Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:54:35 (16885): wrapper (7.7.26015): starting
15:54:35 (16885): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 15:54:35] Arguments: --nthreads 8
[2025-05-24 15:54:35] Threads: 8
[2025-05-24 15:54:35] Checking for CVMFS
[2025-05-24 15:54:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 15:54:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 15:54:36] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 15:54:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 15:54:37] 2.11.2.0 13493 17581 91748 146368 0 59 20167404 25165824 2026 130560 0 8955923 99.671 12691473 2274 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-24 15:54:37] CVMFS is ok
[2025-05-24 15:54:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 15:54:37] Checking for apptainer binary...
[2025-05-24 15:54:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 15:54:37] Running /usr/bin/apptainer --version
[2025-05-24 15:54:38] apptainer version 1.3.2-1.el7
[2025-05-24 15:54:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 16:25:03] cg-vwn488.simple-grid.lan
[2025-05-24 16:25:03] apptainer works
[2025-05-24 16:25:03] Set ATHENA_PROC_NUMBER=8
[2025-05-24 16:25:03] Set ATHENA_CORE_NUMBER=8
[2025-05-24 16:25:03] Starting ATLAS job with PandaID=6665270948
[2025-05-24 16:25:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 21:31:13]  *** The last 200 lines of the pilot log: ***
[2025-05-24 21:31:13] 2025-05-24 19:16:46,685 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 21:31:13] 2025-05-24 19:16:46,685 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 21:31:13] 2025-05-24 19:16:46,691 | INFO     | fitting pss+swap vs Time
[2025-05-24 21:31:13] 2025-05-24 19:16:46,691 | INFO     | sum of square deviations: 6448679050.0
[2025-05-24 21:31:13] 2025-05-24 19:16:46,694 | INFO     | sum of deviations: 49911115182.99999
[2025-05-24 21:31:13] 2025-05-24 19:16:46,694 | INFO     | mean x: 1748105711.0
[2025-05-24 21:31:13] 2025-05-24 19:16:46,694 | INFO     | mean y: 2482526.3963636365
[2025-05-24 21:31:13] 2025-05-24 19:16:46,694 | INFO     | -- intersect: -13527405504.51457
[2025-05-24 21:31:13] 2025-05-24 19:16:46,695 | INFO     | intersect: -13527405504.51457
[2025-05-24 21:31:13] 2025-05-24 19:16:46,695 | INFO     | chi2: 5.331966554614109
[2025-05-24 21:31:13] 2025-05-24 19:16:46,695 | INFO     | sum of square deviations: 6103286527.5
[2025-05-24 21:31:13] 2025-05-24 19:16:46,698 | INFO     | sum of deviations: 67139136685.00001
[2025-05-24 21:31:13] 2025-05-24 19:16:46,698 | INFO     | mean x: 1748105558.5
[2025-05-24 21:31:13] 2025-05-24 19:16:46,698 | INFO     | mean y: 2490013.814814815
[2025-05-24 21:31:13] 2025-05-24 19:16:46,698 | INFO     | -- intersect: -19227526060.822075
[2025-05-24 21:31:13] 2025-05-24 19:16:46,698 | INFO     | intersect: -19227526060.822075
[2025-05-24 21:31:13] 2025-05-24 19:16:46,699 | INFO     | chi2: 4.598033828511508
[2025-05-24 21:31:13] 2025-05-24 19:16:46,699 | INFO     | current chi2=4.598033828511508 (change=13.76476612493901 %)
[2025-05-24 21:31:13] 2025-05-24 19:16:46,699 | INFO     | right removable region: 269
