Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:05:21 (20974): wrapper (7.7.26015): starting
16:05:21 (20974): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 16:05:21] Arguments: --nthreads 8
[2025-05-24 16:05:21] Threads: 8
[2025-05-24 16:05:21] Checking for CVMFS
[2025-05-24 16:05:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 16:05:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 16:05:22] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 16:05:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 16:05:23] 2.11.2.0 11919 17577 95236 146368 0 59 23071621 25165825 2490 130560 0 9436313 99.745 12145530 2163 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-24 16:05:23] CVMFS is ok
[2025-05-24 16:05:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 16:05:23] Checking for apptainer binary...
[2025-05-24 16:05:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 16:05:23] Running /usr/bin/apptainer --version
[2025-05-24 16:05:23] apptainer version 1.3.2-1.el7
[2025-05-24 16:05:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 16:05:31] cg-vwn425.simple-grid.lan
[2025-05-24 16:05:31] apptainer works
[2025-05-24 16:05:31] Set ATHENA_PROC_NUMBER=8
[2025-05-24 16:05:31] Set ATHENA_CORE_NUMBER=8
[2025-05-24 16:05:31] Starting ATLAS job with PandaID=6665273285
[2025-05-24 16:05:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 21:43:47]  *** The last 200 lines of the pilot log: ***
[2025-05-24 21:43:47] 2025-05-24 19:32:27,124 | INFO     | extracted standard info from prmon json
[2025-05-24 21:43:47] 2025-05-24 19:32:27,124 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 21:43:47] 2025-05-24 19:32:27,124 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 21:43:47] 2025-05-24 19:32:27,125 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 21:43:47] 2025-05-24 19:32:27,125 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 21:43:47] 2025-05-24 19:32:27,131 | INFO     | fitting pss+swap vs Time
[2025-05-24 21:43:47] 2025-05-24 19:32:27,132 | INFO     | sum of square deviations: 9237596457.5
[2025-05-24 21:43:47] 2025-05-24 19:32:27,137 | INFO     | sum of deviations: 139738751718.49994
[2025-05-24 21:43:47] 2025-05-24 19:32:27,138 | INFO     | mean x: 1748105611.5
[2025-05-24 21:43:47] 2025-05-24 19:32:27,138 | INFO     | mean y: 2445459.9903225806
[2025-05-24 21:43:47] 2025-05-24 19:32:27,138 | INFO     | -- intersect: -26441456603.38524
[2025-05-24 21:43:47] 2025-05-24 19:32:27,138 | INFO     | intersect: -26441456603.38524
[2025-05-24 21:43:47] 2025-05-24 19:32:27,139 | INFO     | chi2: 6.494621192869336
[2025-05-24 21:43:47] 2025-05-24 19:32:27,139 | INFO     | sum of square deviations: 8797783560.0
[2025-05-24 21:43:47] 2025-05-24 19:32:27,142 | INFO     | sum of deviations: 157614689752.99997
[2025-05-24 21:43:47] 2025-05-24 19:32:27,143 | INFO     | mean x: 1748105459.0
[2025-05-24 21:43:47] 2025-05-24 19:32:27,143 | INFO     | mean y: 2451565.4360655737
[2025-05-24 21:43:47] 2025-05-24 19:32:27,143 | INFO     | -- intersect: -31315334067.359222
[2025-05-24 21:43:47] 2025-05-24 19:32:27,143 | INFO     | intersect: -31315334067.359222
[2025-05-24 21:43:47] 2025-05-24 19:32:27,143 | INFO     | chi2: 5.760512207514291
[2025-05-24 21:43:47] 2025-05-24 19:32:27,143 | INFO     | current chi2=5.760512207514291 (change=11.303338001622754 %)
[2025-05-24 21:43:47] 2025-05-24 19:32:27,144 | INFO     | right removable region: 304
[2025-05-24 21:43:47] 2025-05-24 19:32:27,144 | INFO     | sum of square deviations: 8797783560.0
[2025-05-24 21:43:47] 2025-05-24 19:32:27,162 | INFO     | sum of deviations: 32415945523.0
[2025-05-24 21:43:47] 2025-05-24 19:32:27,163 | INFO     | mean x: 1748105764.0
[2025-05-24 21:43:47] 2025-05-24 19:32:27,163 | INFO     | mean y: 2482648.3213114752
[2025-05-24 21:43:47] 2025-05-24 19:32:27,163 | INFO     | -- intersect: -6438514771.972839
[2025-05-24 21:43:47] 2025-05-24 19:32:27,163 | INFO     | intersect: -6438514771.972839
[2025-05-24 21:43:47] 2025-05-24 19:32:27,163 | INFO     | chi2: 1.8524472744901042
[2025-05-24 21:43:47] 2025-05-24 19:32:27,164 | INFO     | current chi2=1.8524472744901042 (change=71.47720830086335 %)
[2025-05-24 21:43:47] 2025-05-24 19:32:27,164 | INFO     | sum of square deviations: 8372156975.0
[2025-05-24 21:43:47] 2025-05-24 19:32:27,168 | INFO     | sum of deviations: -12038111002.000002
[2025-05-24 21:43:47] 2025-05-24 19:32:27,168 | INFO     | mean x: 1748105916.5
[2025-05-24 21:43:47] 2025-05-24 19:32:27,168 | INFO     | mean y: 2498487.58
[2025-05-24 21:43:47] 2025-05-24 19:32:27,168 | INFO     | -- intersect: 2516055403.547877
[2025-05-24 21:43:47] 2025-05-24 19:32:27,168 | INFO     | intersect: 2516055403.547877
[2025-05-24 21:43:47] 2025-05-24 19:32:27,169 | INFO     | chi2: 0.829150683759166
[2025-05-24 21:43:47] 2025-05-24 19:32:27,169 | INFO     | current chi2=0.829150683759166 (change=55.24025459848006 %)
[2025-05-24 21:43:47] 2025-05-24 19:32:27,169 | INFO     | sum of square deviations: 7960484140.0
[2025-05-24 21:43:47] 2025-05-24 19:32:27,172 | INFO     | sum of deviations: -8283550266.000002
[2025-05-24 21:43:47] 2025-05-24 19:32:27,172 | INFO     | mean x: 1748106069.0
[2025-05-24 21:43:47] 2025-05-24 19:32:27,172 | INFO     | mean y: 2497077.0576271187
[2025-05-24 21:43:47] 2025-05-24 19:32:27,172 | INFO     | -- intersect: 1821547807.916965
[2025-05-24 21:43:47] 2025-05-24 19:32:27,173 | INFO     | intersect: 1821547807.916965
[2025-05-24 21:43:47] 2025-05-24 19:32:27,173 | INFO     | chi2: 0.8088154827756526
[2025-05-24 21:43:47] 2025-05-24 19:32:27,173 | INFO     | current chi2=0.8088154827756526 (change=2.4525338254946085 %)
[2025-05-24 21:43:47] 2025-05-24 19:32:27,173 | INFO     | left removable region: 30
[2025-05-24 21:43:47] 2025-05-24 19:32:27,174 | INFO     | sum of square deviations: 6378584712.5
[2025-05-24 21:43:47] 2025-05-24 19:32:27,176 | INFO     | sum of deviations: 9616569968.000002
[2025-05-24 21:43:47] 2025-05-24 19:32:27,176 | INFO     | mean x: 1748106343.5
[2025-05-24 21:43:47] 2025-05-24 19:32:27,177 | INFO     | mean y: 2505000.5328467153
[2025-05-24 21:43:47] 2025-05-24 19:32:27,177 | INFO     | -- intersect: -2632999225.166091
[2025-05-24 21:43:47] 2025-05-24 19:32:27,177 | INFO     | intersect: -2632999225.166091
[2025-05-24 21:43:47] 2025-05-24 19:32:27,177 | INFO     | chi2: 0.0004879340204739072
[2025-05-24 21:43:47] 2025-05-24 19:32:27,177 | INFO     | -- intersect: -2632999225.166091
[2025-05-24 21:43:47] 2025-05-24 19:32:27,177 | INFO     | current memory leak: 1.51 B/s (using 274 data points, chi2=0.00)
[2025-05-24 21:43:47] 2025-05-24 19:32:27,178 | INFO     | ..............................
[2025-05-24 21:43:47] 2025-05-24 19:32:27,178 | INFO     | . Timing measurements:
[2025-05-24 21:43:47] 2025-05-24 19:32:27,178 | INFO     | . get job = 0 s
[2025-05-24 21:43:47] 2025-05-24 19:32:27,178 | INFO     | . initial setup = 5 s
[2025-05-24 21:43:47] 2025-05-24 19:32:27,178 | INFO     | . payload setup = 136 s
[2025-05-24 21:43:47] 2025-05-24 19:32:27,179 | INFO     | . stage-in = 0 s
[2025-05-24 21:43:47] 2025-05-24 19:32:27,179 | INFO     | . payload execution = 19009 s
[2025-05-24 21:43:47] 2025-05-24 19:32:27,179 | INFO     | . stage-out = 3 s
[2025-05-24 21:43:47] 2025-05-24 19:32:27,179 | INFO     | . log creation = 1 s
[2025-05-24 21:43:47] 2025-05-24 19:32:27,179 | INFO     | ..............................
[2025-05-24 21:43:47] 2025-05-24 19:32:27,319 | INFO     | 
[2025-05-24 21:43:47] 2025-05-24 19:32:27,319 | INFO     | job summary report
[2025-05-24 21:43:47] 2025-05-24 19:32:27,319 | INFO     | --------------------------------------------------
[2025-05-24 21:43:47] 2025-05-24 19:32:27,320 | INFO     | PanDA job id: 6665273285
[2025-05-24 21:43:47] 2025-05-24 19:32:27,320 | INFO     | task id: 44871837
[2025-05-24 21:43:47] 2025-05-24 19:32:27,320 | INFO     | errors: (none)
[2025-05-24 21:43:47] 2025-05-24 19:32:27,320 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 21:43:47] 2025-05-24 19:32:27,320 | INFO     | pilot state: finished 
[2025-05-24 21:43:47] 2025-05-24 19:32:27,320 | INFO     | transexitcode: 0
[2025-05-24 21:43:47] 2025-05-24 19:32:27,320 | INFO     | exeerrorcode: 0
[2025-05-24 21:43:47] 2025-05-24 19:32:27,320 | INFO     | exeerrordiag: 
[2025-05-24 21:43:47] 2025-05-24 19:32:27,320 | INFO     | exitcode: 0
[2025-05-24 21:43:47] 2025-05-24 19:32:27,320 | INFO     | exitmsg: OK
[2025-05-24 21:43:47] 2025-05-24 19:32:27,320 | INFO     | cpuconsumptiontime: 73073 s
[2025-05-24 21:43:47] 2025-05-24 19:32:27,320 | INFO     | nevents: 400
[2025-05-24 21:43:47] 2025-05-24 19:32:27,320 | INFO     | neventsw: 0
[2025-05-24 21:43:47] 2025-05-24 19:32:27,321 | INFO     | pid: 5830
[2025-05-24 21:43:47] 2025-05-24 19:32:27,321 | INFO     | pgrp: 5830
[2025-05-24 21:43:47] 2025-05-24 19:32:27,321 | INFO     | corecount: 8
[2025-05-24 21:43:47] 2025-05-24 19:32:27,321 | INFO     | event service: False
[2025-05-24 21:43:47] 2025-05-24 19:32:27,321 | INFO     | sizes: {0: 2392907, 1: 2393764, 2: 2393764, 12: 2393792, 23: 2393820, 34: 2393848, 45: 2394004, 55: 2394032, 66: 2394060, 77: 2394088, 88: 2394144, 90: 2394658, 98
[2025-05-24 21:43:47] 2025-05-24 19:32:27,321 | INFO     | --------------------------------------------------
[2025-05-24 21:43:47] 2025-05-24 19:32:27,321 | INFO     | 
[2025-05-24 21:43:47] 2025-05-24 19:32:27,321 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-05-24 21:43:47] 2025-05-24 19:32:27,914 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 21:43:47] 2025-05-24 19:32:27,914 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 21:43:47] 2025-05-24 19:32:27,915 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 21:43:47] 2025-05-24 19:32:27,915 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 21:43:47] 2025-05-24 19:32:27,915 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 21:43:47] 2025-05-24 19:32:27,915 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 21:43:47] 2025-05-24 19:32:27,915 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 21:43:47] 2025-05-24 19:32:27,915 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 21:43:47] 2025-05-24 19:32:27,915 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 21:43:47] 2025-05-24 19:32:27,915 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 21:43:47] 2025-05-24 19:32:27,915 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 21:43:47] 2025-05-24 19:32:27,915 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 21:43:47] 2025-05-24 19:32:27,915 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 21:43:47] 2025-05-24 19:32:27,916 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 21:43:47] 2025-05-24 19:32:27,916 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 21:43:47] 2025-05-24 19:32:27,916 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 21:43:47] 2025-05-24 19:32:27,916 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 21:43:47] 2025-05-24 19:32:27,916 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 21:43:47] 2025-05-24 19:32:27,916 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 21:43:47] 2025-05-24 19:32:27,916 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 21:43:47] 2025-05-24 19:32:27,916 | INFO     | job 6665273285 has completed (purged errors)
[2025-05-24 21:43:47] 2025-05-24 19:32:27,916 | INFO     | overall cleanup function is called
[2025-05-24 21:43:47] 2025-05-24 19:32:28,925 | INFO     | --- collectZombieJob: --- 10, [5830]
[2025-05-24 21:43:47] 2025-05-24 19:32:28,925 | INFO     | zombie collector waiting for pid 5830
[2025-05-24 21:43:47] 2025-05-24 19:32:28,925 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 21:43:47] 2025-05-24 19:32:28,925 | INFO     | collected zombie processes
[2025-05-24 21:43:47] 2025-05-24 19:32:28,925 | INFO     | will attempt to kill all subprocesses of pid=5830
[2025-05-24 21:43:47] 2025-05-24 19:32:29,045 | INFO     | process IDs to be killed: [5830] (in reverse order)
[2025-05-24 21:43:47] 2025-05-24 19:32:30,118 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 21:43:47] 2025-05-24 19:32:30,119 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 21:43:47] 2025-05-24 19:32:30,122 | INFO     | did not find any defunct processes belonging to 5830
[2025-05-24 21:43:47] 2025-05-24 19:32:30,124 | INFO     | did not find any defunct processes belonging to 5830
[2025-05-24 21:43:47] 2025-05-24 19:32:30,125 | INFO     | ready for new job
[2025-05-24 21:43:47] 2025-05-24 19:32:30,125 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 21:43:47] 2025-05-24 19:32:30,127 | INFO     | **************************************
[2025-05-24 21:43:47] 2025-05-24 19:32:30,127 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 21:43:47] 2025-05-24 19:32:30,127 | INFO     | **************************************
[2025-05-24 21:43:47] 2025-05-24 19:32:30,127 | INFO     | 
[2025-05-24 21:43:47] 2025-05-24 19:32:30,127 | INFO     | pilot is running in a VM
[2025-05-24 21:43:47] 2025-05-24 19:32:30,128 | INFO     | architecture information:
[2025-05-24 21:43:47] 2025-05-24 19:32:30,142 | INFO     | executing command: cat /etc/os-release
[2025-05-24 21:43:47] 2025-05-24 19:32:30,307 | INFO     | cat /etc/os-release:
[2025-05-24 21:43:47] NAME="CentOS Linux"
[2025-05-24 21:43:47] VERSION="7 (Core)"
[2025-05-24 21:43:47] ID="centos"
[2025-05-24 21:43:47] ID_LIKE="rhel fedora"
[2025-05-24 21:43:47] VERSION_ID="7"
[2025-05-24 21:43:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 21:43:47] ANSI_COLOR="0;31"
[2025-05-24 21:43:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 21:43:47] HOME_URL="https://www.centos.org/"
[2025-05-24 21:43:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 21:43:47] 
[2025-05-24 21:43:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 21:43:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 21:43:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 21:43:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 21:43:47] 
[2025-05-24 21:43:47] 2025-05-24 19:32:30,308 | INFO     | **************************************
[2025-05-24 21:43:47] 2025-05-24 19:32:30,812 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-05-24 21:43:47] 2025-05-24 19:32:31,046 | INFO     | sufficient remaining disk space (495826501632 B)
[2025-05-24 21:43:47] 2025-05-24 19:32:31,047 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 21:43:47] 2025-05-24 19:32:31,047 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 21:43:47] 2025-05-24 19:32:31,047 | INFO     | update_server=False
[2025-05-24 21:43:47] 2025-05-24 19:32:31,047 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 21:43:47] 2025-05-24 19:32:31,048 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 21:43:47] 2025-05-24 19:32:31,048 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 21:43:47] 2025-05-24 19:32:31,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 21:43:47] 2025-05-24 19:32:31,049 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 21:43:47] 2025-05-24 19:32:31,342 | INFO     | all job control threads have been joined
[2025-05-24 21:43:47] 2025-05-24 19:32:31,583 | INFO     | all data control threads have been joined
[2025-05-24 21:43:47] 2025-05-24 19:32:31,772 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 21:43:47] 2025-05-24 19:32:31,772 | INFO     | aborting loop
[2025-05-24 21:43:47] 2025-05-24 19:32:31,801 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 21:43:47] 2025-05-24 19:32:31,849 | INFO     | all payload control threads have been joined
[2025-05-24 21:43:47] 2025-05-24 19:32:32,053 | INFO     | [job] retrieve thread has finished
[2025-05-24 21:43:47] 2025-05-24 19:32:32,338 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 21:43:47] 2025-05-24 19:32:32,347 | INFO     | [job] control thread has finished
[2025-05-24 21:43:47] 2025-05-24 19:32:32,588 | INFO     | [data] control thread has finished
[2025-05-24 21:43:47] 2025-05-24 19:32:32,602 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 21:43:47] 2025-05-24 19:32:32,723 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 21:43:47] 2025-05-24 19:32:32,778 | INFO     | [job] job monitor thread has finished
[2025-05-24 21:43:47] 2025-05-24 19:32:32,850 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 21:43:47] 2025-05-24 19:32:32,854 | INFO     | [payload] control thread has finished
[2025-05-24 21:43:47] 2025-05-24 19:32:32,872 | INFO     | [job] validate thread has finished
[2025-05-24 21:43:47] 2025-05-24 19:32:33,179 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 21:43:47] 2025-05-24 19:32:33,240 | INFO     | [payload] failed_post thread has finished
[2025-05-24 21:43:47] 2025-05-24 19:32:33,344 | INFO     | [job] queue monitor thread has finished
[2025-05-24 21:43:47] 2025-05-24 19:32:33,487 | INFO     | [data] copytool_in thread has finished
[2025-05-24 21:43:47] 2025-05-24 19:32:33,521 | INFO     | [payload] validate_post thread has finished
[2025-05-24 21:43:47] 2025-05-24 19:32:33,808 | INFO     | [data] copytool_out thread has finished
[2025-05-24 21:43:47] 2025-05-24 19:32:34,389 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 21:43:47] 2025-05-24 19:32:38,398 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 21:43:47] 2025-05-24 19:32:39,383 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140138390058816)>', '<ExcThread(monitor, started 140138088732416)>']
[2025-05-24 21:43:47] 2025-05-24 19:32:40,101 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 21:43:47] 2025-05-24 19:32:40,101 | INFO     | [monitor] control thread has ended
[2025-05-24 21:43:47] 2025-05-24 19:32:44,409 | INFO     | all workflow threads have been joined
[2025-05-24 21:43:47] 2025-05-24 19:32:44,409 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 21:43:47] 2025-05-24 19:32:44,409 | INFO     | traces error code: 0
[2025-05-24 21:43:47] 2025-05-24 19:32:44,410 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 21:43:47] 2025-05-24 19:32:44,650 [wrapper] ==== pilot stdout END ====
[2025-05-24 21:43:47] 2025-05-24 19:32:44,717 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 21:43:47] 2025-05-24 19:32:44,746 [wrapper] pilotpid: 31592
[2025-05-24 21:43:47] 2025-05-24 19:32:44,777 [wrapper] Pilot exit status: 0
[2025-05-24 21:43:47] 2025-05-24 19:32:45,019 [wrapper] pandaids: 6665273285
[2025-05-24 21:43:47] 2025-05-24 19:32:45,848 [wrapper] cleanup supervisor_pilot  6604 31593
[2025-05-24 21:43:47] 2025-05-24 19:32:45,877 [wrapper] Test setup, not cleaning
[2025-05-24 21:43:47] 2025-05-24 19:32:45,917 [wrapper] apfmon messages muted
[2025-05-24 21:43:47] 2025-05-24 19:32:46,008 [wrapper] ==== wrapper stdout END ====
[2025-05-24 21:43:47] 2025-05-24 19:32:46,105 [wrapper] ==== wrapper stderr END ====
[2025-05-24 21:43:47]  *** Error codes and diagnostics ***
[2025-05-24 21:43:47]     "exeErrorCode": 0,
[2025-05-24 21:43:47]     "exeErrorDiag": "",
[2025-05-24 21:43:47]     "pilotErrorCode": 0,
[2025-05-24 21:43:47]     "pilotErrorDiag": "",
[2025-05-24 21:43:47]  *** Listing of results directory ***
[2025-05-24 21:43:47] total 422900
[2025-05-24 21:43:47] -rw-r--r--. 1 boinc boinc    495897 May 24 07:59 pilot3.tar.gz
[2025-05-24 21:43:47] -rw-r--r--. 1 boinc boinc      5111 May 24 08:13 queuedata.json
[2025-05-24 21:43:47] -rwx------. 1 boinc boinc     37140 May 24 08:13 runpilot2-wrapper.sh
[2025-05-24 21:43:47] -rw-r--r--. 1 boinc boinc       100 May 24 16:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 21:43:47] -rwxr-xr-x. 1 boinc boinc      7986 May 24 16:05 run_atlas
[2025-05-24 21:43:47] -rw-r--r--. 1 boinc boinc       105 May 24 16:05 job.xml
[2025-05-24 21:43:47] -rw-r--r--. 1 boinc boinc      6372 May 24 16:05 init_data.xml
[2025-05-24 21:43:47] -rw-r--r--. 2 boinc boinc 227341324 May 24 16:05 EVNT.44871834._000293.pool.root.1
[2025-05-24 21:43:47] -rw-r--r--. 2 boinc boinc     15093 May 24 16:05 start_atlas.sh
[2025-05-24 21:43:47] drwxrwx--x. 2 boinc boinc        68 May 24 16:05 shared
[2025-05-24 21:43:47] -rw-r--r--. 2 boinc boinc    508882 May 24 16:05 input.tar.gz
[2025-05-24 21:43:47] -rw-r--r--. 1 boinc boinc         0 May 24 16:05 boinc_lockfile
[2025-05-24 21:43:47] -rw-r--r--. 1 boinc boinc      2556 May 24 16:05 pandaJob.out
[2025-05-24 21:43:47] -rw-------. 1 boinc boinc    988556 May 24 16:08 agis_schedconf.cvmfs.json
[2025-05-24 21:43:47] drwx------. 4 boinc boinc      4096 May 24 16:08 pilot3
[2025-05-24 21:43:47] -rw-------. 1 boinc boinc 197725625 May 24 21:29 HITS.44871837._007305.pool.root.1
[2025-05-24 21:43:47] -rw-r--r--. 1 boinc boinc       530 May 24 21:29 boinc_task_state.xml
[2025-05-24 21:43:47] -rw-------. 1 boinc boinc      1017 May 24 21:30 memory_monitor_summary.json
[2025-05-24 21:43:47] -rw-------. 1 boinc boinc   1596740 May 24 21:30 agis_ddmendpoints.agis.ALL.json
[2025-05-24 21:43:47] -rw-------. 1 boinc boinc    420766 May 24 21:30 log.44871837._007305.job.log.tgz.1
[2025-05-24 21:43:47] -rw-------. 1 boinc boinc        95 May 24 21:32 pilot_heartbeat.json
[2025-05-24 21:43:47] -rw-------. 1 boinc boinc      7689 May 24 21:32 heartbeat.json
[2025-05-24 21:43:47] -rw-------. 1 boinc boinc      4540 May 24 21:32 pilotlog.txt
[2025-05-24 21:43:47] -rw-------. 1 boinc boinc   1659948 May 24 21:32 log.44871837._007305.job.log.1
[2025-05-24 21:43:47] -rw-------. 1 boinc boinc       357 May 24 21:32 output.list
[2025-05-24 21:43:47] -rw-r--r--. 1 boinc boinc       620 May 24 21:32 runtime_log
[2025-05-24 21:43:47] -rw-------. 1 boinc boinc   2099200 May 24 21:32 result.tar.gz
[2025-05-24 21:43:47] -rw-------. 1 boinc boinc       657 May 24 21:32 S0MNDmhJxc7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7tPKDmzG9Jln.diag
[2025-05-24 21:43:47] -rw-r--r--. 1 boinc boinc      8673 May 24 21:32 runtime_log.err
[2025-05-24 21:43:47] -rw-r--r--. 1 boinc boinc      8192 May 24 21:43 boinc_mmap_file
[2025-05-24 21:43:47] -rw-r--r--. 1 boinc boinc        28 May 24 21:43 wrapper_checkpoint.txt
[2025-05-24 21:43:47] -rw-r--r--. 1 boinc boinc     20506 May 24 21:43 stderr.txt
[2025-05-24 21:43:47] HITS file was successfully produced:
[2025-05-24 21:43:47] -rw-------. 1 boinc boinc 197725625 May 24 21:29 shared/HITS.pool.root.1
[2025-05-24 21:43:47]  *** Contents of shared directory: ***
[2025-05-24 21:43:47] total 417676
[2025-05-24 21:43:47] -rw-r--r--. 2 boinc boinc 227341324 May 24 16:05 ATLAS.root_0
[2025-05-24 21:43:47] -rw-r--r--. 2 boinc boinc     15093 May 24 16:05 start_atlas.sh
[2025-05-24 21:43:47] -rw-r--r--. 2 boinc boinc    508882 May 24 16:05 input.tar.gz
[2025-05-24 21:43:47] -rw-------. 1 boinc boinc 197725625 May 24 21:29 HITS.pool.root.1
[2025-05-24 21:43:47] -rw-------. 1 boinc boinc   2099200 May 24 21:32 result.tar.gz
21:43:49 (20974): run_atlas exited; CPU time 73337.695043
21:43:49 (20974): called boinc_finish(0)

</stderr_txt>
]]>

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