Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-24 06:53:03 (1980): Detected: vboxwrapper 26206
2025-05-24 06:53:03 (1980): Detected: BOINC client v8.0.4
2025-05-24 06:53:03 (1980): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-05-24 06:53:03 (1980): Successfully copied 'init_data.xml' to the shared directory.
2025-05-24 06:53:04 (1980): Create VM. (boinc_1146a5e15fbe9021, slot#3)
2025-05-24 06:53:04 (1980): Setting Memory Size for VM. (4400MB)
2025-05-24 06:53:05 (1980): Setting CPU Count for VM. (4)
2025-05-24 06:53:05 (1980): Setting Chipset Options for VM.
2025-05-24 06:53:05 (1980): Setting Graphics Controller Options for VM.
2025-05-24 06:53:05 (1980): Setting Boot Options for VM.
2025-05-24 06:53:06 (1980): Setting Network Configuration for NAT.
2025-05-24 06:53:06 (1980): Enabling VM Network Access.
2025-05-24 06:53:06 (1980): Disabling USB Support for VM.
2025-05-24 06:53:06 (1980): Disabling COM Port Support for VM.
2025-05-24 06:53:07 (1980): Disabling LPT Port Support for VM.
2025-05-24 06:53:07 (1980): Disabling Audio Support for VM.
2025-05-24 06:53:07 (1980): Disabling Clipboard Support for VM.
2025-05-24 06:53:07 (1980): Disabling Drag and Drop Support for VM.
2025-05-24 06:53:08 (1980): Adding storage controller(s) to VM.
2025-05-24 06:53:08 (1980): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-24 06:53:08 (1980): Adding VirtualBox Guest Additions to VM.
2025-05-24 06:53:09 (1980): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-24 06:53:09 (1980): forwarding host port 53970 to guest port 80
2025-05-24 06:53:09 (1980): Enabling remote desktop for VM.
2025-05-24 06:53:09 (1980): Required extension pack not installed, remote desktop not enabled.
2025-05-24 06:53:09 (1980): Enabling shared directory for VM.
2025-05-24 06:53:10 (1980): Starting VM using VBoxManage interface. (boinc_1146a5e15fbe9021, slot#3)
2025-05-24 06:53:15 (1980): Successfully started VM. (PID = '4796')
2025-05-24 06:53:15 (1980): Reporting VM Process ID to BOINC.
2025-05-24 06:53:15 (1980): Guest Log: BIOS: VirtualBox 7.1.6
2025-05-24 06:53:15 (1980): Guest Log: CPUID EDX: 0x178bfbff
2025-05-24 06:53:15 (1980): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-24 06:53:15 (1980): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-24 06:53:15 (1980): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-24 06:53:15 (1980): Detected: Web Application Enabled (http://localhost:53970)
2025-05-24 06:53:15 (1980): Preference change detected
2025-05-24 06:53:15 (1980): Setting CPU throttle for VM. (60%)
2025-05-24 06:53:16 (1980): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-24 06:53:17 (1980): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-24 06:53:17 (1980): Guest Log: BIOS: Booting from Hard Disk...
2025-05-24 06:53:20 (1980): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-24 06:53:20 (1980): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-24 06:53:20 (1980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-24 06:53:28 (1980): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-24 06:53:28 (1980): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-24 06:53:36 (1980): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-24 06:53:36 (1980): Guest Log: 00:00:00.000115 main     Log opened 2025-05-24T06:53:33.826553000Z
2025-05-24 06:53:36 (1980): Guest Log: 00:00:00.000190 main     OS Product: Linux
2025-05-24 06:53:36 (1980): Guest Log: 00:00:00.000219 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-24 06:53:36 (1980): Guest Log: 00:00:00.000241 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-24 06:53:36 (1980): Guest Log: 00:00:00.000263 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-24 06:53:36 (1980): Guest Log: 00:00:00.000263 main     Process ID: 1313
2025-05-24 06:53:36 (1980): Guest Log: 00:00:00.000264 main     Package type: LINUX_64BITS_GENERIC
2025-05-24 06:53:36 (1980): Guest Log: 00:00:00.001049 main     5.2.32 r132073 started. Verbose level = 0
2025-05-24 06:53:36 (1980): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-24 06:53:36 (1980): Guest Log: [INFO] Mounting shared directory
2025-05-24 06:53:36 (1980): Guest Log: [INFO] Checking for init_data.xml
2025-05-24 06:53:38 (1980): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-24 06:53:38 (1980): Guest Log: [INFO] Detected branch: prod
2025-05-24 06:53:38 (1980): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-24 06:53:38 (1980): Guest Log: Copying input files
2025-05-24 06:53:40 (1980): Guest Log: Copied input files into RunAtlas.
2025-05-24 06:53:40 (1980): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-24 06:53:40 (1980): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-24 06:53:40 (1980): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-24 06:53:40 (1980): Guest Log: Further information can be found at the LHC@home message board.
