Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:37:05 (1487298): wrapper (7.7.26015): starting
16:37:05 (1487298): wrapper: running run_atlas (--nthreads 4)
[2025-05-24 16:37:05] Arguments: --nthreads 4
[2025-05-24 16:37:05] Threads: 4
[2025-05-24 16:37:05] Checking for CVMFS
[2025-05-24 16:37:05] No cvmfs_config command found, will try listing directly
[2025-05-24 16:37:05] CVMFS is ok
[2025-05-24 16:37:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 16:37:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 16:37:05] Further information can be found at the LHC@home message board.
[2025-05-24 16:37:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 16:37:05] Checking for apptainer binary...
[2025-05-24 16:37:05] which: no apptainer in ((null))
[2025-05-24 16:37:05] apptainer is not installed, using version from CVMFS
[2025-05-24 16:37:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 16:37:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-05-24 16:37:05] apptainer works
[2025-05-24 16:37:05] Set ATHENA_PROC_NUMBER=4
[2025-05-24 16:37:05] Set ATHENA_CORE_NUMBER=4
[2025-05-24 16:37:05] Starting ATLAS job with PandaID=6665273684
[2025-05-24 16:37:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 19:56:23]  *** The last 200 lines of the pilot log: ***
[2025-05-24 19:56:23] 2025-05-24 17:56:04,751 | INFO     | monitor loop #818: job 0:6665273684 is in state 'finished'
[2025-05-24 19:56:23] 2025-05-24 17:56:04,752 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 19:56:23] 2025-05-24 17:56:07,256 | INFO     | monitor loop #819: job 0:6665273684 is in state 'finished'
[2025-05-24 19:56:23] 2025-05-24 17:56:07,256 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 19:56:23] 2025-05-24 17:56:09,084 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-24 19:56:23] 2025-05-24 17:56:09,085 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6665273684/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 19:56:23] 2025-05-24 17:56:09,085 | INFO     | extracted standard info from prmon json
[2025-05-24 19:56:23] 2025-05-24 17:56:09,085 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 19:56:23] 2025-05-24 17:56:09,085 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 19:56:23] 2025-05-24 17:56:09,086 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 19:56:23] 2025-05-24 17:56:09,086 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 19:56:23] 2025-05-24 17:56:09,090 | INFO     | fitting pss+swap vs Time
[2025-05-24 19:56:23] 2025-05-24 17:56:09,090 | INFO     | sum of square deviations: 2299168690.0
[2025-05-24 19:56:23] 2025-05-24 17:56:09,092 | INFO     | sum of deviations: 17628879525.0
[2025-05-24 19:56:23] 2025-05-24 17:56:09,092 | INFO     | mean x: 1748103390.0
[2025-05-24 19:56:23] 2025-05-24 17:56:09,092 | INFO     | mean y: 2323469.8102564104
[2025-05-24 19:56:23] 2025-05-24 17:56:09,092 | INFO     | -- intersect: -13401262005.927101
[2025-05-24 19:56:23] 2025-05-24 17:56:09,092 | INFO     | intersect: -13401262005.927101
[2025-05-24 19:56:23] 2025-05-24 17:56:09,092 | INFO     | chi2: 1.3124468938356668
[2025-05-24 19:56:23] 2025-05-24 17:56:09,093 | INFO     | sum of square deviations: 2126802667.5
[2025-05-24 19:56:23] 2025-05-24 17:56:09,094 | INFO     | sum of deviations: 17109623125.000002
[2025-05-24 19:56:23] 2025-05-24 17:56:09,094 | INFO     | mean x: 1748103237.5
[2025-05-24 19:56:23] 2025-05-24 17:56:09,094 | INFO     | mean y: 2323010.294736842
[2025-05-24 19:56:23] 2025-05-24 17:56:09,094 | INFO     | -- intersect: -14060753002.476612
