Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:43:49 (792812): wrapper (7.7.26015): starting
22:43:49 (792812): wrapper: running run_atlas (--nthreads 4)
[2025-05-26 22:43:49] Arguments: --nthreads 4
[2025-05-26 22:43:49] Threads: 4
[2025-05-26 22:43:49] Checking for CVMFS
[2025-05-26 22:43:49] No cvmfs_config command found, will try listing directly
[2025-05-26 22:43:49] CVMFS is ok
[2025-05-26 22:43:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-26 22:43:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-26 22:43:49] Further information can be found at the LHC@home message board.
[2025-05-26 22:43:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 22:43:49] Checking for apptainer binary...
[2025-05-26 22:43:49] which: no apptainer in ((null))
[2025-05-26 22:43:49] apptainer is not installed, using version from CVMFS
[2025-05-26 22:43:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 22:43:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2025-05-26 22:43:49] apptainer works
[2025-05-26 22:43:49] Set ATHENA_PROC_NUMBER=4
[2025-05-26 22:43:49] Set ATHENA_CORE_NUMBER=4
[2025-05-26 22:43:49] Starting ATLAS job with PandaID=6665274353
[2025-05-26 22:43:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 03:29:19]  *** The last 200 lines of the pilot log: ***
[2025-05-27 03:29:19] 2025-05-27 01:29:01,288 | INFO     | total number of processed events: 400 (read)
[2025-05-27 03:29:19] 2025-05-27 01:29:01,292 | INFO     | executing command: lscpu
[2025-05-27 03:29:19] 2025-05-27 01:29:01,350 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-27 03:29:19] 2025-05-27 01:29:02,153 | INFO     | monitor loop #1237: job 0:6665274353 is in state 'finished'
[2025-05-27 03:29:19] 2025-05-27 01:29:02,153 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-27 03:29:19] 2025-05-27 01:29:04,658 | INFO     | monitor loop #1238: job 0:6665274353 is in state 'finished'
[2025-05-27 03:29:19] 2025-05-27 01:29:04,658 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-27 03:29:19] 2025-05-27 01:29:05,783 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-27 03:29:19] 2025-05-27 01:29:05,784 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6665274353/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 03:29:19] 2025-05-27 01:29:05,785 | INFO     | extracted standard info from prmon json
[2025-05-27 03:29:19] 2025-05-27 01:29:05,785 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 03:29:19] 2025-05-27 01:29:05,785 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 03:29:19] 2025-05-27 01:29:05,786 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 03:29:19] 2025-05-27 01:29:05,786 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 03:29:19] 2025-05-27 01:29:05,793 | INFO     | fitting pss+swap vs Time
[2025-05-27 03:29:19] 2025-05-27 01:29:05,794 | INFO     | sum of square deviations: 6806862510.0
[2025-05-27 03:29:19] 2025-05-27 01:29:05,797 | INFO     | sum of deviations: -13509497430.999998
[2025-05-27 03:29:19] 2025-05-27 01:29:05,797 | INFO     | mean x: 1748300784.5
[2025-05-27 03:29:19] 2025-05-27 01:29:05,797 | INFO     | mean y: 2347160.0285714287
[2025-05-27 03:29:19] 2025-05-27 01:29:05,797 | INFO     | -- intersect: 3472178513.6249924
[2025-05-27 03:29:19] 2025-05-27 01:29:05,798 | INFO     | intersect: 3472178513.6249924
[2025-05-27 03:29:19] 2025-05-27 01:29:05,798 | INFO     | chi2: 1.8919933875300903
[2025-05-27 03:29:19] 2025-05-27 01:29:05,799 | INFO     | sum of square deviations: 6448679050.0
[2025-05-27 03:29:19] 2025-05-27 01:29:05,801 | INFO     | sum of deviations: -13363429209.999998
[2025-05-27 03:29:19] 2025-05-27 01:29:05,801 | INFO     | mean x: 1748300632.0
[2025-05-27 03:29:19] 2025-05-27 01:29:05,801 | INFO     | mean y: 2347222.2218181817
