:22,922 | INFO     | -- intersect: -4024738243.799273
[2025-05-24 19:26:41] 2025-05-24 23:26:22,922 | INFO     | intersect: -4024738243.799273
[2025-05-24 19:26:41] 2025-05-24 23:26:22,923 | INFO     | chi2: 0.01003915855753323
[2025-05-24 19:26:41] 2025-05-24 23:26:22,923 | INFO     | current chi2=0.01003915855753323 (change=92.14543972093917 %)
[2025-05-24 19:26:41] 2025-05-24 23:26:22,923 | INFO     | sum of square deviations: 13523599610.474422
[2025-05-24 19:26:41] 2025-05-24 23:26:22,926 | INFO     | sum of deviations: 26660836472.735813
[2025-05-24 19:26:41] 2025-05-24 23:26:22,926 | INFO     | mean x: 1748118412.7585227
[2025-05-24 19:26:41] 2025-05-24 23:26:22,926 | INFO     | mean y: 2491425.3380681816
[2025-05-24 19:26:41] 2025-05-24 23:26:22,927 | INFO     | -- intersect: -3443802496.395279
[2025-05-24 19:26:41] 2025-05-24 23:26:22,927 | INFO     | intersect: -3443802496.395279
[2025-05-24 19:26:41] 2025-05-24 23:26:22,927 | INFO     | chi2: 0.003056541922528939
[2025-05-24 19:26:41] 2025-05-24 23:26:22,927 | INFO     | current chi2=0.003056541922528939 (change=69.5538036877069 %)
[2025-05-24 19:26:41] 2025-05-24 23:26:22,928 | INFO     | sum of square deviations: 12955433836.656925
[2025-05-24 19:26:41] 2025-05-24 23:26:22,931 | INFO     | sum of deviations: 23197685022.239174
[2025-05-24 19:26:41] 2025-05-24 23:26:22,931 | INFO     | mean x: 1748118565.259366
[2025-05-24 19:26:41] 2025-05-24 23:26:22,931 | INFO     | mean y: 2492354.5417867433
[2025-05-24 19:26:41] 2025-05-24 23:26:22,931 | INFO     | -- intersect: -3127646270.663814
[2025-05-24 19:26:41] 2025-05-24 23:26:22,931 | INFO     | intersect: -3127646270.663814
[2025-05-24 19:26:41] 2025-05-24 23:26:22,932 | INFO     | chi2: 0.0013990754923429622
[2025-05-24 19:26:41] 2025-05-24 23:26:22,932 | INFO     | current chi2=0.0013990754923429622 (change=54.22685087252501 %)
[2025-05-24 19:26:41] 2025-05-24 23:26:22,932 | INFO     | sum of square deviations: 12403429066.856852
[2025-05-24 19:26:41] 2025-05-24 23:26:22,935 | INFO     | sum of deviations: 20946081723.362587
[2025-05-24 19:26:41] 2025-05-24 23:26:22,935 | INFO     | mean x: 1748118717.75731
[2025-05-24 19:26:41] 2025-05-24 23:26:22,935 | INFO     | mean y: 2492975.6549707605
[2025-05-24 19:26:41] 2025-05-24 23:26:22,935 | INFO     | -- intersect: -2949613036.877202
[2025-05-24 19:26:41] 2025-05-24 23:26:22,936 | INFO     | intersect: -2949613036.877202
[2025-05-24 19:26:41] 2025-05-24 23:26:22,936 | INFO     | chi2: 0.0008490601050300903
[2025-05-24 19:26:41] 2025-05-24 23:26:22,936 | INFO     | current chi2=0.0008490601050300903 (change=39.3127740656645 %)
[2025-05-24 19:26:41] 2025-05-24 23:26:22,937 | INFO     | sum of square deviations: 11867331206.053381
[2025-05-24 19:26:41] 2025-05-24 23:26:22,939 | INFO     | sum of deviations: 19141097823.833824
[2025-05-24 19:26:41] 2025-05-24 23:26:22,940 | INFO     | mean x: 1748118870.255193
[2025-05-24 19:26:41] 2025-05-24 23:26:22,940 | INFO     | mean y: 2493489.0949554895
