Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:32:37 (10906): wrapper (7.7.26015): starting
04:32:37 (10906): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 04:32:37] Arguments: --nthreads 8
[2025-05-24 04:32:37] Threads: 8
[2025-05-24 04:32:37] Checking for CVMFS
[2025-05-24 04:32:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 04:32:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 04:32:37] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 04:32:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 04:32:38] 2.11.2.0 1598 12927 84708 146360 0 187 14531149 20275201 917 130560 0 7313249 99.986 2041760 15590 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 04:32:38] CVMFS is ok
[2025-05-24 04:32:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 04:32:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 04:32:38] Further information can be found at the LHC@home message board.
[2025-05-24 04:32:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 04:32:38] Checking for apptainer binary...
[2025-05-24 04:32:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 04:32:38] Running /usr/bin/apptainer --version
[2025-05-24 04:32:38] apptainer version 1.3.2-1.el7
[2025-05-24 04:32:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 04:32:38] c-205-36.aglt2.org
[2025-05-24 04:32:38] apptainer works
[2025-05-24 04:32:38] Set ATHENA_PROC_NUMBER=8
[2025-05-24 04:32:38] Set ATHENA_CORE_NUMBER=8
[2025-05-24 04:32:38] Starting ATLAS job with PandaID=6665150323
[2025-05-24 04:32:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 05:59:27]  *** The last 200 lines of the pilot log: ***
[2025-05-24 05:59:27]  protocol_id=None
[2025-05-24 05:59:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-24 05:59:27]  replicas=None
[2025-05-24 05:59:27]  scope=mc23_13p6TeV
[2025-05-24 05:59:27]  status=None
[2025-05-24 05:59:27]  status_code=0
[2025-05-24 05:59:27]  storage_token=
[2025-05-24 05:59:27]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6665150323/log.44871837._002613.job.log.tgz.1
[2025-05-24 05:59:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/cc/log.44871837._002613.job.log.tgz.1
[2025-05-24 05:59:27]  workdir=None
[2025-05-24 05:59:27] ]
[2025-05-24 05:59:27] 2025-05-24 09:59:02,382 | INFO     | transferring file log.44871837._002613.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6665150323/log.44871837._002613.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-24 05:59:27] 2025-05-24 09:59:02,382 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6665150323/log.44871837._002613.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._002613.job
[2025-05-24 05:59:27] 2025-05-24 09:59:02,402 | INFO     | adding to output.list: log.44871837._002613.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/cc/log.44871837._002613.job.log.tg
[2025-05-24 05:59:27] 2025-05-24 09:59:02,403 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-24 05:59:27] 2025-05-24 09:59:02,403 | INFO     | summary of transferred files:
[2025-05-24 05:59:27] 2025-05-24 09:59:02,403 | INFO     |  -- lfn=log.44871837._002613.job.log.tgz.1, status_code=0, status=transferred
[2025-05-24 05:59:27] 2025-05-24 09:59:02,403 | INFO     | stage-out finished correctly
[2025-05-24 05:59:27] 2025-05-24 09:59:02,458 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-24 05:59:27] 2025-05-24 09:59:02,755 | WARNING  | process 20970 can no longer be monitored (due to stat problems) - aborting
[2025-05-24 05:59:27] 2025-05-24 09:59:02,756 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6665150323/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 05:59:27] 2025-05-24 09:59:02,837 | INFO     | number of running child processes to parent process 20970: 1
[2025-05-24 05:59:27] 2025-05-24 09:59:02,837 | INFO     | maximum number of monitored processes: 6
[2025-05-24 05:59:27] 2025-05-24 09:59:04,367 | INFO     | job 6665150323 has state=finished
[2025-05-24 05:59:27] 2025-05-24 09:59:04,368 | INFO     | preparing for final server update for job 6665150323 in state='finished'