[2025-05-24 19:56:23] 2025-05-24 17:56:09,094 | INFO     | intersect: -14060753002.476612
[2025-05-24 19:56:23] 2025-05-24 17:56:09,095 | INFO     | chi2: 1.3132886205377667
[2025-05-24 19:56:23] 2025-05-24 17:56:09,095 | INFO     | current chi2=1.3132886205377667 (change=-0.06413415324104646 %)
[2025-05-24 19:56:23] 2025-05-24 17:56:09,095 | INFO     | right removable region: 189
[2025-05-24 19:56:23] 2025-05-24 17:56:09,095 | INFO     | sum of square deviations: 2126802667.5
[2025-05-24 19:56:23] 2025-05-24 17:56:09,096 | INFO     | sum of deviations: -6562382257.0
[2025-05-24 19:56:23] 2025-05-24 17:56:09,096 | INFO     | mean x: 1748103542.5
[2025-05-24 19:56:23] 2025-05-24 17:56:09,097 | INFO     | mean y: 2344578.610526316
[2025-05-24 19:56:23] 2025-05-24 17:56:09,097 | INFO     | -- intersect: 5396227069.921086
[2025-05-24 19:56:23] 2025-05-24 17:56:09,097 | INFO     | intersect: 5396227069.921086
[2025-05-24 19:56:23] 2025-05-24 17:56:09,097 | INFO     | chi2: 0.010271979298849767
[2025-05-24 19:56:23] 2025-05-24 17:56:09,097 | INFO     | current chi2=0.010271979298849767 (change=99.21734133799276 %)
[2025-05-24 19:56:23] 2025-05-24 17:56:09,098 | INFO     | sum of square deviations: 1963274020.0
[2025-05-24 19:56:23] 2025-05-24 17:56:09,099 | INFO     | sum of deviations: -6374238492.999999
[2025-05-24 19:56:23] 2025-05-24 17:56:09,099 | INFO     | mean x: 1748103695.0
[2025-05-24 19:56:23] 2025-05-24 17:56:09,099 | INFO     | mean y: 2344391.7837837837
[2025-05-24 19:56:23] 2025-05-24 17:56:09,099 | INFO     | -- intersect: 5677980980.926104
[2025-05-24 19:56:23] 2025-05-24 17:56:09,099 | INFO     | intersect: 5677980980.926104
[2025-05-24 19:56:23] 2025-05-24 17:56:09,099 | INFO     | chi2: 0.008716885649876657
[2025-05-24 19:56:23] 2025-05-24 17:56:09,099 | INFO     | current chi2=0.008716885649876657 (change=15.13918207708271 %)
[2025-05-24 19:56:23] 2025-05-24 17:56:09,100 | INFO     | left removable region: 20
[2025-05-24 19:56:23] 2025-05-24 17:56:09,100 | INFO     | sum of square deviations: 1496660620.0
[2025-05-24 19:56:23] 2025-05-24 17:56:09,101 | INFO     | sum of deviations: -4691349631.0
[2025-05-24 19:56:23] 2025-05-24 17:56:09,101 | INFO     | mean x: 1748103817.0
[2025-05-24 19:56:23] 2025-05-24 17:56:09,101 | INFO     | mean y: 2342808.023668639
[2025-05-24 19:56:23] 2025-05-24 17:56:09,101 | INFO     | -- intersect: 5481852382.367009
[2025-05-24 19:56:23] 2025-05-24 17:56:09,101 | INFO     | intersect: 5481852382.367009
[2025-05-24 19:56:23] 2025-05-24 17:56:09,101 | INFO     | chi2: 0.008175189504720268
[2025-05-24 19:56:23] 2025-05-24 17:56:09,102 | INFO     | -- intersect: 5481852382.367009
[2025-05-24 19:56:23] 2025-05-24 17:56:09,102 | INFO     | current memory leak: -3.13 B/s (using 169 data points, chi2=0.01)
[2025-05-24 19:56:23] 2025-05-24 17:56:09,102 | INFO     | ..............................
[2025-05-24 19:56:23] 2025-05-24 17:56:09,102 | INFO     | . Timing measurements:
[2025-05-24 19:56:23] 2025-05-24 17:56:09,102 | INFO     | . get job = 0 s
[2025-05-24 19:56:23] 2025-05-24 17:56:09,102 | INFO     | . initial setup = 1 s
[2025-05-24 19:56:23] 2025-05-24 17:56:09,103 | INFO     | . payload setup = 9 s
[2025-05-24 19:56:23] 2025-05-24 17:56:09,103 | INFO     | . stage-in = 0 s
[2025-05-24 19:56:23] 2025-05-24 17:56:09,103 | INFO     | . payload execution = 11888 s
[2025-05-24 19:56:23] 2025-05-24 17:56:09,103 | INFO     | . stage-out = 1 s
[2025-05-24 19:56:23] 2025-05-24 17:56:09,103 | INFO     | . log creation = 0 s
[2025-05-24 19:56:23] 2025-05-24 17:56:09,103 | INFO     | ..............................
[2025-05-24 19:56:23] 2025-05-24 17:56:09,203 | INFO     | 
[2025-05-24 19:56:23] 2025-05-24 17:56:09,204 | INFO     | job summary report
[2025-05-24 19:56:23] 2025-05-24 17:56:09,204 | INFO     | --------------------------------------------------
[2025-05-24 19:56:23] 2025-05-24 17:56:09,204 | INFO     | PanDA job id: 6665273684
[2025-05-24 19:56:23] 2025-05-24 17:56:09,204 | INFO     | task id: 44871837
[2025-05-24 19:56:23] 2025-05-24 17:56:09,204 | INFO     | errors: (none)
[2025-05-24 19:56:23] 2025-05-24 17:56:09,204 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 19:56:23] 2025-05-24 17:56:09,204 | INFO     | pilot state: finished 
[2025-05-24 19:56:23] 2025-05-24 17:56:09,204 | INFO     | transexitcode: 0
[2025-05-24 19:56:23] 2025-05-24 17:56:09,204 | INFO     | exeerrorcode: 0
[2025-05-24 19:56:23] 2025-05-24 17:56:09,204 | INFO     | exeerrordiag: 
[2025-05-24 19:56:23] 2025-05-24 17:56:09,204 | INFO     | exitcode: 0
[2025-05-24 19:56:23] 2025-05-24 17:56:09,205 | INFO     | exitmsg: OK
[2025-05-24 19:56:23] 2025-05-24 17:56:09,205 | INFO     | cpuconsumptiontime: 45486 s
[2025-05-24 19:56:23] 2025-05-24 17:56:09,205 | INFO     | nevents: 400
[2025-05-24 19:56:23] 2025-05-24 17:56:09,205 | INFO     | neventsw: 0
[2025-05-24 19:56:23] 2025-05-24 17:56:09,205 | INFO     | pid: 1498533
[2025-05-24 19:56:23] 2025-05-24 17:56:09,205 | INFO     | pgrp: 1498533
[2025-05-24 19:56:23] 2025-05-24 17:56:09,205 | INFO     | corecount: 4
[2025-05-24 19:56:23] 2025-05-24 17:56:09,205 | INFO     | event service: False
[2025-05-24 19:56:23] 2025-05-24 17:56:09,205 | INFO     | sizes: {0: 2393575, 1: 2393774, 7: 2393980, 12: 2394008, 11901: 2423807, 11903: 2432770, 11906: 2432954, 11913: 2433124}
[2025-05-24 19:56:23] 2025-05-24 17:56:09,205 | INFO     | --------------------------------------------------
[2025-05-24 19:56:23] 2025-05-24 17:56:09,205 | INFO     | 
[2025-05-24 19:56:23] 2025-05-24 17:56:09,206 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-05-24 19:56:23] 2025-05-24 17:56:09,240 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 19:56:23] 2025-05-24 17:56:09,240 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 19:56:23] 2025-05-24 17:56:09,240 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 19:56:23] 2025-05-24 17:56:09,240 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 19:56:23] 2025-05-24 17:56:09,240 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 19:56:23] 2025-05-24 17:56:09,240 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 19:56:23] 2025-05-24 17:56:09,241 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 19:56:23] 2025-05-24 17:56:09,241 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 19:56:23] 2025-05-24 17:56:09,241 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 19:56:23] 2025-05-24 17:56:09,241 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 19:56:23] 2025-05-24 17:56:09,241 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 19:56:23] 2025-05-24 17:56:09,241 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 19:56:23] 2025-05-24 17:56:09,241 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 19:56:23] 2025-05-24 17:56:09,241 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 19:56:23] 2025-05-24 17:56:09,241 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 19:56:23] 2025-05-24 17:56:09,241 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 19:56:23] 2025-05-24 17:56:09,241 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 19:56:23] 2025-05-24 17:56:09,242 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 19:56:23] 2025-05-24 17:56:09,242 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 19:56:23] 2025-05-24 17:56:09,242 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 19:56:23] 2025-05-24 17:56:09,242 | INFO     | job 6665273684 has completed (purged errors)
[2025-05-24 19:56:23] 2025-05-24 17:56:09,242 | INFO     | overall cleanup function is called
[2025-05-24 19:56:23] 2025-05-24 17:56:10,247 | INFO     | --- collectZombieJob: --- 10, [1498533]
[2025-05-24 19:56:23] 2025-05-24 17:56:10,248 | INFO     | zombie collector waiting for pid 1498533
[2025-05-24 19:56:23] 2025-05-24 17:56:10,248 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 19:56:23] 2025-05-24 17:56:10,248 | INFO     | collected zombie processes
[2025-05-24 19:56:23] 2025-05-24 17:56:10,248 | INFO     | will attempt to kill all subprocesses of pid=1498533
[2025-05-24 19:56:23] 2025-05-24 17:56:10,951 | INFO     | process IDs to be killed: [1498533] (in reverse order)
[2025-05-24 19:56:23] 2025-05-24 17:56:11,235 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 19:56:23] 2025-05-24 17:56:11,236 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 19:56:23] 2025-05-24 17:56:11,290 | INFO     | did not find any defunct processes belonging to 1498533
[2025-05-24 19:56:23] 2025-05-24 17:56:11,337 | INFO     | did not find any defunct processes belonging to 1498533
[2025-05-24 19:56:23] 2025-05-24 17:56:11,337 | INFO     | ready for new job
[2025-05-24 19:56:23] 2025-05-24 17:56:11,337 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 19:56:23] 2025-05-24 17:56:11,339 | INFO     | **************************************
[2025-05-24 19:56:23] 2025-05-24 17:56:11,339 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 19:56:23] 2025-05-24 17:56:11,339 | INFO     | **************************************
[2025-05-24 19:56:23] 2025-05-24 17:56:11,340 | INFO     | 
[2025-05-24 19:56:23] 2025-05-24 17:56:11,351 | INFO     | architecture information:
[2025-05-24 19:56:23] 2025-05-24 17:56:11,351 | INFO     | executing command: cat /etc/os-release
[2025-05-24 19:56:23] 2025-05-24 17:56:11,375 | INFO     | cat /etc/os-release:
[2025-05-24 19:56:23] NAME="CentOS Linux"
[2025-05-24 19:56:23] VERSION="7 (Core)"
[2025-05-24 19:56:23] ID="centos"
[2025-05-24 19:56:23] ID_LIKE="rhel fedora"
[2025-05-24 19:56:23] VERSION_ID="7"
[2025-05-24 19:56:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 19:56:23] ANSI_COLOR="0;31"
[2025-05-24 19:56:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 19:56:23] HOME_URL="https://www.centos.org/"
[2025-05-24 19:56:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 19:56:23] 
[2025-05-24 19:56:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 19:56:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 19:56:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 19:56:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 19:56:23] 
[2025-05-24 19:56:23] 2025-05-24 17:56:11,375 | INFO     | **************************************
[2025-05-24 19:56:23] 2025-05-24 17:56:11,878 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-05-24 19:56:23] 2025-05-24 17:56:11,910 | INFO     | sufficient remaining disk space (3308370526208 B)
[2025-05-24 19:56:23] 2025-05-24 17:56:11,911 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 19:56:23] 2025-05-24 17:56:11,911 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 19:56:23] 2025-05-24 17:56:11,911 | INFO     | update_server=False
[2025-05-24 19:56:23] 2025-05-24 17:56:11,911 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 19:56:23] 2025-05-24 17:56:12,070 | INFO     | PID=1491192 has CPU usage=18.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-05-24 19:56:23] 2025-05-24 17:56:12,070 | INFO     | .. there are 29 such processes running
[2025-05-24 19:56:23] 2025-05-24 17:56:12,070 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 19:56:23] 2025-05-24 17:56:12,071 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 19:56:23] 2025-05-24 17:56:12,071 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 19:56:23] 2025-05-24 17:56:12,143 | INFO     | all data control threads have been joined
[2025-05-24 19:56:23] 2025-05-24 17:56:12,266 | INFO     | all payload control threads have been joined
[2025-05-24 19:56:23] 2025-05-24 17:56:12,267 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-24 19:56:23] 2025-05-24 17:56:12,268 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-24 19:56:23] 2025-05-24 17:56:12,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 19:56:23] 2025-05-24 17:56:12,268 | INFO     | will abort loop
[2025-05-24 19:56:23] 2025-05-24 17:56:12,454 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 19:56:23] 2025-05-24 17:56:12,604 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 19:56:23] 2025-05-24 17:56:12,914 | INFO     | [job] retrieve thread has finished
[2025-05-24 19:56:23] 2025-05-24 17:56:13,064 | INFO     | [payload] validate_post thread has finished
[2025-05-24 19:56:23] 2025-05-24 17:56:13,148 | INFO     | [data] control thread has finished
[2025-05-24 19:56:23] 2025-05-24 17:56:13,271 | INFO     | [job] job monitor thread has finished
[2025-05-24 19:56:23] 2025-05-24 17:56:13,271 | INFO     | [payload] control thread has finished
[2025-05-24 19:56:23] 2025-05-24 17:56:13,318 | INFO     | all job control threads have been joined
[2025-05-24 19:56:23] 2025-05-24 17:56:13,329 | INFO     | [payload] failed_post thread has finished
[2025-05-24 19:56:23] 2025-05-24 17:56:13,352 | INFO     | [data] copytool_in thread has finished
[2025-05-24 19:56:23] 2025-05-24 17:56:13,517 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 19:56:23] 2025-05-24 17:56:13,578 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 19:56:23] 2025-05-24 17:56:13,583 | INFO     | [job] validate thread has finished
[2025-05-24 19:56:23] 2025-05-24 17:56:13,877 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 19:56:23] 2025-05-24 17:56:14,195 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 19:56:23] 2025-05-24 17:56:14,210 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 19:56:23] 2025-05-24 17:56:14,323 | INFO     | [job] control thread has finished
[2025-05-24 19:56:23] 2025-05-24 17:56:14,609 | INFO     | [data] copytool_out thread has finished
[2025-05-24 19:56:23] 2025-05-24 17:56:15,215 | INFO     | [job] queue monitor thread has finished
[2025-05-24 19:56:23] 2025-05-24 17:56:16,460 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 19:56:23] 2025-05-24 17:56:18,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23285965125440)>', '<ExcThread(monitor, started 23285727201024)>']
[2025-05-24 19:56:23] 2025-05-24 17:56:18,100 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 19:56:23] 2025-05-24 17:56:18,101 | INFO     | [monitor] control thread has ended
[2025-05-24 19:56:23] 2025-05-24 17:56:23,092 | INFO     | all workflow threads have been joined
[2025-05-24 19:56:23] 2025-05-24 17:56:23,092 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 19:56:23] 2025-05-24 17:56:23,092 | INFO     | traces error code: 0
[2025-05-24 19:56:23] 2025-05-24 17:56:23,092 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 19:56:23] 2025-05-24 17:56:23,225 [wrapper] ==== pilot stdout END ====
[2025-05-24 19:56:23] 2025-05-24 17:56:23,229 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 19:56:23] 2025-05-24 17:56:23,232 [wrapper] pilotpid: 1491192
[2025-05-24 19:56:23] 2025-05-24 17:56:23,236 [wrapper] Pilot exit status: 0
[2025-05-24 19:56:23] 2025-05-24 17:56:23,250 [wrapper] pandaids: 6665273684
[2025-05-24 19:56:23] 2025-05-24 17:56:23,396 [wrapper] cleanup supervisor_pilot 2563599 1491193
[2025-05-24 19:56:23] 2025-05-24 17:56:23,401 [wrapper] Test setup, not cleaning
[2025-05-24 19:56:23] 2025-05-24 17:56:23,405 [wrapper] apfmon messages muted
[2025-05-24 19:56:23] 2025-05-24 17:56:23,410 [wrapper] ==== wrapper stdout END ====
[2025-05-24 19:56:23] 2025-05-24 17:56:23,415 [wrapper] ==== wrapper stderr END ====
[2025-05-24 19:56:23]  *** Error codes and diagnostics ***
[2025-05-24 19:56:23]     "exeErrorCode": 0,
[2025-05-24 19:56:23]     "exeErrorDiag": "",
[2025-05-24 19:56:23]     "pilotErrorCode": 0,
