Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-24 19:09:09 (43624): Detected: vboxwrapper 26206
2025-05-24 19:09:09 (43624): Detected: BOINC client v8.0.2
2025-05-24 19:09:09 (43624): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-05-24 19:09:09 (43624): Successfully copied 'init_data.xml' to the shared directory.
2025-05-24 19:09:10 (43624): Create VM. (boinc_fd307e2c41d2edea, slot#4)
2025-05-24 19:09:10 (43624): Setting Memory Size for VM. (4800MB)
2025-05-24 19:09:11 (43624): Setting CPU Count for VM. (8)
2025-05-24 19:09:11 (43624): Setting Chipset Options for VM.
2025-05-24 19:09:11 (43624): Setting Graphics Controller Options for VM.
2025-05-24 19:09:12 (43624): Setting Boot Options for VM.
2025-05-24 19:09:12 (43624): Setting Network Configuration for NAT.
2025-05-24 19:09:12 (43624): Enabling VM Network Access.
2025-05-24 19:09:12 (43624): Disabling USB Support for VM.
2025-05-24 19:09:13 (43624): Disabling COM Port Support for VM.
2025-05-24 19:09:13 (43624): Disabling LPT Port Support for VM.
2025-05-24 19:09:13 (43624): Disabling Audio Support for VM.
2025-05-24 19:09:13 (43624): Disabling Clipboard Support for VM.
2025-05-24 19:09:14 (43624): Disabling Drag and Drop Support for VM.
2025-05-24 19:09:14 (43624): Adding storage controller(s) to VM.
2025-05-24 19:09:14 (43624): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-24 19:09:17 (43624): Adding VirtualBox Guest Additions to VM.
2025-05-24 19:09:17 (43624): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-24 19:09:18 (43624): forwarding host port 53228 to guest port 80
2025-05-24 19:09:18 (43624): Enabling remote desktop for VM.
2025-05-24 19:09:18 (43624): Required extension pack not installed, remote desktop not enabled.
2025-05-24 19:09:18 (43624): Enabling shared directory for VM.
2025-05-24 19:09:19 (43624): Starting VM using VBoxManage interface. (boinc_fd307e2c41d2edea, slot#4)
2025-05-24 19:09:26 (43624): Successfully started VM. (PID = '40496')
2025-05-24 19:09:26 (43624): Reporting VM Process ID to BOINC.
2025-05-24 19:09:26 (43624): Guest Log: BIOS: VirtualBox 7.0.6
2025-05-24 19:09:26 (43624): Guest Log: CPUID EDX: 0x178bfbff
2025-05-24 19:09:26 (43624): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-24 19:09:26 (43624): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-24 19:09:26 (43624): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-24 19:09:26 (43624): Detected: Web Application Enabled (http://localhost:53228)
2025-05-24 19:09:26 (43624): Preference change detected
2025-05-24 19:09:26 (43624): Setting CPU throttle for VM. (100%)
2025-05-24 19:09:26 (43624): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-24 19:09:28 (43624): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-24 19:09:28 (43624): Guest Log: BIOS: Booting from Hard Disk...
2025-05-24 19:09:31 (43624): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-24 19:09:31 (43624): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-24 19:09:31 (43624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-24 19:09:38 (43624): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-24 19:09:38 (43624): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-24 19:09:44 (43624): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-24 19:09:44 (43624): Guest Log: 00:00:00.000137 main     Log opened 2025-05-24T19:09:42.648733000Z
2025-05-24 19:09:44 (43624): Guest Log: 00:00:00.000259 main     OS Product: Linux
2025-05-24 19:09:44 (43624): Guest Log: 00:00:00.000305 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-24 19:09:44 (43624): Guest Log: 00:00:00.000345 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-24 19:09:44 (43624): Guest Log: 00:00:00.000386 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-24 19:09:44 (43624): Guest Log: 00:00:00.000386 main     Process ID: 1366
2025-05-24 19:09:44 (43624): Guest Log: 00:00:00.000387 main     Package type: LINUX_64BITS_GENERIC
2025-05-24 19:09:44 (43624): Guest Log: 00:00:00.002069 main     5.2.32 r132073 started. Verbose level = 0
2025-05-24 19:09:44 (43624): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-24 19:09:44 (43624): Guest Log: [INFO] Mounting shared directory
2025-05-24 19:09:44 (43624): Guest Log: [INFO] Checking for init_data.xml
2025-05-24 19:09:54 (43624): Guest Log: 00:00:10.020565 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 109 654 000ns (GuestNow=1 748 128 193 762 388 000 ns GuestLast=1 748 113 782 652 734 000 ns fSetTimeLastLoop=true )
2025-05-24 19:10:04 (43624): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-24 19:10:04 (43624): Guest Log: [INFO] Detected branch: prod
2025-05-24 19:10:06 (43624): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-24 19:10:06 (43624): Guest Log: Copying input files
2025-05-24 19:10:07 (43624): Guest Log: Copied input files into RunAtlas.
2025-05-24 19:10:07 (43624): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-24 19:10:07 (43624): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-24 19:10:07 (43624): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-24 19:10:07 (43624): Guest Log: Further information can be found at the LHC@home message board.
2025-05-24 19:10:24 (43624): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-24 19:10:25 (43624): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-24 19:10:25 (43624): Guest Log: 2.6.3.0 1669 0 30164 146382 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-05-24 19:10:26 (43624): Guest Log: copied the webapp to /var/www
2025-05-24 19:10:26 (43624): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-24 19:10:26 (43624): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-24 19:10:28 (43624): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-24 19:10:28 (43624): Guest Log:  *** Starting ATLAS job. (PandaID=6665287083 taskID=44871837) ***
2025-05-24 20:49:37 (43624): Status Report: Elapsed Time: '6000.000000'
2025-05-24 20:49:37 (43624): Status Report: CPU Time: '40707.484375'
2025-05-24 22:29:46 (43624): Status Report: Elapsed Time: '12000.000000'
2025-05-24 22:29:46 (43624): Status Report: CPU Time: '87178.015625'
2025-05-24 22:38:17 (43624): Guest Log:  *** Job finished ***
2025-05-24 22:38:17 (43624): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-24 22:38:17 (43624): Guest Log: 2025-05-25 02:38:05,041 | INFO     | [data] copytool_out thread has finished
2025-05-24 22:38:17 (43624): Guest Log: 2025-05-25 02:38:05,190 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-05-24 22:38:17 (43624): Guest Log: 2025-05-25 02:38:09,229 | INFO     | [data] queue_monitor thread has finished
2025-05-24 22:38:17 (43624): Guest Log: 2025-05-25 02:38:09,918 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140161616873280)>', '<ExcThread(monitor, started 140160855422720)>']
2025-05-24 22:38:17 (43624): Guest Log: 2025-05-25 02:38:09,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-24 22:38:17 (43624): Guest Log: 2025-05-25 02:38:09,959 | INFO     | [monitor] control thread has ended
2025-05-24 22:38:17 (43624): Guest Log: 2025-05-25 02:38:14,925 | INFO     | all workflow threads have been joined
2025-05-24 22:38:17 (43624): Guest Log: 2025-05-25 02:38:14,925 | INFO     | end of generic workflow (traces error code: 0)
2025-05-24 22:38:17 (43624): Guest Log: 2025-05-25 02:38:14,925 | INFO     | traces error code: 0
2025-05-24 22:38:17 (43624): Guest Log: 2025-05-25 02:38:14,925 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-24 22:38:17 (43624): Guest Log: 2025-05-25 02:38:15,011 [wrapper] ==== pilot stdout END ====
2025-05-24 22:38:17 (43624): Guest Log: 2025-05-25 02:38:15,017 [wrapper] ==== wrapper stdout RESUME ====
2025-05-24 22:38:17 (43624): Guest Log: 2025-05-25 02:38:15,023 [wrapper] pilotpid: 6021
2025-05-24 22:38:17 (43624): Guest Log: 2025-05-25 02:38:15,029 [wrapper] Pilot exit status: 0
2025-05-24 22:38:17 (43624): Guest Log: 2025-05-25 02:38:15,204 [wrapper] pandaids: 6665287083
2025-05-24 22:38:17 (43624): Guest Log: 2025-05-25 02:38:15,245 [wrapper] cleanup supervisor_pilot 11425 6022
2025-05-24 22:38:17 (43624): Guest Log: 2025-05-25 02:38:15,252 [wrapper] Test setup, not cleaning
2025-05-24 22:38:17 (43624): Guest Log: 2025-05-25 02:38:15,258 [wrapper] apfmon messages muted
2025-05-24 22:38:17 (43624): Guest Log: 2025-05-25 02:38:15,263 [wrapper] ==== wrapper stdout END ====
2025-05-24 22:38:17 (43624): Guest Log: 2025-05-25 02:38:15,268 [wrapper] ==== wrapper stderr END ====
2025-05-24 22:38:17 (43624): Guest Log:  *** Error codes and diagnostics ***
2025-05-24 22:38:17 (43624): Guest Log:     "exeErrorCode": 0,
2025-05-24 22:38:17 (43624): Guest Log:     "exeErrorDiag": "",
2025-05-24 22:38:17 (43624): Guest Log:     "pilotErrorCode": 0,
2025-05-24 22:38:17 (43624): Guest Log:     "pilotErrorDiag": "",
2025-05-24 22:38:17 (43624): Guest Log:  *** Listing of results directory ***
2025-05-24 22:38:17 (43624): Guest Log: total 196212
2025-05-24 22:38:17 (43624): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 24 08:12 pilot3.tar.gz