2025-05-24 06:53:46 (1980): Guest Log: 00:00:10.002851 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 412 227 486 000ns (GuestNow=1 748 084 026 055 862 000 ns GuestLast=1 748 069 613 828 376 000 ns fSetTimeLastLoop=true )
2025-05-24 06:55:25 (1980): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-24 06:55:25 (1980): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-24 06:55:25 (1980): Guest Log: 2.6.3.0 1590 1 32188 146364 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-24 06:55:40 (1980): Guest Log: copied the webapp to /var/www
2025-05-24 06:55:40 (1980): Guest Log: ATHENA_PROC_NUMBER=4
2025-05-24 06:55:40 (1980): Guest Log: ATHENA_CORE_NUMBER=4
2025-05-24 06:55:40 (1980): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-24 06:55:40 (1980): Guest Log:  *** Starting ATLAS job. (PandaID=6665285089 taskID=44871837) ***
2025-05-24 08:33:20 (1980): Status Report: Elapsed Time: '6000.000000'
2025-05-24 08:33:20 (1980): Status Report: CPU Time: '13155.375000'
2025-05-24 10:13:24 (1980): Status Report: Elapsed Time: '12000.000000'
2025-05-24 10:13:24 (1980): Status Report: CPU Time: '27642.812500'
2025-05-24 11:46:40 (1980): Guest Log:  *** Job finished ***
2025-05-24 11:46:40 (1980): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-24 11:46:40 (1980): Guest Log: 2025-05-24 15:46:27,850 | INFO     | [payload] run_realtimelog thread has finished
2025-05-24 11:46:40 (1980): Guest Log: 2025-05-24 15:46:28,588 | INFO     | [job] control thread has finished
2025-05-24 11:46:40 (1980): Guest Log: 2025-05-24 15:46:31,390 | INFO     | [data] queue_monitor thread has finished
2025-05-24 11:46:40 (1980): Guest Log: 2025-05-24 15:46:33,287 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140342824789824)>', '<ExcThread(monitor, started 140342082926336)>']
2025-05-24 11:46:40 (1980): Guest Log: 2025-05-24 15:46:33,315 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-24 11:46:40 (1980): Guest Log: 2025-05-24 15:46:33,315 | INFO     | [monitor] control thread has ended
2025-05-24 11:46:40 (1980): Guest Log: 2025-05-24 15:46:38,288 | INFO     | all workflow threads have been joined
2025-05-24 11:46:40 (1980): Guest Log: 2025-05-24 15:46:38,288 | INFO     | end of generic workflow (traces error code: 0)
2025-05-24 11:46:40 (1980): Guest Log: 2025-05-24 15:46:38,288 | INFO     | traces error code: 0
2025-05-24 11:46:40 (1980): Guest Log: 2025-05-24 15:46:38,288 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-24 11:46:40 (1980): Guest Log: 2025-05-24 15:46:38,360 [wrapper] ==== pilot stdout END ====
2025-05-24 11:46:40 (1980): Guest Log: 2025-05-24 15:46:38,364 [wrapper] ==== wrapper stdout RESUME ====
2025-05-24 11:46:40 (1980): Guest Log: 2025-05-24 15:46:38,369 [wrapper] pilotpid: 5931
2025-05-24 11:46:40 (1980): Guest Log: 2025-05-24 15:46:38,374 [wrapper] Pilot exit status: 0
2025-05-24 11:46:40 (1980): Guest Log: 2025-05-24 15:46:38,418 [wrapper] pandaids: 6665285089
2025-05-24 11:46:40 (1980): Guest Log: 2025-05-24 15:46:38,446 [wrapper] cleanup supervisor_pilot 17519 5932
2025-05-24 11:46:40 (1980): Guest Log: 2025-05-24 15:46:38,452 [wrapper] Test setup, not cleaning
2025-05-24 11:46:40 (1980): Guest Log: 2025-05-24 15:46:38,457 [wrapper] apfmon messages muted
2025-05-24 11:46:40 (1980): Guest Log: 2025-05-24 15:46:38,461 [wrapper] ==== wrapper stdout END ====
2025-05-24 11:46:40 (1980): Guest Log: 2025-05-24 15:46:38,465 [wrapper] ==== wrapper stderr END ====
2025-05-24 11:46:40 (1980): Guest Log:  *** Error codes and diagnostics ***
2025-05-24 11:46:40 (1980): Guest Log:     "exeErrorCode": 0,
2025-05-24 11:46:40 (1980): Guest Log:     "exeErrorDiag": "",
2025-05-24 11:46:40 (1980): Guest Log:     "pilotErrorCode": 0,
2025-05-24 11:46:40 (1980): Guest Log:     "pilotErrorDiag": "",
2025-05-24 11:46:40 (1980): Guest Log:  *** Listing of results directory ***
2025-05-24 11:46:40 (1980): Guest Log: total 208404
2025-05-24 11:46:40 (1980): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 24 07:50 pilot3.tar.gz
2025-05-24 11:46:40 (1980): Guest Log: -rwx------. 1 atlas atlas     37140 May 24 08:05 runpilot2-wrapper.sh
2025-05-24 11:46:40 (1980): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 24 08:05 queuedata.json
2025-05-24 11:46:40 (1980): Guest Log: -rwxr-xr-x. 1 atlas atlas     12280 May 24 10:53 init_data.xml
2025-05-24 11:46:40 (1980): Guest Log: -rwxr-xr-x. 1 atlas atlas    508870 May 24 10:53 input.tar.gz
2025-05-24 11:46:40 (1980): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 24 10:53 start_atlas.sh
2025-05-24 11:46:40 (1980): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 24 10:53 EVNT.44871834._000459.pool.root.1 -> /data/./ATLAS.root_0
2025-05-24 11:46:40 (1980): Guest Log: -rw-r--r--. 1 atlas atlas      2558 May 24 10:55 pandaJob.out
2025-05-24 11:46:40 (1980): Guest Log: -rw-------. 1 atlas atlas    988564 May 24 10:57 agis_schedconf.cvmfs.json
2025-05-24 11:46:40 (1980): Guest Log: drwx------. 4 atlas atlas      4096 May 24 10:57 pilot3
2025-05-24 11:46:40 (1980): Guest Log: -rw-------. 1 atlas atlas 206569864 May 24 15:45 HITS.44871837._011460.pool.root.1
2025-05-24 11:46:40 (1980): Guest Log: -rw-------. 1 atlas atlas      1034 May 24 15:45 memory_monitor_summary.json
2025-05-24 11:46:40 (1980): Guest Log: -rw-------. 1 atlas atlas        95 May 24 15:46 pilot_heartbeat.json
2025-05-24 11:46:40 (1980): Guest Log: -rw-------. 1 atlas atlas   1596740 May 24 15:46 agis_ddmendpoints.agis.ALL.json
2025-05-24 11:46:40 (1980): Guest Log: -rw-------. 1 atlas atlas    328457 May 24 15:46 log.44871837._011460.job.log.tgz.1
2025-05-24 11:46:40 (1980): Guest Log: -rw-------. 1 atlas atlas      7699 May 24 15:46 heartbeat.json
2025-05-24 11:46:40 (1980): Guest Log: -rw-------. 1 atlas atlas      4413 May 24 15:46 pilotlog.txt
2025-05-24 11:46:40 (1980): Guest Log: -rw-------. 1 atlas atlas   1207741 May 24 15:46 log.44871837._011460.job.log.1
2025-05-24 11:46:40 (1980): Guest Log: -rw-------. 1 atlas atlas       357 May 24 15:46 output.list
2025-05-24 11:46:40 (1980): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 24 15:46 runtime_log
2025-05-24 11:46:40 (1980): Guest Log: -rw-------. 1 atlas atlas   1556480 May 24 15:46 result.tar.gz
2025-05-24 11:46:40 (1980): Guest Log: -rw-r--r--. 1 atlas atlas      8553 May 24 15:46 runtime_log.err
2025-05-24 11:46:40 (1980): Guest Log: -rw-------. 1 atlas atlas       647 May 24 15:46 e1oLDmQ4yc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmpBMKDmfN1i3m.diag
2025-05-24 11:46:40 (1980): Guest Log: Looking for outputfile HITS.44871837._011460.pool.root.1
2025-05-24 11:46:40 (1980): Guest Log: HITS file was successfully produced
2025-05-24 11:46:40 (1980): Guest Log: -rw-------. 1 atlas atlas 206569864 May 24 15:45 /home/atlas/RunAtlas/HITS.44871837._011460.pool.root.1
2025-05-24 11:46:42 (1980): Guest Log: Successfully finished the ATLAS job!
2025-05-24 11:46:42 (1980): Guest Log: Copying the results back to the shared directory!
2025-05-24 11:46:42 (1980): Guest Log:  *** Contents of shared directory: ***
2025-05-24 11:46:42 (1980): Guest Log: total 426992
2025-05-24 11:46:42 (1980): Guest Log: -rwxrwxrwx. 1 root root 228567643 May 24 10:53 ATLAS.root_0
2025-05-24 11:46:42 (1980): Guest Log: -rwxrwxrwx. 1 root root 206569864 May 24 15:46 HITS.pool.root.1
2025-05-24 11:46:42 (1980): Guest Log: -rwxrwxrwx. 1 root root     12280 May 24 10:53 init_data.xml
2025-05-24 11:46:42 (1980): Guest Log: -rwxrwxrwx. 1 root root    508870 May 24 10:52 input.tar.gz
2025-05-24 11:46:42 (1980): Guest Log: -rwxrwxrwx. 1 root root   1556480 May 24 15:46 result.tar.gz
2025-05-24 11:46:42 (1980): Guest Log: -rwxrwxrwx. 1 root root     15093 May 24 10:52 start_atlas.sh
2025-05-24 11:46:42 (1980): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-24 11:46:42 (1980): VM Completion File Detected.
2025-05-24 11:46:42 (1980): Powering off VM.
2025-05-24 11:46:44 (1980): Successfully stopped VM.
2025-05-24 11:46:44 (1980): Deregistering VM. (boinc_1146a5e15fbe9021, slot#3)
2025-05-24 11:46:44 (1980): Removing network bandwidth throttle group from VM.
2025-05-24 11:46:44 (1980): Removing VM from VirtualBox.
11:46:50 (1980): called boinc_finish(0)

</stderr_txt>
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