Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:31:32 (11887): wrapper (7.7.26015): starting
10:31:32 (11887): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 10:31:32] Arguments: --nthreads 8
[2025-05-24 10:31:32] Threads: 8
[2025-05-24 10:31:32] Checking for CVMFS
[2025-05-24 10:31:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 10:31:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 10:31:34] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 10:31:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 10:31:35] 2.11.2.0 24996 17153 90864 146360 2 21 15205055 25165825 2520 130560 0 9042128 99.786 11977400 1847 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-24 10:31:35] CVMFS is ok
[2025-05-24 10:31:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 10:31:35] Checking for apptainer binary...
[2025-05-24 10:31:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 10:31:35] Running /usr/bin/apptainer --version
[2025-05-24 10:31:35] apptainer version 1.3.2-1.el7
[2025-05-24 10:31:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 10:31:53] cg-vwn259.simple-grid.lan
[2025-05-24 10:31:53] apptainer works
[2025-05-24 10:31:53] Set ATHENA_PROC_NUMBER=8
[2025-05-24 10:31:53] Set ATHENA_CORE_NUMBER=8
[2025-05-24 10:31:53] Starting ATLAS job with PandaID=6665275193
[2025-05-24 10:31:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/23 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 16:09:53]  *** The last 200 lines of the pilot log: ***
[2025-05-24 16:09:53] 2025-05-24 13:34:28,346 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 16:09:53] 2025-05-24 13:34:28,346 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 16:09:53] 2025-05-24 13:34:28,358 | INFO     | fitting pss+swap vs Time
[2025-05-24 16:09:53] 2025-05-24 13:34:28,359 | INFO     | sum of square deviations: 7960484140.0
[2025-05-24 16:09:53] 2025-05-24 13:34:28,362 | INFO     | sum of deviations: -19463906900.999996
[2025-05-24 16:09:53] 2025-05-24 13:34:28,362 | INFO     | mean x: 1748084557.0
[2025-05-24 16:09:53] 2025-05-24 13:34:28,362 | INFO     | mean y: 2501086.2
[2025-05-24 16:09:53] 2025-05-24 13:34:28,363 | INFO     | -- intersect: 4276682715.625848
[2025-05-24 16:09:53] 2025-05-24 13:34:28,363 | INFO     | intersect: 4276682715.625848
[2025-05-24 16:09:53] 2025-05-24 13:34:28,363 | INFO     | chi2: 2.9235980706542284
[2025-05-24 16:09:53] 2025-05-24 13:34:28,364 | INFO     | sum of square deviations: 7562532492.5
[2025-05-24 16:09:53] 2025-05-24 13:34:28,367 | INFO     | sum of deviations: 475493475.00002205
[2025-05-24 16:09:53] 2025-05-24 13:34:28,367 | INFO     | mean x: 1748084404.5
[2025-05-24 16:09:53] 2025-05-24 13:34:28,367 | INFO     | mean y: 2508624.0896551725
[2025-05-24 16:09:53] 2025-05-24 13:34:28,367 | INFO     | -- intersect: -107402008.21683459
[2025-05-24 16:09:53] 2025-05-24 13:34:28,367 | INFO     | intersect: -107402008.21683459
[2025-05-24 16:09:53] 2025-05-24 13:34:28,368 | INFO     | chi2: 2.1552966227767905
[2025-05-24 16:09:53] 2025-05-24 13:34:28,368 | INFO     | current chi2=2.1552966227767905 (change=26.27931163278922 %)
[2025-05-24 16:09:53] 2025-05-24 13:34:28,368 | INFO     | sum of square deviations: 7178069470.0