[2025-05-24 19:26:41] 2025-05-24 23:26:22,940 | INFO     | -- intersect: -2817088582.2452726
[2025-05-24 19:26:41] 2025-05-24 23:26:22,940 | INFO     | intersect: -2817088582.2452726
[2025-05-24 19:26:41] 2025-05-24 23:26:22,940 | INFO     | chi2: 0.0005921126209007508
[2025-05-24 19:26:41] 2025-05-24 23:26:22,940 | INFO     | current chi2=0.0005921126209007508 (change=30.262578892484104 %)
[2025-05-24 19:26:41] 2025-05-24 23:26:22,941 | INFO     | sum of square deviations: 11346908667.746962
[2025-05-24 19:26:41] 2025-05-24 23:26:22,944 | INFO     | sum of deviations: 17786993081.81929
[2025-05-24 19:26:41] 2025-05-24 23:26:22,944 | INFO     | mean x: 1748119022.753012
[2025-05-24 19:26:41] 2025-05-24 23:26:22,944 | INFO     | mean y: 2493885.6807228914
[2025-05-24 19:26:41] 2025-05-24 23:26:22,944 | INFO     | -- intersect: -2737792642.956552
[2025-05-24 19:26:41] 2025-05-24 23:26:22,944 | INFO     | intersect: -2737792642.956552
[2025-05-24 19:26:41] 2025-05-24 23:26:22,944 | INFO     | chi2: 0.0005027976990302222
[2025-05-24 19:26:41] 2025-05-24 23:26:22,944 | INFO     | current chi2=0.0005027976990302222 (change=15.084110474567893 %)
[2025-05-24 19:26:41] 2025-05-24 23:26:22,945 | INFO     | left removable region: 70
[2025-05-24 19:26:41] 2025-05-24 23:26:22,945 | INFO     | sum of square deviations: 7640813336.687268
[2025-05-24 19:26:41] 2025-05-24 23:26:22,947 | INFO     | sum of deviations: 11235659274.972506
[2025-05-24 19:26:41] 2025-05-24 23:26:22,947 | INFO     | mean x: 1748119907.250859
[2025-05-24 19:26:41] 2025-05-24 23:26:22,947 | INFO     | mean y: 2495578.109965636
[2025-05-24 19:26:41] 2025-05-24 23:26:22,947 | INFO     | -- intersect: -2568078886.1764255
[2025-05-24 19:26:41] 2025-05-24 23:26:22,948 | INFO     | intersect: -2568078886.1764255
[2025-05-24 19:26:41] 2025-05-24 23:26:22,948 | INFO     | chi2: 0.0002632027241883604
[2025-05-24 19:26:41] 2025-05-24 23:26:22,948 | INFO     | -- intersect: -2568078886.1764255
[2025-05-24 19:26:41] 2025-05-24 23:26:22,948 | INFO     | current memory leak: 1.47 B/s (using 291 data points, chi2=0.00)
[2025-05-24 19:26:41] 2025-05-24 23:26:22,949 | INFO     | ..............................
[2025-05-24 19:26:41] 2025-05-24 23:26:22,949 | INFO     | . Timing measurements:
[2025-05-24 19:26:41] 2025-05-24 23:26:22,949 | INFO     | . get job = 0 s
[2025-05-24 19:26:41] 2025-05-24 23:26:22,949 | INFO     | . initial setup = 5 s
[2025-05-24 19:26:41] 2025-05-24 23:26:22,949 | INFO     | . payload setup = 46 s
[2025-05-24 19:26:41] 2025-05-24 23:26:22,949 | INFO     | . stage-in = 0 s
[2025-05-24 19:26:41] 2025-05-24 23:26:22,949 | INFO     | . payload execution = 22409 s
[2025-05-24 19:26:41] 2025-05-24 23:26:22,950 | INFO     | . stage-out = 2 s
[2025-05-24 19:26:41] 2025-05-24 23:26:22,950 | INFO     | . log creation = 0 s
[2025-05-24 19:26:41] 2025-05-24 23:26:22,950 | INFO     | ..............................
