Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:12:01 (3865655): wrapper (7.7.26015): starting
04:12:01 (3865655): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 04:12:01] Arguments: --nthreads 8
[2025-05-24 04:12:01] Threads: 8
[2025-05-24 04:12:01] Checking for CVMFS
[2025-05-24 04:12:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 04:12:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 04:12:02] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 04:12:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 04:12:02] 2.12.6.0 2000804 7157 288008 146359 2 866 25921516 32935936 28768 16776704 0 30300417 99.548 36323199 24164 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 04:12:02] CVMFS is ok
[2025-05-24 04:12:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 04:12:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 04:12:02] Further information can be found at the LHC@home message board.
[2025-05-24 04:12:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 04:12:02] Checking for apptainer binary...
[2025-05-24 04:12:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 04:12:02] Running /usr/bin/apptainer --version
[2025-05-24 04:12:02] apptainer version 1.4.1-1.el9
[2025-05-24 04:12:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 04:12:02] c6-12-27-3.aglt2.org
[2025-05-24 04:12:02] apptainer works
[2025-05-24 04:12:02] Set ATHENA_PROC_NUMBER=8
[2025-05-24 04:12:02] Set ATHENA_CORE_NUMBER=8
[2025-05-24 04:12:02] Starting ATLAS job with PandaID=6665271788
[2025-05-24 04:12:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 12:14:04]  *** The last 200 lines of the pilot log: ***
[2025-05-24 12:14:04] 2025-05-24 16:13:42,663 | INFO     | extracted standard info from prmon json
[2025-05-24 12:14:04] 2025-05-24 16:13:42,663 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 12:14:04] 2025-05-24 16:13:42,663 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 12:14:04] 2025-05-24 16:13:42,664 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 12:14:04] 2025-05-24 16:13:42,664 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 12:14:04] 2025-05-24 16:13:42,686 | INFO     | fitting pss+swap vs Time
[2025-05-24 12:14:04] 2025-05-24 16:13:42,695 | INFO     | sum of square deviations: 32606376235.550602
[2025-05-24 12:14:04] 2025-05-24 16:13:42,708 | INFO     | sum of deviations: 153758934435.2754
[2025-05-24 12:14:04] 2025-05-24 16:13:42,709 | INFO     | mean x: 1748088764.072034
[2025-05-24 12:14:04] 2025-05-24 16:13:42,709 | INFO     | mean y: 2127531.786016949
[2025-05-24 12:14:04] 2025-05-24 16:13:42,709 | INFO     | -- intersect: -8241176284.629467
[2025-05-24 12:14:04] 2025-05-24 16:13:42,709 | INFO     | intersect: -8241176284.629467
[2025-05-24 12:14:04] 2025-05-24 16:13:42,710 | INFO     | chi2: 3.07441748490493
[2025-05-24 12:14:04] 2025-05-24 16:13:42,710 | INFO     | sum of square deviations: 31581174243.897156
[2025-05-24 12:14:04] 2025-05-24 16:13:42,724 | INFO     | sum of deviations: 180347434616.42172
[2025-05-24 12:14:04] 2025-05-24 16:13:42,724 | INFO     | mean x: 1748088611.5781584
[2025-05-24 12:14:04] 2025-05-24 16:13:42,724 | INFO     | mean y: 2131451.0021413276
[2025-05-24 12:14:04] 2025-05-24 16:13:42,724 | INFO     | -- intersect: -9980502321.433529
[2025-05-24 12:14:04] 2025-05-24 16:13:42,724 | INFO     | intersect: -9980502321.433529
[2025-05-24 12:14:04] 2025-05-24 16:13:42,725 | INFO     | chi2: 2.2566420294772263