[2025-05-24 05:59:27] 2025-05-24 09:59:04,368 | INFO     | this job has now completed (state=finished)
[2025-05-24 05:59:27] 2025-05-24 09:59:04,369 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-24 05:59:27] 2025-05-24 09:59:04,369 | INFO     | log transfer has been attempted: DONE
[2025-05-24 05:59:27] 2025-05-24 09:59:04,369 | INFO     | job 6665150323 has finished - writing final server update
[2025-05-24 05:59:27] 2025-05-24 09:59:04,369 | INFO     | total number of processed events: 400 (read)
[2025-05-24 05:59:27] 2025-05-24 09:59:04,371 | INFO     | executing command: lscpu
[2025-05-24 05:59:27] 2025-05-24 09:59:04,406 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-24 05:59:27] 2025-05-24 09:59:05,340 | INFO     | monitor loop #384: job 0:6665150323 is in state 'finished'
[2025-05-24 05:59:27] 2025-05-24 09:59:05,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 05:59:27] 2025-05-24 09:59:07,842 | INFO     | monitor loop #385: job 0:6665150323 is in state 'finished'
[2025-05-24 05:59:27] 2025-05-24 09:59:07,843 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 05:59:27] 2025-05-24 09:59:10,345 | INFO     | monitor loop #386: job 0:6665150323 is in state 'finished'
[2025-05-24 05:59:27] 2025-05-24 09:59:10,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 05:59:27] 2025-05-24 09:59:12,849 | INFO     | monitor loop #387: job 0:6665150323 is in state 'finished'
[2025-05-24 05:59:27] 2025-05-24 09:59:12,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 05:59:27] 2025-05-24 09:59:13,827 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-24 05:59:27] 2025-05-24 09:59:13,828 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6665150323/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 05:59:27] 2025-05-24 09:59:13,828 | INFO     | extracted standard info from prmon json
[2025-05-24 05:59:27] 2025-05-24 09:59:13,829 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 05:59:27] 2025-05-24 09:59:13,829 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 05:59:27] 2025-05-24 09:59:13,829 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 05:59:27] 2025-05-24 09:59:13,829 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 05:59:27] 2025-05-24 09:59:13,830 | INFO     | fitting pss+swap vs Time
[2025-05-24 05:59:27] 2025-05-24 09:59:13,831 | INFO     | sum of square deviations: 147126479.5
[2025-05-24 05:59:27] 2025-05-24 09:59:13,831 | INFO     | sum of deviations: -5586802852.0
[2025-05-24 05:59:27] 2025-05-24 09:59:13,831 | INFO     | mean x: 1748078249.5
[2025-05-24 05:59:27] 2025-05-24 09:59:13,831 | INFO     | mean y: 2594221.846153846
[2025-05-24 05:59:27] 2025-05-24 09:59:13,831 | INFO     | -- intersect: 66382001810.57846
[2025-05-24 05:59:27] 2025-05-24 09:59:13,831 | INFO     | intersect: 66382001810.57846
[2025-05-24 05:59:27] 2025-05-24 09:59:13,831 | INFO     | chi2: 0.02096451319026249
[2025-05-24 05:59:27] 2025-05-24 09:59:13,831 | INFO     | -- intersect: 66382001810.57846
[2025-05-24 05:59:27] 2025-05-24 09:59:13,831 | INFO     | current memory leak: -37.97 B/s (using 78 data points, chi2=0.02)
[2025-05-24 05:59:27] 2025-05-24 09:59:13,832 | INFO     | ..............................
[2025-05-24 05:59:27] 2025-05-24 09:59:13,832 | INFO     | . Timing measurements:
[2025-05-24 05:59:27] 2025-05-24 09:59:13,832 | INFO     | . get job = 0 s
[2025-05-24 05:59:27] 2025-05-24 09:59:13,832 | INFO     | . initial setup = 2 s
[2025-05-24 05:59:27] 2025-05-24 09:59:13,832 | INFO     | . payload setup = 7 s
[2025-05-24 05:59:27] 2025-05-24 09:59:13,832 | INFO     | . stage-in = 0 s
[2025-05-24 05:59:27] 2025-05-24 09:59:13,832 | INFO     | . payload execution = 5145 s
[2025-05-24 05:59:27] 2025-05-24 09:59:13,832 | INFO     | . stage-out = 0 s
[2025-05-24 05:59:27] 2025-05-24 09:59:13,832 | INFO     | . log creation = 0 s
[2025-05-24 05:59:27] 2025-05-24 09:59:13,832 | INFO     | ..............................