[2025-05-24 19:26:41] 2025-05-24 23:26:23,143 | INFO     | 
[2025-05-24 19:26:41] 2025-05-24 23:26:23,144 | INFO     | job summary report
[2025-05-24 19:26:41] 2025-05-24 23:26:23,144 | INFO     | --------------------------------------------------
[2025-05-24 19:26:41] 2025-05-24 23:26:23,144 | INFO     | PanDA job id: 6665287260
[2025-05-24 19:26:41] 2025-05-24 23:26:23,144 | INFO     | task id: 44871837
[2025-05-24 19:26:41] 2025-05-24 23:26:23,144 | INFO     | errors: (none)
[2025-05-24 19:26:41] 2025-05-24 23:26:23,144 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 19:26:41] 2025-05-24 23:26:23,144 | INFO     | pilot state: finished 
[2025-05-24 19:26:41] 2025-05-24 23:26:23,144 | INFO     | transexitcode: 0
[2025-05-24 19:26:41] 2025-05-24 23:26:23,144 | INFO     | exeerrorcode: 0
[2025-05-24 19:26:41] 2025-05-24 23:26:23,144 | INFO     | exeerrordiag: 
[2025-05-24 19:26:41] 2025-05-24 23:26:23,144 | INFO     | exitcode: 0
[2025-05-24 19:26:41] 2025-05-24 23:26:23,144 | INFO     | exitmsg: OK
[2025-05-24 19:26:41] 2025-05-24 23:26:23,145 | INFO     | cpuconsumptiontime: 59862 s
[2025-05-24 19:26:41] 2025-05-24 23:26:23,145 | INFO     | nevents: 400
[2025-05-24 19:26:41] 2025-05-24 23:26:23,145 | INFO     | neventsw: 0
[2025-05-24 19:26:41] 2025-05-24 23:26:23,145 | INFO     | pid: 43799
[2025-05-24 19:26:41] 2025-05-24 23:26:23,145 | INFO     | pgrp: 43799
[2025-05-24 19:26:41] 2025-05-24 23:26:23,145 | INFO     | corecount: 8
[2025-05-24 19:26:41] 2025-05-24 23:26:23,145 | INFO     | event service: False
[2025-05-24 19:26:41] 2025-05-24 23:26:23,145 | INFO     | sizes: {0: 2393506, 1: 2393590, 2: 2393761, 13: 2393789, 23: 2393845, 27: 2394079, 34: 2394235, 22459: 2428463, 22460: 2428462, 22463: 2437515, 22480: 2437629}
[2025-05-24 19:26:41] 2025-05-24 23:26:23,145 | INFO     | --------------------------------------------------
[2025-05-24 19:26:41] 2025-05-24 23:26:23,145 | INFO     | 
[2025-05-24 19:26:41] 2025-05-24 23:26:23,145 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-05-24 19:26:41] 2025-05-24 23:26:23,316 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 19:26:41] 2025-05-24 23:26:23,317 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 19:26:41] 2025-05-24 23:26:23,317 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 19:26:41] 2025-05-24 23:26:23,317 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 19:26:41] 2025-05-24 23:26:23,317 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 19:26:41] 2025-05-24 23:26:23,317 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 19:26:41] 2025-05-24 23:26:23,317 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 19:26:41] 2025-05-24 23:26:23,317 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 19:26:41] 2025-05-24 23:26:23,317 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 19:26:41] 2025-05-24 23:26:23,317 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 19:26:41] 2025-05-24 23:26:23,317 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 19:26:41] 2025-05-24 23:26:23,317 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 19:26:41] 2025-05-24 23:26:23,317 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 19:26:41] 2025-05-24 23:26:23,317 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 19:26:41] 2025-05-24 23:26:23,317 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 19:26:41] 2025-05-24 23:26:23,318 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 19:26:41] 2025-05-24 23:26:23,318 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 19:26:41] 2025-05-24 23:26:23,318 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 19:26:41] 2025-05-24 23:26:23,318 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 19:26:41] 2025-05-24 23:26:23,318 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 19:26:41] 2025-05-24 23:26:23,318 | INFO     | job 6665287260 has completed (purged errors)