[2025-05-24 19:56:23]     "pilotErrorDiag": "",
[2025-05-24 19:56:23]  *** Listing of results directory ***
[2025-05-24 19:56:23] total 416008
[2025-05-24 19:56:23] -rw-r--r-- 1 boinc boinc    495897 May 24 08:18 pilot3.tar.gz
[2025-05-24 19:56:23] -rw-r--r-- 1 boinc boinc      5111 May 24 08:21 queuedata.json
[2025-05-24 19:56:23] -rwx------ 1 boinc boinc     37140 May 24 08:22 runpilot2-wrapper.sh
[2025-05-24 19:56:23] -rw-r--r-- 1 boinc boinc       100 May 24 16:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 19:56:23] -rwxr-xr-x 1 boinc boinc      7986 May 24 16:36 run_atlas
[2025-05-24 19:56:23] -rw-r--r-- 1 boinc boinc       105 May 24 16:36 job.xml
[2025-05-24 19:56:23] -rw-r--r-- 2 boinc boinc 223712143 May 24 16:37 EVNT.44871834._000306.pool.root.1
[2025-05-24 19:56:23] -rw-r--r-- 1 boinc boinc      6675 May 24 16:37 init_data.xml
[2025-05-24 19:56:23] -rw-r--r-- 2 boinc boinc     15093 May 24 16:37 start_atlas.sh
[2025-05-24 19:56:23] drwxrwx--x 2 boinc boinc      4096 May 24 16:37 shared
[2025-05-24 19:56:23] -rw-r--r-- 2 boinc boinc    508878 May 24 16:37 input.tar.gz
[2025-05-24 19:56:23] -rw-r--r-- 1 boinc boinc         0 May 24 16:37 boinc_lockfile
[2025-05-24 19:56:23] -rw-r--r-- 1 boinc boinc      2556 May 24 16:37 pandaJob.out
[2025-05-24 19:56:23] -rw------- 1 boinc boinc    988556 May 24 16:37 agis_schedconf.cvmfs.json
[2025-05-24 19:56:23] drwx------ 4 boinc boinc      4096 May 24 16:37 pilot3
[2025-05-24 19:56:23] -rw-r--r-- 1 boinc boinc       531 May 24 19:55 boinc_task_state.xml
[2025-05-24 19:56:23] -rw------- 1 boinc boinc 195611985 May 24 19:55 HITS.44871837._007642.pool.root.1
[2025-05-24 19:56:23] -rw------- 1 boinc boinc      1027 May 24 19:55 memory_monitor_summary.json
[2025-05-24 19:56:23] -rw------- 1 boinc boinc        95 May 24 19:55 pilot_heartbeat.json
[2025-05-24 19:56:23] -rw------- 1 boinc boinc   1596740 May 24 19:55 agis_ddmendpoints.agis.ALL.json
[2025-05-24 19:56:23] -rw------- 1 boinc boinc    319593 May 24 19:55 log.44871837._007642.job.log.tgz.1
[2025-05-24 19:56:23] -rw------- 1 boinc boinc      7698 May 24 19:56 heartbeat.json
[2025-05-24 19:56:23] -rw-r--r-- 1 boinc boinc        28 May 24 19:56 wrapper_checkpoint.txt
[2025-05-24 19:56:23] -rw-r--r-- 1 boinc boinc      8192 May 24 19:56 boinc_mmap_file
[2025-05-24 19:56:23] -rw------- 1 boinc boinc      4946 May 24 19:56 pilotlog.txt
[2025-05-24 19:56:23] -rw------- 1 boinc boinc   1099658 May 24 19:56 log.44871837._007642.job.log.1
[2025-05-24 19:56:23] -rw------- 1 boinc boinc       357 May 24 19:56 output.list
[2025-05-24 19:56:23] -rw-r--r-- 1 boinc boinc       620 May 24 19:56 runtime_log
[2025-05-24 19:56:23] -rw------- 1 boinc boinc   1433600 May 24 19:56 result.tar.gz
[2025-05-24 19:56:23] -rw-r--r-- 1 boinc boinc      9026 May 24 19:56 runtime_log.err
[2025-05-24 19:56:23] -rw------- 1 boinc boinc       665 May 24 19:56 g5SMDmTSxc7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzvPKDmYYbvHo.diag
[2025-05-24 19:56:23] -rw-r--r-- 1 boinc boinc     20932 May 24 19:56 stderr.txt
[2025-05-24 19:56:23] HITS file was successfully produced:
[2025-05-24 19:56:23] -rw------- 1 boinc boinc 195611985 May 24 19:55 shared/HITS.pool.root.1
[2025-05-24 19:56:23]  *** Contents of shared directory: ***
[2025-05-24 19:56:23] total 411424
[2025-05-24 19:56:23] -rw-r--r-- 2 boinc boinc 223712143 May 24 16:37 ATLAS.root_0
[2025-05-24 19:56:23] -rw-r--r-- 2 boinc boinc     15093 May 24 16:37 start_atlas.sh
[2025-05-24 19:56:23] -rw-r--r-- 2 boinc boinc    508878 May 24 16:37 input.tar.gz
[2025-05-24 19:56:23] -rw------- 1 boinc boinc 195611985 May 24 19:55 HITS.pool.root.1
[2025-05-24 19:56:23] -rw------- 1 boinc boinc   1433600 May 24 19:56 result.tar.gz
19:56:25 (1487298): run_atlas exited; CPU time 46196.806526
19:56:25 (1487298): called boinc_finish(0)

</stderr_txt>
]]>

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