Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:51:14 (306045): wrapper (7.7.26015): starting
06:51:14 (306045): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 06:51:14] Arguments: --nthreads 8
[2025-05-24 06:51:14] Threads: 8
[2025-05-24 06:51:14] Checking for CVMFS
[2025-05-24 06:51:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 06:51:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 06:51:15] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 06:51:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 06:51:16] 2.11.2.0 7082 12846 160780 146364 0 683 10329194 18432000 21521 130560 0 46631303 99.310 65632157 38594 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 06:51:16] CVMFS is ok
[2025-05-24 06:51:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 06:51:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 06:51:16] Further information can be found at the LHC@home message board.
[2025-05-24 06:51:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 06:51:16] Checking for apptainer binary...
[2025-05-24 06:51:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 06:51:16] Running /usr/bin/apptainer --version
[2025-05-24 06:51:16] apptainer version 1.3.2-1.el7
[2025-05-24 06:51:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 06:51:20] c-211-35-3.aglt2.org
[2025-05-24 06:51:20] apptainer works
[2025-05-24 06:51:20] Set ATHENA_PROC_NUMBER=8
[2025-05-24 06:51:20] Set ATHENA_CORE_NUMBER=8
[2025-05-24 06:51:20] Starting ATLAS job with PandaID=6665285175
[2025-05-24 06:51:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 13:18:38]  *** The last 200 lines of the pilot log: ***
[2025-05-24 13:18:38] 2025-05-24 17:18:17,922 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-24 13:18:38] 2025-05-24 17:18:17,922 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6665285175/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 13:18:38] 2025-05-24 17:18:17,923 | INFO     | extracted standard info from prmon json
[2025-05-24 13:18:38] 2025-05-24 17:18:17,923 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 13:18:38] 2025-05-24 17:18:17,923 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 13:18:38] 2025-05-24 17:18:17,924 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 13:18:38] 2025-05-24 17:18:17,924 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 13:18:38] 2025-05-24 17:18:17,939 | INFO     | fitting pss+swap vs Time
[2025-05-24 13:18:38] 2025-05-24 17:18:17,940 | INFO     | sum of square deviations: 16483183266.638235
[2025-05-24 13:18:38] 2025-05-24 17:18:17,948 | INFO     | sum of deviations: 305820746816.6813
[2025-05-24 13:18:38] 2025-05-24 17:18:17,948 | INFO     | mean x: 1748095556.7021277
[2025-05-24 13:18:38] 2025-05-24 17:18:17,948 | INFO     | mean y: 2412326.52393617
[2025-05-24 13:18:38] 2025-05-24 17:18:17,948 | INFO     | -- intersect: -32430879229.458378
[2025-05-24 13:18:38] 2025-05-24 17:18:17,948 | INFO     | intersect: -32430879229.458378
[2025-05-24 13:18:38] 2025-05-24 17:18:17,955 | INFO     | chi2: 8.29866586563223
[2025-05-24 13:18:38] 2025-05-24 17:18:17,956 | INFO     | sum of square deviations: 15834338466.431261
[2025-05-24 13:18:38] 2025-05-24 17:18:17,963 | INFO     | sum of deviations: 326736284436.89764
[2025-05-24 13:18:38] 2025-05-24 17:18:17,964 | INFO     | mean x: 1748095404.2048519
[2025-05-24 13:18:38] 2025-05-24 17:18:17,964 | INFO     | mean y: 2417176.501347709
[2025-05-24 13:18:38] 2025-05-24 17:18:17,964 | INFO     | -- intersect: -36068947498.567345
[2025-05-24 13:18:38] 2025-05-24 17:18:17,964 | INFO     | intersect: -36068947498.567345