[2025-05-24 19:26:41] 2025-05-24 23:26:23,318 | INFO     | overall cleanup function is called
[2025-05-24 19:26:41] 2025-05-24 23:26:24,330 | INFO     | --- collectZombieJob: --- 10, [43799]
[2025-05-24 19:26:41] 2025-05-24 23:26:24,331 | INFO     | zombie collector waiting for pid 43799
[2025-05-24 19:26:41] 2025-05-24 23:26:24,331 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 19:26:41] 2025-05-24 23:26:24,331 | INFO     | collected zombie processes
[2025-05-24 19:26:41] 2025-05-24 23:26:24,331 | INFO     | will attempt to kill all subprocesses of pid=43799
[2025-05-24 19:26:41] 2025-05-24 23:26:24,745 | INFO     | process IDs to be killed: [43799] (in reverse order)
[2025-05-24 19:26:41] 2025-05-24 23:26:25,182 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 19:26:41] 2025-05-24 23:26:25,182 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 19:26:41] 2025-05-24 23:26:25,193 | INFO     | did not find any defunct processes belonging to 43799
[2025-05-24 19:26:41] 2025-05-24 23:26:25,203 | INFO     | did not find any defunct processes belonging to 43799
[2025-05-24 19:26:41] 2025-05-24 23:26:25,203 | INFO     | ready for new job
[2025-05-24 19:26:41] 2025-05-24 23:26:25,203 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 19:26:41] 2025-05-24 23:26:25,205 | INFO     | **************************************
[2025-05-24 19:26:41] 2025-05-24 23:26:25,205 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 19:26:41] 2025-05-24 23:26:25,206 | INFO     | **************************************
[2025-05-24 19:26:41] 2025-05-24 23:26:25,206 | INFO     | 
[2025-05-24 19:26:41] 2025-05-24 23:26:25,211 | INFO     | architecture information:
[2025-05-24 19:26:41] 2025-05-24 23:26:25,211 | INFO     | executing command: cat /etc/os-release
[2025-05-24 19:26:41] 2025-05-24 23:26:25,243 | INFO     | cat /etc/os-release:
[2025-05-24 19:26:41] NAME="CentOS Linux"
[2025-05-24 19:26:41] VERSION="7 (Core)"
[2025-05-24 19:26:41] ID="centos"
[2025-05-24 19:26:41] ID_LIKE="rhel fedora"
[2025-05-24 19:26:41] VERSION_ID="7"
[2025-05-24 19:26:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 19:26:41] ANSI_COLOR="0;31"
[2025-05-24 19:26:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 19:26:41] HOME_URL="https://www.centos.org/"
[2025-05-24 19:26:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 19:26:41] 
[2025-05-24 19:26:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 19:26:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 19:26:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 19:26:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 19:26:41] 
[2025-05-24 19:26:41] 2025-05-24 23:26:25,244 | INFO     | **************************************
[2025-05-24 19:26:41] 2025-05-24 23:26:25,748 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-05-24 19:26:41] 2025-05-24 23:26:26,083 | INFO     | sufficient remaining disk space (103589871616 B)
[2025-05-24 19:26:41] 2025-05-24 23:26:26,084 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 19:26:41] 2025-05-24 23:26:26,084 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 19:26:41] 2025-05-24 23:26:26,084 | INFO     | update_server=False
[2025-05-24 19:26:41] 2025-05-24 23:26:26,090 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 19:26:41] 2025-05-24 23:26:26,091 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 19:26:41] 2025-05-24 23:26:26,430 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 19:26:41] 2025-05-24 23:26:26,430 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 19:26:41] 2025-05-24 23:26:26,430 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 19:26:41] 2025-05-24 23:26:26,482 | INFO     | all payload control threads have been joined
[2025-05-24 19:26:41] 2025-05-24 23:26:26,889 | INFO     | all data control threads have been joined
[2025-05-24 19:26:41] 2025-05-24 23:26:26,923 | INFO     | all job control threads have been joined
[2025-05-24 19:26:41] 2025-05-24 23:26:27,076 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 19:26:41] 2025-05-24 23:26:27,077 | INFO     | aborting loop
[2025-05-24 19:26:41] 2025-05-24 23:26:27,099 | INFO     | [job] retrieve thread has finished
[2025-05-24 19:26:41] 2025-05-24 23:26:27,133 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 19:26:41] 2025-05-24 23:26:27,262 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 19:26:41] 2025-05-24 23:26:27,490 | INFO     | [payload] control thread has finished
[2025-05-24 19:26:41] 2025-05-24 23:26:27,621 | INFO     | [data] copytool_in thread has finished
[2025-05-24 19:26:41] 2025-05-24 23:26:27,699 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 19:26:41] 2025-05-24 23:26:27,728 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 19:26:41] 2025-05-24 23:26:27,731 | INFO     | [job] validate thread has finished
[2025-05-24 19:26:41] 2025-05-24 23:26:27,885 | INFO     | [payload] validate_post thread has finished
[2025-05-24 19:26:41] 2025-05-24 23:26:27,895 | INFO     | [data] control thread has finished
[2025-05-24 19:26:41] 2025-05-24 23:26:27,930 | INFO     | [job] control thread has finished
[2025-05-24 19:26:41] 2025-05-24 23:26:28,066 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 19:26:41] 2025-05-24 23:26:28,083 | INFO     | [job] job monitor thread has finished
[2025-05-24 19:26:41] 2025-05-24 23:26:28,098 | INFO     | [data] copytool_out thread has finished
[2025-05-24 19:26:41] 2025-05-24 23:26:28,535 | INFO     | [payload] failed_post thread has finished
[2025-05-24 19:26:41] 2025-05-24 23:26:29,075 | INFO     | [job] queue monitor thread has finished
[2025-05-24 19:26:41] 2025-05-24 23:26:29,431 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 19:26:41] 2025-05-24 23:26:33,441 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 19:26:41] 2025-05-24 23:26:35,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140263674095424)>', '<ExcThread(monitor, started 140263456392960)>']
[2025-05-24 19:26:41] 2025-05-24 23:26:35,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 19:26:41] 2025-05-24 23:26:35,482 | INFO     | [monitor] control thread has ended
[2025-05-24 19:26:41] 2025-05-24 23:26:40,061 | INFO     | all workflow threads have been joined
[2025-05-24 19:26:41] 2025-05-24 23:26:40,062 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 19:26:41] 2025-05-24 23:26:40,062 | INFO     | traces error code: 0
[2025-05-24 19:26:41] 2025-05-24 23:26:40,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 19:26:41] 2025-05-24 23:26:40,649 [wrapper] ==== pilot stdout END ====
[2025-05-24 19:26:41] 2025-05-24 23:26:40,652 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 19:26:41] 2025-05-24 23:26:40,656 [wrapper] pilotpid: 325110
[2025-05-24 19:26:41] 2025-05-24 23:26:40,659 [wrapper] Pilot exit status: 0
[2025-05-24 19:26:41] 2025-05-24 23:26:40,673 [wrapper] pandaids: 6665287260 6665287260
[2025-05-24 19:26:41] 2025-05-24 23:26:40,752 [wrapper] cleanup supervisor_pilot 217529 325111
[2025-05-24 19:26:41] 2025-05-24 23:26:40,755 [wrapper] Test setup, not cleaning
[2025-05-24 19:26:41] 2025-05-24 23:26:40,758 [wrapper] apfmon messages muted
[2025-05-24 19:26:41] 2025-05-24 23:26:40,761 [wrapper] ==== wrapper stdout END ====
[2025-05-24 19:26:41] 2025-05-24 23:26:40,763 [wrapper] ==== wrapper stderr END ====
[2025-05-24 19:26:41]  *** Error codes and diagnostics ***
[2025-05-24 19:26:41]     "exeErrorCode": 0,
[2025-05-24 19:26:41]     "exeErrorDiag": "",
[2025-05-24 19:26:41]     "pilotErrorCode": 0,
[2025-05-24 19:26:41]     "pilotErrorDiag": "",
[2025-05-24 19:26:41]  *** Listing of results directory ***
[2025-05-24 19:26:41] total 644616
[2025-05-24 19:26:41] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-05-24 19:26:41] -rw-r--r-- 1 boincer umatlas    495897 May 24 04:12 pilot3.tar.gz
