Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-24 11:39:44 (1121773): Detected: vboxwrapper 26206
2025-05-24 11:39:44 (1121773): Detected: BOINC client v8.2.2
2025-05-24 11:39:44 (1121773): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2025-05-24 11:39:44 (1121773): Successfully copied 'init_data.xml' to the shared directory.
2025-05-24 11:39:44 (1121773): Create VM. (boinc_41fe5bb7a2cf337b, slot#8)
2025-05-24 11:39:44 (1121773): Setting Memory Size for VM. (4096MB)
2025-05-24 11:39:44 (1121773): Setting CPU Count for VM. (1)
2025-05-24 11:39:44 (1121773): Setting Chipset Options for VM.
2025-05-24 11:39:44 (1121773): Setting Graphics Controller Options for VM.
2025-05-24 11:39:45 (1121773): Setting Boot Options for VM.
2025-05-24 11:39:45 (1121773): Setting Network Configuration for NAT.
2025-05-24 11:39:45 (1121773): Enabling VM Network Access.
2025-05-24 11:39:45 (1121773): Disabling USB Support for VM.
2025-05-24 11:39:45 (1121773): Disabling COM Port Support for VM.
2025-05-24 11:39:45 (1121773): Disabling LPT Port Support for VM.
2025-05-24 11:39:45 (1121773): Disabling Audio Support for VM.
2025-05-24 11:39:45 (1121773): Disabling Clipboard Support for VM.
2025-05-24 11:39:45 (1121773): Disabling Drag and Drop Support for VM.
2025-05-24 11:39:45 (1121773): Adding storage controller(s) to VM.
2025-05-24 11:39:45 (1121773): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-24 11:39:46 (1121773): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-24 11:39:46 (1121773): forwarding host port 56503 to guest port 80
2025-05-24 11:39:46 (1121773): Enabling remote desktop for VM.
2025-05-24 11:39:46 (1121773): Enabling shared directory for VM.
2025-05-24 11:39:46 (1121773): Starting VM using VBoxManage interface. (boinc_41fe5bb7a2cf337b, slot#8)
2025-05-24 11:39:47 (1121773): Successfully started VM. (PID = '1122169')
2025-05-24 11:39:47 (1121773): Reporting VM Process ID to BOINC.
2025-05-24 11:39:47 (1121773): Guest Log: BIOS: VirtualBox 7.0.20
2025-05-24 11:39:47 (1121773): Guest Log: CPUID EDX: 0x178bfbff
2025-05-24 11:39:47 (1121773): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-24 11:39:47 (1121773): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-24 11:39:47 (1121773): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-24 11:39:47 (1121773): Detected: Web Application Enabled (http://localhost:56503)
2025-05-24 11:39:47 (1121773): Detected: Remote Desktop Enabled (localhost:50687)
2025-05-24 11:39:47 (1121773): Preference change detected
2025-05-24 11:39:47 (1121773): Setting CPU throttle for VM. (100%)
2025-05-24 11:39:47 (1121773): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-24 11:39:49 (1121773): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-24 11:39:49 (1121773): Guest Log: BIOS: Booting from Hard Disk...
2025-05-24 11:39:52 (1121773): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-24 11:39:52 (1121773): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-24 11:39:52 (1121773): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-24 11:39:57 (1121773): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-24 11:39:57 (1121773): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-24 11:40:08 (1121773): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-24 11:40:08 (1121773): Guest Log: 00:00:00.000218 main     Log opened 2025-05-24T09:40:06.467461000Z
2025-05-24 11:40:08 (1121773): Guest Log: 00:00:00.000417 main     OS Product: Linux
2025-05-24 11:40:08 (1121773): Guest Log: 00:00:00.000499 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-24 11:40:08 (1121773): Guest Log: 00:00:00.000573 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-24 11:40:08 (1121773): Guest Log: 00:00:00.000633 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-24 11:40:08 (1121773): Guest Log: 00:00:00.000634 main     Process ID: 1245
2025-05-24 11:40:08 (1121773): Guest Log: 00:00:00.000635 main     Package type: LINUX_64BITS_GENERIC
2025-05-24 11:40:08 (1121773): Guest Log: 00:00:00.002958 main     5.2.32 r132073 started. Verbose level = 0
2025-05-24 11:40:08 (1121773): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-24 11:40:08 (1121773): Guest Log: [INFO] Mounting shared directory
2025-05-24 11:40:08 (1121773): Guest Log: [INFO] Checking for init_data.xml
2025-05-24 11:40:10 (1121773): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-24 11:40:10 (1121773): Guest Log: [INFO] Detected branch: prod
2025-05-24 11:40:11 (1121773): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-24 11:40:11 (1121773): Guest Log: Copying input files
2025-05-24 11:40:12 (1121773): Guest Log: Copied input files into RunAtlas.
2025-05-24 11:40:12 (1121773): Guest Log: Detected user-configured HTTP proxy at http://localhost:3128 - will set in /etc/cvmfs/default.local
2025-05-24 11:41:24 (1121773): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-24 11:41:24 (1121773): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-24 11:41:24 (1121773): Guest Log: 2.6.3.0 1515 1 29552 146362 3 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
2025-05-24 11:41:25 (1121773): Guest Log: copied the webapp to /var/www
2025-05-24 11:41:25 (1121773): Guest Log: core_number=1
2025-05-24 11:41:25 (1121773): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-24 11:41:25 (1121773): Guest Log:  *** Starting ATLAS job. (PandaID=6665279061 taskID=44871837) ***
2025-05-24 13:18:48 (1121773): Status Report: Elapsed Time: '6000.000000'
2025-05-24 13:18:48 (1121773): Status Report: CPU Time: '5738.940000'
2025-05-24 14:57:49 (1121773): Status Report: Elapsed Time: '12000.000000'
2025-05-24 14:57:49 (1121773): Status Report: CPU Time: '11687.830000'
2025-05-24 16:36:49 (1121773): Status Report: Elapsed Time: '18000.000000'
2025-05-24 16:36:49 (1121773): Status Report: CPU Time: '17636.850000'
2025-05-24 18:15:50 (1121773): Status Report: Elapsed Time: '24000.000000'
2025-05-24 18:15:50 (1121773): Status Report: CPU Time: '23587.030000'
2025-05-24 19:54:50 (1121773): Status Report: Elapsed Time: '30000.000000'
2025-05-24 19:54:50 (1121773): Status Report: CPU Time: '29535.970000'
2025-05-24 21:33:51 (1121773): Status Report: Elapsed Time: '36000.000000'
2025-05-24 21:33:51 (1121773): Status Report: CPU Time: '35484.900000'
2025-05-24 22:22:24 (1121773): Guest Log:  *** Job finished ***
2025-05-24 22:22:24 (1121773): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-24 22:22:24 (1121773): Guest Log: 2025-05-24 20:22:13,714 | INFO     | [data] queue_monitor thread has finished
2025-05-24 22:22:24 (1121773): Guest Log: 2025-05-24 20:22:17,156 | INFO     | job.realtimelogging is not enabled
2025-05-24 22:22:24 (1121773): Guest Log: 2025-05-24 20:22:18,158 | INFO     | [payload] run_realtimelog thread has finished
2025-05-24 22:22:24 (1121773): Guest Log: 2025-05-24 20:22:18,727 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140336423335744)>', '<ExcThread(monitor, started 140335766300416)>']
2025-05-24 22:22:24 (1121773): Guest Log: 2025-05-24 20:22:19,723 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-24 22:22:24 (1121773): Guest Log: 2025-05-24 20:22:19,723 | INFO     | [monitor] control thread has ended
2025-05-24 22:22:24 (1121773): Guest Log: 2025-05-24 20:22:23,733 | INFO     | all workflow threads have been joined
2025-05-24 22:22:24 (1121773): Guest Log: 2025-05-24 20:22:23,733 | INFO     | end of generic workflow (traces error code: 0)
2025-05-24 22:22:24 (1121773): Guest Log: 2025-05-24 20:22:23,733 | INFO     | traces error code: 0
2025-05-24 22:22:24 (1121773): Guest Log: 2025-05-24 20:22:23,733 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-24 22:22:24 (1121773): Guest Log: 2025-05-24 20:22:23,857 [wrapper] ==== pilot stdout END ====
2025-05-24 22:22:24 (1121773): Guest Log: 2025-05-24 20:22:23,862 [wrapper] ==== wrapper stdout RESUME ====
2025-05-24 22:22:24 (1121773): Guest Log: 2025-05-24 20:22:23,867 [wrapper] pilotpid: 5786
2025-05-24 22:22:24 (1121773): Guest Log: 2025-05-24 20:22:23,872 [wrapper] Pilot exit status: 0
2025-05-24 22:22:24 (1121773): Guest Log: 2025-05-24 20:22:24,025 [wrapper] pandaids: 6665279061
2025-05-24 22:22:24 (1121773): Guest Log: 2025-05-24 20:22:24,056 [wrapper] cleanup supervisor_pilot 18894 5787
2025-05-24 22:22:24 (1121773): Guest Log: 2025-05-24 20:22:24,062 [wrapper] Test setup, not cleaning
2025-05-24 22:22:24 (1121773): Guest Log: 2025-05-24 20:22:24,068 [wrapper] apfmon messages muted
2025-05-24 22:22:24 (1121773): Guest Log: 2025-05-24 20:22:24,073 [wrapper] ==== wrapper stdout END ====
2025-05-24 22:22:24 (1121773): Guest Log: 2025-05-24 20:22:24,078 [wrapper] ==== wrapper stderr END ====
2025-05-24 22:22:24 (1121773): Guest Log:  *** Error codes and diagnostics ***
2025-05-24 22:22:24 (1121773): Guest Log:     "exeErrorCode": 0,
2025-05-24 22:22:24 (1121773): Guest Log:     "exeErrorDiag": "",
2025-05-24 22:22:24 (1121773): Guest Log:     "pilotErrorCode": 0,
2025-05-24 22:22:24 (1121773): Guest Log:     "pilotErrorDiag": "",
2025-05-24 22:22:24 (1121773): Guest Log:  *** Listing of results directory ***
2025-05-24 22:22:24 (1121773): Guest Log: total 203504
2025-05-24 22:22:24 (1121773): Guest Log: -rw-r--r--. 1 atlas atlas    503527 Apr  3 07:42 pilot3.tar.gz
2025-05-24 22:22:24 (1121773): Guest Log: -rwx------. 1 atlas atlas     37140 May 24 07:21 runpilot2-wrapper.sh
2025-05-24 22:22:24 (1121773): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 24 07:21 queuedata.json
2025-05-24 22:22:24 (1121773): Guest Log: -rw-r--r--. 1 atlas atlas      9817 May 24 09:40 init_data.xml
2025-05-24 22:22:24 (1121773): Guest Log: -rw-r--r--. 1 atlas atlas    517087 May 24 09:40 input.tar.gz
2025-05-24 22:22:24 (1121773): Guest Log: -rw-r--r--. 1 atlas atlas     15093 May 24 09:40 start_atlas.sh
2025-05-24 22:22:24 (1121773): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 24 09:40 EVNT.44871834._000396.pool.root.1 -> /data/./ATLAS.root_0
2025-05-24 22:22:24 (1121773): Guest Log: -rw-r--r--. 1 atlas atlas      2555 May 24 09:41 pandaJob.out
2025-05-24 22:22:24 (1121773): Guest Log: -rw-------. 1 atlas atlas    988596 May 24 09:42 agis_schedconf.cvmfs.json
2025-05-24 22:22:24 (1121773): Guest Log: drwx------. 4 atlas atlas      4096 May 24 09:43 pilot3
2025-05-24 22:22:24 (1121773): Guest Log: -rw-------. 1 atlas atlas 197070024 May 24 20:20 HITS.44871837._009881.pool.root.1
2025-05-24 22:22:24 (1121773): Guest Log: -rw-------. 1 atlas atlas        95 May 24 20:21 pilot_heartbeat.json
2025-05-24 22:22:24 (1121773): Guest Log: -rw-------. 1 atlas atlas      1022 May 24 20:21 memory_monitor_summary.json
2025-05-24 22:22:24 (1121773): Guest Log: -rw-------. 1 atlas atlas   1596740 May 24 20:21 agis_ddmendpoints.agis.ALL.json
2025-05-24 22:22:24 (1121773): Guest Log: -rw-------. 1 atlas atlas    490214 May 24 20:21 log.44871837._009881.job.log.tgz.1
2025-05-24 22:22:24 (1121773): Guest Log: -rw-------. 1 atlas atlas      7702 May 24 20:22 heartbeat.json
2025-05-24 22:22:24 (1121773): Guest Log: -rw-------. 1 atlas atlas      4485 May 24 20:22 pilotlog.txt
2025-05-24 22:22:24 (1121773): Guest Log: -rw-------. 1 atlas atlas   3283448 May 24 20:22 log.44871837._009881.job.log.1
2025-05-24 22:22:24 (1121773): Guest Log: -rw-------. 1 atlas atlas       357 May 24 20:22 output.list
2025-05-24 22:22:24 (1121773): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 24 20:22 runtime_log
2025-05-24 22:22:24 (1121773): Guest Log: -rw-------. 1 atlas atlas   3788800 May 24 20:22 result.tar.gz
2025-05-24 22:22:24 (1121773): Guest Log: -rw-r--r--. 1 atlas atlas      8472 May 24 20:22 runtime_log.err
2025-05-24 22:22:24 (1121773): Guest Log: -rw-------. 1 atlas atlas       657 May 24 20:22 315LDmPNyc7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6EQKDmURGaFo.diag
2025-05-24 22:22:24 (1121773): Guest Log: Looking for outputfile HITS.44871837._009881.pool.root.1
2025-05-24 22:22:24 (1121773): Guest Log: HITS file was successfully produced
2025-05-24 22:22:24 (1121773): Guest Log: -rw-------. 1 atlas atlas 197070024 May 24 20:20 /home/atlas/RunAtlas/HITS.44871837._009881.pool.root.1
2025-05-24 22:22:25 (1121773): Guest Log: Successfully finished the ATLAS job!
2025-05-24 22:22:25 (1121773): Guest Log: Copying the results back to the shared directory!
2025-05-24 22:22:25 (1121773): Guest Log:  *** Contents of shared directory: ***
2025-05-24 22:22:25 (1121773): Guest Log: total 226428
2025-05-24 22:22:25 (1121773): Guest Log: -rw-r--r--. 1 root root 227520041 May 24 09:39 ATLAS.root_0
2025-05-24 22:22:25 (1121773): Guest Log: -rw-r--r--. 1 root root      9817 May 24 09:39 init_data.xml
2025-05-24 22:22:25 (1121773): Guest Log: -rw-r--r--. 1 root root    517087 May 24 09:39 input.tar.gz
2025-05-24 22:22:25 (1121773): Guest Log: -rw-r--r--. 1 root root   3788800 May 24 20:22 result.tar.gz
2025-05-24 22:22:25 (1121773): Guest Log: -rw-r--r--. 1 root root     15093 May 24 09:39 start_atlas.sh
2025-05-24 22:22:25 (1121773): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-24 22:22:25 (1121773): VM Completion File Detected.
2025-05-24 22:22:25 (1121773): Powering off VM.
2025-05-24 22:22:26 (1121773): Successfully stopped VM.
2025-05-24 22:22:26 (1121773): Deregistering VM. (boinc_41fe5bb7a2cf337b, slot#8)
2025-05-24 22:22:26 (1121773): Removing network bandwidth throttle group from VM.
2025-05-24 22:22:26 (1121773): Removing VM from VirtualBox.
22:22:31 (1121773): called boinc_finish(0)

</stderr_txt>
]]>

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