[2025-05-24 12:14:04] 2025-05-24 16:13:42,725 | INFO     | current chi2=2.2566420294772263 (change=26.599362625372 %)
[2025-05-24 12:14:04] 2025-05-24 16:13:42,726 | INFO     | sum of square deviations: 30577636372.03673
[2025-05-24 12:14:04] 2025-05-24 16:13:42,736 | INFO     | sum of deviations: 176974110956.9373
[2025-05-24 12:14:04] 2025-05-24 16:13:42,736 | INFO     | mean x: 1748088459.0800865
[2025-05-24 12:14:04] 2025-05-24 16:13:42,738 | INFO     | mean y: 2130939.569264069
[2025-05-24 12:14:04] 2025-05-24 16:13:42,738 | INFO     | -- intersect: -10115276343.182535
[2025-05-24 12:14:04] 2025-05-24 16:13:42,738 | INFO     | intersect: -10115276343.182535
[2025-05-24 12:14:04] 2025-05-24 16:13:42,755 | INFO     | chi2: 2.256142682790695
[2025-05-24 12:14:04] 2025-05-24 16:13:42,755 | INFO     | current chi2=2.256142682790695 (change=0.022127864322669933 %)
[2025-05-24 12:14:04] 2025-05-24 16:13:42,755 | INFO     | right removable region: 461
[2025-05-24 12:14:04] 2025-05-24 16:13:42,756 | INFO     | sum of square deviations: 31581038214.051476
[2025-05-24 12:14:04] 2025-05-24 16:13:42,798 | INFO     | sum of deviations: 65921657464.77314
[2025-05-24 12:14:04] 2025-05-24 16:13:42,804 | INFO     | mean x: 1748088916.5760171
[2025-05-24 12:14:04] 2025-05-24 16:13:42,804 | INFO     | mean y: 2140569.3725910066
[2025-05-24 12:14:04] 2025-05-24 16:13:42,804 | INFO     | -- intersect: -3646786929.3192596
[2025-05-24 12:14:04] 2025-05-24 16:13:42,804 | INFO     | intersect: -3646786929.3192596
[2025-05-24 12:14:04] 2025-05-24 16:13:42,805 | INFO     | chi2: 1.1864999118236907
[2025-05-24 12:14:04] 2025-05-24 16:13:42,805 | INFO     | current chi2=1.1864999118236907 (change=61.40732617969804 %)
[2025-05-24 12:14:04] 2025-05-24 16:13:42,812 | INFO     | sum of square deviations: 30577449895.194805
[2025-05-24 12:14:04] 2025-05-24 16:13:42,820 | INFO     | sum of deviations: 36034040780.76619
[2025-05-24 12:14:04] 2025-05-24 16:13:42,820 | INFO     | mean x: 1748089069.077922
[2025-05-24 12:14:04] 2025-05-24 16:13:42,821 | INFO     | mean y: 2145099.5064935065
[2025-05-24 12:14:04] 2025-05-24 16:13:42,821 | INFO     | -- intersect: -2057893033.8063936
[2025-05-24 12:14:04] 2025-05-24 16:13:42,821 | INFO     | intersect: -2057893033.8063936
[2025-05-24 12:14:04] 2025-05-24 16:13:42,821 | INFO     | chi2: 0.9722011481678363
[2025-05-24 12:14:04] 2025-05-24 16:13:42,822 | INFO     | current chi2=0.9722011481678363 (change=18.061422636472845 %)
[2025-05-24 12:14:04] 2025-05-24 16:13:42,822 | INFO     | left removable region: 20
[2025-05-24 12:14:04] 2025-05-24 16:13:42,822 | INFO     | sum of square deviations: 26594395322.154125
[2025-05-24 12:14:04] 2025-05-24 16:13:42,835 | INFO     | sum of deviations: 57676723710.60544
[2025-05-24 12:14:04] 2025-05-24 16:13:42,835 | INFO     | mean x: 1748089038.596372
[2025-05-24 12:14:04] 2025-05-24 16:13:42,835 | INFO     | mean y: 2149287.5034013605
[2025-05-24 12:14:04] 2025-05-24 16:13:42,836 | INFO     | -- intersect: -3789027284.8276353
[2025-05-24 12:14:04] 2025-05-24 16:13:42,836 | INFO     | intersect: -3789027284.8276353
[2025-05-24 12:14:04] 2025-05-24 16:13:42,836 | INFO     | chi2: 0.13960062751401997
[2025-05-24 12:14:04] 2025-05-24 16:13:42,837 | INFO     | -- intersect: -3789027284.8276353
[2025-05-24 12:14:04] 2025-05-24 16:13:42,837 | INFO     | current memory leak: 2.17 B/s (using 441 data points, chi2=0.14)
[2025-05-24 12:14:04] 2025-05-24 16:13:42,838 | INFO     | ..............................
[2025-05-24 12:14:04] 2025-05-24 16:13:42,838 | INFO     | . Timing measurements:
[2025-05-24 12:14:04] 2025-05-24 16:13:42,838 | INFO     | . get job = 0 s
[2025-05-24 12:14:04] 2025-05-24 16:13:42,838 | INFO     | . initial setup = 3 s
[2025-05-24 12:14:04] 2025-05-24 16:13:42,838 | INFO     | . payload setup = 17 s
[2025-05-24 12:14:04] 2025-05-24 16:13:42,838 | INFO     | . stage-in = 0 s
[2025-05-24 12:14:04] 2025-05-24 16:13:42,838 | INFO     | . payload execution = 28798 s
[2025-05-24 12:14:04] 2025-05-24 16:13:42,838 | INFO     | . stage-out = 5 s
[2025-05-24 12:14:04] 2025-05-24 16:13:42,838 | INFO     | . log creation = 0 s
[2025-05-24 12:14:04] 2025-05-24 16:13:42,838 | INFO     | ..............................
[2025-05-24 12:14:04] 2025-05-24 16:13:42,982 | INFO     | 
[2025-05-24 12:14:04] 2025-05-24 16:13:42,982 | INFO     | job summary report
[2025-05-24 12:14:04] 2025-05-24 16:13:42,982 | INFO     | --------------------------------------------------
[2025-05-24 12:14:04] 2025-05-24 16:13:42,982 | INFO     | PanDA job id: 6665271788
[2025-05-24 12:14:04] 2025-05-24 16:13:42,982 | INFO     | task id: 44871837
[2025-05-24 12:14:04] 2025-05-24 16:13:42,982 | INFO     | errors: (none)
[2025-05-24 12:14:04] 2025-05-24 16:13:42,982 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 12:14:04] 2025-05-24 16:13:42,982 | INFO     | pilot state: finished 
[2025-05-24 12:14:04] 2025-05-24 16:13:42,983 | INFO     | transexitcode: 0
[2025-05-24 12:14:04] 2025-05-24 16:13:42,983 | INFO     | exeerrorcode: 0
[2025-05-24 12:14:04] 2025-05-24 16:13:42,983 | INFO     | exeerrordiag: 
[2025-05-24 12:14:04] 2025-05-24 16:13:42,983 | INFO     | exitcode: 0
[2025-05-24 12:14:04] 2025-05-24 16:13:42,983 | INFO     | exitmsg: OK
[2025-05-24 12:14:04] 2025-05-24 16:13:42,983 | INFO     | cpuconsumptiontime: 54215 s
[2025-05-24 12:14:04] 2025-05-24 16:13:42,983 | INFO     | nevents: 400
[2025-05-24 12:14:04] 2025-05-24 16:13:42,983 | INFO     | neventsw: 0
[2025-05-24 12:14:04] 2025-05-24 16:13:42,983 | INFO     | pid: 3879891
[2025-05-24 12:14:04] 2025-05-24 16:13:42,983 | INFO     | pgrp: 3879891
[2025-05-24 12:14:04] 2025-05-24 16:13:42,983 | INFO     | corecount: 8
[2025-05-24 12:14:04] 2025-05-24 16:13:42,983 | INFO     | event service: False
[2025-05-24 12:14:04] 2025-05-24 16:13:42,983 | INFO     | sizes: {0: 2393735, 1: 2393763, 9: 2393969, 12: 2393997, 28820: 2430292, 28821: 2430291, 28827: 2439444, 28829: 2439500, 28856: 2439670}
[2025-05-24 12:14:04] 2025-05-24 16:13:42,984 | INFO     | --------------------------------------------------
[2025-05-24 12:14:04] 2025-05-24 16:13:42,984 | INFO     | 
[2025-05-24 12:14:04] 2025-05-24 16:13:42,984 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-05-24 12:14:04] 2025-05-24 16:13:43,118 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 12:14:04] 2025-05-24 16:13:43,118 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 12:14:04] 2025-05-24 16:13:43,118 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 12:14:04] 2025-05-24 16:13:43,118 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 12:14:04] 2025-05-24 16:13:43,119 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 12:14:04] 2025-05-24 16:13:43,119 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 12:14:04] 2025-05-24 16:13:43,119 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 12:14:04] 2025-05-24 16:13:43,119 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 12:14:04] 2025-05-24 16:13:43,119 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 12:14:04] 2025-05-24 16:13:43,119 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 12:14:04] 2025-05-24 16:13:43,119 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 12:14:04] 2025-05-24 16:13:43,119 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 12:14:04] 2025-05-24 16:13:43,119 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 12:14:04] 2025-05-24 16:13:43,119 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 12:14:04] 2025-05-24 16:13:43,119 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 12:14:04] 2025-05-24 16:13:43,120 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 12:14:04] 2025-05-24 16:13:43,135 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 12:14:04] 2025-05-24 16:13:43,135 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 12:14:04] 2025-05-24 16:13:43,135 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 12:14:04] 2025-05-24 16:13:43,135 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 12:14:04] 2025-05-24 16:13:43,135 | INFO     | job 6665271788 has completed (purged errors)
[2025-05-24 12:14:04] 2025-05-24 16:13:43,135 | INFO     | overall cleanup function is called
[2025-05-24 12:14:04] 2025-05-24 16:13:44,159 | INFO     | --- collectZombieJob: --- 10, [3879891]
[2025-05-24 12:14:04] 2025-05-24 16:13:44,159 | INFO     | zombie collector waiting for pid 3879891
[2025-05-24 12:14:04] 2025-05-24 16:13:44,159 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 12:14:04] 2025-05-24 16:13:44,159 | INFO     | collected zombie processes
[2025-05-24 12:14:04] 2025-05-24 16:13:44,159 | INFO     | will attempt to kill all subprocesses of pid=3879891
[2025-05-24 12:14:04] 2025-05-24 16:13:48,657 | INFO     | PID=3870996 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-24 12:14:04] 2025-05-24 16:13:48,657 | INFO     | .. there are 52 such processes running
[2025-05-24 12:14:04] 2025-05-24 16:13:48,806 | INFO     | process IDs to be killed: [3879891] (in reverse order)
[2025-05-24 12:14:04] 2025-05-24 16:13:49,789 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 12:14:04] 2025-05-24 16:13:49,789 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 12:14:04] 2025-05-24 16:13:49,867 | INFO     | did not find any defunct processes belonging to 3879891
[2025-05-24 12:14:04] 2025-05-24 16:13:49,922 | INFO     | did not find any defunct processes belonging to 3879891
[2025-05-24 12:14:04] 2025-05-24 16:13:49,922 | INFO     | ready for new job
[2025-05-24 12:14:04] 2025-05-24 16:13:49,923 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 12:14:04] 2025-05-24 16:13:49,933 | INFO     | **************************************
[2025-05-24 12:14:04] 2025-05-24 16:13:49,933 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 12:14:04] 2025-05-24 16:13:49,934 | INFO     | **************************************
[2025-05-24 12:14:04] 2025-05-24 16:13:49,934 | INFO     | 
[2025-05-24 12:14:04] 2025-05-24 16:13:49,944 | INFO     | architecture information:
