Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:06:40 (358001): wrapper (7.7.26015): starting
11:06:40 (358001): wrapper: running run_atlas (--nthreads 4)
[2025-05-24 11:06:40] Arguments: --nthreads 4
[2025-05-24 11:06:40] Threads: 4
[2025-05-24 11:06:40] Checking for CVMFS
[2025-05-24 11:06:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 11:06:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 11:06:41] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 11:06:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 11:06:41] 2.9.2.0 297817 193 57392 146360 2 56 27157740 36864001 0 130560 0 144426 99.971 75709 15842 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-24 11:06:41] CVMFS is ok
[2025-05-24 11:06:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 11:06:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 11:06:41] Further information can be found at the LHC@home message board.
[2025-05-24 11:06:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 11:06:41] Checking for apptainer binary...
[2025-05-24 11:06:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 11:06:41] Running /usr/bin/apptainer --version
[2025-05-24 11:06:41] apptainer version 1.3.6-6.1
[2025-05-24 11:06:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 11:06:41] atlasA237
[2025-05-24 11:06:41] apptainer works
[2025-05-24 11:06:41] Set ATHENA_PROC_NUMBER=4
[2025-05-24 11:06:41] Set ATHENA_CORE_NUMBER=4
[2025-05-24 11:06:41] Starting ATLAS job with PandaID=6665150322
[2025-05-24 11:06:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 12:40:27]  *** The last 200 lines of the pilot log: ***
[2025-05-24 12:40:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-24 12:40:27]  is_altstaged=None
[2025-05-24 12:40:27]  is_tar=False
[2025-05-24 12:40:27]  lfn=log.44871837._002612.job.log.tgz.1
[2025-05-24 12:40:27]  mtime=0
[2025-05-24 12:40:27]  protocol_id=None
[2025-05-24 12:40:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-24 12:40:27]  replicas=None
[2025-05-24 12:40:27]  scope=mc23_13p6TeV
[2025-05-24 12:40:27]  status=None
[2025-05-24 12:40:27]  status_code=0
[2025-05-24 12:40:27]  storage_token=
[2025-05-24 12:40:27]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6665150322/log.44871837._002612.job.log.tgz.1
[2025-05-24 12:40:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/72/log.44871837._002612.job.log.tgz.1
[2025-05-24 12:40:27]  workdir=None
[2025-05-24 12:40:27] ]
[2025-05-24 12:40:27] 2025-05-24 10:40:03,105 | INFO     | transferring file log.44871837._002612.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6665150322/log.44871837._002612.job.log.tgz.1 to /local/data/boinc/
[2025-05-24 12:40:27] 2025-05-24 10:40:03,105 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6665150322/log.44871837._002612.job.log.tgz.1 /local/data/boinc/slots/0/log.44871837._0026
[2025-05-24 12:40:27] 2025-05-24 10:40:03,125 | INFO     | adding to output.list: log.44871837._002612.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/72/log.44871837._002612.job.log.tg
[2025-05-24 12:40:27] 2025-05-24 10:40:03,125 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-24 12:40:27] 2025-05-24 10:40:03,125 | INFO     | summary of transferred files:
[2025-05-24 12:40:27] 2025-05-24 10:40:03,125 | INFO     |  -- lfn=log.44871837._002612.job.log.tgz.1, status_code=0, status=transferred
[2025-05-24 12:40:27] 2025-05-24 10:40:03,125 | INFO     | stage-out finished correctly
[2025-05-24 12:40:27] 2025-05-24 10:40:03,165 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-24 12:40:27] 2025-05-24 10:40:03,286 | INFO     | monitor loop #426: job 0:6665150322 is in state 'finished'
[2025-05-24 12:40:27] 2025-05-24 10:40:03,287 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 12:40:27] 2025-05-24 10:40:05,567 | INFO     | job 6665150322 has state=finished
[2025-05-24 12:40:27] 2025-05-24 10:40:05,567 | INFO     | preparing for final server update for job 6665150322 in state='finished'
[2025-05-24 12:40:27] 2025-05-24 10:40:05,567 | INFO     | this job has now completed (state=finished)
[2025-05-24 12:40:27] 2025-05-24 10:40:05,567 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-24 12:40:27] 2025-05-24 10:40:05,567 | INFO     | log transfer has been attempted: DONE
[2025-05-24 12:40:27] 2025-05-24 10:40:05,567 | INFO     | job 6665150322 has finished - writing final server update
[2025-05-24 12:40:27] 2025-05-24 10:40:05,567 | INFO     | total number of processed events: 400 (read)
[2025-05-24 12:40:27] 2025-05-24 10:40:05,568 | INFO     | executing command: lscpu
[2025-05-24 12:40:27] 2025-05-24 10:40:05,589 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-24 12:40:27] 2025-05-24 10:40:05,790 | INFO     | monitor loop #427: job 0:6665150322 is in state 'finished'
[2025-05-24 12:40:27] 2025-05-24 10:40:05,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 12:40:27] 2025-05-24 10:40:08,292 | INFO     | monitor loop #428: job 0:6665150322 is in state 'finished'
[2025-05-24 12:40:27] 2025-05-24 10:40:08,293 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 12:40:27] 2025-05-24 10:40:08,874 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-24 12:40:27] 2025-05-24 10:40:08,874 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6665150322/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 12:40:27] 2025-05-24 10:40:08,874 | INFO     | extracted standard info from prmon json
[2025-05-24 12:40:27] 2025-05-24 10:40:08,875 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 12:40:27] 2025-05-24 10:40:08,875 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 12:40:27] 2025-05-24 10:40:08,875 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 12:40:27] 2025-05-24 10:40:08,875 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 12:40:27] 2025-05-24 10:40:08,876 | INFO     | fitting pss+swap vs Time
[2025-05-24 12:40:27] 2025-05-24 10:40:08,876 | INFO     | sum of square deviations: 190403570.0
[2025-05-24 12:40:27] 2025-05-24 10:40:08,877 | INFO     | sum of deviations: -8457629016.000001
[2025-05-24 12:40:27] 2025-05-24 10:40:08,877 | INFO     | mean x: 1748080499.0
[2025-05-24 12:40:27] 2025-05-24 10:40:08,877 | INFO     | mean y: 2435546.717647059
[2025-05-24 12:40:27] 2025-05-24 10:40:08,877 | INFO     | -- intersect: 77651275590.24289
[2025-05-24 12:40:27] 2025-05-24 10:40:08,877 | INFO     | intersect: 77651275590.24289
[2025-05-24 12:40:27] 2025-05-24 10:40:08,877 | INFO     | chi2: 0.14106628262416923
[2025-05-24 12:40:27] 2025-05-24 10:40:08,877 | INFO     | -- intersect: 77651275590.24289
[2025-05-24 12:40:27] 2025-05-24 10:40:08,877 | INFO     | current memory leak: -44.42 B/s (using 85 data points, chi2=0.14)
[2025-05-24 12:40:27] 2025-05-24 10:40:08,877 | INFO     | ..............................
[2025-05-24 12:40:27] 2025-05-24 10:40:08,877 | INFO     | . Timing measurements:
[2025-05-24 12:40:27] 2025-05-24 10:40:08,877 | INFO     | . get job = 0 s
[2025-05-24 12:40:27] 2025-05-24 10:40:08,877 | INFO     | . initial setup = 1 s
[2025-05-24 12:40:27] 2025-05-24 10:40:08,877 | INFO     | . payload setup = 4 s
[2025-05-24 12:40:27] 2025-05-24 10:40:08,878 | INFO     | . stage-in = 0 s
[2025-05-24 12:40:27] 2025-05-24 10:40:08,878 | INFO     | . payload execution = 5571 s
[2025-05-24 12:40:27] 2025-05-24 10:40:08,878 | INFO     | . stage-out = 0 s
[2025-05-24 12:40:27] 2025-05-24 10:40:08,878 | INFO     | . log creation = 0 s
[2025-05-24 12:40:27] 2025-05-24 10:40:08,878 | INFO     | ..............................
[2025-05-24 12:40:27] 2025-05-24 10:40:09,281 | INFO     | 
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | job summary report
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | --------------------------------------------------
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | PanDA job id: 6665150322
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | task id: 44871837
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | errors: (none)
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | pilot state: finished 
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | transexitcode: 0
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | exeerrorcode: 0
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | exeerrordiag: 
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | exitcode: 0
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | exitmsg: OK
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | cpuconsumptiontime: 21078 s
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | nevents: 400
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | neventsw: 0
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | pid: 368347
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | pgrp: 368347
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | corecount: 4
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | event service: False
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | sizes: {0: 2393738, 3: 2393944, 10: 2393972, 5580: 2429553, 5586: 2429667}
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | --------------------------------------------------
[2025-05-24 12:40:27] 2025-05-24 10:40:09,282 | INFO     | 
[2025-05-24 12:40:27] 2025-05-24 10:40:09,283 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-24 12:40:27] 2025-05-24 10:40:09,300 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | job 6665150322 has completed (purged errors)
[2025-05-24 12:40:27] 2025-05-24 10:40:09,301 | INFO     | overall cleanup function is called
[2025-05-24 12:40:27] 2025-05-24 10:40:10,308 | INFO     | --- collectZombieJob: --- 10, [368347]
[2025-05-24 12:40:27] 2025-05-24 10:40:10,308 | INFO     | zombie collector waiting for pid 368347
[2025-05-24 12:40:27] 2025-05-24 10:40:10,308 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 12:40:27] 2025-05-24 10:40:10,308 | INFO     | collected zombie processes
[2025-05-24 12:40:27] 2025-05-24 10:40:10,308 | INFO     | will attempt to kill all subprocesses of pid=368347
[2025-05-24 12:40:27] 2025-05-24 10:40:10,373 | INFO     | process IDs to be killed: [368347] (in reverse order)
[2025-05-24 12:40:27] 2025-05-24 10:40:10,413 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 12:40:27] 2025-05-24 10:40:10,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 12:40:27] 2025-05-24 10:40:10,416 | INFO     | did not find any defunct processes belonging to 368347
[2025-05-24 12:40:27] 2025-05-24 10:40:10,419 | INFO     | did not find any defunct processes belonging to 368347
[2025-05-24 12:40:27] 2025-05-24 10:40:10,419 | INFO     | ready for new job
[2025-05-24 12:40:27] 2025-05-24 10:40:10,419 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 12:40:27] 2025-05-24 10:40:10,420 | INFO     | **************************************
[2025-05-24 12:40:27] 2025-05-24 10:40:10,420 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 12:40:27] 2025-05-24 10:40:10,420 | INFO     | **************************************
[2025-05-24 12:40:27] 2025-05-24 10:40:10,420 | INFO     | 
[2025-05-24 12:40:27] 2025-05-24 10:40:10,420 | INFO     | architecture information:
[2025-05-24 12:40:27] 2025-05-24 10:40:10,420 | INFO     | executing command: cat /etc/os-release
[2025-05-24 12:40:27] 2025-05-24 10:40:10,434 | INFO     | cat /etc/os-release:
[2025-05-24 12:40:27] NAME="CentOS Linux"
[2025-05-24 12:40:27] VERSION="7 (Core)"
[2025-05-24 12:40:27] ID="centos"
[2025-05-24 12:40:27] ID_LIKE="rhel fedora"
[2025-05-24 12:40:27] VERSION_ID="7"
[2025-05-24 12:40:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 12:40:27] ANSI_COLOR="0;31"
[2025-05-24 12:40:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 12:40:27] HOME_URL="https://www.centos.org/"
[2025-05-24 12:40:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 12:40:27] 
[2025-05-24 12:40:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 12:40:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 12:40:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 12:40:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 12:40:27] 
[2025-05-24 12:40:27] 2025-05-24 10:40:10,434 | INFO     | **************************************
[2025-05-24 12:40:27] 2025-05-24 10:40:10,937 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-24 12:40:27] 2025-05-24 10:40:10,952 | INFO     | sufficient remaining disk space (329254961152 B)
[2025-05-24 12:40:27] 2025-05-24 10:40:10,952 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 12:40:27] 2025-05-24 10:40:10,952 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 12:40:27] 2025-05-24 10:40:10,952 | INFO     | update_server=False
[2025-05-24 12:40:27] 2025-05-24 10:40:10,952 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 12:40:27] 2025-05-24 10:40:11,178 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 12:40:27] 2025-05-24 10:40:11,442 | INFO     | all data control threads have been joined
[2025-05-24 12:40:27] 2025-05-24 10:40:11,533 | INFO     | PID=361705 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-24 12:40:27] 2025-05-24 10:40:11,534 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 12:40:27] 2025-05-24 10:40:11,534 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 12:40:27] 2025-05-24 10:40:11,534 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 12:40:27] 2025-05-24 10:40:11,688 | INFO     | all job control threads have been joined
[2025-05-24 12:40:27] 2025-05-24 10:40:11,801 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 12:40:27] 2025-05-24 10:40:11,801 | INFO     | aborting loop
[2025-05-24 12:40:27] 2025-05-24 10:40:11,958 | INFO     | [job] retrieve thread has finished
[2025-05-24 12:40:27] 2025-05-24 10:40:12,098 | INFO     | all payload control threads have been joined
[2025-05-24 12:40:27] 2025-05-24 10:40:12,287 | INFO     | [data] copytool_in thread has finished
[2025-05-24 12:40:27] 2025-05-24 10:40:12,447 | INFO     | [data] control thread has finished
[2025-05-24 12:40:27] 2025-05-24 10:40:12,542 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 12:40:27] 2025-05-24 10:40:12,694 | INFO     | [job] control thread has finished
[2025-05-24 12:40:27] 2025-05-24 10:40:12,745 | INFO     | [payload] failed_post thread has finished
[2025-05-24 12:40:27] 2025-05-24 10:40:12,806 | INFO     | [job] job monitor thread has finished
[2025-05-24 12:40:27] 2025-05-24 10:40:13,103 | INFO     | [payload] control thread has finished
[2025-05-24 12:40:27] 2025-05-24 10:40:13,182 | INFO     | [data] copytool_out thread has finished
[2025-05-24 12:40:27] 2025-05-24 10:40:13,286 | INFO     | [job] validate thread has finished
[2025-05-24 12:40:27] 2025-05-24 10:40:13,323 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 12:40:27] 2025-05-24 10:40:13,366 | INFO     | [payload] validate_post thread has finished
[2025-05-24 12:40:27] 2025-05-24 10:40:13,395 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 12:40:27] 2025-05-24 10:40:13,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 12:40:27] 2025-05-24 10:40:13,928 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 12:40:27] 2025-05-24 10:40:14,933 | INFO     | [job] queue monitor thread has finished
[2025-05-24 12:40:27] 2025-05-24 10:40:17,716 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 12:40:27] 2025-05-24 10:40:21,631 | INFO     | job.realtimelogging is not enabled
[2025-05-24 12:40:27] 2025-05-24 10:40:22,635 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 12:40:27] 2025-05-24 10:40:22,761 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140287473043264)>', '<ExcThread(monitor, started 140286307067648)>']
[2025-05-24 12:40:27] 2025-05-24 10:40:23,589 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 12:40:27] 2025-05-24 10:40:23,589 | INFO     | [monitor] control thread has ended
[2025-05-24 12:40:27] 2025-05-24 10:40:27,786 | INFO     | all workflow threads have been joined
[2025-05-24 12:40:27] 2025-05-24 10:40:27,787 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 12:40:27] 2025-05-24 10:40:27,787 | INFO     | traces error code: 0
[2025-05-24 12:40:27] 2025-05-24 10:40:27,787 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 12:40:27] 2025-05-24 10:40:27,858 [wrapper] ==== pilot stdout END ====
[2025-05-24 12:40:27] 2025-05-24 10:40:27,862 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 12:40:27] 2025-05-24 10:40:27,865 [wrapper] pilotpid: 361705
[2025-05-24 12:40:27] 2025-05-24 10:40:27,869 [wrapper] Pilot exit status: 0
[2025-05-24 12:40:27] 2025-05-24 10:40:27,880 [wrapper] pandaids: 6665150322
[2025-05-24 12:40:27] 2025-05-24 10:40:27,906 [wrapper] cleanup supervisor_pilot  383223 361706
[2025-05-24 12:40:27] 2025-05-24 10:40:27,910 [wrapper] Test setup, not cleaning
[2025-05-24 12:40:27] 2025-05-24 10:40:27,914 [wrapper] apfmon messages muted
[2025-05-24 12:40:27] 2025-05-24 10:40:27,917 [wrapper] ==== wrapper stdout END ====
[2025-05-24 12:40:27] 2025-05-24 10:40:27,921 [wrapper] ==== wrapper stderr END ====
[2025-05-24 12:40:27]  *** Error codes and diagnostics ***
[2025-05-24 12:40:27]     "exeErrorCode": 0,
[2025-05-24 12:40:27]     "exeErrorDiag": "",
[2025-05-24 12:40:27]     "pilotErrorCode": 0,
[2025-05-24 12:40:27]     "pilotErrorDiag": "",
[2025-05-24 12:40:27]  *** Listing of results directory ***
[2025-05-24 12:40:27] total 414696
[2025-05-24 12:40:27] -rw-r--r-- 1 boinc boinc    495897 May 24 06:11 pilot3.tar.gz
[2025-05-24 12:40:27] -rwx------ 1 boinc boinc     37140 May 24 06:17 runpilot2-wrapper.sh
[2025-05-24 12:40:27] -rw-r--r-- 1 boinc boinc      5111 May 24 06:17 queuedata.json
[2025-05-24 12:40:27] -rw-r--r-- 1 boinc boinc       100 May 24 11:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 12:40:27] -rwxr-xr-x 1 boinc boinc      7986 May 24 11:06 run_atlas
[2025-05-24 12:40:27] -rw-r--r-- 1 boinc boinc       105 May 24 11:06 job.xml
[2025-05-24 12:40:27] -rw-r--r-- 2 boinc boinc 222762483 May 24 11:06 EVNT.44871834._000105.pool.root.1
[2025-05-24 12:40:27] -rw-r--r-- 1 boinc boinc      6855 May 24 11:06 init_data.xml
[2025-05-24 12:40:27] drwxrwx--x 2 boinc boinc      4096 May 24 11:06 shared
[2025-05-24 12:40:27] -rw-r--r-- 2 boinc boinc    508869 May 24 11:06 input.tar.gz
[2025-05-24 12:40:27] -rw-r--r-- 2 boinc boinc     15093 May 24 11:06 start_atlas.sh
[2025-05-24 12:40:27] -rw-r--r-- 1 boinc boinc         0 May 24 11:06 boinc_lockfile
[2025-05-24 12:40:27] -rw-r--r-- 1 boinc boinc      2556 May 24 11:06 pandaJob.out
[2025-05-24 12:40:27] -rw------- 1 boinc boinc    988612 May 24 11:06 agis_schedconf.cvmfs.json
[2025-05-24 12:40:27] -rw------- 1 boinc boinc   1596740 May 24 11:06 agis_ddmendpoints.agis.ALL.json
[2025-05-24 12:40:27] drwx------ 4 boinc boinc      4096 May 24 11:06 pilot3
[2025-05-24 12:40:27] -rw------- 1 boinc boinc        95 May 24 12:39 pilot_heartbeat.json
[2025-05-24 12:40:27] -rw------- 1 boinc boinc 196473606 May 24 12:39 HITS.44871837._002612.pool.root.1
[2025-05-24 12:40:27] -rw-r--r-- 1 boinc boinc       529 May 24 12:39 boinc_task_state.xml
[2025-05-24 12:40:27] -rw------- 1 boinc boinc      1025 May 24 12:39 memory_monitor_summary.json
[2025-05-24 12:40:27] -rw------- 1 boinc boinc    250953 May 24 12:40 log.44871837._002612.job.log.tgz.1
[2025-05-24 12:40:27] -rw------- 1 boinc boinc      7680 May 24 12:40 heartbeat.json
[2025-05-24 12:40:27] -rw-r--r-- 1 boinc boinc      8192 May 24 12:40 boinc_mmap_file
[2025-05-24 12:40:27] -rw-r--r-- 1 boinc boinc        27 May 24 12:40 wrapper_checkpoint.txt
[2025-05-24 12:40:27] -rw------- 1 boinc boinc      4747 May 24 12:40 pilotlog.txt
[2025-05-24 12:40:27] -rw------- 1 boinc boinc    535797 May 24 12:40 log.44871837._002612.job.log.1
[2025-05-24 12:40:27] -rw------- 1 boinc boinc       357 May 24 12:40 output.list
[2025-05-24 12:40:27] -rw-r--r-- 1 boinc boinc       620 May 24 12:40 runtime_log
[2025-05-24 12:40:27] -rw------- 1 boinc boinc    808960 May 24 12:40 result.tar.gz
[2025-05-24 12:40:27] -rw-r--r-- 1 boinc boinc      8748 May 24 12:40 runtime_log.err
[2025-05-24 12:40:27] -rw------- 1 boinc boinc       663 May 24 12:40 4YTKDmPVvc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmI7KKDmd30Gyn.diag
[2025-05-24 12:40:27] -rw-r--r-- 1 boinc boinc     21381 May 24 12:40 stderr.txt
[2025-05-24 12:40:27] HITS file was successfully produced:
[2025-05-24 12:40:27] -rw------- 1 boinc boinc 196473606 May 24 12:39 shared/HITS.pool.root.1
[2025-05-24 12:40:27]  *** Contents of shared directory: ***
[2025-05-24 12:40:27] total 410732
[2025-05-24 12:40:27] -rw-r--r-- 2 boinc boinc 222762483 May 24 11:06 ATLAS.root_0
[2025-05-24 12:40:27] -rw-r--r-- 2 boinc boinc    508869 May 24 11:06 input.tar.gz
[2025-05-24 12:40:27] -rw-r--r-- 2 boinc boinc     15093 May 24 11:06 start_atlas.sh
[2025-05-24 12:40:27] -rw------- 1 boinc boinc 196473606 May 24 12:39 HITS.pool.root.1
[2025-05-24 12:40:27] -rw------- 1 boinc boinc    808960 May 24 12:40 result.tar.gz
12:40:29 (358001): run_atlas exited; CPU time 21105.481985
12:40:29 (358001): called boinc_finish(0)

</stderr_txt>
]]>

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