[2025-05-27 03:29:19] 2025-05-27 01:29:05,801 | INFO     | -- intersect: 3625304970.9921274
[2025-05-27 03:29:19] 2025-05-27 01:29:05,802 | INFO     | intersect: 3625304970.9921274
[2025-05-27 03:29:19] 2025-05-27 01:29:05,802 | INFO     | chi2: 1.8910821561749136
[2025-05-27 03:29:19] 2025-05-27 01:29:05,802 | INFO     | current chi2=1.8910821561749136 (change=0.04816250210928319 %)
[2025-05-27 03:29:19] 2025-05-27 01:29:05,802 | INFO     | right removable region: 274
[2025-05-27 03:29:19] 2025-05-27 01:29:05,803 | INFO     | sum of square deviations: 6448679050.0
[2025-05-27 03:29:19] 2025-05-27 01:29:05,805 | INFO     | sum of deviations: -54995911825.0
[2025-05-27 03:29:19] 2025-05-27 01:29:05,805 | INFO     | mean x: 1748300937.0
[2025-05-27 03:29:19] 2025-05-27 01:29:05,805 | INFO     | mean y: 2364683.112727273
[2025-05-27 03:29:19] 2025-05-27 01:29:05,806 | INFO     | -- intersect: 14912302583.467201
[2025-05-27 03:29:19] 2025-05-27 01:29:05,806 | INFO     | intersect: 14912302583.467201
[2025-05-27 03:29:19] 2025-05-27 01:29:05,806 | INFO     | chi2: 0.3694489501697403
[2025-05-27 03:29:19] 2025-05-27 01:29:05,806 | INFO     | current chi2=0.3694489501697403 (change=80.47303163928925 %)
[2025-05-27 03:29:19] 2025-05-27 01:29:05,807 | INFO     | sum of square deviations: 6103286527.5
[2025-05-27 03:29:19] 2025-05-27 01:29:05,809 | INFO     | sum of deviations: -45522098693.00001
[2025-05-27 03:29:19] 2025-05-27 01:29:05,809 | INFO     | mean x: 1748301089.5
[2025-05-27 03:29:19] 2025-05-27 01:29:05,809 | INFO     | mean y: 2360487.9111111113
[2025-05-27 03:29:19] 2025-05-27 01:29:05,810 | INFO     | -- intersect: 13042275029.478313
[2025-05-27 03:29:19] 2025-05-27 01:29:05,810 | INFO     | intersect: 13042275029.478313
[2025-05-27 03:29:19] 2025-05-27 01:29:05,810 | INFO     | chi2: 0.34514959714346977
[2025-05-27 03:29:19] 2025-05-27 01:29:05,810 | INFO     | current chi2=0.34514959714346977 (change=6.577188273266541 %)
[2025-05-27 03:29:19] 2025-05-27 01:29:05,811 | INFO     | left removable region: 20
[2025-05-27 03:29:19] 2025-05-27 01:29:05,811 | INFO     | sum of square deviations: 5081276667.5
[2025-05-27 03:29:19] 2025-05-27 01:29:05,813 | INFO     | sum of deviations: -19258894746.000004
[2025-05-27 03:29:19] 2025-05-27 01:29:05,813 | INFO     | mean x: 1748301211.5
[2025-05-27 03:29:19] 2025-05-27 01:29:05,813 | INFO     | mean y: 2348424.976377953
[2025-05-27 03:29:19] 2025-05-27 01:29:05,813 | INFO     | -- intersect: 6628704598.797687
[2025-05-27 03:29:19] 2025-05-27 01:29:05,814 | INFO     | intersect: 6628704598.797687
[2025-05-27 03:29:19] 2025-05-27 01:29:05,814 | INFO     | chi2: 0.21772532248535345
[2025-05-27 03:29:19] 2025-05-27 01:29:05,814 | INFO     | -- intersect: 6628704598.797687
[2025-05-27 03:29:19] 2025-05-27 01:29:05,814 | INFO     | current memory leak: -3.79 B/s (using 254 data points, chi2=0.22)
[2025-05-27 03:29:19] 2025-05-27 01:29:05,815 | INFO     | ..............................
[2025-05-27 03:29:19] 2025-05-27 01:29:05,815 | INFO     | . Timing measurements:
[2025-05-27 03:29:19] 2025-05-27 01:29:05,816 | INFO     | . get job = 0 s
[2025-05-27 03:29:19] 2025-05-27 01:29:05,816 | INFO     | . initial setup = 1 s
[2025-05-27 03:29:19] 2025-05-27 01:29:05,816 | INFO     | . payload setup = 9 s
[2025-05-27 03:29:19] 2025-05-27 01:29:05,816 | INFO     | . stage-in = 0 s
[2025-05-27 03:29:19] 2025-05-27 01:29:05,816 | INFO     | . payload execution = 17062 s
[2025-05-27 03:29:19] 2025-05-27 01:29:05,816 | INFO     | . stage-out = 1 s
[2025-05-27 03:29:19] 2025-05-27 01:29:05,816 | INFO     | . log creation = 0 s
[2025-05-27 03:29:19] 2025-05-27 01:29:05,817 | INFO     | ..............................
[2025-05-27 03:29:19] 2025-05-27 01:29:06,127 | INFO     | 
[2025-05-27 03:29:19] 2025-05-27 01:29:06,128 | INFO     | job summary report
[2025-05-27 03:29:19] 2025-05-27 01:29:06,128 | INFO     | --------------------------------------------------
[2025-05-27 03:29:19] 2025-05-27 01:29:06,128 | INFO     | PanDA job id: 6665274353
[2025-05-27 03:29:19] 2025-05-27 01:29:06,128 | INFO     | task id: 44871837
[2025-05-27 03:29:19] 2025-05-27 01:29:06,129 | INFO     | errors: (none)
[2025-05-27 03:29:19] 2025-05-27 01:29:06,129 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 03:29:19] 2025-05-27 01:29:06,129 | INFO     | pilot state: finished 
[2025-05-27 03:29:19] 2025-05-27 01:29:06,129 | INFO     | transexitcode: 0
[2025-05-27 03:29:19] 2025-05-27 01:29:06,129 | INFO     | exeerrorcode: 0
[2025-05-27 03:29:19] 2025-05-27 01:29:06,129 | INFO     | exeerrordiag: 
[2025-05-27 03:29:19] 2025-05-27 01:29:06,130 | INFO     | exitcode: 0
[2025-05-27 03:29:19] 2025-05-27 01:29:06,130 | INFO     | exitmsg: OK
[2025-05-27 03:29:19] 2025-05-27 01:29:06,130 | INFO     | cpuconsumptiontime: 64758 s
[2025-05-27 03:29:19] 2025-05-27 01:29:06,130 | INFO     | nevents: 400
[2025-05-27 03:29:19] 2025-05-27 01:29:06,130 | INFO     | neventsw: 0
[2025-05-27 03:29:19] 2025-05-27 01:29:06,130 | INFO     | pid: 803324
[2025-05-27 03:29:19] 2025-05-27 01:29:06,131 | INFO     | pgrp: 803324
[2025-05-27 03:29:19] 2025-05-27 01:29:06,131 | INFO     | corecount: 4
[2025-05-27 03:29:19] 2025-05-27 01:29:06,131 | INFO     | event service: False
[2025-05-27 03:29:19] 2025-05-27 01:29:06,131 | INFO     | sizes: {0: 2405068, 1: 2405267, 6: 2405473, 12: 2405501, 17075: 2437036, 17078: 2445999, 17079: 2446183, 17087: 2446353}
[2025-05-27 03:29:19] 2025-05-27 01:29:06,131 | INFO     | --------------------------------------------------
[2025-05-27 03:29:19] 2025-05-27 01:29:06,132 | INFO     | 
[2025-05-27 03:29:19] 2025-05-27 01:29:06,132 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-05-27 03:29:19] 2025-05-27 01:29:06,156 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 03:29:19] 2025-05-27 01:29:06,156 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 03:29:19] 2025-05-27 01:29:06,156 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 03:29:19] 2025-05-27 01:29:06,157 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 03:29:19] 2025-05-27 01:29:06,157 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 03:29:19] 2025-05-27 01:29:06,157 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 03:29:19] 2025-05-27 01:29:06,157 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 03:29:19] 2025-05-27 01:29:06,157 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 03:29:19] 2025-05-27 01:29:06,158 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 03:29:19] 2025-05-27 01:29:06,158 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 03:29:19] 2025-05-27 01:29:06,158 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 03:29:19] 2025-05-27 01:29:06,158 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 03:29:19] 2025-05-27 01:29:06,159 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 03:29:19] 2025-05-27 01:29:06,159 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 03:29:19] 2025-05-27 01:29:06,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 03:29:19] 2025-05-27 01:29:06,159 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 03:29:19] 2025-05-27 01:29:06,159 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 03:29:19] 2025-05-27 01:29:06,160 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 03:29:19] 2025-05-27 01:29:06,160 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 03:29:19] 2025-05-27 01:29:06,160 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 03:29:19] 2025-05-27 01:29:06,160 | INFO     | job 6665274353 has completed (purged errors)
[2025-05-27 03:29:19] 2025-05-27 01:29:06,161 | INFO     | overall cleanup function is called
[2025-05-27 03:29:19] 2025-05-27 01:29:07,169 | INFO     | --- collectZombieJob: --- 10, [803324]
[2025-05-27 03:29:19] 2025-05-27 01:29:07,170 | INFO     | zombie collector waiting for pid 803324
[2025-05-27 03:29:19] 2025-05-27 01:29:07,170 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 03:29:19] 2025-05-27 01:29:07,170 | INFO     | collected zombie processes
[2025-05-27 03:29:19] 2025-05-27 01:29:07,170 | INFO     | will attempt to kill all subprocesses of pid=803324
[2025-05-27 03:29:19] 2025-05-27 01:29:07,484 | INFO     | process IDs to be killed: [803324] (in reverse order)
[2025-05-27 03:29:19] 2025-05-27 01:29:07,597 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 03:29:19] 2025-05-27 01:29:07,597 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 03:29:19] 2025-05-27 01:29:07,606 | INFO     | did not find any defunct processes belonging to 803324
[2025-05-27 03:29:19] 2025-05-27 01:29:07,614 | INFO     | did not find any defunct processes belonging to 803324
[2025-05-27 03:29:19] 2025-05-27 01:29:07,614 | INFO     | ready for new job
[2025-05-27 03:29:19] 2025-05-27 01:29:07,614 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 03:29:19] 2025-05-27 01:29:07,617 | INFO     | **************************************
[2025-05-27 03:29:19] 2025-05-27 01:29:07,617 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 03:29:19] 2025-05-27 01:29:07,617 | INFO     | **************************************
[2025-05-27 03:29:19] 2025-05-27 01:29:07,617 | INFO     | 
[2025-05-27 03:29:19] 2025-05-27 01:29:07,620 | INFO     | architecture information:
[2025-05-27 03:29:19] 2025-05-27 01:29:07,621 | INFO     | executing command: cat /etc/os-release
[2025-05-27 03:29:19] 2025-05-27 01:29:07,638 | INFO     | cat /etc/os-release:
[2025-05-27 03:29:19] NAME="CentOS Linux"
[2025-05-27 03:29:19] VERSION="7 (Core)"
[2025-05-27 03:29:19] ID="centos"
[2025-05-27 03:29:19] ID_LIKE="rhel fedora"
[2025-05-27 03:29:19] VERSION_ID="7"
[2025-05-27 03:29:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 03:29:19] ANSI_COLOR="0;31"
[2025-05-27 03:29:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 03:29:19] HOME_URL="https://www.centos.org/"
[2025-05-27 03:29:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 03:29:19] 
[2025-05-27 03:29:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 03:29:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 03:29:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 03:29:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 03:29:19] 
[2025-05-27 03:29:19] 2025-05-27 01:29:07,638 | INFO     | **************************************
[2025-05-27 03:29:19] 2025-05-27 01:29:08,140 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-05-27 03:29:19] 2025-05-27 01:29:08,155 | INFO     | sufficient remaining disk space (1665343160320 B)
[2025-05-27 03:29:19] 2025-05-27 01:29:08,155 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 03:29:19] 2025-05-27 01:29:08,156 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 03:29:19] 2025-05-27 01:29:08,156 | INFO     | update_server=False
[2025-05-27 03:29:19] 2025-05-27 01:29:08,156 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 03:29:19] 2025-05-27 01:29:08,156 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-27 03:29:19] 2025-05-27 01:29:08,157 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 03:29:19] 2025-05-27 01:29:08,157 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 03:29:19] 2025-05-27 01:29:08,157 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 03:29:19] 2025-05-27 01:29:08,157 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 03:29:19] 2025-05-27 01:29:08,165 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 03:29:19] 2025-05-27 01:29:08,166 | INFO     | aborting loop
[2025-05-27 03:29:19] 2025-05-27 01:29:08,303 | INFO     | all data control threads have been joined
[2025-05-27 03:29:19] 2025-05-27 01:29:08,612 | INFO     | all payload control threads have been joined
[2025-05-27 03:29:19] 2025-05-27 01:29:08,811 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 03:29:19] 2025-05-27 01:29:09,162 | INFO     | [job] retrieve thread has finished
[2025-05-27 03:29:19] 2025-05-27 01:29:09,171 | INFO     | [job] job monitor thread has finished
[2025-05-27 03:29:19] 2025-05-27 01:29:09,309 | INFO     | [data] control thread has finished
[2025-05-27 03:29:19] 2025-05-27 01:29:09,408 | INFO     | all job control threads have been joined
[2025-05-27 03:29:19] 2025-05-27 01:29:09,541 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 03:29:19] 2025-05-27 01:29:09,617 | INFO     | [payload] control thread has finished
[2025-05-27 03:29:19] 2025-05-27 01:29:09,666 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 03:29:19] 2025-05-27 01:29:09,765 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 03:29:19] 2025-05-27 01:29:09,846 | INFO     | [payload] validate_post thread has finished
[2025-05-27 03:29:19] 2025-05-27 01:29:09,903 | INFO     | [data] copytool_in thread has finished
[2025-05-27 03:29:19] 2025-05-27 01:29:10,074 | INFO     | [payload] failed_post thread has finished
[2025-05-27 03:29:19] 2025-05-27 01:29:10,163 | INFO     | [data] copytool_out thread has finished
[2025-05-27 03:29:19] 2025-05-27 01:29:10,271 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 03:29:19] 2025-05-27 01:29:10,412 | INFO     | [job] control thread has finished
[2025-05-27 03:29:19] 2025-05-27 01:29:10,422 | INFO     | [job] validate thread has finished
[2025-05-27 03:29:19] 2025-05-27 01:29:10,950 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 03:29:19] 2025-05-27 01:29:11,955 | INFO     | [job] queue monitor thread has finished
[2025-05-27 03:29:19] 2025-05-27 01:29:12,817 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 03:29:19] 2025-05-27 01:29:14,220 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23076020053824)>', '<ExcThread(monitor, started 23075577906944)>']
[2025-05-27 03:29:19] 2025-05-27 01:29:15,192 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 03:29:19] 2025-05-27 01:29:15,193 | INFO     | [monitor] control thread has ended
[2025-05-27 03:29:19] 2025-05-27 01:29:19,245 | INFO     | all workflow threads have been joined
[2025-05-27 03:29:19] 2025-05-27 01:29:19,246 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 03:29:19] 2025-05-27 01:29:19,246 | INFO     | traces error code: 0
[2025-05-27 03:29:19] 2025-05-27 01:29:19,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 03:29:19] 2025-05-27 01:29:19,404 [wrapper] ==== pilot stdout END ====
[2025-05-27 03:29:19] 2025-05-27 01:29:19,408 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 03:29:19] 2025-05-27 01:29:19,411 [wrapper] pilotpid: 796394
[2025-05-27 03:29:19] 2025-05-27 01:29:19,414 [wrapper] Pilot exit status: 0
[2025-05-27 03:29:19] 2025-05-27 01:29:19,427 [wrapper] pandaids: 6665274353
[2025-05-27 03:29:19] 2025-05-27 01:29:19,476 [wrapper] cleanup supervisor_pilot 1293641 796395
[2025-05-27 03:29:19] 2025-05-27 01:29:19,479 [wrapper] Test setup, not cleaning
[2025-05-27 03:29:19] 2025-05-27 01:29:19,482 [wrapper] apfmon messages muted
[2025-05-27 03:29:19] 2025-05-27 01:29:19,485 [wrapper] ==== wrapper stdout END ====
[2025-05-27 03:29:19] 2025-05-27 01:29:19,488 [wrapper] ==== wrapper stderr END ====
[2025-05-27 03:29:19]  *** Error codes and diagnostics ***
[2025-05-27 03:29:19]     "exeErrorCode": 0,
[2025-05-27 03:29:19]     "exeErrorDiag": "",
[2025-05-27 03:29:19]     "pilotErrorCode": 0,
[2025-05-27 03:29:19]     "pilotErrorDiag": "",
[2025-05-27 03:29:19]  *** Listing of results directory ***
[2025-05-27 03:29:19] total 420756
[2025-05-27 03:29:19] -rw-r--r-- 1 boinc boinc    495897 May 24 08:34 pilot3.tar.gz
[2025-05-27 03:29:19] -rwx------ 1 boinc boinc     37140 May 24 08:37 runpilot2-wrapper.sh
[2025-05-27 03:29:19] -rw-r--r-- 1 boinc boinc      5111 May 24 08:37 queuedata.json
[2025-05-27 03:29:19] -rw-r--r-- 1 boinc boinc       100 May 26 22:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 03:29:19] -rwxr-xr-x 1 boinc boinc      7986 May 26 22:43 run_atlas
[2025-05-27 03:29:19] -rw-r--r-- 1 boinc boinc       105 May 26 22:43 job.xml
[2025-05-27 03:29:19] -rw-r--r-- 1 boinc boinc      6422 May 26 22:43 init_data.xml
[2025-05-27 03:29:19] -rw-r--r-- 2 boinc boinc 225194342 May 26 22:43 EVNT.44871834._000319.pool.root.1
[2025-05-27 03:29:19] -rw-r--r-- 2 boinc boinc     15093 May 26 22:43 start_atlas.sh
[2025-05-27 03:29:19] drwxrwx--x 2 boinc boinc      4096 May 26 22:43 shared
[2025-05-27 03:29:19] -rw-r--r-- 2 boinc boinc    508869 May 26 22:43 input.tar.gz
[2025-05-27 03:29:19] -rw-r--r-- 1 boinc boinc         0 May 26 22:43 boinc_lockfile
[2025-05-27 03:29:19] -rw-r--r-- 1 boinc boinc      2556 May 26 22:43 pandaJob.out
[2025-05-27 03:29:19] -rw------- 1 boinc boinc    990402 May 26 22:44 agis_schedconf.cvmfs.json
[2025-05-27 03:29:19] drwx------ 4 boinc boinc      4096 May 26 22:44 pilot3
[2025-05-27 03:29:19] -rw-r--r-- 1 boinc boinc       530 May 27 03:28 boinc_task_state.xml
[2025-05-27 03:29:19] -rw------- 1 boinc boinc 197975057 May 27 03:28 HITS.44871837._007957.pool.root.1
[2025-05-27 03:29:19] -rw------- 1 boinc boinc        95 May 27 03:28 pilot_heartbeat.json
[2025-05-27 03:29:19] -rw------- 1 boinc boinc      1032 May 27 03:28 memory_monitor_summary.json
[2025-05-27 03:29:19] -rw------- 1 boinc boinc   1603667 May 27 03:28 agis_ddmendpoints.agis.ALL.json
[2025-05-27 03:29:19] -rw------- 1 boinc boinc    351991 May 27 03:28 log.44871837._007957.job.log.tgz.1
[2025-05-27 03:29:19] -rw------- 1 boinc boinc      7720 May 27 03:29 heartbeat.json
[2025-05-27 03:29:19] -rw-r--r-- 1 boinc boinc        28 May 27 03:29 wrapper_checkpoint.txt
[2025-05-27 03:29:19] -rw-r--r-- 1 boinc boinc      8192 May 27 03:29 boinc_mmap_file
[2025-05-27 03:29:19] -rw------- 1 boinc boinc      4487 May 27 03:29 pilotlog.txt
[2025-05-27 03:29:19] -rw------- 1 boinc boinc   1571135 May 27 03:29 log.44871837._007957.job.log.1
[2025-05-27 03:29:19] -rw------- 1 boinc boinc       357 May 27 03:29 output.list
[2025-05-27 03:29:19] -rw-r--r-- 1 boinc boinc       620 May 27 03:29 runtime_log
[2025-05-27 03:29:19] -rw------- 1 boinc boinc   1945600 May 27 03:29 result.tar.gz
[2025-05-27 03:29:19] -rw-r--r-- 1 boinc boinc      9026 May 27 03:29 runtime_log.err
[2025-05-27 03:29:19] -rw------- 1 boinc boinc       665 May 27 03:29 EyrMDmQgxc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmLnLKDmajemym.diag
[2025-05-27 03:29:19] -rw-r--r-- 1 boinc boinc     20934 May 27 03:29 stderr.txt
[2025-05-27 03:29:19] HITS file was successfully produced:
[2025-05-27 03:29:19] -rw------- 1 boinc boinc 197975057 May 27 03:28 shared/HITS.pool.root.1
[2025-05-27 03:29:19]  *** Contents of shared directory: ***
[2025-05-27 03:29:19] total 415676
[2025-05-27 03:29:19] -rw-r--r-- 2 boinc boinc 225194342 May 26 22:43 ATLAS.root_0
[2025-05-27 03:29:19] -rw-r--r-- 2 boinc boinc     15093 May 26 22:43 start_atlas.sh
[2025-05-27 03:29:19] -rw-r--r-- 2 boinc boinc    508869 May 26 22:43 input.tar.gz
[2025-05-27 03:29:19] -rw------- 1 boinc boinc 197975057 May 27 03:28 HITS.pool.root.1
[2025-05-27 03:29:19] -rw------- 1 boinc boinc   1945600 May 27 03:29 result.tar.gz
03:29:20 (792812): run_atlas exited; CPU time 65409.396851
03:29:20 (792812): called boinc_finish(0)

</stderr_txt>
]]>

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