[2025-05-24 16:09:53] 2025-05-24 13:34:28,371 | INFO     | sum of deviations: 504935551.9999917
[2025-05-24 16:09:53] 2025-05-24 13:34:28,371 | INFO     | mean x: 1748084252.0
[2025-05-24 16:09:53] 2025-05-24 13:34:28,371 | INFO     | mean y: 2508635.7719298247
[2025-05-24 16:09:53] 2025-05-24 13:34:28,371 | INFO     | -- intersect: -120458951.88031292
[2025-05-24 16:09:53] 2025-05-24 13:34:28,371 | INFO     | intersect: -120458951.88031292
[2025-05-24 16:09:53] 2025-05-24 13:34:28,372 | INFO     | chi2: 2.1553657657790266
[2025-05-24 16:09:53] 2025-05-24 13:34:28,372 | INFO     | current chi2=2.1553657657790266 (change=-0.003208050414289083 %)
[2025-05-24 16:09:53] 2025-05-24 13:34:28,372 | INFO     | right removable region: 284
[2025-05-24 16:09:53] 2025-05-24 13:34:28,381 | INFO     | sum of square deviations: 7562532492.5
[2025-05-24 16:09:53] 2025-05-24 13:34:28,384 | INFO     | sum of deviations: -76659872389.5
[2025-05-24 16:09:53] 2025-05-24 13:34:28,384 | INFO     | mean x: 1748084709.5
[2025-05-24 16:09:53] 2025-05-24 13:34:28,384 | INFO     | mean y: 2522878.796551724
[2025-05-24 16:09:53] 2025-05-24 13:34:28,384 | INFO     | -- intersect: 17722506348.51467
[2025-05-24 16:09:53] 2025-05-24 13:34:28,384 | INFO     | intersect: 17722506348.51467
[2025-05-24 16:09:53] 2025-05-24 13:34:28,385 | INFO     | chi2: 1.0620244687943032
[2025-05-24 16:09:53] 2025-05-24 13:34:28,385 | INFO     | current chi2=1.0620244687943032 (change=63.67406041704465 %)
[2025-05-24 16:09:53] 2025-05-24 13:34:28,385 | INFO     | sum of square deviations: 7178069470.0
[2025-05-24 16:09:53] 2025-05-24 13:34:28,388 | INFO     | sum of deviations: -79497435955.0
[2025-05-24 16:09:53] 2025-05-24 13:34:28,388 | INFO     | mean x: 1748084862.0
[2025-05-24 16:09:53] 2025-05-24 13:34:28,388 | INFO     | mean y: 2523972.7719298247
[2025-05-24 16:09:53] 2025-05-24 13:34:28,388 | INFO     | -- intersect: 19362640915.29436
[2025-05-24 16:09:53] 2025-05-24 13:34:28,389 | INFO     | intersect: 19362640915.29436
[2025-05-24 16:09:53] 2025-05-24 13:34:28,389 | INFO     | chi2: 1.0204483227773198
[2025-05-24 16:09:53] 2025-05-24 13:34:28,389 | INFO     | current chi2=1.0204483227773198 (change=3.9148011405221275 %)
[2025-05-24 16:09:53] 2025-05-24 13:34:28,389 | INFO     | left removable region: 20
[2025-05-24 16:09:53] 2025-05-24 13:34:28,390 | INFO     | sum of square deviations: 5705372090.0
[2025-05-24 16:09:53] 2025-05-24 13:34:28,392 | INFO     | sum of deviations: -41522820962.99997
[2025-05-24 16:09:53] 2025-05-24 13:34:28,392 | INFO     | mean x: 1748084831.5
[2025-05-24 16:09:53] 2025-05-24 13:34:28,392 | INFO     | mean y: 2525245.9545454546
[2025-05-24 16:09:53] 2025-05-24 13:34:28,392 | INFO     | -- intersect: 12724817910.044483
[2025-05-24 16:09:53] 2025-05-24 13:34:28,392 | INFO     | intersect: 12724817910.044483
[2025-05-24 16:09:53] 2025-05-24 13:34:28,393 | INFO     | chi2: 0.20199843428152855
[2025-05-24 16:09:53] 2025-05-24 13:34:28,393 | INFO     | -- intersect: 12724817910.044483
[2025-05-24 16:09:53] 2025-05-24 13:34:28,393 | INFO     | current memory leak: -7.28 B/s (using 264 data points, chi2=0.20)
[2025-05-24 16:09:53] 2025-05-24 13:34:28,394 | INFO     | ..............................
[2025-05-24 16:09:53] 2025-05-24 13:34:28,394 | INFO     | . Timing measurements:
[2025-05-24 16:09:53] 2025-05-24 13:34:28,394 | INFO     | . get job = 0 s
[2025-05-24 16:09:53] 2025-05-24 13:34:28,394 | INFO     | . initial setup = 2 s
[2025-05-24 16:09:53] 2025-05-24 13:34:28,394 | INFO     | . payload setup = 15 s
[2025-05-24 16:09:53] 2025-05-24 13:34:28,395 | INFO     | . stage-in = 0 s
[2025-05-24 16:09:53] 2025-05-24 13:34:28,395 | INFO     | . payload execution = 17998 s
[2025-05-24 16:09:53] 2025-05-24 13:34:28,395 | INFO     | . stage-out = 3 s
[2025-05-24 16:09:53] 2025-05-24 13:34:28,395 | INFO     | . log creation = 1 s
[2025-05-24 16:09:53] 2025-05-24 13:34:28,395 | INFO     | ..............................
[2025-05-24 16:09:53] 2025-05-24 13:34:29,008 | INFO     | 
[2025-05-24 16:09:53] 2025-05-24 13:34:29,008 | INFO     | job summary report
[2025-05-24 16:09:53] 2025-05-24 13:34:29,008 | INFO     | --------------------------------------------------
[2025-05-24 16:09:53] 2025-05-24 13:34:29,008 | INFO     | PanDA job id: 6665275193
[2025-05-24 16:09:53] 2025-05-24 13:34:29,008 | INFO     | task id: 44871837
[2025-05-24 16:09:53] 2025-05-24 13:34:29,008 | INFO     | errors: (none)
[2025-05-24 16:09:53] 2025-05-24 13:34:29,009 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 16:09:53] 2025-05-24 13:34:29,009 | INFO     | pilot state: finished 
[2025-05-24 16:09:53] 2025-05-24 13:34:29,009 | INFO     | transexitcode: 0
[2025-05-24 16:09:53] 2025-05-24 13:34:29,009 | INFO     | exeerrorcode: 0
[2025-05-24 16:09:53] 2025-05-24 13:34:29,009 | INFO     | exeerrordiag: 
[2025-05-24 16:09:53] 2025-05-24 13:34:29,009 | INFO     | exitcode: 0
[2025-05-24 16:09:53] 2025-05-24 13:34:29,009 | INFO     | exitmsg: OK
[2025-05-24 16:09:53] 2025-05-24 13:34:29,009 | INFO     | cpuconsumptiontime: 69603 s
[2025-05-24 16:09:53] 2025-05-24 13:34:29,009 | INFO     | nevents: 400
[2025-05-24 16:09:53] 2025-05-24 13:34:29,009 | INFO     | neventsw: 0
[2025-05-24 16:09:53] 2025-05-24 13:34:29,009 | INFO     | pid: 24158
[2025-05-24 16:09:53] 2025-05-24 13:34:29,009 | INFO     | pgrp: 24158
[2025-05-24 16:09:53] 2025-05-24 13:34:29,010 | INFO     | corecount: 8
[2025-05-24 16:09:53] 2025-05-24 13:34:29,010 | INFO     | event service: False
[2025-05-24 16:09:53] 2025-05-24 13:34:29,010 | INFO     | sizes: {0: 2393735, 1: 2393735, 8: 2393969, 12: 2393997, 18018: 2425586, 18021: 2434529, 18024: 2434713, 18113: 2434883}
[2025-05-24 16:09:53] 2025-05-24 13:34:29,010 | INFO     | --------------------------------------------------
[2025-05-24 16:09:53] 2025-05-24 13:34:29,010 | INFO     | 
[2025-05-24 16:09:53] 2025-05-24 13:34:29,010 | INFO     | executing command: ls -lF /var/lib/boinc/slots/23
[2025-05-24 16:09:53] 2025-05-24 13:34:29,325 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 16:09:53] 2025-05-24 13:34:29,325 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 16:09:53] 2025-05-24 13:34:29,326 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 16:09:53] 2025-05-24 13:34:29,326 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 16:09:53] 2025-05-24 13:34:29,326 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 16:09:53] 2025-05-24 13:34:29,326 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 16:09:53] 2025-05-24 13:34:29,326 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 16:09:53] 2025-05-24 13:34:29,326 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 16:09:53] 2025-05-24 13:34:29,326 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 16:09:53] 2025-05-24 13:34:29,326 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 16:09:53] 2025-05-24 13:34:29,326 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 16:09:53] 2025-05-24 13:34:29,326 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 16:09:53] 2025-05-24 13:34:29,326 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 16:09:53] 2025-05-24 13:34:29,327 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 16:09:53] 2025-05-24 13:34:29,327 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 16:09:53] 2025-05-24 13:34:29,327 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 16:09:53] 2025-05-24 13:34:29,327 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 16:09:53] 2025-05-24 13:34:29,327 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 16:09:53] 2025-05-24 13:34:29,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 16:09:53] 2025-05-24 13:34:29,327 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 16:09:53] 2025-05-24 13:34:29,327 | INFO     | job 6665275193 has completed (purged errors)
[2025-05-24 16:09:53] 2025-05-24 13:34:29,327 | INFO     | overall cleanup function is called
[2025-05-24 16:09:53] 2025-05-24 13:34:29,884 | INFO     | PID=15806 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-24 16:09:53] 2025-05-24 13:34:29,884 | INFO     | .. there are 9 such processes running
[2025-05-24 16:09:53] 2025-05-24 13:34:30,337 | INFO     | --- collectZombieJob: --- 10, [24158]
[2025-05-24 16:09:53] 2025-05-24 13:34:30,337 | INFO     | zombie collector waiting for pid 24158
[2025-05-24 16:09:53] 2025-05-24 13:34:30,337 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 16:09:53] 2025-05-24 13:34:30,337 | INFO     | collected zombie processes
[2025-05-24 16:09:53] 2025-05-24 13:34:30,337 | INFO     | will attempt to kill all subprocesses of pid=24158
[2025-05-24 16:09:53] 2025-05-24 13:34:30,445 | INFO     | process IDs to be killed: [24158] (in reverse order)
[2025-05-24 16:09:53] 2025-05-24 13:34:31,174 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 16:09:53] 2025-05-24 13:34:31,174 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 16:09:53] 2025-05-24 13:34:31,180 | INFO     | did not find any defunct processes belonging to 24158
[2025-05-24 16:09:53] 2025-05-24 13:34:31,183 | INFO     | did not find any defunct processes belonging to 24158
[2025-05-24 16:09:53] 2025-05-24 13:34:31,184 | INFO     | ready for new job
[2025-05-24 16:09:53] 2025-05-24 13:34:31,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 16:09:53] 2025-05-24 13:34:31,186 | INFO     | **************************************
[2025-05-24 16:09:53] 2025-05-24 13:34:31,186 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 16:09:53] 2025-05-24 13:34:31,186 | INFO     | **************************************
[2025-05-24 16:09:53] 2025-05-24 13:34:31,186 | INFO     | 
[2025-05-24 16:09:53] 2025-05-24 13:34:31,187 | INFO     | pilot is running in a VM
[2025-05-24 16:09:53] 2025-05-24 13:34:31,187 | INFO     | architecture information:
[2025-05-24 16:09:53] 2025-05-24 13:34:31,188 | INFO     | executing command: cat /etc/os-release
[2025-05-24 16:09:53] 2025-05-24 13:34:31,219 | INFO     | cat /etc/os-release:
[2025-05-24 16:09:53] NAME="CentOS Linux"
[2025-05-24 16:09:53] VERSION="7 (Core)"
[2025-05-24 16:09:53] ID="centos"
[2025-05-24 16:09:53] ID_LIKE="rhel fedora"
[2025-05-24 16:09:53] VERSION_ID="7"
[2025-05-24 16:09:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 16:09:53] ANSI_COLOR="0;31"
[2025-05-24 16:09:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 16:09:53] HOME_URL="https://www.centos.org/"
[2025-05-24 16:09:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 16:09:53] 
[2025-05-24 16:09:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 16:09:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 16:09:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 16:09:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 16:09:53] 
[2025-05-24 16:09:53] 2025-05-24 13:34:31,220 | INFO     | **************************************
[2025-05-24 16:09:53] 2025-05-24 13:34:31,723 | INFO     | executing command: df -mP /var/lib/boinc/slots/23
[2025-05-24 16:09:53] 2025-05-24 13:34:31,790 | INFO     | sufficient remaining disk space (496640196608 B)
[2025-05-24 16:09:53] 2025-05-24 13:34:31,790 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 16:09:53] 2025-05-24 13:34:31,790 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 16:09:53] 2025-05-24 13:34:31,790 | INFO     | update_server=False
[2025-05-24 16:09:53] 2025-05-24 13:34:31,790 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 16:09:53] 2025-05-24 13:34:31,791 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 16:09:53] 2025-05-24 13:34:31,893 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 16:09:53] 2025-05-24 13:34:31,893 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 16:09:53] 2025-05-24 13:34:31,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 16:09:53] 2025-05-24 13:34:31,925 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-24 16:09:53] 2025-05-24 13:34:31,925 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-24 16:09:53] 2025-05-24 13:34:31,925 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 16:09:53] 2025-05-24 13:34:31,925 | INFO     | will abort loop
[2025-05-24 16:09:53] 2025-05-24 13:34:32,105 | INFO     | all data control threads have been joined
[2025-05-24 16:09:53] 2025-05-24 13:34:32,306 | INFO     | all payload control threads have been joined
[2025-05-24 16:09:53] 2025-05-24 13:34:32,492 | INFO     | all job control threads have been joined
[2025-05-24 16:09:53] 2025-05-24 13:34:32,796 | INFO     | [job] retrieve thread has finished
[2025-05-24 16:09:53] 2025-05-24 13:34:32,909 | INFO     | [payload] validate_post thread has finished
[2025-05-24 16:09:53] 2025-05-24 13:34:32,930 | INFO     | [job] job monitor thread has finished
[2025-05-24 16:09:53] 2025-05-24 13:34:33,054 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 16:09:53] 2025-05-24 13:34:33,111 | INFO     | [data] control thread has finished
[2025-05-24 16:09:53] 2025-05-24 13:34:33,271 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 16:09:53] 2025-05-24 13:34:33,312 | INFO     | [payload] control thread has finished
[2025-05-24 16:09:53] 2025-05-24 13:34:33,424 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 16:09:53] 2025-05-24 13:34:33,498 | INFO     | [job] control thread has finished
[2025-05-24 16:09:53] 2025-05-24 13:34:33,537 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 16:09:53] 2025-05-24 13:34:33,962 | INFO     | [data] copytool_in thread has finished
[2025-05-24 16:09:53] 2025-05-24 13:34:33,989 | INFO     | [payload] failed_post thread has finished
[2025-05-24 16:09:53] 2025-05-24 13:34:33,993 | INFO     | [job] validate thread has finished
[2025-05-24 16:09:53] 2025-05-24 13:34:33,993 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 16:09:53] 2025-05-24 13:34:34,006 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 16:09:53] 2025-05-24 13:34:34,543 | INFO     | [job] queue monitor thread has finished
[2025-05-24 16:09:53] 2025-05-24 13:34:35,061 | INFO     | [data] copytool_out thread has finished
[2025-05-24 16:09:53] 2025-05-24 13:34:35,800 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 16:09:53] 2025-05-24 13:34:36,214 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140285301962560)>', '<ExcThread(monitor, started 140284990035712)>']
[2025-05-24 16:09:53] 2025-05-24 13:34:36,924 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 16:09:53] 2025-05-24 13:34:36,924 | INFO     | [monitor] control thread has ended
[2025-05-24 16:09:53] 2025-05-24 13:34:41,240 | INFO     | all workflow threads have been joined
[2025-05-24 16:09:53] 2025-05-24 13:34:41,240 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 16:09:53] 2025-05-24 13:34:41,240 | INFO     | traces error code: 0
[2025-05-24 16:09:53] 2025-05-24 13:34:41,241 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 16:09:53] 2025-05-24 13:34:41,422 [wrapper] ==== pilot stdout END ====
[2025-05-24 16:09:53] 2025-05-24 13:34:41,454 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 16:09:53] 2025-05-24 13:34:41,492 [wrapper] pilotpid: 15806
[2025-05-24 16:09:53] 2025-05-24 13:34:41,552 [wrapper] Pilot exit status: 0
[2025-05-24 16:09:53] 2025-05-24 13:34:41,866 [wrapper] pandaids: 6665275193
[2025-05-24 16:09:53] 2025-05-24 13:34:42,868 [wrapper] cleanup supervisor_pilot  2842 15807
[2025-05-24 16:09:53] 2025-05-24 13:34:42,933 [wrapper] Test setup, not cleaning
[2025-05-24 16:09:53] 2025-05-24 13:34:43,042 [wrapper] apfmon messages muted
[2025-05-24 16:09:53] 2025-05-24 13:34:43,104 [wrapper] ==== wrapper stdout END ====
[2025-05-24 16:09:53] 2025-05-24 13:34:43,159 [wrapper] ==== wrapper stderr END ====
[2025-05-24 16:09:53]  *** Error codes and diagnostics ***
[2025-05-24 16:09:53]     "exeErrorCode": 0,
[2025-05-24 16:09:53]     "exeErrorDiag": "",
[2025-05-24 16:09:53]     "pilotErrorCode": 0,
[2025-05-24 16:09:53]     "pilotErrorDiag": "",
[2025-05-24 16:09:53]  *** Listing of results directory ***
[2025-05-24 16:09:53] total 418744
[2025-05-24 16:09:53] -rw-r--r--. 1 boinc boinc    495897 May 24 08:34 pilot3.tar.gz
[2025-05-24 16:09:53] -rwx------. 1 boinc boinc     37140 May 24 08:48 runpilot2-wrapper.sh
[2025-05-24 16:09:53] -rw-r--r--. 1 boinc boinc      5111 May 24 08:48 queuedata.json
[2025-05-24 16:09:53] -rw-r--r--. 1 boinc boinc       100 May 24 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 16:09:53] -rwxr-xr-x. 1 boinc boinc      7986 May 24 10:31 run_atlas
[2025-05-24 16:09:53] -rw-r--r--. 1 boinc boinc       105 May 24 10:31 job.xml
[2025-05-24 16:09:53] -rw-r--r--. 2 boinc boinc 223888808 May 24 10:31 EVNT.44871834._000335.pool.root.1
[2025-05-24 16:09:53] -rw-r--r--. 1 boinc boinc      6370 May 24 10:31 init_data.xml
[2025-05-24 16:09:53] -rw-r--r--. 2 boinc boinc     15093 May 24 10:31 start_atlas.sh
[2025-05-24 16:09:53] drwxrwx--x. 2 boinc boinc        68 May 24 10:31 shared
[2025-05-24 16:09:53] -rw-r--r--. 2 boinc boinc    508879 May 24 10:31 input.tar.gz
[2025-05-24 16:09:53] -rw-r--r--. 1 boinc boinc         0 May 24 10:31 boinc_lockfile
[2025-05-24 16:09:53] -rw-r--r--. 1 boinc boinc      2555 May 24 10:31 pandaJob.out
[2025-05-24 16:09:53] -rw-------. 1 boinc boinc    988612 May 24 10:32 agis_schedconf.cvmfs.json
[2025-05-24 16:09:53] drwx------. 4 boinc boinc      4096 May 24 10:32 pilot3
[2025-05-24 16:09:53] -rw-------. 1 boinc boinc 197123550 May 24 15:31 HITS.44871837._008368.pool.root.1
[2025-05-24 16:09:53] -rw-r--r--. 1 boinc boinc       531 May 24 15:31 boinc_task_state.xml
[2025-05-24 16:09:53] -rw-------. 1 boinc boinc      1017 May 24 15:32 memory_monitor_summary.json
[2025-05-24 16:09:53] -rw-------. 1 boinc boinc   1596740 May 24 15:32 agis_ddmendpoints.agis.ALL.json
[2025-05-24 16:09:53] -rw-------. 1 boinc boinc    428070 May 24 15:32 log.44871837._008368.job.log.tgz.1
[2025-05-24 16:09:53] -rw-------. 1 boinc boinc      7686 May 24 15:34 heartbeat.json
[2025-05-24 16:09:53] -rw-------. 1 boinc boinc        95 May 24 15:34 pilot_heartbeat.json
[2025-05-24 16:09:53] -rw-------. 1 boinc boinc      4603 May 24 15:34 pilotlog.txt
[2025-05-24 16:09:53] -rw-------. 1 boinc boinc   1553471 May 24 15:34 log.44871837._008368.job.log.1
[2025-05-24 16:09:53] -rw-------. 1 boinc boinc       357 May 24 15:34 output.list
[2025-05-24 16:09:53] -rw-r--r--. 1 boinc boinc       620 May 24 15:34 runtime_log
[2025-05-24 16:09:53] -rw-------. 1 boinc boinc   1996800 May 24 15:34 result.tar.gz
[2025-05-24 16:09:53] -rw-------. 1 boinc boinc       657 May 24 15:34 WUkKDmNrxc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmzpLKDmYnpVlm.diag
[2025-05-24 16:09:53] -rw-r--r--. 1 boinc boinc      8673 May 24 15:34 runtime_log.err
[2025-05-24 16:09:53] -rw-r--r--. 1 boinc boinc        28 May 24 16:09 wrapper_checkpoint.txt
[2025-05-24 16:09:53] -rw-r--r--. 1 boinc boinc      8192 May 24 16:09 boinc_mmap_file
[2025-05-24 16:09:53] -rw-r--r--. 1 boinc boinc     20571 May 24 16:09 stderr.txt
[2025-05-24 16:09:53] HITS file was successfully produced:
[2025-05-24 16:09:53] -rw-------. 1 boinc boinc 197123550 May 24 15:31 shared/HITS.pool.root.1
[2025-05-24 16:09:53]  *** Contents of shared directory: ***
[2025-05-24 16:09:53] total 413616
[2025-05-24 16:09:53] -rw-r--r--. 2 boinc boinc 223888808 May 24 10:31 ATLAS.root_0
[2025-05-24 16:09:53] -rw-r--r--. 2 boinc boinc     15093 May 24 10:31 start_atlas.sh
[2025-05-24 16:09:53] -rw-r--r--. 2 boinc boinc    508879 May 24 10:31 input.tar.gz
[2025-05-24 16:09:53] -rw-------. 1 boinc boinc 197123550 May 24 15:31 HITS.pool.root.1
[2025-05-24 16:09:53] -rw-------. 1 boinc boinc   1996800 May 24 15:34 result.tar.gz
16:09:55 (11887): run_atlas exited; CPU time 69850.090863
16:09:55 (11887): called boinc_finish(0)

</stderr_txt>
]]>

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