Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
10:01:13 (210192): wrapper (7.7.26015): starting
10:01:13 (210192): wrapper: running run_atlas (--nthreads 12)
[2025-05-24 10:01:13] Arguments: --nthreads 12
[2025-05-24 10:01:13] Threads: 12
[2025-05-24 10:01:13] Checking for CVMFS
[2025-05-24 10:01:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 10:01:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 10:01:14] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 10:01:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 10:01:14] 2.12.7.0 53508 179 48024 146362 0 187 2388795 4096001 2689 130560 0 425849 99.985 143266 4841 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-05-24 10:01:14] CVMFS is ok
[2025-05-24 10:01:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 10:01:14] Checking for apptainer binary...
[2025-05-24 10:01:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 10:01:14] Running /usr/bin/apptainer --version
[2025-05-24 10:01:14] apptainer version 1.3.4
[2025-05-24 10:01:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 10:01:14] t610hp
[2025-05-24 10:01:14] apptainer works
[2025-05-24 10:01:14] Set ATHENA_PROC_NUMBER=12
[2025-05-24 10:01:14] Set ATHENA_CORE_NUMBER=12
[2025-05-24 10:01:14] Starting ATLAS job with PandaID=6665273307
[2025-05-24 10:01:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 12:38:48]  *** The last 200 lines of the pilot log: ***
[2025-05-24 12:38:48] 2025-05-24 12:38:30,094 | INFO     | sum of deviations: 5494763947.499999
[2025-05-24 12:38:48] 2025-05-24 12:38:30,094 | INFO     | mean x: 1748085880.5
[2025-05-24 12:38:48] 2025-05-24 12:38:30,094 | INFO     | mean y: 2679586.0069444445
[2025-05-24 12:38:48] 2025-05-24 12:38:30,094 | INFO     | -- intersect: -10371812632.480864
[2025-05-24 12:38:48] 2025-05-24 12:38:30,095 | INFO     | intersect: -10371812632.480864
[2025-05-24 12:38:48] 2025-05-24 12:38:30,095 | INFO     | chi2: 0.0020191974608656923
[2025-05-24 12:38:49] 2025-05-24 12:38:30,095 | INFO     | current chi2=0.0020191974608656923 (change=98.0094272771654 %)
[2025-05-24 12:38:49] 2025-05-24 12:38:30,095 | INFO     | sum of square deviations: 832722590.0
[2025-05-24 12:38:49] 2025-05-24 12:38:30,096 | INFO     | sum of deviations: 4462861321.0
[2025-05-24 12:38:49] 2025-05-24 12:38:30,096 | INFO     | mean x: 1748086033.0
[2025-05-24 12:38:49] 2025-05-24 12:38:30,096 | INFO     | mean y: 2681290.5827338127
[2025-05-24 12:38:49] 2025-05-24 12:38:30,097 | INFO     | -- intersect: -9365943550.561577
[2025-05-24 12:38:49] 2025-05-24 12:38:30,097 | INFO     | intersect: -9365943550.561577
[2025-05-24 12:38:49] 2025-05-24 12:38:30,097 | INFO     | chi2: 0.0007968713917385884
[2025-05-24 12:38:49] 2025-05-24 12:38:30,097 | INFO     | current chi2=0.0007968713917385884 (change=60.53524198683644 %)
[2025-05-24 12:38:49] 2025-05-24 12:38:30,097 | INFO     | sum of square deviations: 746051197.5
[2025-05-24 12:38:49] 2025-05-24 12:38:30,098 | INFO     | sum of deviations: 3580875161.5
[2025-05-24 12:38:49] 2025-05-24 12:38:30,098 | INFO     | mean x: 1748086185.5
[2025-05-24 12:38:49] 2025-05-24 12:38:30,099 | INFO     | mean y: 2682841.350746269
[2025-05-24 12:38:49] 2025-05-24 12:38:30,099 | INFO     | -- intersect: -8387731144.705795
[2025-05-24 12:38:49] 2025-05-24 12:38:30,099 | INFO     | intersect: -8387731144.705795
[2025-05-24 12:38:49] 2025-05-24 12:38:30,099 | INFO     | chi2: 0.0004789411988276937