[2025-05-24 12:14:04] 2025-05-24 16:13:49,949 | INFO     | executing command: cat /etc/os-release
[2025-05-24 12:14:04] 2025-05-24 16:13:49,983 | INFO     | cat /etc/os-release:
[2025-05-24 12:14:04] NAME="CentOS Linux"
[2025-05-24 12:14:04] VERSION="7 (Core)"
[2025-05-24 12:14:04] ID="centos"
[2025-05-24 12:14:04] ID_LIKE="rhel fedora"
[2025-05-24 12:14:04] VERSION_ID="7"
[2025-05-24 12:14:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 12:14:04] ANSI_COLOR="0;31"
[2025-05-24 12:14:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 12:14:04] HOME_URL="https://www.centos.org/"
[2025-05-24 12:14:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 12:14:04] 
[2025-05-24 12:14:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 12:14:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 12:14:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 12:14:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 12:14:04] 
[2025-05-24 12:14:04] 2025-05-24 16:13:49,983 | INFO     | **************************************
[2025-05-24 12:14:04] 2025-05-24 16:13:50,487 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-05-24 12:14:04] 2025-05-24 16:13:50,609 | INFO     | sufficient remaining disk space (93312778240 B)
[2025-05-24 12:14:04] 2025-05-24 16:13:50,609 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 12:14:04] 2025-05-24 16:13:50,609 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 12:14:04] 2025-05-24 16:13:50,609 | INFO     | update_server=False
[2025-05-24 12:14:04] 2025-05-24 16:13:50,609 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 12:14:04] 2025-05-24 16:13:50,610 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 12:14:04] 2025-05-24 16:13:50,610 | INFO     | aborting loop
[2025-05-24 12:14:04] 2025-05-24 16:13:50,665 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 12:14:04] 2025-05-24 16:13:50,665 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 12:14:04] 2025-05-24 16:13:50,665 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 12:14:04] 2025-05-24 16:13:50,847 | INFO     | all data control threads have been joined
[2025-05-24 12:14:04] 2025-05-24 16:13:51,618 | INFO     | [job] job monitor thread has finished
[2025-05-24 12:14:04] 2025-05-24 16:13:51,619 | INFO     | [job] retrieve thread has finished
[2025-05-24 12:14:04] 2025-05-24 16:13:51,689 | INFO     | all job control threads have been joined
[2025-05-24 12:14:04] 2025-05-24 16:13:51,826 | INFO     | [job] validate thread has finished
[2025-05-24 12:14:04] 2025-05-24 16:13:51,826 | INFO     | [data] copytool_in thread has finished
[2025-05-24 12:14:04] 2025-05-24 16:13:51,833 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 12:14:04] 2025-05-24 16:13:51,844 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 12:14:04] 2025-05-24 16:13:51,864 | INFO     | [data] control thread has finished
[2025-05-24 12:14:04] 2025-05-24 16:13:51,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 12:14:04] 2025-05-24 16:13:51,938 | INFO     | all payload control threads have been joined
[2025-05-24 12:14:04] 2025-05-24 16:13:51,977 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 12:14:04] 2025-05-24 16:13:52,013 | INFO     | [payload] failed_post thread has finished