[2025-05-24 13:18:38] 2025-05-24 17:18:17,965 | INFO     | chi2: 7.499447931122726
[2025-05-24 13:18:38] 2025-05-24 17:18:17,965 | INFO     | current chi2=7.499447931122726 (change=9.63067976768838 %)
[2025-05-24 13:18:38] 2025-05-24 17:18:17,965 | INFO     | right removable region: 370
[2025-05-24 13:18:38] 2025-05-24 17:18:17,965 | INFO     | sum of square deviations: 15834292106.431273
[2025-05-24 13:18:38] 2025-05-24 17:18:17,976 | INFO     | sum of deviations: 175406359132.41516
[2025-05-24 13:18:38] 2025-05-24 17:18:17,976 | INFO     | mean x: 1748095709.2048519
[2025-05-24 13:18:38] 2025-05-24 17:18:17,976 | INFO     | mean y: 2442965.547169811
[2025-05-24 13:18:38] 2025-05-24 17:18:17,977 | INFO     | -- intersect: -19362306762.802242
[2025-05-24 13:18:38] 2025-05-24 17:18:17,977 | INFO     | intersect: -19362306762.802242
[2025-05-24 13:18:38] 2025-05-24 17:18:17,977 | INFO     | chi2: 3.504381266730872
[2025-05-24 13:18:38] 2025-05-24 17:18:17,977 | INFO     | current chi2=3.504381266730872 (change=57.77175122517247 %)
[2025-05-24 13:18:38] 2025-05-24 17:18:17,978 | INFO     | sum of square deviations: 15202657083.718536
[2025-05-24 13:18:38] 2025-05-24 17:18:17,987 | INFO     | sum of deviations: 85718514998.57649
[2025-05-24 13:18:38] 2025-05-24 17:18:17,987 | INFO     | mean x: 1748095861.7076502
[2025-05-24 13:18:38] 2025-05-24 17:18:17,987 | INFO     | mean y: 2464589.4726775954
[2025-05-24 13:18:38] 2025-05-24 17:18:17,987 | INFO     | -- intersect: -9853982248.443182
[2025-05-24 13:18:38] 2025-05-24 17:18:17,987 | INFO     | intersect: -9853982248.443182
[2025-05-24 13:18:38] 2025-05-24 17:18:17,988 | INFO     | chi2: 1.3354822306977059
[2025-05-24 13:18:38] 2025-05-24 17:18:17,988 | INFO     | current chi2=1.3354822306977059 (change=61.89106923449755 %)
[2025-05-24 13:18:38] 2025-05-24 17:18:17,988 | INFO     | sum of square deviations: 14588090408.830936
[2025-05-24 13:18:38] 2025-05-24 17:18:17,996 | INFO     | sum of deviations: 49603397241.473724
[2025-05-24 13:18:38] 2025-05-24 17:18:17,996 | INFO     | mean x: 1748096014.204986
[2025-05-24 13:18:38] 2025-05-24 17:18:17,996 | INFO     | mean y: 2473543.736842105
[2025-05-24 13:18:38] 2025-05-24 17:18:17,996 | INFO     | -- intersect: -5941519026.8298855
[2025-05-24 13:18:38] 2025-05-24 17:18:17,996 | INFO     | intersect: -5941519026.8298855
[2025-05-24 13:18:38] 2025-05-24 17:18:18,001 | INFO     | chi2: 1.0256842984119101
[2025-05-24 13:18:38] 2025-05-24 17:18:18,002 | INFO     | current chi2=1.0256842984119101 (change=23.197458203838906 %)
[2025-05-24 13:18:38] 2025-05-24 17:18:18,002 | INFO     | left removable region: 30
[2025-05-24 13:18:38] 2025-05-24 17:18:18,002 | INFO     | sum of square deviations: 12187449193.326378
[2025-05-24 13:18:38] 2025-05-24 17:18:18,005 | INFO     | sum of deviations: 32918675486.764706
[2025-05-24 13:18:38] 2025-05-24 17:18:18,006 | INFO     | mean x: 1748096288.714706
[2025-05-24 13:18:38] 2025-05-24 17:18:18,006 | INFO     | mean y: 2490007.6470588236
[2025-05-24 13:18:38] 2025-05-24 17:18:18,012 | INFO     | -- intersect: -4719171886.896693
[2025-05-24 13:18:38] 2025-05-24 17:18:18,012 | INFO     | intersect: -4719171886.896693
[2025-05-24 13:18:38] 2025-05-24 17:18:18,013 | INFO     | chi2: 0.004308747465798318
[2025-05-24 13:18:38] 2025-05-24 17:18:18,013 | INFO     | -- intersect: -4719171886.896693
[2025-05-24 13:18:38] 2025-05-24 17:18:18,014 | INFO     | current memory leak: 2.70 B/s (using 340 data points, chi2=0.00)
[2025-05-24 13:18:38] 2025-05-24 17:18:18,014 | INFO     | ..............................
[2025-05-24 13:18:38] 2025-05-24 17:18:18,015 | INFO     | . Timing measurements:
[2025-05-24 13:18:38] 2025-05-24 17:18:18,015 | INFO     | . get job = 0 s
[2025-05-24 13:18:38] 2025-05-24 17:18:18,015 | INFO     | . initial setup = 5 s
[2025-05-24 13:18:38] 2025-05-24 17:18:18,015 | INFO     | . payload setup = 44 s
[2025-05-24 13:18:38] 2025-05-24 17:18:18,015 | INFO     | . stage-in = 0 s
[2025-05-24 13:18:38] 2025-05-24 17:18:18,015 | INFO     | . payload execution = 23002 s
[2025-05-24 13:18:38] 2025-05-24 17:18:18,015 | INFO     | . stage-out = 4 s
[2025-05-24 13:18:38] 2025-05-24 17:18:18,015 | INFO     | . log creation = 1 s
[2025-05-24 13:18:38] 2025-05-24 17:18:18,015 | INFO     | ..............................
[2025-05-24 13:18:38] 2025-05-24 17:18:18,319 | INFO     | 
[2025-05-24 13:18:38] 2025-05-24 17:18:18,319 | INFO     | job summary report
[2025-05-24 13:18:38] 2025-05-24 17:18:18,319 | INFO     | --------------------------------------------------
[2025-05-24 13:18:38] 2025-05-24 17:18:18,319 | INFO     | PanDA job id: 6665285175
[2025-05-24 13:18:38] 2025-05-24 17:18:18,319 | INFO     | task id: 44871837
[2025-05-24 13:18:38] 2025-05-24 17:18:18,319 | INFO     | errors: (none)
[2025-05-24 13:18:38] 2025-05-24 17:18:18,320 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 13:18:38] 2025-05-24 17:18:18,320 | INFO     | pilot state: finished 
[2025-05-24 13:18:38] 2025-05-24 17:18:18,320 | INFO     | transexitcode: 0
[2025-05-24 13:18:38] 2025-05-24 17:18:18,320 | INFO     | exeerrorcode: 0
[2025-05-24 13:18:38] 2025-05-24 17:18:18,320 | INFO     | exeerrordiag: 
[2025-05-24 13:18:38] 2025-05-24 17:18:18,320 | INFO     | exitcode: 0
[2025-05-24 13:18:38] 2025-05-24 17:18:18,320 | INFO     | exitmsg: OK
[2025-05-24 13:18:38] 2025-05-24 17:18:18,320 | INFO     | cpuconsumptiontime: 57208 s
[2025-05-24 13:18:38] 2025-05-24 17:18:18,320 | INFO     | nevents: 400
[2025-05-24 13:18:38] 2025-05-24 17:18:18,320 | INFO     | neventsw: 0
[2025-05-24 13:18:38] 2025-05-24 17:18:18,320 | INFO     | pid: 14966
[2025-05-24 13:18:38] 2025-05-24 17:18:18,320 | INFO     | pgrp: 14966
[2025-05-24 13:18:38] 2025-05-24 17:18:18,320 | INFO     | corecount: 8
[2025-05-24 13:18:38] 2025-05-24 17:18:18,320 | INFO     | event service: False
[2025-05-24 13:18:38] 2025-05-24 17:18:18,320 | INFO     | sizes: {0: 2393512, 1: 2393767, 2: 2393795, 13: 2393795, 23: 2393851, 25: 2394085, 34: 2394241, 23050: 2428639, 23055: 2437580, 23056: 2437636, 23091: 2437806}
[2025-05-24 13:18:38] 2025-05-24 17:18:18,320 | INFO     | --------------------------------------------------
[2025-05-24 13:18:38] 2025-05-24 17:18:18,320 | INFO     | 
[2025-05-24 13:18:38] 2025-05-24 17:18:18,321 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-05-24 13:18:38] 2025-05-24 17:18:18,546 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 13:18:38] 2025-05-24 17:18:18,547 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 13:18:38] 2025-05-24 17:18:18,547 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 13:18:38] 2025-05-24 17:18:18,547 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 13:18:38] 2025-05-24 17:18:18,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 13:18:38] 2025-05-24 17:18:18,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 13:18:38] 2025-05-24 17:18:18,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 13:18:38] 2025-05-24 17:18:18,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 13:18:38] 2025-05-24 17:18:18,547 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 13:18:38] 2025-05-24 17:18:18,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 13:18:38] 2025-05-24 17:18:18,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 13:18:38] 2025-05-24 17:18:18,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 13:18:38] 2025-05-24 17:18:18,547 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 13:18:38] 2025-05-24 17:18:18,547 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 13:18:38] 2025-05-24 17:18:18,547 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 13:18:38] 2025-05-24 17:18:18,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 13:18:38] 2025-05-24 17:18:18,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 13:18:38] 2025-05-24 17:18:18,560 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 13:18:38] 2025-05-24 17:18:18,560 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 13:18:38] 2025-05-24 17:18:18,560 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 13:18:38] 2025-05-24 17:18:18,560 | INFO     | job 6665285175 has completed (purged errors)
[2025-05-24 13:18:38] 2025-05-24 17:18:18,561 | INFO     | overall cleanup function is called
[2025-05-24 13:18:38] 2025-05-24 17:18:19,581 | INFO     | --- collectZombieJob: --- 10, [14966]
[2025-05-24 13:18:38] 2025-05-24 17:18:19,581 | INFO     | zombie collector waiting for pid 14966
[2025-05-24 13:18:38] 2025-05-24 17:18:19,581 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 13:18:38] 2025-05-24 17:18:19,581 | INFO     | collected zombie processes
[2025-05-24 13:18:38] 2025-05-24 17:18:19,581 | INFO     | will attempt to kill all subprocesses of pid=14966
[2025-05-24 13:18:38] 2025-05-24 17:18:20,991 | INFO     | process IDs to be killed: [14966] (in reverse order)
[2025-05-24 13:18:38] 2025-05-24 17:18:21,499 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 13:18:38] 2025-05-24 17:18:21,500 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 13:18:38] 2025-05-24 17:18:21,510 | INFO     | did not find any defunct processes belonging to 14966
[2025-05-24 13:18:38] 2025-05-24 17:18:21,520 | INFO     | did not find any defunct processes belonging to 14966
[2025-05-24 13:18:38] 2025-05-24 17:18:21,521 | INFO     | ready for new job
[2025-05-24 13:18:38] 2025-05-24 17:18:21,521 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 13:18:38] 2025-05-24 17:18:21,523 | INFO     | **************************************
[2025-05-24 13:18:38] 2025-05-24 17:18:21,523 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 13:18:38] 2025-05-24 17:18:21,523 | INFO     | **************************************
[2025-05-24 13:18:38] 2025-05-24 17:18:21,523 | INFO     | 
[2025-05-24 13:18:38] 2025-05-24 17:18:21,528 | INFO     | architecture information:
[2025-05-24 13:18:38] 2025-05-24 17:18:21,528 | INFO     | executing command: cat /etc/os-release
[2025-05-24 13:18:38] 2025-05-24 17:18:21,643 | INFO     | cat /etc/os-release:
[2025-05-24 13:18:38] NAME="CentOS Linux"
[2025-05-24 13:18:38] VERSION="7 (Core)"
[2025-05-24 13:18:38] ID="centos"
[2025-05-24 13:18:38] ID_LIKE="rhel fedora"
[2025-05-24 13:18:38] VERSION_ID="7"
[2025-05-24 13:18:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 13:18:38] ANSI_COLOR="0;31"
[2025-05-24 13:18:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 13:18:38] HOME_URL="https://www.centos.org/"
[2025-05-24 13:18:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 13:18:38] 
[2025-05-24 13:18:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 13:18:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 13:18:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 13:18:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 13:18:38] 
[2025-05-24 13:18:38] 2025-05-24 17:18:21,644 | INFO     | **************************************
[2025-05-24 13:18:38] 2025-05-24 17:18:22,147 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-05-24 13:18:38] 2025-05-24 17:18:22,318 | INFO     | sufficient remaining disk space (103660126208 B)
[2025-05-24 13:18:38] 2025-05-24 17:18:22,318 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 13:18:38] 2025-05-24 17:18:22,318 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 13:18:38] 2025-05-24 17:18:22,318 | INFO     | update_server=False
[2025-05-24 13:18:38] 2025-05-24 17:18:22,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 13:18:38] 2025-05-24 17:18:22,319 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 13:18:38] 2025-05-24 17:18:22,319 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 13:18:38] 2025-05-24 17:18:22,319 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 13:18:38] 2025-05-24 17:18:22,352 | INFO     | all payload control threads have been joined
[2025-05-24 13:18:38] 2025-05-24 17:18:22,432 | INFO     | all job control threads have been joined
[2025-05-24 13:18:38] 2025-05-24 17:18:22,528 | INFO     | all data control threads have been joined
[2025-05-24 13:18:38] 2025-05-24 17:18:22,561 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 13:18:38] 2025-05-24 17:18:22,561 | INFO     | aborting loop
[2025-05-24 13:18:38] 2025-05-24 17:18:23,326 | INFO     | [job] retrieve thread has finished
[2025-05-24 13:18:38] 2025-05-24 17:18:23,326 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 13:18:38] 2025-05-24 17:18:23,349 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 13:18:38] 2025-05-24 17:18:23,360 | INFO     | [payload] control thread has finished
[2025-05-24 13:18:38] 2025-05-24 17:18:23,438 | INFO     | [job] control thread has finished
[2025-05-24 13:18:38] 2025-05-24 17:18:23,534 | INFO     | [data] control thread has finished
[2025-05-24 13:18:38] 2025-05-24 17:18:23,567 | INFO     | [job] job monitor thread has finished
[2025-05-24 13:18:38] 2025-05-24 17:18:23,586 | INFO     | [data] copytool_in thread has finished
[2025-05-24 13:18:38] 2025-05-24 17:18:23,859 | INFO     | [payload] validate_post thread has finished
[2025-05-24 13:18:38] 2025-05-24 17:18:24,081 | INFO     | [job] validate thread has finished
[2025-05-24 13:18:38] 2025-05-24 17:18:24,108 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 13:18:38] 2025-05-24 17:18:24,111 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 13:18:38] 2025-05-24 17:18:24,115 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 13:18:38] 2025-05-24 17:18:24,187 | INFO     | [payload] failed_post thread has finished
[2025-05-24 13:18:38] 2025-05-24 17:18:24,355 | INFO     | [job] queue monitor thread has finished
[2025-05-24 13:18:38] 2025-05-24 17:18:24,547 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 13:18:38] 2025-05-24 17:18:25,333 | INFO     | [data] copytool_out thread has finished
[2025-05-24 13:18:38] 2025-05-24 17:18:25,721 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 13:18:38] 2025-05-24 17:18:29,730 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 13:18:38] 2025-05-24 17:18:30,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140100871440192)>', '<ExcThread(monitor, started 140100205795072)>']
[2025-05-24 13:18:38] 2025-05-24 17:18:30,368 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 13:18:38] 2025-05-24 17:18:30,368 | INFO     | [monitor] control thread has ended
[2025-05-24 13:18:38] 2025-05-24 17:18:35,332 | INFO     | all workflow threads have been joined
[2025-05-24 13:18:38] 2025-05-24 17:18:35,332 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 13:18:38] 2025-05-24 17:18:35,332 | INFO     | traces error code: 0
[2025-05-24 13:18:38] 2025-05-24 17:18:35,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 13:18:38] 2025-05-24 17:18:35,985 [wrapper] ==== pilot stdout END ====
[2025-05-24 13:18:38] 2025-05-24 17:18:36,016 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 13:18:38] 2025-05-24 17:18:36,062 [wrapper] pilotpid: 316751
[2025-05-24 13:18:38] 2025-05-24 17:18:36,093 [wrapper] Pilot exit status: 0
[2025-05-24 13:18:38] 2025-05-24 17:18:36,281 [wrapper] pandaids: 6665285175
[2025-05-24 13:18:38] 2025-05-24 17:18:36,859 [wrapper] cleanup supervisor_pilot 321286 316752
[2025-05-24 13:18:38] 2025-05-24 17:18:36,893 [wrapper] Test setup, not cleaning
[2025-05-24 13:18:38] 2025-05-24 17:18:36,927 [wrapper] apfmon messages muted
[2025-05-24 13:18:38] 2025-05-24 17:18:36,953 [wrapper] ==== wrapper stdout END ====
[2025-05-24 13:18:38] 2025-05-24 17:18:36,997 [wrapper] ==== wrapper stderr END ====
[2025-05-24 13:18:38]  *** Error codes and diagnostics ***
[2025-05-24 13:18:38]     "exeErrorCode": 0,
[2025-05-24 13:18:38]     "exeErrorDiag": "",
[2025-05-24 13:18:38]     "pilotErrorCode": 0,
[2025-05-24 13:18:38]     "pilotErrorDiag": "",
[2025-05-24 13:18:38]  *** Listing of results directory ***
[2025-05-24 13:18:38] total 427180
[2025-05-24 13:18:38] -rw-r--r-- 1 boincer umatlas    495897 May 24 03:50 pilot3.tar.gz
[2025-05-24 13:18:38] -rw-r--r-- 1 boincer umatlas      5111 May 24 04:05 queuedata.json
[2025-05-24 13:18:38] -rwx------ 1 boincer umatlas     37140 May 24 04:06 runpilot2-wrapper.sh
[2025-05-24 13:18:38] -rw-r--r-- 1 boincer umatlas       100 May 24 06:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 13:18:38] -rwxr-xr-x 1 boincer umatlas      7986 May 24 06:51 run_atlas
[2025-05-24 13:18:38] -rw-r--r-- 1 boincer umatlas       105 May 24 06:51 job.xml
[2025-05-24 13:18:38] -rw-r--r-- 2 boincer umatlas 228287425 May 24 06:51 EVNT.44871834._000462.pool.root.1
[2025-05-24 13:18:38] drwxrwx--x 2 boincer umatlas      4096 May 24 06:51 shared
[2025-05-24 13:18:38] -rw-r--r-- 2 boincer umatlas    508876 May 24 06:51 input.tar.gz
[2025-05-24 13:18:38] -rw-r--r-- 2 boincer umatlas     15093 May 24 06:51 start_atlas.sh
[2025-05-24 13:18:38] -rw-r--r-- 1 boincer umatlas         0 May 24 06:51 boinc_lockfile
[2025-05-24 13:18:38] -rw-r--r-- 1 boincer umatlas      2558 May 24 06:51 pandaJob.out
[2025-05-24 13:18:38] -rw------- 1 boincer umatlas    988564 May 24 06:52 agis_schedconf.cvmfs.json
[2025-05-24 13:18:38] drwx------ 4 boincer umatlas      4096 May 24 06:52 pilot3
[2025-05-24 13:18:38] -rw-r--r-- 1 boincer umatlas      6300 May 24 13:11 init_data.xml
[2025-05-24 13:18:38] -rw------- 1 boincer umatlas 200460906 May 24 13:16 HITS.44871837._011546.pool.root.1
[2025-05-24 13:18:38] -rw-r--r-- 1 boincer umatlas       530 May 24 13:16 boinc_task_state.xml
[2025-05-24 13:18:38] -rw------- 1 boincer umatlas        95 May 24 13:17 pilot_heartbeat.json
[2025-05-24 13:18:38] -rw------- 1 boincer umatlas      1059 May 24 13:17 memory_monitor_summary.json
[2025-05-24 13:18:38] -rw------- 1 boincer umatlas   1596740 May 24 13:17 agis_ddmendpoints.agis.ALL.json
[2025-05-24 13:18:38] -rw------- 1 boincer umatlas    485295 May 24 13:17 log.44871837._011546.job.log.tgz.1
[2025-05-24 13:18:38] -rw------- 1 boincer umatlas      7757 May 24 13:18 heartbeat.json
[2025-05-24 13:18:38] -rw-r--r-- 1 boincer umatlas      8192 May 24 13:18 boinc_mmap_file
[2025-05-24 13:18:38] -rw-r--r-- 1 boincer umatlas        28 May 24 13:18 wrapper_checkpoint.txt
[2025-05-24 13:18:38] -rw------- 1 boincer umatlas      4354 May 24 13:18 pilotlog.txt
[2025-05-24 13:18:38] -rw------- 1 boincer umatlas   1938388 May 24 13:18 log.44871837._011546.job.log.1
[2025-05-24 13:18:38] -rw------- 1 boincer umatlas       357 May 24 13:18 output.list
[2025-05-24 13:18:38] -rw-r--r-- 1 boincer umatlas       620 May 24 13:18 runtime_log
[2025-05-24 13:18:38] -rw------- 1 boincer umatlas   2447360 May 24 13:18 result.tar.gz
[2025-05-24 13:18:38] -rw-r--r-- 1 boincer umatlas      8670 May 24 13:18 runtime_log.err
[2025-05-24 13:18:38] -rw------- 1 boincer umatlas       664 May 24 13:18 2mdKDmX4yc7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdWQKDm0RMkFn.diag
[2025-05-24 13:18:38] -rw-r--r-- 1 boincer umatlas     20922 May 24 13:18 stderr.txt
[2025-05-24 13:18:38] HITS file was successfully produced:
[2025-05-24 13:18:38] -rw------- 1 boincer umatlas 200460906 May 24 13:16 shared/HITS.pool.root.1
[2025-05-24 13:18:38]  *** Contents of shared directory: ***
[2025-05-24 13:18:38] total 421616
[2025-05-24 13:18:38] -rw-r--r-- 2 boincer umatlas 228287425 May 24 06:51 ATLAS.root_0
[2025-05-24 13:18:38] -rw-r--r-- 2 boincer umatlas    508876 May 24 06:51 input.tar.gz
[2025-05-24 13:18:38] -rw-r--r-- 2 boincer umatlas     15093 May 24 06:51 start_atlas.sh
[2025-05-24 13:18:38] -rw------- 1 boincer umatlas 200460906 May 24 13:16 HITS.pool.root.1
[2025-05-24 13:18:38] -rw------- 1 boincer umatlas   2447360 May 24 13:18 result.tar.gz
13:18:39 (306045): run_atlas exited; CPU time 57934.224321
13:18:39 (306045): called boinc_finish(0)

</stderr_txt>
]]>

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