[2025-05-24 19:26:41] -rw-r--r-- 1 boincer umatlas      5111 May 24 04:22 queuedata.json
[2025-05-24 19:26:41] -rwx------ 1 boincer umatlas     37140 May 24 04:23 runpilot2-wrapper.sh
[2025-05-24 19:26:41] -rw-r--r-- 1 boincer umatlas       100 May 24 07:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 19:26:41] -rwxr-xr-x 1 boincer umatlas      7986 May 24 07:41 run_atlas
[2025-05-24 19:26:41] -rw-r--r-- 1 boincer umatlas       105 May 24 07:41 job.xml
[2025-05-24 19:26:41] -rw-r--r-- 3 boincer umatlas 225287110 May 24 07:42 EVNT.44871834._000489.pool.root.1
[2025-05-24 19:26:41] -rw-r--r-- 3 boincer umatlas 225287110 May 24 07:42 ATLAS.root_0
[2025-05-24 19:26:41] -rw-r--r-- 2 boincer umatlas     15093 May 24 07:42 start_atlas.sh
[2025-05-24 19:26:41] drwxrwx--x 2 boincer umatlas      4096 May 24 07:42 shared
[2025-05-24 19:26:41] -rw-r--r-- 2 boincer umatlas    508882 May 24 07:42 input.tar.gz
[2025-05-24 19:26:41] -rw-r--r-- 1 boincer umatlas         0 May 24 07:42 boinc_lockfile
[2025-05-24 19:26:41] -rw-r--r-- 1 boincer umatlas      2555 May 24 13:09 pandaJob.out
[2025-05-24 19:26:41] -rw------- 1 boincer umatlas    988572 May 24 13:10 agis_schedconf.cvmfs.json
[2025-05-24 19:26:41] -rw-r--r-- 1 boincer umatlas      6301 May 24 19:18 init_data.xml
[2025-05-24 19:26:41] -rw------- 1 boincer umatlas 201007694 May 24 19:25 HITS.44871837._012201.pool.root.1
[2025-05-24 19:26:41] -rw-r--r-- 1 boincer umatlas       531 May 24 19:25 boinc_task_state.xml
[2025-05-24 19:26:41] -rw------- 1 boincer umatlas        96 May 24 19:25 pilot_heartbeat.json
[2025-05-24 19:26:41] -rw------- 1 boincer umatlas      1064 May 24 19:25 memory_monitor_summary.json
[2025-05-24 19:26:41] -rw------- 1 boincer umatlas   1596740 May 24 19:26 agis_ddmendpoints.agis.ALL.json
[2025-05-24 19:26:41] -rw------- 1 boincer umatlas    452551 May 24 19:26 log.44871837._012201.job.log.tgz.1
[2025-05-24 19:26:41] -rw------- 1 boincer umatlas      7761 May 24 19:26 heartbeat.json
[2025-05-24 19:26:41] -rw-r--r-- 1 boincer umatlas        29 May 24 19:26 wrapper_checkpoint.txt
[2025-05-24 19:26:41] -rw-r--r-- 1 boincer umatlas      8192 May 24 19:26 boinc_mmap_file
[2025-05-24 19:26:41] -rw------- 1 boincer umatlas      4354 May 24 19:26 pilotlog.txt
[2025-05-24 19:26:41] -rw------- 1 boincer umatlas   1887277 May 24 19:26 log.44871837._012201.job.log.1
[2025-05-24 19:26:41] -rw------- 1 boincer umatlas       357 May 24 19:26 output.list
[2025-05-24 19:26:41] -rw-r--r-- 1 boincer umatlas       620 May 24 19:26 runtime_log
[2025-05-24 19:26:41] -rw------- 1 boincer umatlas   2355200 May 24 19:26 result.tar.gz
[2025-05-24 19:26:41] -rw------- 1 boincer umatlas       789 May 24 19:26 u3INDmiLzc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmuFMKDmLkQ4No.diag
[2025-05-24 19:26:41] -rw-r--r-- 1 boincer umatlas      8755 May 24 19:26 runtime_log.err
[2025-05-24 19:26:41] -rw-r--r-- 1 boincer umatlas     23169 May 24 19:26 stderr.txt
[2025-05-24 19:26:41] HITS file was successfully produced:
[2025-05-24 19:26:41] -rw------- 1 boincer umatlas 201007694 May 24 19:25 shared/HITS.pool.root.1
[2025-05-24 19:26:41]  *** Contents of shared directory: ***
[2025-05-24 19:26:41] total 419128
[2025-05-24 19:26:41] -rw-r--r-- 3 boincer umatlas 225287110 May 24 07:42 ATLAS.root_0
[2025-05-24 19:26:41] -rw-r--r-- 2 boincer umatlas     15093 May 24 07:42 start_atlas.sh
[2025-05-24 19:26:41] -rw-r--r-- 2 boincer umatlas    508882 May 24 07:42 input.tar.gz
[2025-05-24 19:26:41] -rw------- 1 boincer umatlas 201007694 May 24 19:25 HITS.pool.root.1
[2025-05-24 19:26:41] -rw------- 1 boincer umatlas   2355200 May 24 19:26 result.tar.gz
19:26:42 (300462): run_atlas exited; CPU time 60566.115106
19:26:42 (300462): called boinc_finish(0)

</stderr_txt>
]]>

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