Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:09:58 (26046): wrapper (7.7.26015): starting
16:09:58 (26046): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 16:09:58] Arguments: --nthreads 8
[2025-05-24 16:09:58] Threads: 8
[2025-05-24 16:09:58] Checking for CVMFS
[2025-05-24 16:10:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 16:10:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 16:10:00] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 16:10:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 16:10:01] 2.11.2.0 24996 17492 90724 146368 1 59 16566180 25165825 2533 130560 0 9207056 99.710 12535459 1903 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-24 16:10:01] CVMFS is ok
[2025-05-24 16:10:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 16:10:01] Checking for apptainer binary...
[2025-05-24 16:10:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 16:10:01] Running /usr/bin/apptainer --version
[2025-05-24 16:10:01] apptainer version 1.3.2-1.el7
[2025-05-24 16:10:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 16:10:03] cg-vwn259.simple-grid.lan
[2025-05-24 16:10:03] apptainer works
[2025-05-24 16:10:03] Set ATHENA_PROC_NUMBER=8
[2025-05-24 16:10:03] Set ATHENA_CORE_NUMBER=8
[2025-05-24 16:10:03] Starting ATLAS job with PandaID=6665267909
[2025-05-24 16:10:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/23 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 21:49:05]  *** The last 200 lines of the pilot log: ***
[2025-05-24 21:49:05] 2025-05-24 19:34:54,017 | INFO     | using path: /var/lib/boinc/slots/23/PanDA_Pilot-6665267909/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 21:49:05] 2025-05-24 19:34:54,018 | INFO     | extracted standard info from prmon json
[2025-05-24 21:49:05] 2025-05-24 19:34:54,018 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 21:49:05] 2025-05-24 19:34:54,018 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 21:49:05] 2025-05-24 19:34:54,019 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 21:49:05] 2025-05-24 19:34:54,019 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 21:49:05] 2025-05-24 19:34:54,025 | INFO     | fitting pss+swap vs Time
[2025-05-24 21:49:05] 2025-05-24 19:34:54,026 | INFO     | sum of square deviations: 9691828230.0
[2025-05-24 21:49:05] 2025-05-24 19:34:54,030 | INFO     | sum of deviations: 24098602416.0
[2025-05-24 21:49:05] 2025-05-24 19:34:54,030 | INFO     | mean x: 1748105608.0
[2025-05-24 21:49:05] 2025-05-24 19:34:54,030 | INFO     | mean y: 2486149.26984127
[2025-05-24 21:49:05] 2025-05-24 19:34:54,030 | INFO     | -- intersect: -4344155271.589508
[2025-05-24 21:49:05] 2025-05-24 19:34:54,031 | INFO     | intersect: -4344155271.589508
[2025-05-24 21:49:05] 2025-05-24 19:34:54,031 | INFO     | chi2: 2.344066803633954
[2025-05-24 21:49:05] 2025-05-24 19:34:54,032 | INFO     | sum of square deviations: 9237596457.5
[2025-05-24 21:49:05] 2025-05-24 19:34:54,035 | INFO     | sum of deviations: 44322008025.499985
[2025-05-24 21:49:05] 2025-05-24 19:34:54,035 | INFO     | mean x: 1748105455.5
[2025-05-24 21:49:05] 2025-05-24 19:34:54,036 | INFO     | mean y: 2492848.8677419354
[2025-05-24 21:49:05] 2025-05-24 19:34:54,036 | INFO     | -- intersect: -8384920953.473203
[2025-05-24 21:49:05] 2025-05-24 19:34:54,036 | INFO     | intersect: -8384920953.473203
[2025-05-24 21:49:05] 2025-05-24 19:34:54,036 | INFO     | chi2: 1.5718358886409098
[2025-05-24 21:49:05] 2025-05-24 19:34:54,036 | INFO     | current chi2=1.5718358886409098 (change=32.94406600511009 %)
[2025-05-24 21:49:05] 2025-05-24 19:34:54,041 | INFO     | sum of square deviations: 8797783560.0
[2025-05-24 21:49:05] 2025-05-24 19:34:54,045 | INFO     | sum of deviations: 43431185528.00001
[2025-05-24 21:49:05] 2025-05-24 19:34:54,045 | INFO     | mean x: 1748105303.0
[2025-05-24 21:49:05] 2025-05-24 19:34:54,045 | INFO     | mean y: 2492539.9770491803
[2025-05-24 21:49:05] 2025-05-24 19:34:54,045 | INFO     | -- intersect: -8627213478.50946
[2025-05-24 21:49:05] 2025-05-24 19:34:54,045 | INFO     | intersect: -8627213478.50946
[2025-05-24 21:49:05] 2025-05-24 19:34:54,046 | INFO     | chi2: 1.572318040336265
[2025-05-24 21:49:05] 2025-05-24 19:34:54,046 | INFO     | current chi2=1.572318040336265 (change=-0.030674429744198855 %)
[2025-05-24 21:49:05] 2025-05-24 19:34:54,046 | INFO     | right removable region: 304
[2025-05-24 21:49:05] 2025-05-24 19:34:54,047 | INFO     | sum of square deviations: 9237596457.5
[2025-05-24 21:49:05] 2025-05-24 19:34:54,050 | INFO     | sum of deviations: -25048630202.000004
[2025-05-24 21:49:05] 2025-05-24 19:34:54,050 | INFO     | mean x: 1748105760.5
[2025-05-24 21:49:05] 2025-05-24 19:34:54,051 | INFO     | mean y: 2502532.793548387
[2025-05-24 21:49:05] 2025-05-24 19:34:54,051 | INFO     | -- intersect: 4742659233.7500305
[2025-05-24 21:49:05] 2025-05-24 19:34:54,051 | INFO     | intersect: 4742659233.7500305
[2025-05-24 21:49:05] 2025-05-24 19:34:54,051 | INFO     | chi2: 0.8714914917283842
[2025-05-24 21:49:05] 2025-05-24 19:34:54,051 | INFO     | current chi2=0.8714914917283842 (change=62.82138843580181 %)
[2025-05-24 21:49:05] 2025-05-24 19:34:54,052 | INFO     | sum of square deviations: 8797783560.0
[2025-05-24 21:49:05] 2025-05-24 19:34:54,055 | INFO     | sum of deviations: -23917064097.99996
[2025-05-24 21:49:05] 2025-05-24 19:34:54,056 | INFO     | mean x: 1748105913.0
[2025-05-24 21:49:05] 2025-05-24 19:34:54,056 | INFO     | mean y: 2502122.6885245903
[2025-05-24 21:49:05] 2025-05-24 19:34:54,056 | INFO     | -- intersect: 4754785568.419683
[2025-05-24 21:49:05] 2025-05-24 19:34:54,056 | INFO     | intersect: 4754785568.419683
[2025-05-24 21:49:05] 2025-05-24 19:34:54,056 | INFO     | chi2: 0.8571926542964601
[2025-05-24 21:49:05] 2025-05-24 19:34:54,057 | INFO     | current chi2=0.8571926542964601 (change=1.6407317303311846 %)
[2025-05-24 21:49:05] 2025-05-24 19:34:54,057 | INFO     | left removable region: 20
[2025-05-24 21:49:05] 2025-05-24 19:34:54,057 | INFO     | sum of square deviations: 7102775035.0
[2025-05-24 21:49:05] 2025-05-24 19:34:54,060 | INFO     | sum of deviations: 11275848932.5
[2025-05-24 21:49:05] 2025-05-24 19:34:54,061 | INFO     | mean x: 1748105882.5
[2025-05-24 21:49:05] 2025-05-24 19:34:54,061 | INFO     | mean y: 2503443.0669014086
[2025-05-24 21:49:05] 2025-05-24 19:34:54,061 | INFO     | -- intersect: -2772662284.6879263
[2025-05-24 21:49:05] 2025-05-24 19:34:54,061 | INFO     | intersect: -2772662284.6879263
[2025-05-24 21:49:05] 2025-05-24 19:34:54,061 | INFO     | chi2: 0.0030316416129531486
[2025-05-24 21:49:05] 2025-05-24 19:34:54,062 | INFO     | -- intersect: -2772662284.6879263
[2025-05-24 21:49:05] 2025-05-24 19:34:54,062 | INFO     | current memory leak: 1.59 B/s (using 284 data points, chi2=0.00)
[2025-05-24 21:49:05] 2025-05-24 19:34:54,062 | INFO     | ..............................
[2025-05-24 21:49:05] 2025-05-24 19:34:54,063 | INFO     | . Timing measurements:
[2025-05-24 21:49:05] 2025-05-24 19:34:54,063 | INFO     | . get job = 0 s
[2025-05-24 21:49:05] 2025-05-24 19:34:54,063 | INFO     | . initial setup = 4 s
[2025-05-24 21:49:05] 2025-05-24 19:34:54,063 | INFO     | . payload setup = 15 s
[2025-05-24 21:49:05] 2025-05-24 19:34:54,063 | INFO     | . stage-in = 0 s
[2025-05-24 21:49:05] 2025-05-24 19:34:54,063 | INFO     | . payload execution = 19187 s
[2025-05-24 21:49:05] 2025-05-24 19:34:54,063 | INFO     | . stage-out = 3 s
[2025-05-24 21:49:05] 2025-05-24 19:34:54,063 | INFO     | . log creation = 1 s
[2025-05-24 21:49:05] 2025-05-24 19:34:54,063 | INFO     | ..............................
[2025-05-24 21:49:05] 2025-05-24 19:34:54,196 | INFO     | 
[2025-05-24 21:49:05] 2025-05-24 19:34:54,196 | INFO     | job summary report
[2025-05-24 21:49:05] 2025-05-24 19:34:54,196 | INFO     | --------------------------------------------------
[2025-05-24 21:49:05] 2025-05-24 19:34:54,196 | INFO     | PanDA job id: 6665267909
[2025-05-24 21:49:05] 2025-05-24 19:34:54,196 | INFO     | task id: 44871837
[2025-05-24 21:49:05] 2025-05-24 19:34:54,196 | INFO     | errors: (none)
[2025-05-24 21:49:05] 2025-05-24 19:34:54,196 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 21:49:05] 2025-05-24 19:34:54,197 | INFO     | pilot state: finished 
[2025-05-24 21:49:05] 2025-05-24 19:34:54,197 | INFO     | transexitcode: 0
[2025-05-24 21:49:05] 2025-05-24 19:34:54,197 | INFO     | exeerrorcode: 0
[2025-05-24 21:49:05] 2025-05-24 19:34:54,197 | INFO     | exeerrordiag: 
[2025-05-24 21:49:05] 2025-05-24 19:34:54,197 | INFO     | exitcode: 0
[2025-05-24 21:49:05] 2025-05-24 19:34:54,197 | INFO     | exitmsg: OK
[2025-05-24 21:49:05] 2025-05-24 19:34:54,197 | INFO     | cpuconsumptiontime: 75348 s
[2025-05-24 21:49:05] 2025-05-24 19:34:54,197 | INFO     | nevents: 400
[2025-05-24 21:49:05] 2025-05-24 19:34:54,197 | INFO     | neventsw: 0
[2025-05-24 21:49:05] 2025-05-24 19:34:54,197 | INFO     | pid: 9721
[2025-05-24 21:49:05] 2025-05-24 19:34:54,197 | INFO     | pgrp: 9721
[2025-05-24 21:49:05] 2025-05-24 19:34:54,198 | INFO     | corecount: 8
[2025-05-24 21:49:05] 2025-05-24 19:34:54,198 | INFO     | event service: False
[2025-05-24 21:49:05] 2025-05-24 19:34:54,198 | INFO     | sizes: {0: 2393566, 1: 2393765, 12: 2393765, 23: 2393793, 33: 2393821, 44: 2393877, 51: 2394239, 55: 2394267, 19207: 2426175, 19211: 2435118, 19212: 2435174, 19295
[2025-05-24 21:49:05] 2025-05-24 19:34:54,198 | INFO     | --------------------------------------------------
[2025-05-24 21:49:05] 2025-05-24 19:34:54,198 | INFO     | 
[2025-05-24 21:49:05] 2025-05-24 19:34:54,198 | INFO     | executing command: ls -lF /var/lib/boinc/slots/23
[2025-05-24 21:49:05] 2025-05-24 19:34:54,573 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 21:49:05] 2025-05-24 19:34:54,574 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 21:49:05] 2025-05-24 19:34:54,574 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 21:49:05] 2025-05-24 19:34:54,574 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 21:49:05] 2025-05-24 19:34:54,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 21:49:05] 2025-05-24 19:34:54,574 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 21:49:05] 2025-05-24 19:34:54,574 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 21:49:05] 2025-05-24 19:34:54,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 21:49:05] 2025-05-24 19:34:54,574 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 21:49:05] 2025-05-24 19:34:54,575 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 21:49:05] 2025-05-24 19:34:54,575 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 21:49:05] 2025-05-24 19:34:54,575 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 21:49:05] 2025-05-24 19:34:54,575 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 21:49:05] 2025-05-24 19:34:54,575 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 21:49:05] 2025-05-24 19:34:54,575 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 21:49:05] 2025-05-24 19:34:54,575 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 21:49:05] 2025-05-24 19:34:54,575 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 21:49:05] 2025-05-24 19:34:54,575 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 21:49:05] 2025-05-24 19:34:54,575 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 21:49:05] 2025-05-24 19:34:54,576 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 21:49:05] 2025-05-24 19:34:54,576 | INFO     | job 6665267909 has completed (purged errors)
[2025-05-24 21:49:05] 2025-05-24 19:34:54,576 | INFO     | overall cleanup function is called
[2025-05-24 21:49:05] 2025-05-24 19:34:55,585 | INFO     | --- collectZombieJob: --- 10, [9721]
[2025-05-24 21:49:05] 2025-05-24 19:34:55,585 | INFO     | zombie collector waiting for pid 9721
[2025-05-24 21:49:05] 2025-05-24 19:34:55,585 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 21:49:05] 2025-05-24 19:34:55,585 | INFO     | collected zombie processes
[2025-05-24 21:49:05] 2025-05-24 19:34:55,585 | INFO     | will attempt to kill all subprocesses of pid=9721
[2025-05-24 21:49:05] 2025-05-24 19:34:55,724 | INFO     | process IDs to be killed: [9721] (in reverse order)
[2025-05-24 21:49:05] 2025-05-24 19:34:56,436 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 21:49:05] 2025-05-24 19:34:56,437 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 21:49:05] 2025-05-24 19:34:56,440 | INFO     | did not find any defunct processes belonging to 9721
[2025-05-24 21:49:05] 2025-05-24 19:34:56,442 | INFO     | did not find any defunct processes belonging to 9721
[2025-05-24 21:49:05] 2025-05-24 19:34:56,442 | INFO     | ready for new job
[2025-05-24 21:49:05] 2025-05-24 19:34:56,448 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 21:49:05] 2025-05-24 19:34:56,450 | INFO     | **************************************
[2025-05-24 21:49:05] 2025-05-24 19:34:56,450 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 21:49:05] 2025-05-24 19:34:56,450 | INFO     | **************************************
[2025-05-24 21:49:05] 2025-05-24 19:34:56,450 | INFO     | 
[2025-05-24 21:49:05] 2025-05-24 19:34:56,451 | INFO     | pilot is running in a VM
[2025-05-24 21:49:05] 2025-05-24 19:34:56,451 | INFO     | architecture information:
[2025-05-24 21:49:05] 2025-05-24 19:34:56,463 | INFO     | executing command: cat /etc/os-release
[2025-05-24 21:49:05] 2025-05-24 19:34:56,773 | INFO     | cat /etc/os-release:
[2025-05-24 21:49:05] NAME="CentOS Linux"
[2025-05-24 21:49:05] VERSION="7 (Core)"
[2025-05-24 21:49:05] ID="centos"
[2025-05-24 21:49:05] ID_LIKE="rhel fedora"
[2025-05-24 21:49:05] VERSION_ID="7"
[2025-05-24 21:49:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 21:49:05] ANSI_COLOR="0;31"
[2025-05-24 21:49:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 21:49:05] HOME_URL="https://www.centos.org/"
[2025-05-24 21:49:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 21:49:05] 
[2025-05-24 21:49:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 21:49:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 21:49:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 21:49:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 21:49:05] 
[2025-05-24 21:49:05] 2025-05-24 19:34:56,774 | INFO     | **************************************
[2025-05-24 21:49:05] 2025-05-24 19:34:57,277 | INFO     | executing command: df -mP /var/lib/boinc/slots/23
[2025-05-24 21:49:05] 2025-05-24 19:34:57,563 | INFO     | sufficient remaining disk space (496694722560 B)
[2025-05-24 21:49:05] 2025-05-24 19:34:57,564 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 21:49:05] 2025-05-24 19:34:57,564 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 21:49:05] 2025-05-24 19:34:57,564 | INFO     | update_server=False
[2025-05-24 21:49:05] 2025-05-24 19:34:57,564 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 21:49:05] 2025-05-24 19:34:57,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 21:49:05] 2025-05-24 19:34:57,793 | INFO     | all job control threads have been joined
[2025-05-24 21:49:05] 2025-05-24 19:34:58,023 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 21:49:05] 2025-05-24 19:34:58,023 | INFO     | aborting loop
[2025-05-24 21:49:05] 2025-05-24 19:34:58,171 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 21:49:05] 2025-05-24 19:34:58,182 | INFO     | all payload control threads have been joined
[2025-05-24 21:49:05] 2025-05-24 19:34:58,305 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 21:49:05] 2025-05-24 19:34:58,305 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 21:49:05] 2025-05-24 19:34:58,305 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 21:49:05] 2025-05-24 19:34:58,443 | INFO     | all data control threads have been joined
[2025-05-24 21:49:05] 2025-05-24 19:34:58,570 | INFO     | [job] retrieve thread has finished
[2025-05-24 21:49:05] 2025-05-24 19:34:58,577 | INFO     | [payload] failed_post thread has finished
[2025-05-24 21:49:05] 2025-05-24 19:34:58,752 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 21:49:05] 2025-05-24 19:34:58,799 | INFO     | [job] control thread has finished
[2025-05-24 21:49:05] 2025-05-24 19:34:59,029 | INFO     | [job] job monitor thread has finished
[2025-05-24 21:49:05] 2025-05-24 19:34:59,089 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 21:49:05] 2025-05-24 19:34:59,188 | INFO     | [payload] control thread has finished
[2025-05-24 21:49:05] 2025-05-24 19:34:59,215 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 21:49:05] 2025-05-24 19:34:59,228 | INFO     | [job] validate thread has finished
[2025-05-24 21:49:05] 2025-05-24 19:34:59,449 | INFO     | [data] control thread has finished
[2025-05-24 21:49:05] 2025-05-24 19:34:59,774 | INFO     | [data] copytool_out thread has finished
[2025-05-24 21:49:05] 2025-05-24 19:34:59,791 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 21:49:05] 2025-05-24 19:34:59,949 | INFO     | [payload] validate_post thread has finished
[2025-05-24 21:49:05] 2025-05-24 19:34:59,962 | INFO     | [data] copytool_in thread has finished
[2025-05-24 21:49:05] 2025-05-24 19:34:59,997 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 21:49:05] 2025-05-24 19:35:00,221 | INFO     | [job] queue monitor thread has finished
[2025-05-24 21:49:05] 2025-05-24 19:35:02,180 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 21:49:05] 2025-05-24 19:35:03,335 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139755828049728)>', '<ExcThread(monitor, started 139755392059136)>']
[2025-05-24 21:49:05] 2025-05-24 19:35:03,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 21:49:05] 2025-05-24 19:35:03,338 | INFO     | [monitor] control thread has ended
[2025-05-24 21:49:05] 2025-05-24 19:35:08,361 | INFO     | all workflow threads have been joined
[2025-05-24 21:49:05] 2025-05-24 19:35:08,361 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 21:49:05] 2025-05-24 19:35:08,361 | INFO     | traces error code: 0
[2025-05-24 21:49:05] 2025-05-24 19:35:08,361 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 21:49:05] 2025-05-24 19:35:08,588 [wrapper] ==== pilot stdout END ====
[2025-05-24 21:49:05] 2025-05-24 19:35:08,627 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 21:49:05] 2025-05-24 19:35:08,685 [wrapper] pilotpid: 1320
[2025-05-24 21:49:05] 2025-05-24 19:35:08,702 [wrapper] Pilot exit status: 0
[2025-05-24 21:49:05] 2025-05-24 19:35:08,732 [wrapper] pandaids: 6665267909
[2025-05-24 21:49:05] 2025-05-24 19:35:08,779 [wrapper] cleanup supervisor_pilot 29752 1321
[2025-05-24 21:49:05] 2025-05-24 19:35:08,792 [wrapper] Test setup, not cleaning
[2025-05-24 21:49:05] 2025-05-24 19:35:08,848 [wrapper] apfmon messages muted
[2025-05-24 21:49:05] 2025-05-24 19:35:08,976 [wrapper] ==== wrapper stdout END ====
[2025-05-24 21:49:05] 2025-05-24 19:35:09,104 [wrapper] ==== wrapper stderr END ====
[2025-05-24 21:49:05]  *** Error codes and diagnostics ***
[2025-05-24 21:49:05]     "exeErrorCode": 0,
[2025-05-24 21:49:05]     "exeErrorDiag": "",
[2025-05-24 21:49:05]     "pilotErrorCode": 0,
[2025-05-24 21:49:05]     "pilotErrorDiag": "",
[2025-05-24 21:49:05]  *** Listing of results directory ***
[2025-05-24 21:49:05] total 425252
[2025-05-24 21:49:05] -rw-r--r--. 1 boinc boinc    495897 May 24 07:59 pilot3.tar.gz
[2025-05-24 21:49:05] -rw-r--r--. 1 boinc boinc      5111 May 24 08:03 queuedata.json
[2025-05-24 21:49:05] -rwx------. 1 boinc boinc     37140 May 24 08:03 runpilot2-wrapper.sh
[2025-05-24 21:49:05] -rw-r--r--. 1 boinc boinc       100 May 24 16:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 21:49:05] -rwxr-xr-x. 1 boinc boinc      7986 May 24 16:09 run_atlas
[2025-05-24 21:49:05] -rw-r--r--. 1 boinc boinc       105 May 24 16:09 job.xml
[2025-05-24 21:49:05] -rw-r--r--. 1 boinc boinc      6370 May 24 16:09 init_data.xml
[2025-05-24 21:49:05] -rw-r--r--. 2 boinc boinc 224792636 May 24 16:09 EVNT.44871834._000249.pool.root.1
[2025-05-24 21:49:05] -rw-r--r--. 2 boinc boinc     15093 May 24 16:09 start_atlas.sh
[2025-05-24 21:49:05] drwxrwx--x. 2 boinc boinc        68 May 24 16:09 shared
[2025-05-24 21:49:05] -rw-r--r--. 2 boinc boinc    508875 May 24 16:09 input.tar.gz
[2025-05-24 21:49:05] -rw-r--r--. 1 boinc boinc         0 May 24 16:09 boinc_lockfile
[2025-05-24 21:49:05] -rw-r--r--. 1 boinc boinc      2557 May 24 16:10 pandaJob.out
[2025-05-24 21:49:05] -rw-------. 1 boinc boinc    988556 May 24 16:12 agis_schedconf.cvmfs.json
[2025-05-24 21:49:05] drwx------. 4 boinc boinc      4096 May 24 16:12 pilot3
[2025-05-24 21:49:05] -rw-------. 1 boinc boinc 202700134 May 24 21:32 HITS.44871837._006208.pool.root.1
[2025-05-24 21:49:05] -rw-r--r--. 1 boinc boinc       531 May 24 21:32 boinc_task_state.xml
[2025-05-24 21:49:05] -rw-------. 1 boinc boinc      1016 May 24 21:33 memory_monitor_summary.json
[2025-05-24 21:49:05] -rw-------. 1 boinc boinc   1596740 May 24 21:33 agis_ddmendpoints.agis.ALL.json
[2025-05-24 21:49:05] -rw-------. 1 boinc boinc    425973 May 24 21:33 log.44871837._006208.job.log.tgz.1
[2025-05-24 21:49:05] -rw-------. 1 boinc boinc        95 May 24 21:34 pilot_heartbeat.json
[2025-05-24 21:49:05] -rw-------. 1 boinc boinc      7678 May 24 21:34 heartbeat.json
[2025-05-24 21:49:05] -rw-------. 1 boinc boinc      4417 May 24 21:35 pilotlog.txt
[2025-05-24 21:49:05] -rw-------. 1 boinc boinc   1649305 May 24 21:35 log.44871837._006208.job.log.1
[2025-05-24 21:49:05] -rw-------. 1 boinc boinc       357 May 24 21:35 output.list
[2025-05-24 21:49:05] -rw-r--r--. 1 boinc boinc       620 May 24 21:35 runtime_log
[2025-05-24 21:49:05] -rw-------. 1 boinc boinc   2088960 May 24 21:35 result.tar.gz
[2025-05-24 21:49:05] -rw-------. 1 boinc boinc       658 May 24 21:35 yM4NDmk9wc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXaLKDmri5wgn.diag
[2025-05-24 21:49:05] -rw-r--r--. 1 boinc boinc      8673 May 24 21:35 runtime_log.err
[2025-05-24 21:49:05] -rw-r--r--. 1 boinc boinc      8192 May 24 21:49 boinc_mmap_file
[2025-05-24 21:49:05] -rw-r--r--. 1 boinc boinc        28 May 24 21:49 wrapper_checkpoint.txt
[2025-05-24 21:49:05] -rw-r--r--. 1 boinc boinc     20527 May 24 21:49 stderr.txt
[2025-05-24 21:49:05] HITS file was successfully produced:
[2025-05-24 21:49:05] -rw-------. 1 boinc boinc 202700134 May 24 21:32 shared/HITS.pool.root.1
[2025-05-24 21:49:05]  *** Contents of shared directory: ***
[2025-05-24 21:49:05] total 420036
[2025-05-24 21:49:05] -rw-r--r--. 2 boinc boinc 224792636 May 24 16:09 ATLAS.root_0
[2025-05-24 21:49:05] -rw-r--r--. 2 boinc boinc     15093 May 24 16:09 start_atlas.sh
[2025-05-24 21:49:05] -rw-r--r--. 2 boinc boinc    508875 May 24 16:09 input.tar.gz
[2025-05-24 21:49:05] -rw-------. 1 boinc boinc 202700134 May 24 21:32 HITS.pool.root.1
[2025-05-24 21:49:05] -rw-------. 1 boinc boinc   2088960 May 24 21:35 result.tar.gz
21:49:07 (26046): run_atlas exited; CPU time 75618.117625
21:49:07 (26046): called boinc_finish(0)

</stderr_txt>
]]>

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