Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-24 10:08:13 (31644): Detected: vboxwrapper 26206
2025-05-24 10:08:13 (31644): Detected: BOINC client v8.0.2
2025-05-24 10:08:14 (31644): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-05-24 10:08:14 (31644): Successfully copied 'init_data.xml' to the shared directory.
2025-05-24 10:08:14 (31644): Create VM. (boinc_213ea55e86f96ad5, slot#13)
2025-05-24 10:08:15 (31644): Setting Memory Size for VM. (4300MB)
2025-05-24 10:08:15 (31644): Setting CPU Count for VM. (3)
2025-05-24 10:08:15 (31644): Setting Chipset Options for VM.
2025-05-24 10:08:16 (31644): Setting Graphics Controller Options for VM.
2025-05-24 10:08:16 (31644): Setting Boot Options for VM.
2025-05-24 10:08:16 (31644): Setting Network Configuration for NAT.
2025-05-24 10:08:16 (31644): Enabling VM Network Access.
2025-05-24 10:08:17 (31644): Disabling USB Support for VM.
2025-05-24 10:08:17 (31644): Disabling COM Port Support for VM.
2025-05-24 10:08:17 (31644): Disabling LPT Port Support for VM.
2025-05-24 10:08:18 (31644): Disabling Audio Support for VM.
2025-05-24 10:08:18 (31644): Disabling Clipboard Support for VM.
2025-05-24 10:08:18 (31644): Disabling Drag and Drop Support for VM.
2025-05-24 10:08:18 (31644): Adding storage controller(s) to VM.
2025-05-24 10:08:19 (31644): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-24 10:08:19 (31644): Adding VirtualBox Guest Additions to VM.
2025-05-24 10:08:19 (31644): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-24 10:08:20 (31644): forwarding host port 65035 to guest port 80
2025-05-24 10:08:20 (31644): Enabling remote desktop for VM.
2025-05-24 10:08:20 (31644): Required extension pack not installed, remote desktop not enabled.
2025-05-24 10:08:20 (31644): Enabling shared directory for VM.
2025-05-24 10:08:21 (31644): Starting VM using VBoxManage interface. (boinc_213ea55e86f96ad5, slot#13)
2025-05-24 10:08:25 (31644): Successfully started VM. (PID = '30964')
2025-05-24 10:08:25 (31644): Reporting VM Process ID to BOINC.
2025-05-24 10:08:25 (31644): Guest Log: BIOS: VirtualBox 7.1.8
2025-05-24 10:08:25 (31644): Guest Log: CPUID EDX: 0x178bfbff
2025-05-24 10:08:25 (31644): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-24 10:08:25 (31644): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-24 10:08:25 (31644): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-24 10:08:25 (31644): Detected: Web Application Enabled (http://localhost:65035)
2025-05-24 10:08:25 (31644): Preference change detected
2025-05-24 10:08:25 (31644): Setting CPU throttle for VM. (90%)
2025-05-24 10:08:26 (31644): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-24 10:08:27 (31644): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-24 10:08:27 (31644): Guest Log: BIOS: Booting from Hard Disk...
2025-05-24 10:08:29 (31644): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-24 10:08:29 (31644): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-24 10:08:29 (31644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-24 10:08:37 (31644): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-24 10:08:37 (31644): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-24 10:08:41 (31644): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-24 10:08:41 (31644): Guest Log: 00:00:00.000077 main     Log opened 2025-05-24T10:08:39.576429000Z
2025-05-24 10:08:41 (31644): Guest Log: 00:00:00.000163 main     OS Product: Linux
2025-05-24 10:08:41 (31644): Guest Log: 00:00:00.000180 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-24 10:08:41 (31644): Guest Log: 00:00:00.000195 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-24 10:08:41 (31644): Guest Log: 00:00:00.000211 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-24 10:08:41 (31644): Guest Log: 00:00:00.000211 main     Process ID: 1293
2025-05-24 10:08:41 (31644): Guest Log: 00:00:00.000211 main     Package type: LINUX_64BITS_GENERIC
2025-05-24 10:08:41 (31644): Guest Log: 00:00:00.000737 main     5.2.32 r132073 started. Verbose level = 0
2025-05-24 10:08:41 (31644): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-24 10:08:41 (31644): Guest Log: [INFO] Mounting shared directory
2025-05-24 10:08:41 (31644): Guest Log: [INFO] Checking for init_data.xml
2025-05-24 10:08:47 (31644): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-24 10:08:47 (31644): Guest Log: [INFO] Detected branch: prod
2025-05-24 10:08:47 (31644): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-24 10:08:47 (31644): Guest Log: Copying input files
2025-05-24 10:08:48 (31644): Guest Log: Copied input files into RunAtlas.