[2025-05-24 12:14:04] 2025-05-24 16:13:52,114 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 12:14:04] 2025-05-24 16:13:52,499 | INFO     | [payload] validate_post thread has finished
[2025-05-24 12:14:04] 2025-05-24 16:13:52,705 | INFO     | [job] control thread has finished
[2025-05-24 12:14:04] 2025-05-24 16:13:52,930 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 12:14:04] 2025-05-24 16:13:52,944 | INFO     | [payload] control thread has finished
[2025-05-24 12:14:04] 2025-05-24 16:13:53,120 | INFO     | [job] queue monitor thread has finished
[2025-05-24 12:14:04] 2025-05-24 16:13:53,135 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 12:14:04] 2025-05-24 16:13:53,895 | INFO     | [data] copytool_out thread has finished
[2025-05-24 12:14:04] 2025-05-24 16:13:57,144 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 12:14:04] 2025-05-24 16:13:57,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140596043720512)>', '<ExcThread(monitor, started 140595393709824)>']
[2025-05-24 12:14:04] 2025-05-24 16:13:58,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 12:14:04] 2025-05-24 16:13:58,712 | INFO     | [monitor] control thread has ended
[2025-05-24 12:14:04] 2025-05-24 16:14:02,793 | INFO     | all workflow threads have been joined
[2025-05-24 12:14:04] 2025-05-24 16:14:02,793 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 12:14:04] 2025-05-24 16:14:02,793 | INFO     | traces error code: 0
[2025-05-24 12:14:04] 2025-05-24 16:14:02,793 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 12:14:04] 2025-05-24 16:14:03,154 [wrapper] ==== pilot stdout END ====
[2025-05-24 12:14:04] 2025-05-24 16:14:03,170 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 12:14:04] 2025-05-24 16:14:03,218 [wrapper] pilotpid: 3870996
[2025-05-24 12:14:04] 2025-05-24 16:14:03,250 [wrapper] Pilot exit status: 0
[2025-05-24 12:14:04] 2025-05-24 16:14:03,321 [wrapper] pandaids: 6665271788
[2025-05-24 12:14:04] 2025-05-24 16:14:03,721 [wrapper] cleanup supervisor_pilot 2518463 3870997
[2025-05-24 12:14:04] 2025-05-24 16:14:03,743 [wrapper] Test setup, not cleaning
[2025-05-24 12:14:04] 2025-05-24 16:14:03,767 [wrapper] apfmon messages muted
[2025-05-24 12:14:04] 2025-05-24 16:14:03,789 [wrapper] ==== wrapper stdout END ====
[2025-05-24 12:14:04] 2025-05-24 16:14:03,802 [wrapper] ==== wrapper stderr END ====
[2025-05-24 12:14:04]  *** Error codes and diagnostics ***
[2025-05-24 12:14:04]     "exeErrorCode": 0,
[2025-05-24 12:14:04]     "exeErrorDiag": "",
[2025-05-24 12:14:04]     "pilotErrorCode": 0,
[2025-05-24 12:14:04]     "pilotErrorDiag": "",
[2025-05-24 12:14:04]  *** Listing of results directory ***
[2025-05-24 12:14:04] total 412140
[2025-05-24 12:14:04] -rw-r--r--. 1 boincer umatlas    495897 May 24 01:59 pilot3.tar.gz
[2025-05-24 12:14:04] -rwx------. 1 boincer umatlas     37140 May 24 02:08 runpilot2-wrapper.sh
[2025-05-24 12:14:04] -rw-r--r--. 1 boincer umatlas      5111 May 24 02:08 queuedata.json
[2025-05-24 12:14:04] -rw-r--r--. 1 boincer umatlas       100 May 24 04:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 12:14:04] -rwxr-xr-x. 1 boincer umatlas      7986 May 24 04:12 run_atlas
[2025-05-24 12:14:04] -rw-r--r--. 1 boincer umatlas       105 May 24 04:12 job.xml
[2025-05-24 12:14:04] -rw-r--r--. 2 boincer umatlas 222829505 May 24 04:12 EVNT.44871834._000287.pool.root.1
[2025-05-24 12:14:04] -rw-r--r--. 2 boincer umatlas     15093 May 24 04:12 start_atlas.sh
[2025-05-24 12:14:04] drwxrwx--x. 2 boincer umatlas      4096 May 24 04:12 shared
[2025-05-24 12:14:04] -rw-r--r--. 2 boincer umatlas    508873 May 24 04:12 input.tar.gz
[2025-05-24 12:14:04] -rw-r--r--. 1 boincer umatlas         0 May 24 04:12 boinc_lockfile
[2025-05-24 12:14:04] -rw-r--r--. 1 boincer umatlas      2556 May 24 04:12 pandaJob.out
[2025-05-24 12:14:04] -rw-------. 1 boincer umatlas    988604 May 24 04:12 agis_schedconf.cvmfs.json
[2025-05-24 12:14:04] drwx------. 4 boincer umatlas      4096 May 24 04:12 pilot3
[2025-05-24 12:14:04] -rw-------. 1 boincer umatlas 189882350 May 24 12:11 HITS.44871837._007174.pool.root.1
[2025-05-24 12:14:04] -rw-r--r--. 1 boincer umatlas       531 May 24 12:12 boinc_task_state.xml
[2025-05-24 12:14:04] -rw-r--r--. 1 boincer umatlas      6858 May 24 12:12 init_data.xml
[2025-05-24 12:14:04] -rw-------. 1 boincer umatlas        95 May 24 12:12 pilot_heartbeat.json
[2025-05-24 12:14:04] -rw-------. 1 boincer umatlas      1054 May 24 12:13 memory_monitor_summary.json
[2025-05-24 12:14:04] -rw-------. 1 boincer umatlas   1596740 May 24 12:13 agis_ddmendpoints.agis.ALL.json
[2025-05-24 12:14:04] -rw-------. 1 boincer umatlas    526300 May 24 12:13 log.44871837._007174.job.log.tgz.1
[2025-05-24 12:14:04] -rw-------. 1 boincer umatlas      7719 May 24 12:13 heartbeat.json
[2025-05-24 12:14:04] -rw-r--r--. 1 boincer umatlas      8192 May 24 12:14 boinc_mmap_file
[2025-05-24 12:14:04] -rw-r--r--. 1 boincer umatlas        28 May 24 12:14 wrapper_checkpoint.txt
[2025-05-24 12:14:04] -rw-------. 1 boincer umatlas      4353 May 24 12:14 pilotlog.txt
[2025-05-24 12:14:04] -rw-------. 1 boincer umatlas   2218543 May 24 12:14 log.44871837._007174.job.log.1
[2025-05-24 12:14:04] -rw-------. 1 boincer umatlas       357 May 24 12:14 output.list
[2025-05-24 12:14:04] -rw-r--r--. 1 boincer umatlas       620 May 24 12:14 runtime_log
[2025-05-24 12:14:04] -rw-------. 1 boincer umatlas   2764800 May 24 12:14 result.tar.gz
[2025-05-24 12:14:04] -rw-r--r--. 1 boincer umatlas      8670 May 24 12:14 runtime_log.err
[2025-05-24 12:14:04] -rw-------. 1 boincer umatlas       659 May 24 12:14 bXLMDmIExc7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhrPKDmmIYtcn.diag
[2025-05-24 12:14:04] -rw-r--r--. 1 boincer umatlas     20989 May 24 12:14 stderr.txt
[2025-05-24 12:14:04] HITS file was successfully produced:
[2025-05-24 12:14:04] -rw-------. 1 boincer umatlas 189882350 May 24 12:11 shared/HITS.pool.root.1
[2025-05-24 12:14:04]  *** Contents of shared directory: ***
[2025-05-24 12:14:04] total 406264
[2025-05-24 12:14:04] -rw-r--r--. 2 boincer umatlas 222829505 May 24 04:12 ATLAS.root_0
[2025-05-24 12:14:04] -rw-r--r--. 2 boincer umatlas     15093 May 24 04:12 start_atlas.sh
[2025-05-24 12:14:04] -rw-r--r--. 2 boincer umatlas    508873 May 24 04:12 input.tar.gz
[2025-05-24 12:14:04] -rw-------. 1 boincer umatlas 189882350 May 24 12:11 HITS.pool.root.1
[2025-05-24 12:14:04] -rw-------. 1 boincer umatlas   2764800 May 24 12:14 result.tar.gz
12:14:05 (3865655): run_atlas exited; CPU time 55872.815675
12:14:05 (3865655): called boinc_finish(0)

</stderr_txt>
]]>

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