[2025-05-24 21:31:13] 2025-05-24 19:16:46,699 | INFO     | sum of square deviations: 6103286527.5
[2025-05-24 21:31:13] 2025-05-24 19:16:46,702 | INFO     | sum of deviations: -39231324609.0
[2025-05-24 21:31:13] 2025-05-24 19:16:46,702 | INFO     | mean x: 1748105863.5
[2025-05-24 21:31:13] 2025-05-24 19:16:46,702 | INFO     | mean y: 2521825.6296296297
[2025-05-24 21:31:13] 2025-05-24 19:16:46,702 | INFO     | -- intersect: 11239174123.183874
[2025-05-24 21:31:13] 2025-05-24 19:16:46,702 | INFO     | intersect: 11239174123.183874
[2025-05-24 21:31:13] 2025-05-24 19:16:46,703 | INFO     | chi2: 1.3203613615634788
[2025-05-24 21:31:13] 2025-05-24 19:16:46,703 | INFO     | current chi2=1.3203613615634788 (change=75.23687840050532 %)
[2025-05-24 21:31:13] 2025-05-24 19:16:46,703 | INFO     | sum of square deviations: 5770452380.0
[2025-05-24 21:31:13] 2025-05-24 19:16:46,705 | INFO     | sum of deviations: -58827926640.0
[2025-05-24 21:31:13] 2025-05-24 19:16:46,705 | INFO     | mean x: 1748106016.0
[2025-05-24 21:31:13] 2025-05-24 19:16:46,706 | INFO     | mean y: 2530728.033962264
[2025-05-24 21:31:13] 2025-05-24 19:16:46,706 | INFO     | -- intersect: 17823915551.27908
[2025-05-24 21:31:13] 2025-05-24 19:16:46,706 | INFO     | intersect: 17823915551.27908
[2025-05-24 21:31:13] 2025-05-24 19:16:46,707 | INFO     | chi2: 0.9658003545445142
[2025-05-24 21:31:13] 2025-05-24 19:16:46,707 | INFO     | current chi2=0.9658003545445142 (change=26.85333101531527 %)
[2025-05-24 21:31:13] 2025-05-24 19:16:46,707 | INFO     | sum of square deviations: 5449944045.0
[2025-05-24 21:31:13] 2025-05-24 19:16:46,709 | INFO     | sum of deviations: -54802424034.0
[2025-05-24 21:31:13] 2025-05-24 19:16:46,710 | INFO     | mean x: 1748106168.5
[2025-05-24 21:31:13] 2025-05-24 19:16:46,710 | INFO     | mean y: 2528790.6153846155
[2025-05-24 21:31:13] 2025-05-24 19:16:46,710 | INFO     | -- intersect: 17580774495.812904
[2025-05-24 21:31:13] 2025-05-24 19:16:46,710 | INFO     | intersect: 17580774495.812904
[2025-05-24 21:31:13] 2025-05-24 19:16:46,710 | INFO     | chi2: 0.9548785316417258
[2025-05-24 21:31:13] 2025-05-24 19:16:46,710 | INFO     | current chi2=0.9548785316417258 (change=1.1308572057772042 %)
[2025-05-24 21:31:13] 2025-05-24 19:16:46,711 | INFO     | left removable region: 30
[2025-05-24 21:31:13] 2025-05-24 19:16:46,711 | INFO     | sum of square deviations: 4233158440.0
[2025-05-24 21:31:13] 2025-05-24 19:16:46,713 | INFO     | sum of deviations: -11124544196.999998
[2025-05-24 21:31:13] 2025-05-24 19:16:46,713 | INFO     | mean x: 1748106443.0
[2025-05-24 21:31:13] 2025-05-24 19:16:46,713 | INFO     | mean y: 2523925.133891213
[2025-05-24 21:31:13] 2025-05-24 19:16:46,713 | INFO     | -- intersect: 4596466642.339146
[2025-05-24 21:31:13] 2025-05-24 19:16:46,713 | INFO     | intersect: 4596466642.339146
[2025-05-24 21:31:13] 2025-05-24 19:16:46,714 | INFO     | chi2: 0.09083200852287403
[2025-05-24 21:31:13] 2025-05-24 19:16:46,714 | INFO     | -- intersect: 4596466642.339146
[2025-05-24 21:31:13] 2025-05-24 19:16:46,714 | INFO     | current memory leak: -2.63 B/s (using 239 data points, chi2=0.09)
[2025-05-24 21:31:13] 2025-05-24 19:16:46,715 | INFO     | ..............................
[2025-05-24 21:31:13] 2025-05-24 19:16:46,715 | INFO     | . Timing measurements:
[2025-05-24 21:31:13] 2025-05-24 19:16:46,715 | INFO     | . get job = 0 s
[2025-05-24 21:31:13] 2025-05-24 19:16:46,715 | INFO     | . initial setup = 4 s
[2025-05-24 21:31:13] 2025-05-24 19:16:46,715 | INFO     | . payload setup = 135 s
[2025-05-24 21:31:13] 2025-05-24 19:16:46,715 | INFO     | . stage-in = 0 s
[2025-05-24 21:31:13] 2025-05-24 19:16:46,715 | INFO     | . payload execution = 16902 s
[2025-05-24 21:31:13] 2025-05-24 19:16:46,715 | INFO     | . stage-out = 3 s
[2025-05-24 21:31:13] 2025-05-24 19:16:46,715 | INFO     | . log creation = 1 s
[2025-05-24 21:31:13] 2025-05-24 19:16:46,715 | INFO     | ..............................
[2025-05-24 21:31:13] 2025-05-24 19:16:47,029 | INFO     | 
[2025-05-24 21:31:13] 2025-05-24 19:16:47,029 | INFO     | job summary report
[2025-05-24 21:31:13] 2025-05-24 19:16:47,029 | INFO     | --------------------------------------------------
[2025-05-24 21:31:13] 2025-05-24 19:16:47,030 | INFO     | PanDA job id: 6665270948
[2025-05-24 21:31:13] 2025-05-24 19:16:47,030 | INFO     | task id: 44871837
[2025-05-24 21:31:13] 2025-05-24 19:16:47,030 | INFO     | errors: (none)
[2025-05-24 21:31:13] 2025-05-24 19:16:47,030 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 21:31:13] 2025-05-24 19:16:47,030 | INFO     | pilot state: finished 
[2025-05-24 21:31:13] 2025-05-24 19:16:47,030 | INFO     | transexitcode: 0
[2025-05-24 21:31:13] 2025-05-24 19:16:47,030 | INFO     | exeerrorcode: 0
[2025-05-24 21:31:13] 2025-05-24 19:16:47,030 | INFO     | exeerrordiag: 
[2025-05-24 21:31:13] 2025-05-24 19:16:47,030 | INFO     | exitcode: 0
[2025-05-24 21:31:13] 2025-05-24 19:16:47,030 | INFO     | exitmsg: OK
[2025-05-24 21:31:13] 2025-05-24 19:16:47,031 | INFO     | cpuconsumptiontime: 64964 s
[2025-05-24 21:31:13] 2025-05-24 19:16:47,031 | INFO     | nevents: 400
[2025-05-24 21:31:13] 2025-05-24 19:16:47,031 | INFO     | neventsw: 0
[2025-05-24 21:31:13] 2025-05-24 19:16:47,031 | INFO     | pid: 13771
[2025-05-24 21:31:13] 2025-05-24 19:16:47,031 | INFO     | pgrp: 13771
[2025-05-24 21:31:13] 2025-05-24 19:16:47,031 | INFO     | corecount: 8
[2025-05-24 21:31:13] 2025-05-24 19:16:47,031 | INFO     | event service: False
[2025-05-24 21:31:13] 2025-05-24 19:16:47,031 | INFO     | sizes: {0: 2393513, 1: 2393712, 12: 2393712, 22: 2393740, 33: 2393768, 44: 2393824, 54: 2393980, 65: 2394008, 76: 2394036, 81: 2394298, 87: 2394326, 17042: 2425502
[2025-05-24 21:31:13] 2025-05-24 19:16:47,031 | INFO     | --------------------------------------------------
[2025-05-24 21:31:13] 2025-05-24 19:16:47,031 | INFO     | 
[2025-05-24 21:31:13] 2025-05-24 19:16:47,032 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-05-24 21:31:13] 2025-05-24 19:16:47,302 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 21:31:13] 2025-05-24 19:16:47,302 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 21:31:13] 2025-05-24 19:16:47,302 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 21:31:13] 2025-05-24 19:16:47,302 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 21:31:13] 2025-05-24 19:16:47,302 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 21:31:13] 2025-05-24 19:16:47,302 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 21:31:13] 2025-05-24 19:16:47,303 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 21:31:13] 2025-05-24 19:16:47,303 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 21:31:13] 2025-05-24 19:16:47,303 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 21:31:13] 2025-05-24 19:16:47,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 21:31:13] 2025-05-24 19:16:47,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 21:31:13] 2025-05-24 19:16:47,303 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 21:31:13] 2025-05-24 19:16:47,303 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 21:31:13] 2025-05-24 19:16:47,303 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 21:31:13] 2025-05-24 19:16:47,303 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 21:31:13] 2025-05-24 19:16:47,304 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 21:31:13] 2025-05-24 19:16:47,304 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 21:31:13] 2025-05-24 19:16:47,304 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 21:31:13] 2025-05-24 19:16:47,304 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 21:31:13] 2025-05-24 19:16:47,304 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 21:31:13] 2025-05-24 19:16:47,304 | INFO     | job 6665270948 has completed (purged errors)
[2025-05-24 21:31:13] 2025-05-24 19:16:47,304 | INFO     | overall cleanup function is called
[2025-05-24 21:31:13] 2025-05-24 19:16:48,313 | INFO     | --- collectZombieJob: --- 10, [13771]
[2025-05-24 21:31:13] 2025-05-24 19:16:48,313 | INFO     | zombie collector waiting for pid 13771
[2025-05-24 21:31:13] 2025-05-24 19:16:48,313 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 21:31:13] 2025-05-24 19:16:48,314 | INFO     | collected zombie processes
[2025-05-24 21:31:13] 2025-05-24 19:16:48,314 | INFO     | will attempt to kill all subprocesses of pid=13771
[2025-05-24 21:31:13] 2025-05-24 19:16:48,419 | INFO     | process IDs to be killed: [13771] (in reverse order)
[2025-05-24 21:31:13] 2025-05-24 19:16:49,294 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 21:31:13] 2025-05-24 19:16:49,295 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 21:31:13] 2025-05-24 19:16:49,298 | INFO     | did not find any defunct processes belonging to 13771
[2025-05-24 21:31:13] 2025-05-24 19:16:49,301 | INFO     | did not find any defunct processes belonging to 13771
[2025-05-24 21:31:13] 2025-05-24 19:16:49,301 | INFO     | ready for new job
[2025-05-24 21:31:13] 2025-05-24 19:16:49,301 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 21:31:13] 2025-05-24 19:16:49,303 | INFO     | **************************************
[2025-05-24 21:31:13] 2025-05-24 19:16:49,303 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 21:31:13] 2025-05-24 19:16:49,303 | INFO     | **************************************
[2025-05-24 21:31:13] 2025-05-24 19:16:49,303 | INFO     | 
[2025-05-24 21:31:13] 2025-05-24 19:16:49,304 | INFO     | pilot is running in a VM
[2025-05-24 21:31:13] 2025-05-24 19:16:49,304 | INFO     | architecture information:
[2025-05-24 21:31:13] 2025-05-24 19:16:49,317 | INFO     | executing command: cat /etc/os-release
[2025-05-24 21:31:13] 2025-05-24 19:16:49,636 | INFO     | cat /etc/os-release:
[2025-05-24 21:31:13] NAME="CentOS Linux"
[2025-05-24 21:31:13] VERSION="7 (Core)"
[2025-05-24 21:31:13] ID="centos"
[2025-05-24 21:31:13] ID_LIKE="rhel fedora"
[2025-05-24 21:31:13] VERSION_ID="7"
[2025-05-24 21:31:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 21:31:13] ANSI_COLOR="0;31"
[2025-05-24 21:31:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 21:31:13] HOME_URL="https://www.centos.org/"
[2025-05-24 21:31:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 21:31:13] 
[2025-05-24 21:31:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 21:31:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 21:31:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 21:31:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 21:31:13] 
[2025-05-24 21:31:13] 2025-05-24 19:16:49,637 | INFO     | **************************************
[2025-05-24 21:31:13] 2025-05-24 19:16:50,140 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-05-24 21:31:13] 2025-05-24 19:16:50,268 | INFO     | sufficient remaining disk space (495683895296 B)
[2025-05-24 21:31:13] 2025-05-24 19:16:50,268 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 21:31:13] 2025-05-24 19:16:50,268 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 21:31:13] 2025-05-24 19:16:50,268 | INFO     | update_server=False
[2025-05-24 21:31:13] 2025-05-24 19:16:50,268 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 21:31:13] 2025-05-24 19:16:50,269 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 21:31:13] 2025-05-24 19:16:50,269 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 21:31:13] 2025-05-24 19:16:50,269 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 21:31:13] 2025-05-24 19:16:50,269 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 21:31:13] 2025-05-24 19:16:50,269 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 21:31:13] 2025-05-24 19:16:50,360 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-24 21:31:13] 2025-05-24 19:16:50,360 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-24 21:31:13] 2025-05-24 19:16:50,360 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 21:31:13] 2025-05-24 19:16:50,361 | INFO     | will abort loop
[2025-05-24 21:31:13] 2025-05-24 19:16:50,631 | INFO     | all payload control threads have been joined
[2025-05-24 21:31:13] 2025-05-24 19:16:51,204 | INFO     | all data control threads have been joined
[2025-05-24 21:31:13] 2025-05-24 19:16:51,274 | INFO     | [job] retrieve thread has finished
[2025-05-24 21:31:13] 2025-05-24 19:16:51,363 | INFO     | [payload] failed_post thread has finished
[2025-05-24 21:31:13] 2025-05-24 19:16:51,366 | INFO     | [job] job monitor thread has finished
[2025-05-24 21:31:13] 2025-05-24 19:16:51,373 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 21:31:13] 2025-05-24 19:16:51,470 | INFO     | all job control threads have been joined
[2025-05-24 21:31:13] 2025-05-24 19:16:51,503 | INFO     | [job] validate thread has finished
[2025-05-24 21:31:13] 2025-05-24 19:16:51,636 | INFO     | [payload] control thread has finished
[2025-05-24 21:31:13] 2025-05-24 19:16:51,851 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 21:31:13] 2025-05-24 19:16:51,904 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 21:31:13] 2025-05-24 19:16:51,952 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 21:31:13] 2025-05-24 19:16:52,180 | INFO     | [data] copytool_in thread has finished
[2025-05-24 21:31:13] 2025-05-24 19:16:52,210 | INFO     | [data] control thread has finished
[2025-05-24 21:31:13] 2025-05-24 19:16:52,276 | INFO     | [data] copytool_out thread has finished
[2025-05-24 21:31:13] 2025-05-24 19:16:52,476 | INFO     | [job] control thread has finished
[2025-05-24 21:31:13] 2025-05-24 19:16:52,490 | INFO     | [payload] validate_post thread has finished
[2025-05-24 21:31:13] 2025-05-24 19:16:52,857 | INFO     | [job] queue monitor thread has finished
[2025-05-24 21:31:13] 2025-05-24 19:16:53,089 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 21:31:13] 2025-05-24 19:16:57,100 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 21:31:13] 2025-05-24 19:17:00,897 | INFO     | job.realtimelogging is not enabled
[2025-05-24 21:31:13] 2025-05-24 19:17:01,903 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 21:31:13] 2025-05-24 19:17:02,245 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140530395457344)>', '<ExcThread(monitor, started 140529945782016)>']
[2025-05-24 21:31:13] 2025-05-24 19:17:02,340 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 21:31:13] 2025-05-24 19:17:02,340 | INFO     | [monitor] control thread has ended
[2025-05-24 21:31:13] 2025-05-24 19:17:07,271 | INFO     | all workflow threads have been joined
[2025-05-24 21:31:13] 2025-05-24 19:17:07,271 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 21:31:13] 2025-05-24 19:17:07,272 | INFO     | traces error code: 0
[2025-05-24 21:31:13] 2025-05-24 19:17:07,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 21:31:13] 2025-05-24 19:17:07,417 [wrapper] ==== pilot stdout END ====
[2025-05-24 21:31:13] 2025-05-24 19:17:07,426 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 21:31:13] 2025-05-24 19:17:07,429 [wrapper] pilotpid: 5156
[2025-05-24 21:31:13] 2025-05-24 19:17:07,432 [wrapper] Pilot exit status: 0
[2025-05-24 21:31:13] 2025-05-24 19:17:07,453 [wrapper] pandaids: 6665270948
[2025-05-24 21:31:13] 2025-05-24 19:17:07,593 [wrapper] cleanup supervisor_pilot 27517 5157
[2025-05-24 21:31:13] 2025-05-24 19:17:07,677 [wrapper] Test setup, not cleaning
[2025-05-24 21:31:13] 2025-05-24 19:17:07,757 [wrapper] apfmon messages muted
[2025-05-24 21:31:13] 2025-05-24 19:17:07,865 [wrapper] ==== wrapper stdout END ====
[2025-05-24 21:31:13] 2025-05-24 19:17:07,983 [wrapper] ==== wrapper stderr END ====
[2025-05-24 21:31:13]  *** Error codes and diagnostics ***
[2025-05-24 21:31:13]     "exeErrorCode": 0,
[2025-05-24 21:31:13]     "exeErrorDiag": "",
[2025-05-24 21:31:13]     "pilotErrorCode": 0,
[2025-05-24 21:31:13]     "pilotErrorDiag": "",
[2025-05-24 21:31:13]  *** Listing of results directory ***
[2025-05-24 21:31:13] total 424408
[2025-05-24 21:31:13] -rw-r--r--. 1 boinc boinc    495897 May 24 07:59 pilot3.tar.gz
[2025-05-24 21:31:13] -rw-r--r--. 1 boinc boinc      5111 May 24 08:00 queuedata.json
[2025-05-24 21:31:13] -rwx------. 1 boinc boinc     37140 May 24 08:01 runpilot2-wrapper.sh
[2025-05-24 21:31:13] -rw-r--r--. 1 boinc boinc       100 May 24 15:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 21:31:13] -rwxr-xr-x. 1 boinc boinc      7986 May 24 15:54 run_atlas
[2025-05-24 21:31:13] -rw-r--r--. 1 boinc boinc       105 May 24 15:54 job.xml
[2025-05-24 21:31:13] -rw-r--r--. 1 boinc boinc      6371 May 24 15:54 init_data.xml
[2025-05-24 21:31:13] -rw-r--r--. 2 boinc boinc 224740209 May 24 15:54 EVNT.44871834._000279.pool.root.1
[2025-05-24 21:31:13] -rw-r--r--. 2 boinc boinc     15093 May 24 15:54 start_atlas.sh
[2025-05-24 21:31:13] drwxrwx--x. 2 boinc boinc        68 May 24 15:54 shared
[2025-05-24 21:31:13] -rw-r--r--. 2 boinc boinc    508875 May 24 15:54 input.tar.gz
[2025-05-24 21:31:13] -rw-r--r--. 1 boinc boinc         0 May 24 15:54 boinc_lockfile
[2025-05-24 21:31:13] -rw-r--r--. 1 boinc boinc      2555 May 24 16:25 pandaJob.out
[2025-05-24 21:31:13] -rw-------. 1 boinc boinc    988556 May 24 16:28 agis_schedconf.cvmfs.json
[2025-05-24 21:31:13] drwx------. 4 boinc boinc      4096 May 24 16:28 pilot3
[2025-05-24 21:31:13] -rw-------. 1 boinc boinc 202262566 May 24 21:14 HITS.44871837._006969.pool.root.1
[2025-05-24 21:31:13] -rw-r--r--. 1 boinc boinc       531 May 24 21:14 boinc_task_state.xml
[2025-05-24 21:31:13] -rw-------. 1 boinc boinc      1016 May 24 21:15 memory_monitor_summary.json
[2025-05-24 21:31:13] -rw-------. 1 boinc boinc   1596740 May 24 21:15 agis_ddmendpoints.agis.ALL.json
[2025-05-24 21:31:13] -rw-------. 1 boinc boinc    417156 May 24 21:15 log.44871837._006969.job.log.tgz.1
[2025-05-24 21:31:13] -rw-------. 1 boinc boinc        95 May 24 21:16 pilot_heartbeat.json
[2025-05-24 21:31:13] -rw-------. 1 boinc boinc      7685 May 24 21:16 heartbeat.json
[2025-05-24 21:31:13] -rw-------. 1 boinc boinc      4797 May 24 21:17 pilotlog.txt
[2025-05-24 21:31:13] -rw-------. 1 boinc boinc   1472535 May 24 21:17 log.44871837._006969.job.log.1
[2025-05-24 21:31:13] -rw-------. 1 boinc boinc       357 May 24 21:17 output.list
[2025-05-24 21:31:13] -rw-r--r--. 1 boinc boinc       620 May 24 21:17 runtime_log
[2025-05-24 21:31:13] -rw-------. 1 boinc boinc   1904640 May 24 21:17 result.tar.gz
[2025-05-24 21:31:13] -rw-r--r--. 1 boinc boinc      8659 May 24 21:17 runtime_log.err
[2025-05-24 21:31:13] -rw-------. 1 boinc boinc       657 May 24 21:17 3bdNDmP8wc7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGgPKDmAd24Fn.diag
[2025-05-24 21:31:13] -rw-r--r--. 1 boinc boinc      8192 May 24 21:31 boinc_mmap_file
[2025-05-24 21:31:13] -rw-r--r--. 1 boinc boinc        28 May 24 21:31 wrapper_checkpoint.txt
[2025-05-24 21:31:13] -rw-r--r--. 1 boinc boinc     20523 May 24 21:31 stderr.txt
[2025-05-24 21:31:13] HITS file was successfully produced:
[2025-05-24 21:31:13] -rw-------. 1 boinc boinc 202262566 May 24 21:14 shared/HITS.pool.root.1
[2025-05-24 21:31:13]  *** Contents of shared directory: ***
[2025-05-24 21:31:13] total 419376
[2025-05-24 21:31:13] -rw-r--r--. 2 boinc boinc 224740209 May 24 15:54 ATLAS.root_0
[2025-05-24 21:31:13] -rw-r--r--. 2 boinc boinc     15093 May 24 15:54 start_atlas.sh
[2025-05-24 21:31:13] -rw-r--r--. 2 boinc boinc    508875 May 24 15:54 input.tar.gz
[2025-05-24 21:31:13] -rw-------. 1 boinc boinc 202262566 May 24 21:14 HITS.pool.root.1
[2025-05-24 21:31:13] -rw-------. 1 boinc boinc   1904640 May 24 21:17 result.tar.gz
21:31:15 (16885): run_atlas exited; CPU time 65190.690185
21:31:15 (16885): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN