Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:57:05 (25935): wrapper (7.7.26015): starting
04:57:05 (25935): wrapper: running run_atlas (--nthreads 12)
[2025-05-24 04:57:05] Arguments: --nthreads 12
[2025-05-24 04:57:05] Threads: 12
[2025-05-24 04:57:05] Checking for CVMFS
[2025-05-24 04:57:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 04:57:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 04:57:05] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 04:57:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 04:57:06] 2.11.2.0 2984 19584 80108 146360 2 57 16165078 20275201 1 130560 0 5421594 99.966 3484844 21326 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 04:57:06] CVMFS is ok
[2025-05-24 04:57:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 04:57:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 04:57:06] Further information can be found at the LHC@home message board.
[2025-05-24 04:57:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 04:57:06] Checking for apptainer binary...
[2025-05-24 04:57:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 04:57:06] Running /usr/bin/apptainer --version
[2025-05-24 04:57:06] apptainer version 1.3.2-1.el7
[2025-05-24 04:57:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 04:57:07] c-205-26.aglt2.org
[2025-05-24 04:57:07] apptainer works
[2025-05-24 04:57:07] Set ATHENA_PROC_NUMBER=12
[2025-05-24 04:57:07] Set ATHENA_CORE_NUMBER=12
[2025-05-24 04:57:07] Starting ATLAS job with PandaID=6665270496
[2025-05-24 04:57:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 06:30:13]  *** The last 200 lines of the pilot log: ***
[2025-05-24 06:30:13]  lfn=log.44871837._006567.job.log.tgz.1
[2025-05-24 06:30:13]  mtime=0
[2025-05-24 06:30:13]  protocol_id=None
[2025-05-24 06:30:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-24 06:30:13]  replicas=None
[2025-05-24 06:30:13]  scope=mc23_13p6TeV
[2025-05-24 06:30:13]  status=None
[2025-05-24 06:30:13]  status_code=0
[2025-05-24 06:30:13]  storage_token=
[2025-05-24 06:30:13]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6665270496/log.44871837._006567.job.log.tgz.1
[2025-05-24 06:30:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/44/82/log.44871837._006567.job.log.tgz.1
[2025-05-24 06:30:13]  workdir=None
[2025-05-24 06:30:13] ]
[2025-05-24 06:30:13] 2025-05-24 10:29:47,347 | INFO     | transferring file log.44871837._006567.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6665270496/log.44871837._006567.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-24 06:30:13] 2025-05-24 10:29:47,348 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6665270496/log.44871837._006567.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._006567.job
[2025-05-24 06:30:13] 2025-05-24 10:29:47,375 | INFO     | adding to output.list: log.44871837._006567.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/44/82/log.44871837._006567.job.log.tg
[2025-05-24 06:30:13] 2025-05-24 10:29:47,376 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-24 06:30:13] 2025-05-24 10:29:47,376 | INFO     | summary of transferred files:
[2025-05-24 06:30:13] 2025-05-24 10:29:47,376 | INFO     |  -- lfn=log.44871837._006567.job.log.tgz.1, status_code=0, status=transferred
[2025-05-24 06:30:13] 2025-05-24 10:29:47,377 | INFO     | stage-out finished correctly
[2025-05-24 06:30:13] 2025-05-24 10:29:49,653 | INFO     | PID=29526 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-24 06:30:13] 2025-05-24 10:29:49,953 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-24 06:30:13] 2025-05-24 10:29:50,165 | INFO     | job 6665270496 has state=finished
[2025-05-24 06:30:13] 2025-05-24 10:29:50,165 | INFO     | preparing for final server update for job 6665270496 in state='finished'
[2025-05-24 06:30:13] 2025-05-24 10:29:50,166 | INFO     | this job has now completed (state=finished)
[2025-05-24 06:30:13] 2025-05-24 10:29:50,166 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-24 06:30:13] 2025-05-24 10:29:50,166 | INFO     | log transfer has been attempted: DONE
[2025-05-24 06:30:13] 2025-05-24 10:29:50,166 | INFO     | job 6665270496 has finished - writing final server update
[2025-05-24 06:30:13] 2025-05-24 10:29:50,166 | INFO     | total number of processed events: 400 (read)
[2025-05-24 06:30:13] 2025-05-24 10:29:50,168 | INFO     | executing command: lscpu
[2025-05-24 06:30:13] 2025-05-24 10:29:50,197 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-24 06:30:13] 2025-05-24 10:29:51,915 | WARNING  | process 3661 can no longer be monitored (due to stat problems) - aborting
[2025-05-24 06:30:13] 2025-05-24 10:29:51,916 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6665270496/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 06:30:13] 2025-05-24 10:29:52,005 | INFO     | number of running child processes to parent process 3661: 1
[2025-05-24 06:30:13] 2025-05-24 10:29:52,006 | INFO     | maximum number of monitored processes: 6
[2025-05-24 06:30:13] 2025-05-24 10:29:54,509 | INFO     | monitor loop #413: job 0:6665270496 is in state 'finished'
[2025-05-24 06:30:13] 2025-05-24 10:29:54,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 06:30:13] 2025-05-24 10:29:54,809 | INFO     | CPU arch script returned: x86-64-v2
[2025-05-24 06:30:13] 2025-05-24 10:29:54,809 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6665270496/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 06:30:13] 2025-05-24 10:29:54,810 | INFO     | extracted standard info from prmon json
[2025-05-24 06:30:13] 2025-05-24 10:29:54,810 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 06:30:13] 2025-05-24 10:29:54,810 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 06:30:13] 2025-05-24 10:29:54,811 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 06:30:13] 2025-05-24 10:29:54,811 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 06:30:13] 2025-05-24 10:29:54,813 | INFO     | fitting pss+swap vs Time
[2025-05-24 06:30:13] 2025-05-24 10:29:54,814 | INFO     | sum of square deviations: 183761585.0
[2025-05-24 06:30:13] 2025-05-24 10:29:54,814 | INFO     | sum of deviations: -3518947931.0000005
[2025-05-24 06:30:13] 2025-05-24 10:29:54,815 | INFO     | mean x: 1748079907.5
[2025-05-24 06:30:13] 2025-05-24 10:29:54,815 | INFO     | mean y: 2724333.976190476
[2025-05-24 06:30:13] 2025-05-24 10:29:54,815 | INFO     | -- intersect: 33477632453.210125
[2025-05-24 06:30:13] 2025-05-24 10:29:54,815 | INFO     | intersect: 33477632453.210125
[2025-05-24 06:30:13] 2025-05-24 10:29:54,816 | INFO     | chi2: 0.12339826379729853
[2025-05-24 06:30:13] 2025-05-24 10:29:54,816 | INFO     | -- intersect: 33477632453.210125
[2025-05-24 06:30:13] 2025-05-24 10:29:54,816 | INFO     | current memory leak: -19.15 B/s (using 84 data points, chi2=0.12)
[2025-05-24 06:30:13] 2025-05-24 10:29:54,816 | INFO     | ..............................
[2025-05-24 06:30:13] 2025-05-24 10:29:54,816 | INFO     | . Timing measurements:
[2025-05-24 06:30:13] 2025-05-24 10:29:54,816 | INFO     | . get job = 0 s
[2025-05-24 06:30:13] 2025-05-24 10:29:54,816 | INFO     | . initial setup = 2 s
[2025-05-24 06:30:13] 2025-05-24 10:29:54,817 | INFO     | . payload setup = 9 s
[2025-05-24 06:30:13] 2025-05-24 10:29:54,817 | INFO     | . stage-in = 0 s
[2025-05-24 06:30:13] 2025-05-24 10:29:54,817 | INFO     | . payload execution = 5516 s
[2025-05-24 06:30:13] 2025-05-24 10:29:54,817 | INFO     | . stage-out = 0 s
[2025-05-24 06:30:13] 2025-05-24 10:29:54,817 | INFO     | . log creation = 0 s
[2025-05-24 06:30:13] 2025-05-24 10:29:54,817 | INFO     | ..............................