2025-05-24 22:38:17 (43624): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 24 08:20 queuedata.json
2025-05-24 22:38:17 (43624): Guest Log: -rwx------. 1 atlas atlas     37140 May 24 08:20 runpilot2-wrapper.sh
2025-05-24 22:38:17 (43624): Guest Log: -rwxr-xr-x. 1 atlas atlas     11734 May 24 23:10 init_data.xml
2025-05-24 22:38:17 (43624): Guest Log: -rwxr-xr-x. 1 atlas atlas    508881 May 24 23:10 input.tar.gz
2025-05-24 22:38:17 (43624): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 24 23:10 start_atlas.sh
2025-05-24 22:38:17 (43624): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 24 23:10 EVNT.44871834._000481.pool.root.1 -> /data/./ATLAS.root_0
2025-05-24 22:38:17 (43624): Guest Log: -rw-r--r--. 1 atlas atlas      2558 May 24 23:10 pandaJob.out
2025-05-24 22:38:17 (43624): Guest Log: -rw-------. 1 atlas atlas    990803 May 24 23:12 agis_schedconf.cvmfs.json
2025-05-24 22:38:17 (43624): Guest Log: drwx------. 4 atlas atlas      4096 May 24 23:12 pilot3
2025-05-24 22:38:17 (43624): Guest Log: -rw-------. 1 atlas atlas 194388109 May 25 02:37 HITS.44871837._012024.pool.root.1
2025-05-24 22:38:17 (43624): Guest Log: -rw-------. 1 atlas atlas        95 May 25 02:37 pilot_heartbeat.json
2025-05-24 22:38:17 (43624): Guest Log: -rw-------. 1 atlas atlas      1030 May 25 02:37 memory_monitor_summary.json
2025-05-24 22:38:17 (43624): Guest Log: -rw-------. 1 atlas atlas   1596740 May 25 02:37 agis_ddmendpoints.agis.ALL.json
2025-05-24 22:38:17 (43624): Guest Log: -rw-------. 1 atlas atlas    380888 May 25 02:37 log.44871837._012024.job.log.tgz.1
2025-05-24 22:38:17 (43624): Guest Log: -rw-------. 1 atlas atlas      7732 May 25 02:38 heartbeat.json
2025-05-24 22:38:17 (43624): Guest Log: -rw-------. 1 atlas atlas      4536 May 25 02:38 pilotlog.txt
2025-05-24 22:38:17 (43624): Guest Log: -rw-------. 1 atlas atlas   1003657 May 25 02:38 log.44871837._012024.job.log.1
2025-05-24 22:38:17 (43624): Guest Log: -rw-------. 1 atlas atlas       357 May 25 02:38 output.list
2025-05-24 22:38:17 (43624): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 25 02:38 runtime_log
2025-05-24 22:38:17 (43624): Guest Log: -rw-------. 1 atlas atlas   1402880 May 25 02:38 result.tar.gz
2025-05-24 22:38:17 (43624): Guest Log: -rw-------. 1 atlas atlas       664 May 25 02:38 gWfKDmnIzc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaEMKDmntrtVm.diag
2025-05-24 22:38:17 (43624): Guest Log: -rw-r--r--. 1 atlas atlas      8614 May 25 02:38 runtime_log.err
2025-05-24 22:38:17 (43624): Guest Log: Looking for outputfile HITS.44871837._012024.pool.root.1
2025-05-24 22:38:17 (43624): Guest Log: HITS file was successfully produced
2025-05-24 22:38:17 (43624): Guest Log: -rw-------. 1 atlas atlas 194388109 May 25 02:37 /home/atlas/RunAtlas/HITS.44871837._012024.pool.root.1
2025-05-24 22:38:18 (43624): Guest Log: Successfully finished the ATLAS job!
2025-05-24 22:38:18 (43624): Guest Log: Copying the results back to the shared directory!
2025-05-24 22:38:18 (43624): Guest Log:  *** Contents of shared directory: ***
2025-05-24 22:38:19 (43624): Guest Log: total 409656
2025-05-24 22:38:19 (43624): Guest Log: -rwxrwxrwx. 1 root root 223149926 May 24 23:09 ATLAS.root_0
2025-05-24 22:38:19 (43624): Guest Log: -rwxrwxrwx. 1 root root 194388109 May 25 02:38 HITS.pool.root.1
2025-05-24 22:38:19 (43624): Guest Log: -rwxrwxrwx. 1 root root     11734 May 24 23:09 init_data.xml
2025-05-24 22:38:19 (43624): Guest Log: -rwxrwxrwx. 1 root root    508881 May 24 09:12 input.tar.gz
2025-05-24 22:38:19 (43624): Guest Log: -rwxrwxrwx. 1 root root   1402880 May 25 02:38 result.tar.gz
2025-05-24 22:38:19 (43624): Guest Log: -rwxrwxrwx. 1 root root     15093 May 24 09:12 start_atlas.sh
2025-05-24 22:38:19 (43624): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-24 22:38:19 (43624): VM Completion File Detected.
2025-05-24 22:38:19 (43624): Powering off VM.
2025-05-24 22:38:19 (43624): Successfully stopped VM.
2025-05-24 22:38:19 (43624): Deregistering VM. (boinc_fd307e2c41d2edea, slot#4)
2025-05-24 22:38:20 (43624): Removing network bandwidth throttle group from VM.
2025-05-24 22:38:20 (43624): Removing VM from VirtualBox.
22:38:25 (43624): called boinc_finish(0)

</stderr_txt>
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