[2025-05-24 05:59:27] 2025-05-24 09:59:13,890 | INFO     | 
[2025-05-24 05:59:27] 2025-05-24 09:59:13,891 | INFO     | job summary report
[2025-05-24 05:59:27] 2025-05-24 09:59:13,891 | INFO     | --------------------------------------------------
[2025-05-24 05:59:27] 2025-05-24 09:59:13,891 | INFO     | PanDA job id: 6665150323
[2025-05-24 05:59:27] 2025-05-24 09:59:13,891 | INFO     | task id: 44871837
[2025-05-24 05:59:27] 2025-05-24 09:59:13,891 | INFO     | errors: (none)
[2025-05-24 05:59:27] 2025-05-24 09:59:13,891 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 05:59:27] 2025-05-24 09:59:13,891 | INFO     | pilot state: finished 
[2025-05-24 05:59:27] 2025-05-24 09:59:13,891 | INFO     | transexitcode: 0
[2025-05-24 05:59:27] 2025-05-24 09:59:13,891 | INFO     | exeerrorcode: 0
[2025-05-24 05:59:27] 2025-05-24 09:59:13,891 | INFO     | exeerrordiag: 
[2025-05-24 05:59:27] 2025-05-24 09:59:13,891 | INFO     | exitcode: 0
[2025-05-24 05:59:27] 2025-05-24 09:59:13,891 | INFO     | exitmsg: OK
[2025-05-24 05:59:27] 2025-05-24 09:59:13,891 | INFO     | cpuconsumptiontime: 38694 s
[2025-05-24 05:59:27] 2025-05-24 09:59:13,891 | INFO     | nevents: 400
[2025-05-24 05:59:27] 2025-05-24 09:59:13,891 | INFO     | neventsw: 0
[2025-05-24 05:59:27] 2025-05-24 09:59:13,891 | INFO     | pid: 20970
[2025-05-24 05:59:27] 2025-05-24 09:59:13,892 | INFO     | pgrp: 20970
[2025-05-24 05:59:27] 2025-05-24 09:59:13,892 | INFO     | corecount: 8
[2025-05-24 05:59:27] 2025-05-24 09:59:13,892 | INFO     | event service: False
[2025-05-24 05:59:27] 2025-05-24 09:59:13,892 | INFO     | sizes: {0: 2393564, 1: 2393763, 5: 2393969, 11: 2394025, 5155: 2420368, 5156: 2420367, 5157: 2429548, 5169: 2429662}
[2025-05-24 05:59:27] 2025-05-24 09:59:13,892 | INFO     | --------------------------------------------------
[2025-05-24 05:59:27] 2025-05-24 09:59:13,892 | INFO     | 
[2025-05-24 05:59:27] 2025-05-24 09:59:13,892 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-24 05:59:27] 2025-05-24 09:59:13,913 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 05:59:27] 2025-05-24 09:59:13,913 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 05:59:27] 2025-05-24 09:59:13,913 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 05:59:27] 2025-05-24 09:59:13,913 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 05:59:27] 2025-05-24 09:59:13,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 05:59:27] 2025-05-24 09:59:13,913 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 05:59:27] 2025-05-24 09:59:13,913 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 05:59:27] 2025-05-24 09:59:13,913 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 05:59:27] 2025-05-24 09:59:13,913 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 05:59:27] 2025-05-24 09:59:13,913 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 05:59:27] 2025-05-24 09:59:13,913 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 05:59:27] 2025-05-24 09:59:13,914 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 05:59:27] 2025-05-24 09:59:13,914 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 05:59:27] 2025-05-24 09:59:13,914 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 05:59:27] 2025-05-24 09:59:13,914 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 05:59:27] 2025-05-24 09:59:13,914 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 05:59:27] 2025-05-24 09:59:13,914 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 05:59:27] 2025-05-24 09:59:13,914 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 05:59:27] 2025-05-24 09:59:13,914 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 05:59:27] 2025-05-24 09:59:13,914 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 05:59:27] 2025-05-24 09:59:13,914 | INFO     | job 6665150323 has completed (purged errors)
[2025-05-24 05:59:27] 2025-05-24 09:59:13,914 | INFO     | overall cleanup function is called
[2025-05-24 05:59:27] 2025-05-24 09:59:14,921 | INFO     | --- collectZombieJob: --- 10, [20970]
[2025-05-24 05:59:27] 2025-05-24 09:59:14,922 | INFO     | zombie collector waiting for pid 20970
[2025-05-24 05:59:27] 2025-05-24 09:59:14,922 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 05:59:27] 2025-05-24 09:59:14,922 | INFO     | collected zombie processes
[2025-05-24 05:59:27] 2025-05-24 09:59:14,922 | INFO     | will attempt to kill all subprocesses of pid=20970
[2025-05-24 05:59:27] 2025-05-24 09:59:15,038 | INFO     | process IDs to be killed: [20970] (in reverse order)
[2025-05-24 05:59:27] 2025-05-24 09:59:15,083 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 05:59:27] 2025-05-24 09:59:15,084 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 05:59:27] 2025-05-24 09:59:15,087 | INFO     | did not find any defunct processes belonging to 20970
[2025-05-24 05:59:27] 2025-05-24 09:59:15,091 | INFO     | did not find any defunct processes belonging to 20970
[2025-05-24 05:59:27] 2025-05-24 09:59:15,091 | INFO     | ready for new job
[2025-05-24 05:59:27] 2025-05-24 09:59:15,091 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 05:59:27] 2025-05-24 09:59:15,093 | INFO     | **************************************
[2025-05-24 05:59:27] 2025-05-24 09:59:15,093 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 05:59:27] 2025-05-24 09:59:15,093 | INFO     | **************************************
[2025-05-24 05:59:27] 2025-05-24 09:59:15,094 | INFO     | 
[2025-05-24 05:59:27] 2025-05-24 09:59:15,095 | INFO     | architecture information:
[2025-05-24 05:59:27] 2025-05-24 09:59:15,095 | INFO     | executing command: cat /etc/os-release
[2025-05-24 05:59:27] 2025-05-24 09:59:15,110 | INFO     | cat /etc/os-release:
[2025-05-24 05:59:27] NAME="CentOS Linux"
[2025-05-24 05:59:27] VERSION="7 (Core)"
[2025-05-24 05:59:27] ID="centos"
[2025-05-24 05:59:27] ID_LIKE="rhel fedora"
[2025-05-24 05:59:27] VERSION_ID="7"
[2025-05-24 05:59:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 05:59:27] ANSI_COLOR="0;31"
[2025-05-24 05:59:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 05:59:27] HOME_URL="https://www.centos.org/"
[2025-05-24 05:59:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 05:59:27] 
[2025-05-24 05:59:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 05:59:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 05:59:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 05:59:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 05:59:27] 
[2025-05-24 05:59:27] 2025-05-24 09:59:15,111 | INFO     | **************************************
[2025-05-24 05:59:27] 2025-05-24 09:59:15,613 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-24 05:59:27] 2025-05-24 09:59:15,630 | INFO     | sufficient remaining disk space (32826720256 B)
[2025-05-24 05:59:27] 2025-05-24 09:59:15,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 05:59:27] 2025-05-24 09:59:15,630 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 05:59:27] 2025-05-24 09:59:15,631 | INFO     | update_server=False
[2025-05-24 05:59:27] 2025-05-24 09:59:15,631 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 05:59:27] 2025-05-24 09:59:15,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 05:59:27] 2025-05-24 09:59:15,631 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 05:59:27] 2025-05-24 09:59:15,631 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 05:59:27] 2025-05-24 09:59:15,632 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 05:59:27] 2025-05-24 09:59:15,633 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 05:59:27] 2025-05-24 09:59:15,633 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 05:59:27] 2025-05-24 09:59:16,128 | INFO     | all job control threads have been joined
[2025-05-24 05:59:27] 2025-05-24 09:59:16,294 | INFO     | all data control threads have been joined
[2025-05-24 05:59:27] 2025-05-24 09:59:16,363 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 05:59:27] 2025-05-24 09:59:16,363 | INFO     | aborting loop
[2025-05-24 05:59:27] 2025-05-24 09:59:16,636 | INFO     | [job] retrieve thread has finished
[2025-05-24 05:59:27] 2025-05-24 09:59:16,637 | INFO     | [job] queue monitor thread has finished
[2025-05-24 05:59:27] 2025-05-24 09:59:16,672 | INFO     | all payload control threads have been joined
[2025-05-24 05:59:27] 2025-05-24 09:59:17,041 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 05:59:27] 2025-05-24 09:59:17,129 | INFO     | [job] control thread has finished
[2025-05-24 05:59:27] 2025-05-24 09:59:17,299 | INFO     | [data] control thread has finished
[2025-05-24 05:59:27] 2025-05-24 09:59:17,350 | INFO     | [payload] failed_post thread has finished
[2025-05-24 05:59:27] 2025-05-24 09:59:17,369 | INFO     | [job] job monitor thread has finished
[2025-05-24 05:59:27] 2025-05-24 09:59:17,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 05:59:27] 2025-05-24 09:59:17,638 | INFO     | [data] copytool_out thread has finished
[2025-05-24 05:59:27] 2025-05-24 09:59:17,678 | INFO     | [payload] control thread has finished
[2025-05-24 05:59:27] 2025-05-24 09:59:17,894 | INFO     | [job] validate thread has finished
[2025-05-24 05:59:27] 2025-05-24 09:59:17,899 | INFO     | [data] copytool_in thread has finished
[2025-05-24 05:59:27] 2025-05-24 09:59:17,900 | INFO     | [payload] validate_post thread has finished
[2025-05-24 05:59:27] 2025-05-24 09:59:17,900 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 05:59:27] 2025-05-24 09:59:17,900 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 05:59:27] 2025-05-24 09:59:17,947 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 05:59:27] 2025-05-24 09:59:21,559 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 05:59:27] 2025-05-24 09:59:22,440 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140068948662080)>', '<ExcThread(monitor, started 140068656236288)>']
[2025-05-24 05:59:27] 2025-05-24 09:59:22,666 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 05:59:27] 2025-05-24 09:59:22,666 | INFO     | [monitor] control thread has ended
[2025-05-24 05:59:27] 2025-05-24 09:59:27,456 | INFO     | all workflow threads have been joined
[2025-05-24 05:59:27] 2025-05-24 09:59:27,456 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 05:59:27] 2025-05-24 09:59:27,456 | INFO     | traces error code: 0
[2025-05-24 05:59:27] 2025-05-24 09:59:27,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 05:59:27] 2025-05-24 09:59:27,555 [wrapper] ==== pilot stdout END ====
[2025-05-24 05:59:27] 2025-05-24 09:59:27,559 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 05:59:27] 2025-05-24 09:59:27,563 [wrapper] pilotpid: 14495
[2025-05-24 05:59:27] 2025-05-24 09:59:27,566 [wrapper] Pilot exit status: 0
[2025-05-24 05:59:27] 2025-05-24 09:59:27,577 [wrapper] pandaids: 6665150323
[2025-05-24 05:59:27] 2025-05-24 09:59:27,619 [wrapper] cleanup supervisor_pilot 31736 14496
[2025-05-24 05:59:27] 2025-05-24 09:59:27,623 [wrapper] Test setup, not cleaning
[2025-05-24 05:59:27] 2025-05-24 09:59:27,626 [wrapper] apfmon messages muted
[2025-05-24 05:59:27] 2025-05-24 09:59:27,630 [wrapper] ==== wrapper stdout END ====
[2025-05-24 05:59:27] 2025-05-24 09:59:27,634 [wrapper] ==== wrapper stderr END ====
[2025-05-24 05:59:27]  *** Error codes and diagnostics ***
[2025-05-24 05:59:27]     "exeErrorCode": 0,
[2025-05-24 05:59:27]     "exeErrorDiag": "",
[2025-05-24 05:59:27]     "pilotErrorCode": 0,
[2025-05-24 05:59:27]     "pilotErrorDiag": "",
[2025-05-24 05:59:27]  *** Listing of results directory ***
[2025-05-24 05:59:27] total 418044
[2025-05-24 05:59:27] -rw-r--r-- 1 boincer umatlas    495897 May 24 00:11 pilot3.tar.gz
[2025-05-24 05:59:27] -rwx------ 1 boincer umatlas     37140 May 24 00:17 runpilot2-wrapper.sh
[2025-05-24 05:59:27] -rw-r--r-- 1 boincer umatlas      5111 May 24 00:17 queuedata.json
[2025-05-24 05:59:27] -rw-r--r-- 1 boincer umatlas       100 May 24 04:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 05:59:27] -rwxr-xr-x 1 boincer umatlas      7986 May 24 04:32 run_atlas
[2025-05-24 05:59:27] -rw-r--r-- 1 boincer umatlas       105 May 24 04:32 job.xml
[2025-05-24 05:59:27] -rw-r--r-- 2 boincer umatlas 222762483 May 24 04:32 EVNT.44871834._000105.pool.root.1
[2025-05-24 05:59:27] -rw-r--r-- 2 boincer umatlas     15093 May 24 04:32 start_atlas.sh
[2025-05-24 05:59:27] drwxrwx--x 2 boincer umatlas      4096 May 24 04:32 shared
[2025-05-24 05:59:27] -rw-r--r-- 2 boincer umatlas    508870 May 24 04:32 input.tar.gz
[2025-05-24 05:59:27] -rw-r--r-- 1 boincer umatlas         0 May 24 04:32 boinc_lockfile
[2025-05-24 05:59:27] -rw-r--r-- 1 boincer umatlas      2556 May 24 04:32 pandaJob.out
[2025-05-24 05:59:27] -rw------- 1 boincer umatlas    988612 May 24 04:32 agis_schedconf.cvmfs.json
[2025-05-24 05:59:27] -rw------- 1 boincer umatlas   1596740 May 24 04:32 agis_ddmendpoints.agis.ALL.json
[2025-05-24 05:59:27] drwx------ 4 boincer umatlas      4096 May 24 04:32 pilot3
[2025-05-24 05:59:27] -rw-r--r-- 1 boincer umatlas      6048 May 24 05:55 init_data.xml
[2025-05-24 05:59:27] -rw------- 1 boincer umatlas 199849496 May 24 05:58 HITS.44871837._002613.pool.root.1
[2025-05-24 05:59:27] -rw------- 1 boincer umatlas        95 May 24 05:58 pilot_heartbeat.json
[2025-05-24 05:59:27] -rw------- 1 boincer umatlas      1044 May 24 05:58 memory_monitor_summary.json
[2025-05-24 05:59:27] -rw------- 1 boincer umatlas    311151 May 24 05:59 log.44871837._002613.job.log.tgz.1
[2025-05-24 05:59:27] -rw-r--r-- 1 boincer umatlas       529 May 24 05:59 boinc_task_state.xml
[2025-05-24 05:59:27] -rw------- 1 boincer umatlas      7736 May 24 05:59 heartbeat.json
[2025-05-24 05:59:27] -rw-r--r-- 1 boincer umatlas        27 May 24 05:59 wrapper_checkpoint.txt
[2025-05-24 05:59:27] -rw-r--r-- 1 boincer umatlas      8192 May 24 05:59 boinc_mmap_file
[2025-05-24 05:59:27] -rw------- 1 boincer umatlas      4476 May 24 05:59 pilotlog.txt
[2025-05-24 05:59:27] -rw------- 1 boincer umatlas    504903 May 24 05:59 log.44871837._002613.job.log.1
[2025-05-24 05:59:27] -rw------- 1 boincer umatlas       357 May 24 05:59 output.list
[2025-05-24 05:59:27] -rw-r--r-- 1 boincer umatlas       620 May 24 05:59 runtime_log
[2025-05-24 05:59:27] -rw------- 1 boincer umatlas    839680 May 24 05:59 result.tar.gz
[2025-05-24 05:59:27] -rw------- 1 boincer umatlas       657 May 24 05:59 SxUKDmPVvc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmJ7KKDmA7pPQm.diag
[2025-05-24 05:59:27] -rw-r--r-- 1 boincer umatlas      8659 May 24 05:59 runtime_log.err
[2025-05-24 05:59:27] -rw-r--r-- 1 boincer umatlas     21769 May 24 05:59 stderr.txt
[2025-05-24 05:59:27] HITS file was successfully produced:
[2025-05-24 05:59:27] -rw------- 1 boincer umatlas 199849496 May 24 05:58 shared/HITS.pool.root.1
[2025-05-24 05:59:27]  *** Contents of shared directory: ***
[2025-05-24 05:59:27] total 414052
[2025-05-24 05:59:27] -rw-r--r-- 2 boincer umatlas 222762483 May 24 04:32 ATLAS.root_0
[2025-05-24 05:59:27] -rw-r--r-- 2 boincer umatlas     15093 May 24 04:32 start_atlas.sh
[2025-05-24 05:59:27] -rw-r--r-- 2 boincer umatlas    508870 May 24 04:32 input.tar.gz
[2025-05-24 05:59:27] -rw------- 1 boincer umatlas 199849496 May 24 05:58 HITS.pool.root.1
[2025-05-24 05:59:27] -rw------- 1 boincer umatlas    839680 May 24 05:59 result.tar.gz
05:59:29 (10906): run_atlas exited; CPU time 38703.543840
05:59:29 (10906): called boinc_finish(0)

</stderr_txt>
]]>

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