Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:43:40 (21569): wrapper (7.7.26015): starting
15:43:40 (21569): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 15:43:40] Arguments: --nthreads 8
[2025-05-24 15:43:40] Threads: 8
[2025-05-24 15:43:40] Checking for CVMFS
[2025-05-24 15:43:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 15:43:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 15:43:41] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 15:43:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 15:43:42] 2.11.2.0 22062 17625 96788 146368 1 60 17194418 25165825 1776 130560 0 10010052 99.730 12123332 1646 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-24 15:43:42] CVMFS is ok
[2025-05-24 15:43:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 15:43:42] Checking for apptainer binary...
[2025-05-24 15:43:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 15:43:42] Running /usr/bin/apptainer --version
[2025-05-24 15:43:42] apptainer version 1.3.2-1.el7
[2025-05-24 15:43:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 15:43:56] cg-vwn481.simple-grid.lan
[2025-05-24 15:43:56] apptainer works
[2025-05-24 15:43:57] Set ATHENA_PROC_NUMBER=8
[2025-05-24 15:43:57] Set ATHENA_CORE_NUMBER=8
[2025-05-24 15:43:57] Starting ATLAS job with PandaID=6665208609
[2025-05-24 15:43:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 20:50:55]  *** The last 200 lines of the pilot log: ***
[2025-05-24 20:50:55] 2025-05-24 18:28:22,882 | INFO     | monitor loop #1226: job 0:6665208609 is in state 'finished'
[2025-05-24 20:50:55] 2025-05-24 18:28:22,882 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 20:50:55] 2025-05-24 18:28:24,276 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-24 20:50:55] 2025-05-24 18:28:24,276 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6665208609/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 20:50:55] 2025-05-24 18:28:24,277 | INFO     | extracted standard info from prmon json
[2025-05-24 20:50:55] 2025-05-24 18:28:24,277 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 20:50:55] 2025-05-24 18:28:24,277 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 20:50:55] 2025-05-24 18:28:24,277 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 20:50:55] 2025-05-24 18:28:24,277 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 20:50:55] 2025-05-24 18:28:24,282 | INFO     | fitting pss+swap vs Time
[2025-05-24 20:50:55] 2025-05-24 18:28:24,283 | INFO     | sum of square deviations: 5968658887.0
[2025-05-24 20:50:55] 2025-05-24 18:28:24,285 | INFO     | sum of deviations: 74562501215.50002
[2025-05-24 20:50:55] 2025-05-24 18:28:24,285 | INFO     | mean x: 1748103040.5
[2025-05-24 20:50:55] 2025-05-24 18:28:24,285 | INFO     | mean y: 2456555.4589552237
[2025-05-24 20:50:55] 2025-05-24 18:28:24,285 | INFO     | -- intersect: -21835436604.425446
[2025-05-24 20:50:55] 2025-05-24 18:28:24,286 | INFO     | intersect: -21835436604.425446
[2025-05-24 20:50:55] 2025-05-24 18:28:24,286 | INFO     | chi2: 4.878715990923392
[2025-05-24 20:50:55] 2025-05-24 18:28:24,286 | INFO     | sum of square deviations: 5640782972.0
[2025-05-24 20:50:55] 2025-05-24 18:28:24,288 | INFO     | sum of deviations: 90716330132.99998
[2025-05-24 20:50:55] 2025-05-24 18:28:24,289 | INFO     | mean x: 1748102888.0
[2025-05-24 20:50:55] 2025-05-24 18:28:24,289 | INFO     | mean y: 2463943.7262357413
[2025-05-24 20:50:55] 2025-05-24 18:28:24,289 | INFO     | -- intersect: -28110916677.622494
[2025-05-24 20:50:55] 2025-05-24 18:28:24,289 | INFO     | intersect: -28110916677.622494
[2025-05-24 20:50:55] 2025-05-24 18:28:24,289 | INFO     | chi2: 4.135293330247783
[2025-05-24 20:50:55] 2025-05-24 18:28:24,289 | INFO     | current chi2=4.135293330247783 (change=15.238080307579082 %)
[2025-05-24 20:50:55] 2025-05-24 18:28:24,289 | INFO     | right removable region: 262
[2025-05-24 20:50:55] 2025-05-24 18:28:24,290 | INFO     | sum of square deviations: 5640782972.0
[2025-05-24 20:50:55] 2025-05-24 18:28:24,292 | INFO     | sum of deviations: -11412314930.0
[2025-05-24 20:50:55] 2025-05-24 18:28:24,292 | INFO     | mean x: 1748103193.0
[2025-05-24 20:50:55] 2025-05-24 18:28:24,292 | INFO     | mean y: 2496481.741444867
[2025-05-24 20:50:55] 2025-05-24 18:28:24,292 | INFO     | -- intersect: 3539222547.5523267
[2025-05-24 20:50:55] 2025-05-24 18:28:24,292 | INFO     | intersect: 3539222547.5523267
[2025-05-24 20:50:55] 2025-05-24 18:28:24,293 | INFO     | chi2: 0.9314153521399167
[2025-05-24 20:50:55] 2025-05-24 18:28:24,293 | INFO     | current chi2=0.9314153521399167 (change=80.9085965677697 %)
[2025-05-24 20:50:55] 2025-05-24 18:28:24,293 | INFO     | sum of square deviations: 5325139844.5
[2025-05-24 20:50:55] 2025-05-24 18:28:24,302 | INFO     | sum of deviations: -19943951494.5
[2025-05-24 20:50:55] 2025-05-24 18:28:24,303 | INFO     | mean x: 1748103345.5
[2025-05-24 20:50:55] 2025-05-24 18:28:24,303 | INFO     | mean y: 2500559.6240310078
[2025-05-24 20:50:55] 2025-05-24 18:28:24,303 | INFO     | -- intersect: 6549575255.894043
[2025-05-24 20:50:55] 2025-05-24 18:28:24,303 | INFO     | intersect: 6549575255.894043
[2025-05-24 20:50:55] 2025-05-24 18:28:24,303 | INFO     | chi2: 0.8556607705522131
[2025-05-24 20:50:55] 2025-05-24 18:28:24,303 | INFO     | current chi2=0.8556607705522131 (change=8.13327603132783 %)
[2025-05-24 20:50:55] 2025-05-24 18:28:24,303 | INFO     | left removable region: 20
[2025-05-24 20:50:55] 2025-05-24 18:28:24,304 | INFO     | sum of square deviations: 4394577280.5
[2025-05-24 20:50:55] 2025-05-24 18:28:24,306 | INFO     | sum of deviations: 9393682952.499998
[2025-05-24 20:50:55] 2025-05-24 18:28:24,306 | INFO     | mean x: 1748103467.5
[2025-05-24 20:50:55] 2025-05-24 18:28:24,306 | INFO     | mean y: 2502679.5578512396
[2025-05-24 20:50:55] 2025-05-24 18:28:24,306 | INFO     | -- intersect: -3734177481.859755
[2025-05-24 20:50:55] 2025-05-24 18:28:24,306 | INFO     | intersect: -3734177481.859755
[2025-05-24 20:50:55] 2025-05-24 18:28:24,306 | INFO     | chi2: 0.002176736265101445
[2025-05-24 20:50:55] 2025-05-24 18:28:24,306 | INFO     | -- intersect: -3734177481.859755
[2025-05-24 20:50:55] 2025-05-24 18:28:24,307 | INFO     | current memory leak: 2.14 B/s (using 242 data points, chi2=0.00)
[2025-05-24 20:50:55] 2025-05-24 18:28:24,307 | INFO     | ..............................
[2025-05-24 20:50:55] 2025-05-24 18:28:24,307 | INFO     | . Timing measurements:
[2025-05-24 20:50:55] 2025-05-24 18:28:24,307 | INFO     | . get job = 0 s
[2025-05-24 20:50:55] 2025-05-24 18:28:24,307 | INFO     | . initial setup = 9 s
[2025-05-24 20:50:55] 2025-05-24 18:28:24,307 | INFO     | . payload setup = 142 s
[2025-05-24 20:50:55] 2025-05-24 18:28:24,308 | INFO     | . stage-in = 0 s
[2025-05-24 20:50:55] 2025-05-24 18:28:24,308 | INFO     | . payload execution = 16457 s
[2025-05-24 20:50:55] 2025-05-24 18:28:24,308 | INFO     | . stage-out = 3 s
[2025-05-24 20:50:55] 2025-05-24 18:28:24,308 | INFO     | . log creation = 1 s
[2025-05-24 20:50:55] 2025-05-24 18:28:24,308 | INFO     | ..............................
[2025-05-24 20:50:55] 2025-05-24 18:28:24,422 | INFO     | 
[2025-05-24 20:50:55] 2025-05-24 18:28:24,422 | INFO     | job summary report
[2025-05-24 20:50:55] 2025-05-24 18:28:24,422 | INFO     | --------------------------------------------------
[2025-05-24 20:50:55] 2025-05-24 18:28:24,422 | INFO     | PanDA job id: 6665208609
[2025-05-24 20:50:55] 2025-05-24 18:28:24,422 | INFO     | task id: 44871837
[2025-05-24 20:50:55] 2025-05-24 18:28:24,422 | INFO     | errors: (none)
[2025-05-24 20:50:55] 2025-05-24 18:28:24,422 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 20:50:55] 2025-05-24 18:28:24,423 | INFO     | pilot state: finished 
[2025-05-24 20:50:55] 2025-05-24 18:28:24,423 | INFO     | transexitcode: 0
[2025-05-24 20:50:55] 2025-05-24 18:28:24,423 | INFO     | exeerrorcode: 0
[2025-05-24 20:50:55] 2025-05-24 18:28:24,423 | INFO     | exeerrordiag: 
[2025-05-24 20:50:55] 2025-05-24 18:28:24,423 | INFO     | exitcode: 0
[2025-05-24 20:50:55] 2025-05-24 18:28:24,423 | INFO     | exitmsg: OK
[2025-05-24 20:50:55] 2025-05-24 18:28:24,423 | INFO     | cpuconsumptiontime: 63496 s
[2025-05-24 20:50:55] 2025-05-24 18:28:24,423 | INFO     | nevents: 400
[2025-05-24 20:50:55] 2025-05-24 18:28:24,423 | INFO     | neventsw: 0
[2025-05-24 20:50:55] 2025-05-24 18:28:24,423 | INFO     | pid: 10145
[2025-05-24 20:50:55] 2025-05-24 18:28:24,424 | INFO     | pgrp: 10145
[2025-05-24 20:50:55] 2025-05-24 18:28:24,424 | INFO     | corecount: 8
[2025-05-24 20:50:55] 2025-05-24 18:28:24,424 | INFO     | event service: False
[2025-05-24 20:50:55] 2025-05-24 18:28:24,424 | INFO     | sizes: {0: 2393510, 1: 2393765, 12: 2393765, 23: 2393793, 34: 2393821, 44: 2393849, 55: 2394005, 66: 2394033, 76: 2394061, 87: 2394117, 88: 2394351, 98: 2394659, 1
[2025-05-24 20:50:55] 2025-05-24 18:28:24,424 | INFO     | --------------------------------------------------
[2025-05-24 20:50:55] 2025-05-24 18:28:24,424 | INFO     | 
[2025-05-24 20:50:55] 2025-05-24 18:28:24,424 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-05-24 20:50:55] 2025-05-24 18:28:24,709 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 20:50:55] 2025-05-24 18:28:24,709 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 20:50:55] 2025-05-24 18:28:24,709 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 20:50:55] 2025-05-24 18:28:24,709 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 20:50:55] 2025-05-24 18:28:24,710 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 20:50:55] 2025-05-24 18:28:24,710 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 20:50:55] 2025-05-24 18:28:24,710 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 20:50:55] 2025-05-24 18:28:24,710 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 20:50:55] 2025-05-24 18:28:24,710 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 20:50:55] 2025-05-24 18:28:24,710 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 20:50:55] 2025-05-24 18:28:24,710 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 20:50:55] 2025-05-24 18:28:24,710 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 20:50:55] 2025-05-24 18:28:24,710 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 20:50:55] 2025-05-24 18:28:24,710 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 20:50:55] 2025-05-24 18:28:24,710 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 20:50:55] 2025-05-24 18:28:24,710 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 20:50:55] 2025-05-24 18:28:24,711 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 20:50:55] 2025-05-24 18:28:24,711 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 20:50:55] 2025-05-24 18:28:24,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 20:50:55] 2025-05-24 18:28:24,711 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 20:50:55] 2025-05-24 18:28:24,711 | INFO     | job 6665208609 has completed (purged errors)
[2025-05-24 20:50:55] 2025-05-24 18:28:24,711 | INFO     | overall cleanup function is called
[2025-05-24 20:50:55] 2025-05-24 18:28:25,721 | INFO     | --- collectZombieJob: --- 10, [10145]
[2025-05-24 20:50:55] 2025-05-24 18:28:25,721 | INFO     | zombie collector waiting for pid 10145
[2025-05-24 20:50:55] 2025-05-24 18:28:25,721 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 20:50:55] 2025-05-24 18:28:25,721 | INFO     | collected zombie processes
[2025-05-24 20:50:55] 2025-05-24 18:28:25,721 | INFO     | will attempt to kill all subprocesses of pid=10145
[2025-05-24 20:50:55] 2025-05-24 18:28:25,832 | INFO     | process IDs to be killed: [10145] (in reverse order)
[2025-05-24 20:50:55] 2025-05-24 18:28:26,725 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 20:50:55] 2025-05-24 18:28:26,725 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 20:50:55] 2025-05-24 18:28:26,728 | INFO     | did not find any defunct processes belonging to 10145
[2025-05-24 20:50:55] 2025-05-24 18:28:26,731 | INFO     | did not find any defunct processes belonging to 10145
[2025-05-24 20:50:55] 2025-05-24 18:28:26,731 | INFO     | ready for new job
[2025-05-24 20:50:55] 2025-05-24 18:28:26,731 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 20:50:55] 2025-05-24 18:28:26,733 | INFO     | **************************************
[2025-05-24 20:50:55] 2025-05-24 18:28:26,733 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 20:50:55] 2025-05-24 18:28:26,733 | INFO     | **************************************
[2025-05-24 20:50:55] 2025-05-24 18:28:26,733 | INFO     | 
[2025-05-24 20:50:55] 2025-05-24 18:28:26,734 | INFO     | pilot is running in a VM
[2025-05-24 20:50:55] 2025-05-24 18:28:26,734 | INFO     | architecture information:
[2025-05-24 20:50:55] 2025-05-24 18:28:26,734 | INFO     | executing command: cat /etc/os-release
[2025-05-24 20:50:55] 2025-05-24 18:28:26,947 | INFO     | cat /etc/os-release:
[2025-05-24 20:50:55] NAME="CentOS Linux"
[2025-05-24 20:50:55] VERSION="7 (Core)"
[2025-05-24 20:50:55] ID="centos"
[2025-05-24 20:50:55] ID_LIKE="rhel fedora"
[2025-05-24 20:50:55] VERSION_ID="7"
[2025-05-24 20:50:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 20:50:55] ANSI_COLOR="0;31"
[2025-05-24 20:50:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 20:50:55] HOME_URL="https://www.centos.org/"
[2025-05-24 20:50:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 20:50:55] 
[2025-05-24 20:50:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 20:50:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 20:50:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 20:50:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 20:50:55] 
[2025-05-24 20:50:55] 2025-05-24 18:28:26,948 | INFO     | **************************************
[2025-05-24 20:50:55] 2025-05-24 18:28:27,451 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-05-24 20:50:55] 2025-05-24 18:28:27,576 | INFO     | PID=31953 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-24 20:50:55] 2025-05-24 18:28:27,577 | INFO     | .. there are 9 such processes running
[2025-05-24 20:50:55] 2025-05-24 18:28:27,578 | INFO     | sufficient remaining disk space (496802725888 B)
[2025-05-24 20:50:55] 2025-05-24 18:28:27,579 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 20:50:55] 2025-05-24 18:28:27,579 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 20:50:55] 2025-05-24 18:28:27,579 | INFO     | update_server=False
[2025-05-24 20:50:55] 2025-05-24 18:28:27,579 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 20:50:55] 2025-05-24 18:28:27,579 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 20:50:55] 2025-05-24 18:28:27,579 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 20:50:55] 2025-05-24 18:28:27,579 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 20:50:55] 2025-05-24 18:28:27,579 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 20:50:55] 2025-05-24 18:28:27,583 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 20:50:55] 2025-05-24 18:28:27,674 | INFO     | all data control threads have been joined
[2025-05-24 20:50:55] 2025-05-24 18:28:27,687 | INFO     | all payload control threads have been joined
[2025-05-24 20:50:55] 2025-05-24 18:28:27,898 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-24 20:50:55] 2025-05-24 18:28:27,898 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-24 20:50:55] 2025-05-24 18:28:27,898 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 20:50:55] 2025-05-24 18:28:27,898 | INFO     | will abort loop
[2025-05-24 20:50:55] 2025-05-24 18:28:28,391 | INFO     | all job control threads have been joined
[2025-05-24 20:50:55] 2025-05-24 18:28:28,585 | INFO     | [job] retrieve thread has finished
[2025-05-24 20:50:55] 2025-05-24 18:28:28,680 | INFO     | [data] control thread has finished
[2025-05-24 20:50:55] 2025-05-24 18:28:28,694 | INFO     | [payload] control thread has finished
[2025-05-24 20:50:55] 2025-05-24 18:28:28,706 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 20:50:55] 2025-05-24 18:28:28,733 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 20:50:55] 2025-05-24 18:28:28,740 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 20:50:55] 2025-05-24 18:28:28,761 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 20:50:55] 2025-05-24 18:28:28,904 | INFO     | [job] job monitor thread has finished
[2025-05-24 20:50:55] 2025-05-24 18:28:29,154 | INFO     | [payload] validate_post thread has finished
[2025-05-24 20:50:55] 2025-05-24 18:28:29,396 | INFO     | [job] control thread has finished
[2025-05-24 20:50:55] 2025-05-24 18:28:29,436 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 20:50:55] 2025-05-24 18:28:29,456 | INFO     | [payload] failed_post thread has finished
[2025-05-24 20:50:55] 2025-05-24 18:28:29,697 | INFO     | [data] copytool_in thread has finished
[2025-05-24 20:50:55] 2025-05-24 18:28:29,782 | INFO     | [job] validate thread has finished
[2025-05-24 20:50:55] 2025-05-24 18:28:30,016 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 20:50:55] 2025-05-24 18:28:30,442 | INFO     | [job] queue monitor thread has finished
[2025-05-24 20:50:55] 2025-05-24 18:28:30,743 | INFO     | [data] copytool_out thread has finished
[2025-05-24 20:50:55] 2025-05-24 18:28:31,592 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 20:50:55] 2025-05-24 18:28:31,846 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139982069593920)>', '<ExcThread(monitor, started 139981507000064)>']
[2025-05-24 20:50:55] 2025-05-24 18:28:32,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 20:50:55] 2025-05-24 18:28:32,609 | INFO     | [monitor] control thread has ended
[2025-05-24 20:50:55] 2025-05-24 18:28:36,872 | INFO     | all workflow threads have been joined
[2025-05-24 20:50:55] 2025-05-24 18:28:36,872 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 20:50:55] 2025-05-24 18:28:36,872 | INFO     | traces error code: 0
[2025-05-24 20:50:55] 2025-05-24 18:28:36,872 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 20:50:55] 2025-05-24 18:28:37,095 [wrapper] ==== pilot stdout END ====
[2025-05-24 20:50:55] 2025-05-24 18:28:37,111 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 20:50:55] 2025-05-24 18:28:37,185 [wrapper] pilotpid: 31953
[2025-05-24 20:50:55] 2025-05-24 18:28:37,202 [wrapper] Pilot exit status: 0
[2025-05-24 20:50:55] 2025-05-24 18:28:37,516 [wrapper] pandaids: 6665208609
[2025-05-24 20:50:55] 2025-05-24 18:28:38,113 [wrapper] cleanup supervisor_pilot  6390 31954
[2025-05-24 20:50:55] 2025-05-24 18:28:38,143 [wrapper] Test setup, not cleaning
[2025-05-24 20:50:55] 2025-05-24 18:28:38,239 [wrapper] apfmon messages muted
[2025-05-24 20:50:55] 2025-05-24 18:28:38,350 [wrapper] ==== wrapper stdout END ====
[2025-05-24 20:50:55] 2025-05-24 18:28:38,451 [wrapper] ==== wrapper stderr END ====
[2025-05-24 20:50:55]  *** Error codes and diagnostics ***
[2025-05-24 20:50:55]     "exeErrorCode": 0,
[2025-05-24 20:50:55]     "exeErrorDiag": "",
[2025-05-24 20:50:55]     "pilotErrorCode": 0,
[2025-05-24 20:50:55]     "pilotErrorDiag": "",
[2025-05-24 20:50:55]  *** Listing of results directory ***
[2025-05-24 20:50:55] total 419088
[2025-05-24 20:50:55] -rw-r--r--. 1 boinc boinc    495897 May 24 07:01 pilot3.tar.gz
[2025-05-24 20:50:55] -rwx------. 1 boinc boinc     37140 May 24 07:05 runpilot2-wrapper.sh
[2025-05-24 20:50:55] -rw-r--r--. 1 boinc boinc      5111 May 24 07:05 queuedata.json
[2025-05-24 20:50:55] -rw-r--r--. 1 boinc boinc       100 May 24 15:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 20:50:55] -rwxr-xr-x. 1 boinc boinc      7986 May 24 15:43 run_atlas
[2025-05-24 20:50:55] -rw-r--r--. 1 boinc boinc       105 May 24 15:43 job.xml
[2025-05-24 20:50:55] -rw-r--r--. 1 boinc boinc      6372 May 24 15:43 init_data.xml
[2025-05-24 20:50:55] -rw-r--r--. 2 boinc boinc 225868708 May 24 15:43 EVNT.44871834._000181.pool.root.1
[2025-05-24 20:50:55] -rw-r--r--. 2 boinc boinc     15093 May 24 15:43 start_atlas.sh
[2025-05-24 20:50:55] drwxrwx--x. 2 boinc boinc        68 May 24 15:43 shared
[2025-05-24 20:50:55] -rw-r--r--. 2 boinc boinc    508879 May 24 15:43 input.tar.gz
[2025-05-24 20:50:55] -rw-r--r--. 1 boinc boinc         0 May 24 15:43 boinc_lockfile
[2025-05-24 20:50:55] -rw-r--r--. 1 boinc boinc      2557 May 24 15:43 pandaJob.out
[2025-05-24 20:50:55] -rw-------. 1 boinc boinc    988556 May 24 15:46 agis_schedconf.cvmfs.json
[2025-05-24 20:50:55] drwx------. 4 boinc boinc      4096 May 24 15:47 pilot3
[2025-05-24 20:50:55] -rw-r--r--. 1 boinc boinc       531 May 24 20:25 boinc_task_state.xml
[2025-05-24 20:50:55] -rw-------. 1 boinc boinc 195740664 May 24 20:25 HITS.44871837._004514.pool.root.1
[2025-05-24 20:50:55] -rw-------. 1 boinc boinc      1015 May 24 20:26 memory_monitor_summary.json
[2025-05-24 20:50:55] -rw-------. 1 boinc boinc   1596740 May 24 20:26 agis_ddmendpoints.agis.ALL.json
[2025-05-24 20:50:55] -rw-------. 1 boinc boinc    411085 May 24 20:26 log.44871837._004514.job.log.tgz.1
[2025-05-24 20:50:55] -rw-------. 1 boinc boinc        95 May 24 20:27 pilot_heartbeat.json
[2025-05-24 20:50:55] -rw-------. 1 boinc boinc      7682 May 24 20:28 heartbeat.json
[2025-05-24 20:50:55] -rw-------. 1 boinc boinc      5118 May 24 20:28 pilotlog.txt
[2025-05-24 20:50:55] -rw-------. 1 boinc boinc   1447339 May 24 20:28 log.44871837._004514.job.log.1
[2025-05-24 20:50:55] -rw-------. 1 boinc boinc       357 May 24 20:28 output.list
[2025-05-24 20:50:55] -rw-r--r--. 1 boinc boinc       620 May 24 20:28 runtime_log
[2025-05-24 20:50:55] -rw-------. 1 boinc boinc   1873920 May 24 20:28 result.tar.gz
[2025-05-24 20:50:55] -rw-------. 1 boinc boinc       657 May 24 20:28 ZFRMDmgFwc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmfNLKDmb4R3Fm.diag
[2025-05-24 20:50:55] -rw-r--r--. 1 boinc boinc      8673 May 24 20:28 runtime_log.err
[2025-05-24 20:50:55] -rw-r--r--. 1 boinc boinc      8192 May 24 20:50 boinc_mmap_file
[2025-05-24 20:50:55] -rw-r--r--. 1 boinc boinc        28 May 24 20:50 wrapper_checkpoint.txt
[2025-05-24 20:50:55] -rw-r--r--. 1 boinc boinc     20838 May 24 20:50 stderr.txt
[2025-05-24 20:50:55] HITS file was successfully produced:
[2025-05-24 20:50:55] -rw-------. 1 boinc boinc 195740664 May 24 20:25 shared/HITS.pool.root.1
[2025-05-24 20:50:55]  *** Contents of shared directory: ***
[2025-05-24 20:50:55] total 414080
[2025-05-24 20:50:55] -rw-r--r--. 2 boinc boinc 225868708 May 24 15:43 ATLAS.root_0
[2025-05-24 20:50:55] -rw-r--r--. 2 boinc boinc     15093 May 24 15:43 start_atlas.sh
[2025-05-24 20:50:55] -rw-r--r--. 2 boinc boinc    508879 May 24 15:43 input.tar.gz
[2025-05-24 20:50:55] -rw-------. 1 boinc boinc 195740664 May 24 20:25 HITS.pool.root.1
[2025-05-24 20:50:55] -rw-------. 1 boinc boinc   1873920 May 24 20:28 result.tar.gz
20:50:57 (21569): run_atlas exited; CPU time 63707.156225
20:50:57 (21569): called boinc_finish(0)

</stderr_txt>
]]>

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