[2025-05-24 12:38:49] 2025-05-24 12:38:30,099 | INFO     | current chi2=0.0004789411988276937 (change=39.897302903200575 %)
[2025-05-24 12:38:49] 2025-05-24 12:38:30,100 | INFO     | sum of square deviations: 665612480.0
[2025-05-24 12:38:49] 2025-05-24 12:38:30,100 | INFO     | sum of deviations: 2864018441.9999995
[2025-05-24 12:38:49] 2025-05-24 12:38:30,100 | INFO     | mean x: 1748086338.0
[2025-05-24 12:38:49] 2025-05-24 12:38:30,101 | INFO     | mean y: 2684200.07751938
[2025-05-24 12:38:49] 2025-05-24 12:38:30,101 | INFO     | -- intersect: -7519037012.602033
[2025-05-24 12:38:49] 2025-05-24 12:38:30,101 | INFO     | intersect: -7519037012.602033
[2025-05-24 12:38:49] 2025-05-24 12:38:30,101 | INFO     | chi2: 0.00026454147137472406
[2025-05-24 12:38:49] 2025-05-24 12:38:30,101 | INFO     | current chi2=0.00026454147137472406 (change=44.76535490739922 %)
[2025-05-24 12:38:49] 2025-05-24 12:38:30,102 | INFO     | sum of square deviations: 591173875.0
[2025-05-24 12:38:49] 2025-05-24 12:38:30,102 | INFO     | sum of deviations: 2332714084.5000005
[2025-05-24 12:38:49] 2025-05-24 12:38:30,103 | INFO     | mean x: 1748086490.5
[2025-05-24 12:38:49] 2025-05-24 12:38:30,103 | INFO     | mean y: 2685285.3467741935
[2025-05-24 12:38:49] 2025-05-24 12:38:30,103 | INFO     | -- intersect: -6895092423.98371
[2025-05-24 12:38:49] 2025-05-24 12:38:30,103 | INFO     | intersect: -6895092423.98371
[2025-05-24 12:38:49] 2025-05-24 12:38:30,103 | INFO     | chi2: 0.00015908434237964125
[2025-05-24 12:38:49] 2025-05-24 12:38:30,103 | INFO     | current chi2=0.00015908434237964125 (change=39.864119771868346 %)
[2025-05-24 12:38:49] 2025-05-24 12:38:30,104 | INFO     | sum of square deviations: 522502820.0
[2025-05-24 12:38:49] 2025-05-24 12:38:30,104 | INFO     | sum of deviations: 1982073365.9999998
[2025-05-24 12:38:49] 2025-05-24 12:38:30,104 | INFO     | mean x: 1748086643.0
[2025-05-24 12:38:49] 2025-05-24 12:38:30,105 | INFO     | mean y: 2686061.882352941
[2025-05-24 12:38:49] 2025-05-24 12:38:30,105 | INFO     | -- intersect: -6628543175.407984
[2025-05-24 12:38:49] 2025-05-24 12:38:30,105 | INFO     | intersect: -6628543175.407984
[2025-05-24 12:38:49] 2025-05-24 12:38:30,105 | INFO     | chi2: 0.00013981073823867994
[2025-05-24 12:38:49] 2025-05-24 12:38:30,105 | INFO     | current chi2=0.00013981073823867994 (change=12.115336966957123 %)
[2025-05-24 12:38:49] 2025-05-24 12:38:30,105 | INFO     | left removable region: 70
[2025-05-24 12:38:49] 2025-05-24 12:38:30,106 | INFO     | sum of square deviations: 147126479.5
[2025-05-24 12:38:49] 2025-05-24 12:38:30,106 | INFO     | sum of deviations: 614731159.9999999
[2025-05-24 12:38:49] 2025-05-24 12:38:30,106 | INFO     | mean x: 1748087527.5
[2025-05-24 12:38:49] 2025-05-24 12:38:30,106 | INFO     | mean y: 2689793.871794872
[2025-05-24 12:38:49] 2025-05-24 12:38:30,106 | INFO     | -- intersect: -7301256288.530093
[2025-05-24 12:38:49] 2025-05-24 12:38:30,106 | INFO     | intersect: -7301256288.530093
[2025-05-24 12:38:49] 2025-05-24 12:38:30,107 | INFO     | chi2: 9.638235387871107e-05
[2025-05-24 12:38:49] 2025-05-24 12:38:30,107 | INFO     | -- intersect: -7301256288.530093
[2025-05-24 12:38:49] 2025-05-24 12:38:30,107 | INFO     | current memory leak: 4.18 B/s (using 78 data points, chi2=0.00)
[2025-05-24 12:38:49] 2025-05-24 12:38:30,108 | INFO     | ..............................
[2025-05-24 12:38:49] 2025-05-24 12:38:30,108 | INFO     | . Timing measurements:
[2025-05-24 12:38:49] 2025-05-24 12:38:30,108 | INFO     | . get job = 0 s
[2025-05-24 12:38:49] 2025-05-24 12:38:30,108 | INFO     | . initial setup = 1 s
[2025-05-24 12:38:49] 2025-05-24 12:38:30,108 | INFO     | . payload setup = 5 s
[2025-05-24 12:38:49] 2025-05-24 12:38:30,108 | INFO     | . stage-in = 0 s
[2025-05-24 12:38:49] 2025-05-24 12:38:30,108 | INFO     | . payload execution = 9397 s
[2025-05-24 12:38:49] 2025-05-24 12:38:30,108 | INFO     | . stage-out = 0 s
[2025-05-24 12:38:49] 2025-05-24 12:38:30,108 | INFO     | . log creation = 0 s
[2025-05-24 12:38:49] 2025-05-24 12:38:30,109 | INFO     | ..............................
[2025-05-24 12:38:49] 2025-05-24 12:38:30,220 | INFO     | 
[2025-05-24 12:38:49] 2025-05-24 12:38:30,221 | INFO     | job summary report
[2025-05-24 12:38:49] 2025-05-24 12:38:30,221 | INFO     | --------------------------------------------------
[2025-05-24 12:38:49] 2025-05-24 12:38:30,221 | INFO     | PanDA job id: 6665273307
[2025-05-24 12:38:49] 2025-05-24 12:38:30,221 | INFO     | task id: 44871837
[2025-05-24 12:38:49] 2025-05-24 12:38:30,221 | INFO     | errors: (none)
[2025-05-24 12:38:49] 2025-05-24 12:38:30,221 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 12:38:49] 2025-05-24 12:38:30,221 | INFO     | pilot state: finished 
[2025-05-24 12:38:49] 2025-05-24 12:38:30,221 | INFO     | transexitcode: 0
[2025-05-24 12:38:49] 2025-05-24 12:38:30,221 | INFO     | exeerrorcode: 0
[2025-05-24 12:38:49] 2025-05-24 12:38:30,222 | INFO     | exeerrordiag: 
[2025-05-24 12:38:49] 2025-05-24 12:38:30,222 | INFO     | exitcode: 0
[2025-05-24 12:38:49] 2025-05-24 12:38:30,222 | INFO     | exitmsg: OK
[2025-05-24 12:38:49] 2025-05-24 12:38:30,222 | INFO     | cpuconsumptiontime: 71887 s
[2025-05-24 12:38:49] 2025-05-24 12:38:30,222 | INFO     | nevents: 400
[2025-05-24 12:38:49] 2025-05-24 12:38:30,222 | INFO     | neventsw: 0
[2025-05-24 12:38:49] 2025-05-24 12:38:30,222 | INFO     | pid: 220677
[2025-05-24 12:38:49] 2025-05-24 12:38:30,222 | INFO     | pgrp: 220677
[2025-05-24 12:38:49] 2025-05-24 12:38:30,222 | INFO     | corecount: 12
[2025-05-24 12:38:49] 2025-05-24 12:38:30,223 | INFO     | event service: False
[2025-05-24 12:38:49] 2025-05-24 12:38:30,223 | INFO     | sizes: {0: 2393534, 1: 2393733, 4: 2393939, 11: 2393967, 9406: 2422046, 9408: 2431033, 9410: 2431217, 9414: 2431387}
[2025-05-24 12:38:49] 2025-05-24 12:38:30,223 | INFO     | --------------------------------------------------
[2025-05-24 12:38:49] 2025-05-24 12:38:30,223 | INFO     | 
[2025-05-24 12:38:49] 2025-05-24 12:38:30,223 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/5
[2025-05-24 12:38:49] 2025-05-24 12:38:30,241 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 12:38:49] 2025-05-24 12:38:30,242 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 12:38:49] 2025-05-24 12:38:30,242 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 12:38:49] 2025-05-24 12:38:30,242 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 12:38:49] 2025-05-24 12:38:30,242 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 12:38:49] 2025-05-24 12:38:30,242 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 12:38:49] 2025-05-24 12:38:30,242 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 12:38:49] 2025-05-24 12:38:30,242 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 12:38:49] 2025-05-24 12:38:30,243 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 12:38:49] 2025-05-24 12:38:30,243 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 12:38:49] 2025-05-24 12:38:30,243 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 12:38:49] 2025-05-24 12:38:30,243 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 12:38:49] 2025-05-24 12:38:30,243 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 12:38:49] 2025-05-24 12:38:30,243 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 12:38:49] 2025-05-24 12:38:30,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 12:38:49] 2025-05-24 12:38:30,243 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 12:38:49] 2025-05-24 12:38:30,243 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 12:38:49] 2025-05-24 12:38:30,244 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 12:38:49] 2025-05-24 12:38:30,244 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 12:38:49] 2025-05-24 12:38:30,244 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 12:38:49] 2025-05-24 12:38:30,244 | INFO     | job 6665273307 has completed (purged errors)
[2025-05-24 12:38:49] 2025-05-24 12:38:30,244 | INFO     | overall cleanup function is called
[2025-05-24 12:38:49] 2025-05-24 12:38:31,253 | INFO     | --- collectZombieJob: --- 10, [220677]
[2025-05-24 12:38:49] 2025-05-24 12:38:31,253 | INFO     | zombie collector waiting for pid 220677
[2025-05-24 12:38:49] 2025-05-24 12:38:31,253 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 12:38:49] 2025-05-24 12:38:31,253 | INFO     | collected zombie processes
[2025-05-24 12:38:49] 2025-05-24 12:38:31,254 | INFO     | will attempt to kill all subprocesses of pid=220677
[2025-05-24 12:38:49] 2025-05-24 12:38:31,439 | INFO     | process IDs to be killed: [220677] (in reverse order)
[2025-05-24 12:38:49] 2025-05-24 12:38:31,494 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 12:38:49] 2025-05-24 12:38:31,494 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 12:38:49] 2025-05-24 12:38:31,499 | INFO     | did not find any defunct processes belonging to 220677
[2025-05-24 12:38:49] 2025-05-24 12:38:31,503 | INFO     | did not find any defunct processes belonging to 220677
[2025-05-24 12:38:49] 2025-05-24 12:38:31,503 | INFO     | ready for new job
[2025-05-24 12:38:49] 2025-05-24 12:38:31,503 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 12:38:49] 2025-05-24 12:38:31,505 | INFO     | **************************************
[2025-05-24 12:38:49] 2025-05-24 12:38:31,505 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 12:38:49] 2025-05-24 12:38:31,506 | INFO     | **************************************
[2025-05-24 12:38:49] 2025-05-24 12:38:31,506 | INFO     | 
[2025-05-24 12:38:49] 2025-05-24 12:38:31,508 | INFO     | architecture information:
[2025-05-24 12:38:49] 2025-05-24 12:38:31,508 | INFO     | executing command: cat /etc/os-release
[2025-05-24 12:38:49] 2025-05-24 12:38:31,522 | INFO     | cat /etc/os-release:
[2025-05-24 12:38:49] NAME="CentOS Linux"
[2025-05-24 12:38:49] VERSION="7 (Core)"
[2025-05-24 12:38:49] ID="centos"
[2025-05-24 12:38:49] ID_LIKE="rhel fedora"
[2025-05-24 12:38:49] VERSION_ID="7"
[2025-05-24 12:38:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 12:38:49] ANSI_COLOR="0;31"
[2025-05-24 12:38:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 12:38:49] HOME_URL="https://www.centos.org/"
[2025-05-24 12:38:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 12:38:49] 
[2025-05-24 12:38:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 12:38:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 12:38:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 12:38:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 12:38:49] 
[2025-05-24 12:38:49] 2025-05-24 12:38:31,522 | INFO     | **************************************
[2025-05-24 12:38:49] 2025-05-24 12:38:32,025 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/5
[2025-05-24 12:38:49] 2025-05-24 12:38:32,040 | INFO     | sufficient remaining disk space (13250854912 B)
[2025-05-24 12:38:49] 2025-05-24 12:38:32,040 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 12:38:49] 2025-05-24 12:38:32,040 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 12:38:49] 2025-05-24 12:38:32,040 | INFO     | update_server=False
[2025-05-24 12:38:49] 2025-05-24 12:38:32,041 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 12:38:49] 2025-05-24 12:38:32,041 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 12:38:49] 2025-05-24 12:38:32,041 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 12:38:49] 2025-05-24 12:38:32,041 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 12:38:49] 2025-05-24 12:38:32,206 | INFO     | all data control threads have been joined
[2025-05-24 12:38:49] 2025-05-24 12:38:32,649 | INFO     | all payload control threads have been joined
[2025-05-24 12:38:49] 2025-05-24 12:38:32,693 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 12:38:49] 2025-05-24 12:38:32,693 | INFO     | aborting loop
[2025-05-24 12:38:49] 2025-05-24 12:38:32,711 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 12:38:49] 2025-05-24 12:38:32,711 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 12:38:49] 2025-05-24 12:38:32,711 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 12:38:49] 2025-05-24 12:38:33,046 | INFO     | [job] retrieve thread has finished
[2025-05-24 12:38:49] 2025-05-24 12:38:33,047 | INFO     | [job] queue monitor thread has finished
[2025-05-24 12:38:49] 2025-05-24 12:38:33,091 | INFO     | [data] copytool_in thread has finished
[2025-05-24 12:38:49] 2025-05-24 12:38:33,125 | INFO     | [payload] validate_post thread has finished
[2025-05-24 12:38:49] 2025-05-24 12:38:33,210 | INFO     | [data] control thread has finished
[2025-05-24 12:38:49] 2025-05-24 12:38:33,575 | INFO     | [job] validate thread has finished
[2025-05-24 12:38:49] 2025-05-24 12:38:33,655 | INFO     | [payload] control thread has finished
[2025-05-24 12:38:49] 2025-05-24 12:38:33,658 | INFO     | all job control threads have been joined
[2025-05-24 12:38:49] 2025-05-24 12:38:33,699 | INFO     | [job] job monitor thread has finished
[2025-05-24 12:38:49] 2025-05-24 12:38:33,741 | INFO     | [payload] failed_post thread has finished
[2025-05-24 12:38:49] 2025-05-24 12:38:33,908 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 12:38:49] 2025-05-24 12:38:34,046 | INFO     | [data] copytool_out thread has finished
[2025-05-24 12:38:49] 2025-05-24 12:38:34,086 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 12:38:49] 2025-05-24 12:38:34,207 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 12:38:49] 2025-05-24 12:38:34,663 | INFO     | [job] control thread has finished
[2025-05-24 12:38:49] 2025-05-24 12:38:36,046 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 12:38:49] 2025-05-24 12:38:42,091 | INFO     | job.realtimelogging is not enabled
[2025-05-24 12:38:49] 2025-05-24 12:38:43,096 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 12:38:49] 2025-05-24 12:38:43,754 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131983888537408)>', '<ExcThread(monitor, started 131983397086976)>']
[2025-05-24 12:38:49] 2025-05-24 12:38:43,761 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 12:38:49] 2025-05-24 12:38:43,761 | INFO     | [monitor] control thread has ended
[2025-05-24 12:38:49] 2025-05-24 12:38:48,779 | INFO     | all workflow threads have been joined
[2025-05-24 12:38:49] 2025-05-24 12:38:48,779 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 12:38:49] 2025-05-24 12:38:48,780 | INFO     | traces error code: 0
[2025-05-24 12:38:49] 2025-05-24 12:38:48,780 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 12:38:49] 2025-05-24 12:38:48,879 [wrapper] ==== pilot stdout END ====
[2025-05-24 12:38:49] 2025-05-24 12:38:48,882 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 12:38:49] 2025-05-24 12:38:48,884 [wrapper] pilotpid: 213962
[2025-05-24 12:38:49] 2025-05-24 12:38:48,886 [wrapper] Pilot exit status: 0
[2025-05-24 12:38:49] 2025-05-24 12:38:48,896 [wrapper] pandaids: 6665273307
[2025-05-24 12:38:49] 2025-05-24 12:38:48,934 [wrapper] cleanup supervisor_pilot  324053 213963
[2025-05-24 12:38:49] 2025-05-24 12:38:48,937 [wrapper] Test setup, not cleaning
[2025-05-24 12:38:49] 2025-05-24 12:38:48,940 [wrapper] apfmon messages muted
[2025-05-24 12:38:49] 2025-05-24 12:38:48,942 [wrapper] ==== wrapper stdout END ====
[2025-05-24 12:38:49] 2025-05-24 12:38:48,945 [wrapper] ==== wrapper stderr END ====
[2025-05-24 12:38:49]  *** Error codes and diagnostics ***
[2025-05-24 12:38:49]     "exeErrorCode": 0,
[2025-05-24 12:38:49]     "exeErrorDiag": "",
[2025-05-24 12:38:49]     "pilotErrorCode": 0,
[2025-05-24 12:38:49]     "pilotErrorDiag": "",
[2025-05-24 12:38:49]  *** Listing of results directory ***
[2025-05-24 12:38:49] total 426572
[2025-05-24 12:38:49] -rw-r--r-- 1 boinc boinc    495897 Mai 24 05:59 pilot3.tar.gz
[2025-05-24 12:38:49] -rw-r--r-- 1 boinc boinc      5111 Mai 24 06:13 queuedata.json
[2025-05-24 12:38:49] -rwx------ 1 boinc boinc     37140 Mai 24 06:14 runpilot2-wrapper.sh
[2025-05-24 12:38:49] -rw-rw-r-- 1 boinc boinc       100 Mai 24 10:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 12:38:49] -rwxr-xr-x 1 boinc boinc      7986 Mai 24 10:01 run_atlas
[2025-05-24 12:38:49] -rw-rw-r-- 1 boinc boinc       105 Mai 24 10:01 job.xml
[2025-05-24 12:38:49] -rw-r--r-- 2 boinc boinc 225292168 Mai 24 10:01 EVNT.44871834._000294.pool.root.1
[2025-05-24 12:38:49] -rw-r--r-- 2 boinc boinc     15093 Mai 24 10:01 start_atlas.sh
[2025-05-24 12:38:49] drwxrwx--x 2 boinc boinc      4096 Mai 24 10:01 shared
[2025-05-24 12:38:49] -rw-r--r-- 2 boinc boinc    508868 Mai 24 10:01 input.tar.gz
[2025-05-24 12:38:49] -rw-rw-r-- 1 boinc boinc      9385 Mai 24 10:01 init_data.xml
[2025-05-24 12:38:49] -rw-rw-r-- 1 boinc boinc         0 Mai 24 10:01 boinc_lockfile
[2025-05-24 12:38:49] -rw-rw-r-- 1 boinc boinc      2554 Mai 24 10:01 pandaJob.out
[2025-05-24 12:38:49] -rw------- 1 boinc boinc    988596 Mai 24 10:01 agis_schedconf.cvmfs.json
[2025-05-24 12:38:49] -rw------- 1 boinc boinc   1596740 Mai 24 10:01 agis_ddmendpoints.agis.ALL.json
[2025-05-24 12:38:49] drwx------ 4 boinc boinc      4096 Mai 24 10:01 pilot3
[2025-05-24 12:38:49] -rw------- 1 boinc boinc        95 Mai 24 12:37 pilot_heartbeat.json
[2025-05-24 12:38:49] -rw------- 1 boinc boinc 205057837 Mai 24 12:37 HITS.44871837._007327.pool.root.1
[2025-05-24 12:38:49] -rw-rw-r-- 1 boinc boinc       529 Mai 24 12:37 boinc_task_state.xml
[2025-05-24 12:38:49] -rw------- 1 boinc boinc      1032 Mai 24 12:38 memory_monitor_summary.json
[2025-05-24 12:38:49] -rw------- 1 boinc boinc    398574 Mai 24 12:38 log.44871837._007327.job.log.tgz.1
[2025-05-24 12:38:49] -rw------- 1 boinc boinc      7665 Mai 24 12:38 heartbeat.json
[2025-05-24 12:38:49] -rw-rw-r-- 1 boinc boinc      8192 Mai 24 12:38 boinc_mmap_file
[2025-05-24 12:38:49] -rw-rw-r-- 1 boinc boinc        27 Mai 24 12:38 wrapper_checkpoint.txt
[2025-05-24 12:38:49] -rw------- 1 boinc boinc      4448 Mai 24 12:38 pilotlog.txt
[2025-05-24 12:38:49] -rw------- 1 boinc boinc    913469 Mai 24 12:38 log.44871837._007327.job.log.1
[2025-05-24 12:38:49] -rw------- 1 boinc boinc       357 Mai 24 12:38 output.list
[2025-05-24 12:38:49] -rw-rw-r-- 1 boinc boinc       620 Mai 24 12:38 runtime_log
[2025-05-24 12:38:49] -rw------- 1 boinc boinc   1331200 Mai 24 12:38 result.tar.gz
[2025-05-24 12:38:49] -rw------- 1 boinc boinc       650 Mai 24 12:38 amJKDmLKxc7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDuPKDmYR7gRn.diag
[2025-05-24 12:38:49] -rw-rw-r-- 1 boinc boinc      8947 Mai 24 12:38 runtime_log.err
[2025-05-24 12:38:49] -rw-rw-r-- 1 boinc boinc     20507 Mai 24 12:38 stderr.txt
[2025-05-24 12:38:49] HITS file was successfully produced:
[2025-05-24 12:38:49] -rw------- 1 boinc boinc 205057837 Mai 24 12:37 shared/HITS.pool.root.1
[2025-05-24 12:38:49]  *** Contents of shared directory: ***
[2025-05-24 12:38:49] total 422088
[2025-05-24 12:38:49] -rw-r--r-- 2 boinc boinc 225292168 Mai 24 10:01 ATLAS.root_0
[2025-05-24 12:38:49] -rw-r--r-- 2 boinc boinc     15093 Mai 24 10:01 start_atlas.sh
[2025-05-24 12:38:49] -rw-r--r-- 2 boinc boinc    508868 Mai 24 10:01 input.tar.gz
[2025-05-24 12:38:49] -rw------- 1 boinc boinc 205057837 Mai 24 12:37 HITS.pool.root.1
[2025-05-24 12:38:49] -rw------- 1 boinc boinc   1331200 Mai 24 12:38 result.tar.gz
12:38:51 (210192): run_atlas exited; CPU time 71943.949481
12:38:51 (210192): called boinc_finish(0)

</stderr_txt>
]]>

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