[2025-05-24 06:30:13] 2025-05-24 10:29:54,900 | INFO     | 
[2025-05-24 06:30:13] 2025-05-24 10:29:54,901 | INFO     | job summary report
[2025-05-24 06:30:13] 2025-05-24 10:29:54,901 | INFO     | --------------------------------------------------
[2025-05-24 06:30:13] 2025-05-24 10:29:54,901 | INFO     | PanDA job id: 6665270496
[2025-05-24 06:30:13] 2025-05-24 10:29:54,901 | INFO     | task id: 44871837
[2025-05-24 06:30:13] 2025-05-24 10:29:54,901 | INFO     | errors: (none)
[2025-05-24 06:30:13] 2025-05-24 10:29:54,901 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 06:30:13] 2025-05-24 10:29:54,901 | INFO     | pilot state: finished 
[2025-05-24 06:30:13] 2025-05-24 10:29:54,902 | INFO     | transexitcode: 0
[2025-05-24 06:30:13] 2025-05-24 10:29:54,902 | INFO     | exeerrorcode: 0
[2025-05-24 06:30:13] 2025-05-24 10:29:54,902 | INFO     | exeerrordiag: 
[2025-05-24 06:30:13] 2025-05-24 10:29:54,902 | INFO     | exitcode: 0
[2025-05-24 06:30:13] 2025-05-24 10:29:54,902 | INFO     | exitmsg: OK
[2025-05-24 06:30:13] 2025-05-24 10:29:54,902 | INFO     | cpuconsumptiontime: 59240 s
[2025-05-24 06:30:13] 2025-05-24 10:29:54,903 | INFO     | nevents: 400
[2025-05-24 06:30:13] 2025-05-24 10:29:54,903 | INFO     | neventsw: 0
[2025-05-24 06:30:13] 2025-05-24 10:29:54,903 | INFO     | pid: 3661
[2025-05-24 06:30:13] 2025-05-24 10:29:54,903 | INFO     | pgrp: 3661
[2025-05-24 06:30:13] 2025-05-24 10:29:54,903 | INFO     | corecount: 12
[2025-05-24 06:30:13] 2025-05-24 10:29:54,903 | INFO     | event service: False
[2025-05-24 06:30:13] 2025-05-24 10:29:54,904 | INFO     | sizes: {0: 2393736, 1: 2393736, 5: 2393970, 11: 2394026, 5529: 2420438, 5531: 2429379, 5533: 2429563, 5538: 2429733}
[2025-05-24 06:30:13] 2025-05-24 10:29:54,904 | INFO     | --------------------------------------------------
[2025-05-24 06:30:13] 2025-05-24 10:29:54,904 | INFO     | 
[2025-05-24 06:30:13] 2025-05-24 10:29:54,904 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-24 06:30:13] 2025-05-24 10:29:54,927 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 06:30:13] 2025-05-24 10:29:54,927 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 06:30:13] 2025-05-24 10:29:54,928 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 06:30:13] 2025-05-24 10:29:54,928 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 06:30:13] 2025-05-24 10:29:54,928 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 06:30:13] 2025-05-24 10:29:54,928 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 06:30:13] 2025-05-24 10:29:54,928 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 06:30:13] 2025-05-24 10:29:54,928 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 06:30:13] 2025-05-24 10:29:54,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 06:30:13] 2025-05-24 10:29:54,929 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 06:30:13] 2025-05-24 10:29:54,929 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 06:30:13] 2025-05-24 10:29:54,929 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 06:30:13] 2025-05-24 10:29:54,929 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 06:30:13] 2025-05-24 10:29:54,929 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 06:30:13] 2025-05-24 10:29:54,930 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 06:30:13] 2025-05-24 10:29:54,930 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 06:30:13] 2025-05-24 10:29:54,930 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 06:30:13] 2025-05-24 10:29:54,930 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 06:30:13] 2025-05-24 10:29:54,930 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 06:30:13] 2025-05-24 10:29:54,930 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 06:30:13] 2025-05-24 10:29:54,931 | INFO     | job 6665270496 has completed (purged errors)
[2025-05-24 06:30:13] 2025-05-24 10:29:54,931 | INFO     | overall cleanup function is called
[2025-05-24 06:30:13] 2025-05-24 10:29:55,939 | INFO     | --- collectZombieJob: --- 10, [3661]
[2025-05-24 06:30:13] 2025-05-24 10:29:55,939 | INFO     | zombie collector waiting for pid 3661
[2025-05-24 06:30:13] 2025-05-24 10:29:55,939 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 06:30:13] 2025-05-24 10:29:55,940 | INFO     | collected zombie processes
[2025-05-24 06:30:13] 2025-05-24 10:29:55,940 | INFO     | will attempt to kill all subprocesses of pid=3661
[2025-05-24 06:30:13] 2025-05-24 10:29:56,030 | INFO     | process IDs to be killed: [3661] (in reverse order)
[2025-05-24 06:30:13] 2025-05-24 10:29:56,085 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 06:30:13] 2025-05-24 10:29:56,085 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 06:30:13] 2025-05-24 10:29:56,089 | INFO     | did not find any defunct processes belonging to 3661
[2025-05-24 06:30:13] 2025-05-24 10:29:56,092 | INFO     | did not find any defunct processes belonging to 3661
[2025-05-24 06:30:13] 2025-05-24 10:29:56,093 | INFO     | ready for new job
[2025-05-24 06:30:13] 2025-05-24 10:29:56,093 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 06:30:13] 2025-05-24 10:29:56,094 | INFO     | **************************************
[2025-05-24 06:30:13] 2025-05-24 10:29:56,094 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 06:30:13] 2025-05-24 10:29:56,095 | INFO     | **************************************
[2025-05-24 06:30:13] 2025-05-24 10:29:56,095 | INFO     | 
[2025-05-24 06:30:13] 2025-05-24 10:29:56,096 | INFO     | architecture information:
[2025-05-24 06:30:13] 2025-05-24 10:29:56,096 | INFO     | executing command: cat /etc/os-release
[2025-05-24 06:30:13] 2025-05-24 10:29:56,110 | INFO     | cat /etc/os-release:
[2025-05-24 06:30:13] NAME="CentOS Linux"
[2025-05-24 06:30:13] VERSION="7 (Core)"
[2025-05-24 06:30:13] ID="centos"
[2025-05-24 06:30:13] ID_LIKE="rhel fedora"
[2025-05-24 06:30:13] VERSION_ID="7"
[2025-05-24 06:30:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 06:30:13] ANSI_COLOR="0;31"
[2025-05-24 06:30:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 06:30:13] HOME_URL="https://www.centos.org/"
[2025-05-24 06:30:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 06:30:13] 
[2025-05-24 06:30:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 06:30:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 06:30:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 06:30:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 06:30:13] 
[2025-05-24 06:30:13] 2025-05-24 10:29:56,110 | INFO     | **************************************
[2025-05-24 06:30:13] 2025-05-24 10:29:56,613 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-24 06:30:13] 2025-05-24 10:29:56,630 | INFO     | sufficient remaining disk space (29388439552 B)
[2025-05-24 06:30:13] 2025-05-24 10:29:56,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 06:30:13] 2025-05-24 10:29:56,630 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 06:30:13] 2025-05-24 10:29:56,630 | INFO     | update_server=False
[2025-05-24 06:30:13] 2025-05-24 10:29:56,630 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 06:30:13] 2025-05-24 10:29:56,631 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 06:30:13] 2025-05-24 10:29:56,631 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 06:30:13] 2025-05-24 10:29:56,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 06:30:13] 2025-05-24 10:29:56,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 06:30:13] 2025-05-24 10:29:56,632 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 06:30:13] 2025-05-24 10:29:56,632 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 06:30:13] 2025-05-24 10:29:56,889 | INFO     | all data control threads have been joined
[2025-05-24 06:30:13] 2025-05-24 10:29:57,012 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-24 06:30:13] 2025-05-24 10:29:57,012 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-24 06:30:13] 2025-05-24 10:29:57,022 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 06:30:13] 2025-05-24 10:29:57,022 | INFO     | will abort loop
[2025-05-24 06:30:13] 2025-05-24 10:29:57,047 | INFO     | all job control threads have been joined
[2025-05-24 06:30:13] 2025-05-24 10:29:57,636 | INFO     | [job] retrieve thread has finished
[2025-05-24 06:30:13] 2025-05-24 10:29:57,638 | INFO     | [job] queue monitor thread has finished
[2025-05-24 06:30:13] 2025-05-24 10:29:57,821 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 06:30:13] 2025-05-24 10:29:57,872 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 06:30:13] 2025-05-24 10:29:57,885 | INFO     | [data] copytool_in thread has finished
[2025-05-24 06:30:13] 2025-05-24 10:29:57,895 | INFO     | [data] control thread has finished
[2025-05-24 06:30:13] 2025-05-24 10:29:57,982 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 06:30:13] 2025-05-24 10:29:58,027 | INFO     | [job] job monitor thread has finished
[2025-05-24 06:30:13] 2025-05-24 10:29:58,043 | INFO     | all payload control threads have been joined
[2025-05-24 06:30:13] 2025-05-24 10:29:58,053 | INFO     | [job] control thread has finished
[2025-05-24 06:30:13] 2025-05-24 10:29:58,621 | INFO     | [payload] validate_post thread has finished
[2025-05-24 06:30:13] 2025-05-24 10:29:58,624 | INFO     | [job] validate thread has finished
[2025-05-24 06:30:13] 2025-05-24 10:29:58,630 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 06:30:13] 2025-05-24 10:29:59,049 | INFO     | [payload] control thread has finished
[2025-05-24 06:30:13] 2025-05-24 10:29:59,107 | INFO     | [payload] failed_post thread has finished
[2025-05-24 06:30:13] 2025-05-24 10:29:59,988 | INFO     | [data] copytool_out thread has finished
[2025-05-24 06:30:13] 2025-05-24 10:30:00,638 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 06:30:13] 2025-05-24 10:30:06,783 | INFO     | job.realtimelogging is not enabled
[2025-05-24 06:30:13] 2025-05-24 10:30:07,788 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 06:30:13] 2025-05-24 10:30:08,382 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140119747667776)>', '<ExcThread(monitor, started 140118761379584)>']
[2025-05-24 06:30:13] 2025-05-24 10:30:08,688 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 06:30:13] 2025-05-24 10:30:08,688 | INFO     | [monitor] control thread has ended
[2025-05-24 06:30:13] 2025-05-24 10:30:13,392 | INFO     | all workflow threads have been joined
[2025-05-24 06:30:13] 2025-05-24 10:30:13,392 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 06:30:13] 2025-05-24 10:30:13,392 | INFO     | traces error code: 0
[2025-05-24 06:30:13] 2025-05-24 10:30:13,393 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 06:30:13] 2025-05-24 10:30:13,487 [wrapper] ==== pilot stdout END ====
[2025-05-24 06:30:13] 2025-05-24 10:30:13,491 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 06:30:13] 2025-05-24 10:30:13,494 [wrapper] pilotpid: 29526
[2025-05-24 06:30:13] 2025-05-24 10:30:13,498 [wrapper] Pilot exit status: 0
[2025-05-24 06:30:13] 2025-05-24 10:30:13,513 [wrapper] pandaids: 6665270496
[2025-05-24 06:30:13] 2025-05-24 10:30:13,559 [wrapper] cleanup supervisor_pilot 20704 29527
[2025-05-24 06:30:13] 2025-05-24 10:30:13,563 [wrapper] Test setup, not cleaning
[2025-05-24 06:30:13] 2025-05-24 10:30:13,567 [wrapper] apfmon messages muted
[2025-05-24 06:30:13] 2025-05-24 10:30:13,571 [wrapper] ==== wrapper stdout END ====
[2025-05-24 06:30:13] 2025-05-24 10:30:13,575 [wrapper] ==== wrapper stderr END ====
[2025-05-24 06:30:13]  *** Error codes and diagnostics ***
[2025-05-24 06:30:13]     "exeErrorCode": 0,
[2025-05-24 06:30:13]     "exeErrorDiag": "",
[2025-05-24 06:30:13]     "pilotErrorCode": 0,
[2025-05-24 06:30:13]     "pilotErrorDiag": "",
[2025-05-24 06:30:13]  *** Listing of results directory ***
[2025-05-24 06:30:13] total 417476
[2025-05-24 06:30:13] -rw-r--r-- 1 boincer umatlas    495897 May 24 01:59 pilot3.tar.gz
[2025-05-24 06:30:13] -rwx------ 1 boincer umatlas     37140 May 24 02:04 runpilot2-wrapper.sh
[2025-05-24 06:30:13] -rw-r--r-- 1 boincer umatlas      5111 May 24 02:04 queuedata.json
[2025-05-24 06:30:13] -rw-r--r-- 1 boincer umatlas       100 May 24 04:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 06:30:13] -rwxr-xr-x 1 boincer umatlas      7986 May 24 04:57 run_atlas
[2025-05-24 06:30:13] -rw-r--r-- 1 boincer umatlas       105 May 24 04:57 job.xml
[2025-05-24 06:30:13] -rw-r--r-- 2 boincer umatlas 222744573 May 24 04:57 EVNT.44871834._000263.pool.root.1
[2025-05-24 06:30:13] -rw-r--r-- 2 boincer umatlas    508875 May 24 04:57 input.tar.gz
[2025-05-24 06:30:13] -rw-r--r-- 2 boincer umatlas     15093 May 24 04:57 start_atlas.sh
[2025-05-24 06:30:13] drwxrwx--x 2 boincer umatlas      4096 May 24 04:57 shared
[2025-05-24 06:30:13] -rw-r--r-- 1 boincer umatlas         0 May 24 04:57 boinc_lockfile
[2025-05-24 06:30:13] -rw-r--r-- 1 boincer umatlas      2557 May 24 04:57 pandaJob.out
[2025-05-24 06:30:13] -rw------- 1 boincer umatlas    988612 May 24 04:57 agis_schedconf.cvmfs.json
[2025-05-24 06:30:13] -rw------- 1 boincer umatlas   1596740 May 24 04:57 agis_ddmendpoints.agis.ALL.json
[2025-05-24 06:30:13] drwx------ 4 boincer umatlas      4096 May 24 04:57 pilot3
[2025-05-24 06:30:13] -rw-r--r-- 1 boincer umatlas      5868 May 24 06:21 init_data.xml
[2025-05-24 06:30:13] -rw------- 1 boincer umatlas 199128457 May 24 06:29 HITS.44871837._006567.pool.root.1
[2025-05-24 06:30:13] -rw-r--r-- 1 boincer umatlas       529 May 24 06:29 boinc_task_state.xml
[2025-05-24 06:30:13] -rw------- 1 boincer umatlas        95 May 24 06:29 pilot_heartbeat.json
[2025-05-24 06:30:13] -rw------- 1 boincer umatlas      1064 May 24 06:29 memory_monitor_summary.json
[2025-05-24 06:30:13] -rw------- 1 boincer umatlas    376171 May 24 06:29 log.44871837._006567.job.log.tgz.1
[2025-05-24 06:30:13] -rw------- 1 boincer umatlas      7752 May 24 06:29 heartbeat.json
[2025-05-24 06:30:13] -rw-r--r-- 1 boincer umatlas        27 May 24 06:30 wrapper_checkpoint.txt
[2025-05-24 06:30:13] -rw-r--r-- 1 boincer umatlas      8192 May 24 06:30 boinc_mmap_file
[2025-05-24 06:30:13] -rw------- 1 boincer umatlas      4734 May 24 06:30 pilotlog.txt
[2025-05-24 06:30:13] -rw------- 1 boincer umatlas    520528 May 24 06:30 log.44871837._006567.job.log.1
[2025-05-24 06:30:13] -rw------- 1 boincer umatlas       357 May 24 06:30 output.list
[2025-05-24 06:30:13] -rw-r--r-- 1 boincer umatlas       620 May 24 06:30 runtime_log
[2025-05-24 06:30:13] -rw------- 1 boincer umatlas    911360 May 24 06:30 result.tar.gz
[2025-05-24 06:30:13] -rw------- 1 boincer umatlas       659 May 24 06:30 yMiKDmkAxc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmRdLKDmzCAYkn.diag
[2025-05-24 06:30:13] -rw-r--r-- 1 boincer umatlas      8661 May 24 06:30 runtime_log.err
[2025-05-24 06:30:13] -rw-r--r-- 1 boincer umatlas     21640 May 24 06:30 stderr.txt
[2025-05-24 06:30:13] HITS file was successfully produced:
[2025-05-24 06:30:13] -rw------- 1 boincer umatlas 199128457 May 24 06:29 shared/HITS.pool.root.1
[2025-05-24 06:30:13]  *** Contents of shared directory: ***
[2025-05-24 06:30:13] total 413404
[2025-05-24 06:30:13] -rw-r--r-- 2 boincer umatlas 222744573 May 24 04:57 ATLAS.root_0
[2025-05-24 06:30:13] -rw-r--r-- 2 boincer umatlas    508875 May 24 04:57 input.tar.gz
[2025-05-24 06:30:13] -rw-r--r-- 2 boincer umatlas     15093 May 24 04:57 start_atlas.sh
[2025-05-24 06:30:13] -rw------- 1 boincer umatlas 199128457 May 24 06:29 HITS.pool.root.1
[2025-05-24 06:30:13] -rw------- 1 boincer umatlas    911360 May 24 06:30 result.tar.gz
06:30:15 (25935): run_atlas exited; CPU time 59215.859008
06:30:15 (25935): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN