Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:51:48 (3657420): wrapper (7.7.26015): starting
09:51:48 (3657420): wrapper: running run_atlas (--nthreads 4)
[2025-05-25 09:51:48] Arguments: --nthreads 4
[2025-05-25 09:51:48] Threads: 4
[2025-05-25 09:51:48] Checking for CVMFS
[2025-05-25 09:51:48] No cvmfs_config command found, will try listing directly
[2025-05-25 09:51:48] CVMFS is ok
[2025-05-25 09:51:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 09:51:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 09:51:48] Further information can be found at the LHC@home message board.
[2025-05-25 09:51:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 09:51:48] Checking for apptainer binary...
[2025-05-25 09:51:48] which: no apptainer in ((null))
[2025-05-25 09:51:48] apptainer is not installed, using version from CVMFS
[2025-05-25 09:51:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 09:51:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-05-25 09:51:49] apptainer works
[2025-05-25 09:51:49] Set ATHENA_PROC_NUMBER=4
[2025-05-25 09:51:49] Set ATHENA_CORE_NUMBER=4
[2025-05-25 09:51:49] Starting ATLAS job with PandaID=6665150379
[2025-05-25 09:51:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 13:28:48]  *** The last 200 lines of the pilot log: ***
[2025-05-25 13:28:48] 2025-05-25 11:28:26,004 | INFO     | intersect: -24734658970.654907
[2025-05-25 13:28:48] 2025-05-25 11:28:26,004 | INFO     | chi2: 1.4835749199784865
[2025-05-25 13:28:48] 2025-05-25 11:28:26,004 | INFO     | sum of square deviations: 2750295288.0
[2025-05-25 13:28:48] 2025-05-25 11:28:26,006 | INFO     | sum of deviations: 40672411240.00001
[2025-05-25 13:28:48] 2025-05-25 11:28:26,006 | INFO     | mean x: 1748165842.0
[2025-05-25 13:28:48] 2025-05-25 11:28:26,006 | INFO     | mean y: 2305441.874396135
[2025-05-25 13:28:48] 2025-05-25 11:28:26,006 | INFO     | -- intersect: -25850234956.88764
[2025-05-25 13:28:48] 2025-05-25 11:28:26,006 | INFO     | intersect: -25850234956.88764
[2025-05-25 13:28:48] 2025-05-25 11:28:26,006 | INFO     | chi2: 1.4837059807117794
[2025-05-25 13:28:48] 2025-05-25 11:28:26,006 | INFO     | current chi2=1.4837059807117794 (change=-0.008834116263898765 %)
[2025-05-25 13:28:48] 2025-05-25 11:28:26,007 | INFO     | right removable region: 206
[2025-05-25 13:28:48] 2025-05-25 11:28:26,007 | INFO     | sum of square deviations: 2750295288.0
[2025-05-25 13:28:48] 2025-05-25 11:28:26,008 | INFO     | sum of deviations: 11229727717.0
[2025-05-25 13:28:48] 2025-05-25 11:28:26,009 | INFO     | mean x: 1748166147.0
[2025-05-25 13:28:48] 2025-05-25 11:28:26,009 | INFO     | mean y: 2328885.961352657
[2025-05-25 13:28:48] 2025-05-25 11:28:26,009 | INFO     | -- intersect: -7135606418.855633
[2025-05-25 13:28:48] 2025-05-25 11:28:26,009 | INFO     | intersect: -7135606418.855633
[2025-05-25 13:28:48] 2025-05-25 11:28:26,009 | INFO     | chi2: 0.019654986500081285
[2025-05-25 13:28:48] 2025-05-25 11:28:26,009 | INFO     | current chi2=0.019654986500081285 (change=98.67516050349744 %)
[2025-05-25 13:28:48] 2025-05-25 11:28:26,010 | INFO     | sum of square deviations: 2555770710.5
[2025-05-25 13:28:48] 2025-05-25 11:28:26,011 | INFO     | sum of deviations: 6571944281.499998
[2025-05-25 13:28:48] 2025-05-25 11:28:26,011 | INFO     | mean x: 1748166299.5
[2025-05-25 13:28:48] 2025-05-25 11:28:26,011 | INFO     | mean y: 2332538.1831683167
[2025-05-25 13:28:48] 2025-05-25 11:28:26,011 | INFO     | -- intersect: -4492926550.556607
[2025-05-25 13:28:48] 2025-05-25 11:28:26,011 | INFO     | intersect: -4492926550.556607
[2025-05-25 13:28:48] 2025-05-25 11:28:26,012 | INFO     | chi2: 0.004082376655620112
[2025-05-25 13:28:48] 2025-05-25 11:28:26,012 | INFO     | current chi2=0.004082376655620112 (change=79.22981704615655 %)
[2025-05-25 13:28:48] 2025-05-25 11:28:26,012 | INFO     | sum of square deviations: 2370641658.0
[2025-05-25 13:28:48] 2025-05-25 11:28:26,013 | INFO     | sum of deviations: 5237699303.0
[2025-05-25 13:28:48] 2025-05-25 11:28:26,013 | INFO     | mean x: 1748166452.0
[2025-05-25 13:28:48] 2025-05-25 11:28:26,013 | INFO     | mean y: 2333622.954314721
[2025-05-25 13:28:48] 2025-05-25 11:28:26,014 | INFO     | -- intersect: -3860068008.3800416
[2025-05-25 13:28:48] 2025-05-25 11:28:26,014 | INFO     | intersect: -3860068008.3800416
[2025-05-25 13:28:48] 2025-05-25 11:28:26,014 | INFO     | chi2: 0.0006523777941652461
[2025-05-25 13:28:48] 2025-05-25 11:28:26,014 | INFO     | current chi2=0.0006523777941652461 (change=84.01965694990116 %)
[2025-05-25 13:28:48] 2025-05-25 11:28:26,014 | INFO     | sum of square deviations: 2194675568.0
[2025-05-25 13:28:48] 2025-05-25 11:28:26,016 | INFO     | sum of deviations: 4948656720.0
[2025-05-25 13:28:48] 2025-05-25 11:28:26,016 | INFO     | mean x: 1748166604.5
[2025-05-25 13:28:48] 2025-05-25 11:28:26,016 | INFO     | mean y: 2333872.25
[2025-05-25 13:28:48] 2025-05-25 11:28:26,016 | INFO     | -- intersect: -3939513634.132095
[2025-05-25 13:28:48] 2025-05-25 11:28:26,016 | INFO     | intersect: -3939513634.132095
[2025-05-25 13:28:48] 2025-05-25 11:28:26,016 | INFO     | chi2: 0.0006291421586219408
[2025-05-25 13:28:48] 2025-05-25 11:28:26,016 | INFO     | current chi2=0.0006291421586219408 (change=3.5616840044404934 %)
[2025-05-25 13:28:48] 2025-05-25 11:28:26,016 | INFO     | left removable region: 40
[2025-05-25 13:28:48] 2025-05-25 11:28:26,017 | INFO     | sum of square deviations: 1418361477.5
[2025-05-25 13:28:48] 2025-05-25 11:28:26,018 | INFO     | sum of deviations: 2680756934.9999995
[2025-05-25 13:28:48] 2025-05-25 11:28:26,018 | INFO     | mean x: 1748167031.5
[2025-05-25 13:28:48] 2025-05-25 11:28:26,018 | INFO     | mean y: 2335765.5421686745
[2025-05-25 13:28:48] 2025-05-25 11:28:26,018 | INFO     | -- intersect: -3301766163.038296
[2025-05-25 13:28:48] 2025-05-25 11:28:26,018 | INFO     | intersect: -3301766163.038296
[2025-05-25 13:28:48] 2025-05-25 11:28:26,018 | INFO     | chi2: 0.0001760060170986469
[2025-05-25 13:28:48] 2025-05-25 11:28:26,018 | INFO     | -- intersect: -3301766163.038296
[2025-05-25 13:28:48] 2025-05-25 11:28:26,019 | INFO     | current memory leak: 1.89 B/s (using 166 data points, chi2=0.00)
[2025-05-25 13:28:48] 2025-05-25 11:28:26,019 | INFO     | ..............................
[2025-05-25 13:28:48] 2025-05-25 11:28:26,019 | INFO     | . Timing measurements:
[2025-05-25 13:28:48] 2025-05-25 11:28:26,019 | INFO     | . get job = 0 s
[2025-05-25 13:28:48] 2025-05-25 11:28:26,020 | INFO     | . initial setup = 1 s
[2025-05-25 13:28:48] 2025-05-25 11:28:26,020 | INFO     | . payload setup = 10 s
[2025-05-25 13:28:48] 2025-05-25 11:28:26,020 | INFO     | . stage-in = 0 s
[2025-05-25 13:28:48] 2025-05-25 11:28:26,020 | INFO     | . payload execution = 12937 s
[2025-05-25 13:28:48] 2025-05-25 11:28:26,020 | INFO     | . stage-out = 1 s
[2025-05-25 13:28:48] 2025-05-25 11:28:26,020 | INFO     | . log creation = 0 s
[2025-05-25 13:28:48] 2025-05-25 11:28:26,020 | INFO     | ..............................
[2025-05-25 13:28:48] 2025-05-25 11:28:26,122 | INFO     | 
[2025-05-25 13:28:48] 2025-05-25 11:28:26,123 | INFO     | job summary report
[2025-05-25 13:28:48] 2025-05-25 11:28:26,123 | INFO     | --------------------------------------------------
[2025-05-25 13:28:48] 2025-05-25 11:28:26,123 | INFO     | PanDA job id: 6665150379
[2025-05-25 13:28:48] 2025-05-25 11:28:26,123 | INFO     | task id: 44871837
[2025-05-25 13:28:48] 2025-05-25 11:28:26,123 | INFO     | errors: (none)
[2025-05-25 13:28:48] 2025-05-25 11:28:26,123 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 13:28:48] 2025-05-25 11:28:26,123 | INFO     | pilot state: finished 
[2025-05-25 13:28:48] 2025-05-25 11:28:26,124 | INFO     | transexitcode: 0
[2025-05-25 13:28:48] 2025-05-25 11:28:26,124 | INFO     | exeerrorcode: 0
[2025-05-25 13:28:48] 2025-05-25 11:28:26,124 | INFO     | exeerrordiag: 
[2025-05-25 13:28:48] 2025-05-25 11:28:26,124 | INFO     | exitcode: 0
[2025-05-25 13:28:48] 2025-05-25 11:28:26,124 | INFO     | exitmsg: OK
[2025-05-25 13:28:48] 2025-05-25 11:28:26,124 | INFO     | cpuconsumptiontime: 47786 s
[2025-05-25 13:28:48] 2025-05-25 11:28:26,124 | INFO     | nevents: 400
[2025-05-25 13:28:48] 2025-05-25 11:28:26,124 | INFO     | neventsw: 0
[2025-05-25 13:28:48] 2025-05-25 11:28:26,124 | INFO     | pid: 3675530
[2025-05-25 13:28:48] 2025-05-25 11:28:26,124 | INFO     | pgrp: 3675530
[2025-05-25 13:28:48] 2025-05-25 11:28:26,124 | INFO     | corecount: 4
[2025-05-25 13:28:48] 2025-05-25 11:28:26,124 | INFO     | event service: False
[2025-05-25 13:28:48] 2025-05-25 11:28:26,125 | INFO     | sizes: {0: 2393575, 1: 2393774, 8: 2393980, 12: 2394008, 12951: 2424368, 12952: 2424367, 12954: 2433514, 12957: 2433570, 12966: 2433740}
[2025-05-25 13:28:48] 2025-05-25 11:28:26,125 | INFO     | --------------------------------------------------
[2025-05-25 13:28:48] 2025-05-25 11:28:26,125 | INFO     | 
[2025-05-25 13:28:48] 2025-05-25 11:28:26,125 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-05-25 13:28:48] 2025-05-25 11:28:26,154 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 13:28:48] 2025-05-25 11:28:26,154 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 13:28:48] 2025-05-25 11:28:26,155 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 13:28:48] 2025-05-25 11:28:26,155 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 13:28:48] 2025-05-25 11:28:26,155 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 13:28:48] 2025-05-25 11:28:26,155 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 13:28:48] 2025-05-25 11:28:26,155 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 13:28:48] 2025-05-25 11:28:26,155 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 13:28:48] 2025-05-25 11:28:26,155 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 13:28:48] 2025-05-25 11:28:26,155 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 13:28:48] 2025-05-25 11:28:26,155 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 13:28:48] 2025-05-25 11:28:26,155 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 13:28:48] 2025-05-25 11:28:26,155 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 13:28:48] 2025-05-25 11:28:26,156 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 13:28:48] 2025-05-25 11:28:26,156 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 13:28:48] 2025-05-25 11:28:26,156 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 13:28:48] 2025-05-25 11:28:26,156 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 13:28:48] 2025-05-25 11:28:26,156 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 13:28:48] 2025-05-25 11:28:26,156 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 13:28:48] 2025-05-25 11:28:26,156 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 13:28:48] 2025-05-25 11:28:26,156 | INFO     | job 6665150379 has completed (purged errors)
[2025-05-25 13:28:48] 2025-05-25 11:28:26,156 | INFO     | overall cleanup function is called
[2025-05-25 13:28:48] 2025-05-25 11:28:26,459 | INFO     | 12985s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-25 13:28:48] 2025-05-25 11:28:27,165 | INFO     | --- collectZombieJob: --- 10, [3675530]
[2025-05-25 13:28:48] 2025-05-25 11:28:27,166 | INFO     | zombie collector waiting for pid 3675530
[2025-05-25 13:28:48] 2025-05-25 11:28:27,166 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 13:28:48] 2025-05-25 11:28:27,166 | INFO     | collected zombie processes
[2025-05-25 13:28:48] 2025-05-25 11:28:27,166 | INFO     | will attempt to kill all subprocesses of pid=3675530
[2025-05-25 13:28:48] 2025-05-25 11:28:28,862 | INFO     | process IDs to be killed: [3675530] (in reverse order)
[2025-05-25 13:28:48] 2025-05-25 11:28:29,004 | INFO     | PID=3661935 has CPU usage=22.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-05-25 13:28:48] 2025-05-25 11:28:29,005 | INFO     | .. there are 30 such processes running
[2025-05-25 13:28:48] 2025-05-25 11:28:29,157 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 13:28:48] 2025-05-25 11:28:29,157 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 13:28:48] 2025-05-25 11:28:29,181 | INFO     | did not find any defunct processes belonging to 3675530
[2025-05-25 13:28:48] 2025-05-25 11:28:29,200 | INFO     | did not find any defunct processes belonging to 3675530
[2025-05-25 13:28:48] 2025-05-25 11:28:29,200 | INFO     | ready for new job
[2025-05-25 13:28:48] 2025-05-25 11:28:29,200 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 13:28:48] 2025-05-25 11:28:29,202 | INFO     | **************************************
[2025-05-25 13:28:48] 2025-05-25 11:28:29,202 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 13:28:48] 2025-05-25 11:28:29,202 | INFO     | **************************************
[2025-05-25 13:28:48] 2025-05-25 11:28:29,202 | INFO     | 
[2025-05-25 13:28:48] 2025-05-25 11:28:29,211 | INFO     | architecture information:
[2025-05-25 13:28:48] 2025-05-25 11:28:29,211 | INFO     | executing command: cat /etc/os-release
[2025-05-25 13:28:48] 2025-05-25 11:28:29,234 | INFO     | cat /etc/os-release:
[2025-05-25 13:28:48] NAME="CentOS Linux"
[2025-05-25 13:28:48] VERSION="7 (Core)"
[2025-05-25 13:28:48] ID="centos"
[2025-05-25 13:28:48] ID_LIKE="rhel fedora"
[2025-05-25 13:28:48] VERSION_ID="7"
[2025-05-25 13:28:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 13:28:48] ANSI_COLOR="0;31"
[2025-05-25 13:28:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 13:28:48] HOME_URL="https://www.centos.org/"
[2025-05-25 13:28:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 13:28:48] 
[2025-05-25 13:28:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 13:28:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 13:28:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 13:28:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 13:28:48] 
[2025-05-25 13:28:48] 2025-05-25 11:28:29,234 | INFO     | **************************************
[2025-05-25 13:28:48] 2025-05-25 11:28:29,737 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-05-25 13:28:48] 2025-05-25 11:28:29,759 | INFO     | sufficient remaining disk space (3303498842112 B)
[2025-05-25 13:28:48] 2025-05-25 11:28:29,760 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 13:28:48] 2025-05-25 11:28:29,760 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 13:28:48] 2025-05-25 11:28:29,760 | INFO     | update_server=False
[2025-05-25 13:28:48] 2025-05-25 11:28:29,760 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 13:28:48] 2025-05-25 11:28:29,761 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 13:28:48] 2025-05-25 11:28:29,761 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 13:28:48] 2025-05-25 11:28:29,761 | INFO     | aborting loop
[2025-05-25 13:28:48] 2025-05-25 11:28:29,761 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 13:28:48] 2025-05-25 11:28:29,762 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 13:28:48] 2025-05-25 11:28:29,762 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 13:28:48] 2025-05-25 11:28:29,894 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 13:28:48] 2025-05-25 11:28:30,199 | INFO     | all payload control threads have been joined
[2025-05-25 13:28:48] 2025-05-25 11:28:30,293 | INFO     | all data control threads have been joined
[2025-05-25 13:28:48] 2025-05-25 11:28:30,766 | INFO     | [job] retrieve thread has finished
[2025-05-25 13:28:48] 2025-05-25 11:28:30,767 | INFO     | [job] job monitor thread has finished
[2025-05-25 13:28:48] 2025-05-25 11:28:30,769 | INFO     | [payload] validate_post thread has finished
[2025-05-25 13:28:48] 2025-05-25 11:28:30,890 | INFO     | all job control threads have been joined
[2025-05-25 13:28:48] 2025-05-25 11:28:31,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 13:28:48] 2025-05-25 11:28:31,205 | INFO     | [payload] control thread has finished
[2025-05-25 13:28:48] 2025-05-25 11:28:31,272 | INFO     | [data] copytool_in thread has finished
[2025-05-25 13:28:48] 2025-05-25 11:28:31,299 | INFO     | [data] control thread has finished
[2025-05-25 13:28:48] 2025-05-25 11:28:31,463 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 13:28:48] 2025-05-25 11:28:31,544 | INFO     | [job] validate thread has finished
[2025-05-25 13:28:48] 2025-05-25 11:28:31,821 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 13:28:48] 2025-05-25 11:28:31,896 | INFO     | [job] control thread has finished
[2025-05-25 13:28:48] 2025-05-25 11:28:31,900 | INFO     | [data] copytool_out thread has finished
[2025-05-25 13:28:48] 2025-05-25 11:28:31,938 | INFO     | [payload] failed_post thread has finished
[2025-05-25 13:28:48] 2025-05-25 11:28:31,939 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 13:28:48] 2025-05-25 11:28:32,123 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 13:28:48] 2025-05-25 11:28:32,139 | INFO     | [job] queue monitor thread has finished
[2025-05-25 13:28:48] 2025-05-25 11:28:36,129 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 13:28:48] 2025-05-25 11:28:40,123 | INFO     | job.realtimelogging is not enabled
[2025-05-25 13:28:48] 2025-05-25 11:28:41,128 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 13:28:48] 2025-05-25 11:28:42,743 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23311162021696)>', '<ExcThread(monitor, started 23310853179136)>']
[2025-05-25 13:28:48] 2025-05-25 11:28:42,826 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 13:28:48] 2025-05-25 11:28:42,827 | INFO     | [monitor] control thread has ended
[2025-05-25 13:28:48] 2025-05-25 11:28:47,768 | INFO     | all workflow threads have been joined
[2025-05-25 13:28:48] 2025-05-25 11:28:47,769 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 13:28:48] 2025-05-25 11:28:47,769 | INFO     | traces error code: 0
[2025-05-25 13:28:48] 2025-05-25 11:28:47,769 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 13:28:48] 2025-05-25 11:28:47,911 [wrapper] ==== pilot stdout END ====
[2025-05-25 13:28:48] 2025-05-25 11:28:47,915 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 13:28:48] 2025-05-25 11:28:47,919 [wrapper] pilotpid: 3661935
[2025-05-25 13:28:48] 2025-05-25 11:28:47,922 [wrapper] Pilot exit status: 0
[2025-05-25 13:28:48] 2025-05-25 11:28:47,937 [wrapper] pandaids: 6665150379
[2025-05-25 13:28:48] 2025-05-25 11:28:48,084 [wrapper] cleanup supervisor_pilot  603477 3661936
[2025-05-25 13:28:48] 2025-05-25 11:28:48,089 [wrapper] Test setup, not cleaning
[2025-05-25 13:28:48] 2025-05-25 11:28:48,093 [wrapper] apfmon messages muted
[2025-05-25 13:28:48] 2025-05-25 11:28:48,097 [wrapper] ==== wrapper stdout END ====
[2025-05-25 13:28:48] 2025-05-25 11:28:48,101 [wrapper] ==== wrapper stderr END ====
[2025-05-25 13:28:48]  *** Error codes and diagnostics ***
[2025-05-25 13:28:48]     "exeErrorCode": 0,
[2025-05-25 13:28:48]     "exeErrorDiag": "",
[2025-05-25 13:28:48]     "pilotErrorCode": 0,
[2025-05-25 13:28:48]     "pilotErrorDiag": "",
[2025-05-25 13:28:48]  *** Listing of results directory ***
[2025-05-25 13:28:48] total 415112
[2025-05-25 13:28:48] -rw-r--r-- 1 boinc boinc    495897 May 24 06:11 pilot3.tar.gz
[2025-05-25 13:28:48] -rw-r--r-- 1 boinc boinc      5111 May 24 06:17 queuedata.json
[2025-05-25 13:28:48] -rwx------ 1 boinc boinc     37140 May 24 06:17 runpilot2-wrapper.sh
[2025-05-25 13:28:48] -rw-r--r-- 1 boinc boinc       100 May 25 09:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 13:28:48] -rwxr-xr-x 1 boinc boinc      7986 May 25 09:51 run_atlas
[2025-05-25 13:28:48] -rw-r--r-- 1 boinc boinc       105 May 25 09:51 job.xml
[2025-05-25 13:28:48] -rw-r--r-- 2 boinc boinc 222757946 May 25 09:51 EVNT.44871834._000107.pool.root.1
[2025-05-25 13:28:48] -rw-r--r-- 1 boinc boinc      6674 May 25 09:51 init_data.xml
[2025-05-25 13:28:48] -rw-r--r-- 2 boinc boinc     15093 May 25 09:51 start_atlas.sh
[2025-05-25 13:28:48] drwxrwx--x 2 boinc boinc      4096 May 25 09:51 shared
[2025-05-25 13:28:48] -rw-r--r-- 2 boinc boinc    508876 May 25 09:51 input.tar.gz
[2025-05-25 13:28:48] -rw-r--r-- 1 boinc boinc         0 May 25 09:51 boinc_lockfile
[2025-05-25 13:28:48] -rw-r--r-- 1 boinc boinc      2556 May 25 09:51 pandaJob.out
[2025-05-25 13:28:48] -rw------- 1 boinc boinc    990811 May 25 09:52 agis_schedconf.cvmfs.json
[2025-05-25 13:28:48] drwx------ 4 boinc boinc      4096 May 25 09:52 pilot3
[2025-05-25 13:28:48] -rw------- 1 boinc boinc 195452475 May 25 13:27 HITS.44871837._002669.pool.root.1
[2025-05-25 13:28:48] -rw-r--r-- 1 boinc boinc       531 May 25 13:27 boinc_task_state.xml
[2025-05-25 13:28:48] -rw------- 1 boinc boinc        95 May 25 13:28 pilot_heartbeat.json
[2025-05-25 13:28:48] -rw------- 1 boinc boinc      1027 May 25 13:28 memory_monitor_summary.json
[2025-05-25 13:28:48] -rw------- 1 boinc boinc   1596740 May 25 13:28 agis_ddmendpoints.agis.ALL.json
[2025-05-25 13:28:48] -rw------- 1 boinc boinc    331797 May 25 13:28 log.44871837._002669.job.log.tgz.1
[2025-05-25 13:28:48] -rw------- 1 boinc boinc      7692 May 25 13:28 heartbeat.json
[2025-05-25 13:28:48] -rw-r--r-- 1 boinc boinc      8192 May 25 13:28 boinc_mmap_file
[2025-05-25 13:28:48] -rw-r--r-- 1 boinc boinc        28 May 25 13:28 wrapper_checkpoint.txt
[2025-05-25 13:28:48] -rw------- 1 boinc boinc      4559 May 25 13:28 pilotlog.txt
[2025-05-25 13:28:48] -rw------- 1 boinc boinc   1185532 May 25 13:28 log.44871837._002669.job.log.1
[2025-05-25 13:28:48] -rw------- 1 boinc boinc       357 May 25 13:28 output.list
[2025-05-25 13:28:48] -rw-r--r-- 1 boinc boinc       620 May 25 13:28 runtime_log
[2025-05-25 13:28:48] -rw------- 1 boinc boinc   1536000 May 25 13:28 result.tar.gz
[2025-05-25 13:28:48] -rw-r--r-- 1 boinc boinc      9026 May 25 13:28 runtime_log.err
[2025-05-25 13:28:48] -rw------- 1 boinc boinc       666 May 25 13:28 dlgLDmSVvc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmv7KKDmqY24Po.diag
[2025-05-25 13:28:48] -rw-r--r-- 1 boinc boinc     20769 May 25 13:28 stderr.txt
[2025-05-25 13:28:48] HITS file was successfully produced:
[2025-05-25 13:28:48] -rw------- 1 boinc boinc 195452475 May 25 13:27 shared/HITS.pool.root.1
[2025-05-25 13:28:48]  *** Contents of shared directory: ***
[2025-05-25 13:28:48] total 410432
[2025-05-25 13:28:48] -rw-r--r-- 2 boinc boinc 222757946 May 25 09:51 ATLAS.root_0
[2025-05-25 13:28:48] -rw-r--r-- 2 boinc boinc     15093 May 25 09:51 start_atlas.sh
[2025-05-25 13:28:48] -rw-r--r-- 2 boinc boinc    508876 May 25 09:51 input.tar.gz
[2025-05-25 13:28:48] -rw------- 1 boinc boinc 195452475 May 25 13:27 HITS.pool.root.1
[2025-05-25 13:28:48] -rw------- 1 boinc boinc   1536000 May 25 13:28 result.tar.gz
13:28:49 (3657420): run_atlas exited; CPU time 48526.388528
13:28:49 (3657420): called boinc_finish(0)

</stderr_txt>
]]>

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