2025-05-24 10:08:48 (31644): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-24 10:08:48 (31644): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-24 10:08:48 (31644): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-24 10:08:48 (31644): Guest Log: Further information can be found at the LHC@home message board.
2025-05-24 10:08:51 (31644): Guest Log: 00:00:10.002882 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 040 843 000ns (GuestNow=1 748 074 131 537 174 000 ns GuestLast=1 748 081 319 578 017 000 ns fSetTimeLastLoop=true )
2025-05-24 10:08:56 (31644): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-24 10:08:56 (31644): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-24 10:08:56 (31644): Guest Log: 2.6.3.0 1568 0 30168 146359 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-05-24 10:08:57 (31644): Guest Log: copied the webapp to /var/www
2025-05-24 10:08:57 (31644): Guest Log: ATHENA_PROC_NUMBER=3
2025-05-24 10:08:57 (31644): Guest Log: ATHENA_CORE_NUMBER=3
2025-05-24 10:08:58 (31644): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-24 10:08:58 (31644): Guest Log:  *** Starting ATLAS job. (PandaID=6665270912 taskID=44871837) ***
2025-05-24 11:48:28 (31644): Status Report: Elapsed Time: '6000.000000'
2025-05-24 11:48:28 (31644): Status Report: CPU Time: '5191.156250'
2025-05-24 12:51:23 (31644): Preference change detected
2025-05-24 12:51:23 (31644): Setting CPU throttle for VM. (100%)
2025-05-24 12:51:24 (31644): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-24 13:28:31 (31644): Status Report: Elapsed Time: '12000.000000'
2025-05-24 13:28:31 (31644): Status Report: CPU Time: '21993.875000'
2025-05-24 14:44:57 (31644): Guest Log:  *** Job finished ***
2025-05-24 14:44:57 (31644): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-24 14:44:57 (31644): Guest Log: 2025-05-24 12:44:58,148 | INFO     | [data] copytool_out thread has finished
2025-05-24 14:44:57 (31644): Guest Log: 2025-05-24 12:44:58,156 | INFO     | [payload] control thread has finished
2025-05-24 14:44:57 (31644): Guest Log: 2025-05-24 12:45:01,099 | INFO     | [data] queue_monitor thread has finished
2025-05-24 14:44:57 (31644): Guest Log: 2025-05-24 12:45:01,761 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139920153970496)>', '<ExcThread(monitor, started 139919859099392)>']
2025-05-24 14:44:57 (31644): Guest Log: 2025-05-24 12:45:02,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-24 14:44:57 (31644): Guest Log: 2025-05-24 12:45:02,001 | INFO     | [monitor] control thread has ended
2025-05-24 14:44:57 (31644): Guest Log: 2025-05-24 12:45:06,773 | INFO     | all workflow threads have been joined
2025-05-24 14:44:57 (31644): Guest Log: 2025-05-24 12:45:06,773 | INFO     | end of generic workflow (traces error code: 0)
2025-05-24 14:44:57 (31644): Guest Log: 2025-05-24 12:45:06,773 | INFO     | traces error code: 0
2025-05-24 14:44:57 (31644): Guest Log: 2025-05-24 12:45:06,773 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-24 14:44:57 (31644): Guest Log: 2025-05-24 12:45:06,839 [wrapper] ==== pilot stdout END ====
2025-05-24 14:44:57 (31644): Guest Log: 2025-05-24 12:45:06,842 [wrapper] ==== wrapper stdout RESUME ====
2025-05-24 14:44:57 (31644): Guest Log: 2025-05-24 12:45:06,845 [wrapper] pilotpid: 6112
2025-05-24 14:44:57 (31644): Guest Log: 2025-05-24 12:45:06,848 [wrapper] Pilot exit status: 0
2025-05-24 14:44:57 (31644): Guest Log: 2025-05-24 12:45:07,667 [wrapper] pandaids: 6665270912
2025-05-24 14:44:57 (31644): Guest Log: 2025-05-24 12:45:07,686 [wrapper] cleanup supervisor_pilot 15365 6113
2025-05-24 14:44:57 (31644): Guest Log: 2025-05-24 12:45:07,689 [wrapper] Test setup, not cleaning
2025-05-24 14:44:57 (31644): Guest Log: 2025-05-24 12:45:07,692 [wrapper] apfmon messages muted
2025-05-24 14:44:57 (31644): Guest Log: 2025-05-24 12:45:07,694 [wrapper] ==== wrapper stdout END ====
2025-05-24 14:44:57 (31644): Guest Log: 2025-05-24 12:45:07,696 [wrapper] ==== wrapper stderr END ====
2025-05-24 14:44:57 (31644): Guest Log:  *** Error codes and diagnostics ***
2025-05-24 14:44:57 (31644): Guest Log:     "exeErrorCode": 0,
2025-05-24 14:44:57 (31644): Guest Log:     "exeErrorDiag": "",
2025-05-24 14:44:57 (31644): Guest Log:     "pilotErrorCode": 0,
2025-05-24 14:44:57 (31644): Guest Log:     "pilotErrorDiag": "",
2025-05-24 14:44:57 (31644): Guest Log:  *** Listing of results directory ***
2025-05-24 14:44:57 (31644): Guest Log: total 200336
2025-05-24 14:44:57 (31644): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 24 05:59 pilot3.tar.gz
2025-05-24 14:44:57 (31644): Guest Log: -rwx------. 1 atlas atlas     37140 May 24 06:05 runpilot2-wrapper.sh
2025-05-24 14:44:57 (31644): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 24 06:06 queuedata.json
2025-05-24 14:44:57 (31644): Guest Log: -rwxr-xr-x. 1 atlas atlas      9091 May 24 08:08 init_data.xml
2025-05-24 14:44:57 (31644): Guest Log: -rwxr-xr-x. 1 atlas atlas    508873 May 24 08:08 input.tar.gz
2025-05-24 14:44:57 (31644): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 24 08:08 start_atlas.sh
2025-05-24 14:44:57 (31644): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 24 08:08 EVNT.44871834._000278.pool.root.1 -> /data/./ATLAS.root_0
2025-05-24 14:44:57 (31644): Guest Log: -rw-r--r--. 1 atlas atlas      2557 May 24 08:08 pandaJob.out
2025-05-24 14:44:57 (31644): Guest Log: -rw-------. 1 atlas atlas    988612 May 24 08:29 agis_schedconf.cvmfs.json
2025-05-24 14:44:57 (31644): Guest Log: drwx------. 4 atlas atlas      4096 May 24 08:30 pilot3
2025-05-24 14:44:57 (31644): Guest Log: -rw-------. 1 atlas atlas 198261068 May 24 12:42 HITS.44871837._006933.pool.root.1
2025-05-24 14:44:57 (31644): Guest Log: -rw-------. 1 atlas atlas      1027 May 24 12:42 memory_monitor_summary.json
2025-05-24 14:44:57 (31644): Guest Log: -rw-------. 1 atlas atlas   1596740 May 24 12:43 agis_ddmendpoints.agis.ALL.json
2025-05-24 14:44:57 (31644): Guest Log: -rw-------. 1 atlas atlas    305352 May 24 12:43 log.44871837._006933.job.log.tgz.1
2025-05-24 14:44:57 (31644): Guest Log: -rw-------. 1 atlas atlas        96 May 24 12:44 pilot_heartbeat.json
2025-05-24 14:44:57 (31644): Guest Log: -rw-------. 1 atlas atlas      7695 May 24 12:44 heartbeat.json
2025-05-24 14:44:57 (31644): Guest Log: -rw-------. 1 atlas atlas      4536 May 24 12:45 pilotlog.txt
2025-05-24 14:44:57 (31644): Guest Log: -rw-------. 1 atlas atlas   1254772 May 24 12:45 log.44871837._006933.job.log.1
2025-05-24 14:44:57 (31644): Guest Log: -rw-------. 1 atlas atlas       357 May 24 12:45 output.list
2025-05-24 14:44:57 (31644): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 24 12:45 runtime_log
2025-05-24 14:44:57 (31644): Guest Log: -rw-------. 1 atlas atlas   1576960 May 24 12:45 result.tar.gz
2025-05-24 14:44:57 (31644): Guest Log: -rw-------. 1 atlas atlas       648 May 24 12:45 sobLDmeBxc7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9oPKDmL8iDUn.diag
2025-05-24 14:44:57 (31644): Guest Log: -rw-r--r--. 1 atlas atlas      8556 May 24 12:45 runtime_log.err
2025-05-24 14:44:57 (31644): Guest Log: Looking for outputfile HITS.44871837._006933.pool.root.1
2025-05-24 14:44:57 (31644): Guest Log: HITS file was successfully produced
2025-05-24 14:44:57 (31644): Guest Log: -rw-------. 1 atlas atlas 198261068 May 24 12:42 /home/atlas/RunAtlas/HITS.44871837._006933.pool.root.1
2025-05-24 14:44:58 (31644): Guest Log: Successfully finished the ATLAS job!
2025-05-24 14:44:58 (31644): Guest Log: Copying the results back to the shared directory!
2025-05-24 14:44:58 (31644): Guest Log:  *** Contents of shared directory: ***
2025-05-24 14:44:58 (31644): Guest Log: total 414652
2025-05-24 14:44:58 (31644): Guest Log: -rwxrwxrwx. 1 root root 224221698 May 24 08:08 ATLAS.root_0
2025-05-24 14:44:58 (31644): Guest Log: -rwxrwxrwx. 1 root root 198261068 May 24 12:44 HITS.pool.root.1
2025-05-24 14:44:58 (31644): Guest Log: -rwxrwxrwx. 1 root root      9091 May 24 08:08 init_data.xml
2025-05-24 14:44:58 (31644): Guest Log: -rwxrwxrwx. 1 root root    508873 May 24 08:07 input.tar.gz
2025-05-24 14:44:58 (31644): Guest Log: -rwxrwxrwx. 1 root root   1576960 May 24 12:44 result.tar.gz
2025-05-24 14:44:58 (31644): Guest Log: -rwxrwxrwx. 1 root root     15093 May 24 08:07 start_atlas.sh
2025-05-24 14:44:58 (31644): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-24 14:44:58 (31644): VM Completion File Detected.
2025-05-24 14:44:58 (31644): Powering off VM.
2025-05-24 14:44:58 (31644): Successfully stopped VM.
2025-05-24 14:44:58 (31644): Deregistering VM. (boinc_213ea55e86f96ad5, slot#13)
2025-05-24 14:44:58 (31644): Removing network bandwidth throttle group from VM.
2025-05-24 14:44:58 (31644): Removing VM from VirtualBox.
14:45:04 (31644): called boinc_finish(0)

</stderr_txt>
]]>

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