Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-26 22:15:25 (4136): Detected: vboxwrapper 26206
2025-05-26 22:15:25 (4136): Detected: BOINC client v8.0.2
2025-05-26 22:15:26 (4136): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-05-26 22:15:26 (4136): Successfully copied 'init_data.xml' to the shared directory.
2025-05-26 22:15:27 (4136): Create VM. (boinc_eda21f35cf1915b6, slot#3)
2025-05-26 22:15:27 (4136): Setting Memory Size for VM. (4400MB)
2025-05-26 22:15:28 (4136): Setting CPU Count for VM. (4)
2025-05-26 22:15:28 (4136): Setting Chipset Options for VM.
2025-05-26 22:15:28 (4136): Setting Graphics Controller Options for VM.
2025-05-26 22:15:28 (4136): Setting Boot Options for VM.
2025-05-26 22:15:29 (4136): Setting Network Configuration for NAT.
2025-05-26 22:15:29 (4136): Enabling VM Network Access.
2025-05-26 22:15:29 (4136): Disabling USB Support for VM.
2025-05-26 22:15:29 (4136): Disabling COM Port Support for VM.
2025-05-26 22:15:30 (4136): Disabling LPT Port Support for VM.
2025-05-26 22:15:30 (4136): Disabling Audio Support for VM.
2025-05-26 22:15:30 (4136): Disabling Clipboard Support for VM.
2025-05-26 22:15:30 (4136): Disabling Drag and Drop Support for VM.
2025-05-26 22:15:31 (4136): Adding storage controller(s) to VM.
2025-05-26 22:15:31 (4136): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-26 22:15:32 (4136): Adding VirtualBox Guest Additions to VM.
2025-05-26 22:15:32 (4136): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-26 22:15:32 (4136): forwarding host port 3184 to guest port 80
2025-05-26 22:15:32 (4136): Enabling remote desktop for VM.
2025-05-26 22:15:33 (4136): Required extension pack not installed, remote desktop not enabled.
2025-05-26 22:15:33 (4136): Enabling shared directory for VM.
2025-05-26 22:15:33 (4136): Starting VM using VBoxManage interface. (boinc_eda21f35cf1915b6, slot#3)
2025-05-26 22:15:42 (4136): Successfully started VM. (PID = '1384')
2025-05-26 22:15:42 (4136): Reporting VM Process ID to BOINC.
2025-05-26 22:15:42 (4136): Guest Log: BIOS: VirtualBox 7.1.8
2025-05-26 22:15:42 (4136): Guest Log: CPUID EDX: 0x178bfbff
2025-05-26 22:15:42 (4136): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-26 22:15:42 (4136): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-26 22:15:42 (4136): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-26 22:15:42 (4136): Detected: Web Application Enabled (http://localhost:3184)
2025-05-26 22:15:42 (4136): Preference change detected
2025-05-26 22:15:42 (4136): Setting CPU throttle for VM. (100%)
2025-05-26 22:15:42 (4136): Setting checkpoint interval to 999 seconds. (Higher value of (Preference: 999 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-26 22:15:44 (4136): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-26 22:15:44 (4136): Guest Log: BIOS: Booting from Hard Disk...
2025-05-26 22:15:47 (4136): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-26 22:15:47 (4136): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-26 22:15:47 (4136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-26 22:15:55 (4136): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-26 22:15:55 (4136): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-26 22:16:05 (4136): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-26 22:16:05 (4136): Guest Log: 00:00:00.000237 main     Log opened 2025-05-26T22:16:03.432841000Z
2025-05-26 22:16:05 (4136): Guest Log: 00:00:00.000408 main     OS Product: Linux
2025-05-26 22:16:05 (4136): Guest Log: 00:00:00.000472 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-26 22:16:05 (4136): Guest Log: 00:00:00.000531 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-26 22:16:05 (4136): Guest Log: 00:00:00.000590 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-26 22:16:05 (4136): Guest Log: 00:00:00.000592 main     Process ID: 1328
2025-05-26 22:16:05 (4136): Guest Log: 00:00:00.000593 main     Package type: LINUX_64BITS_GENERIC
2025-05-26 22:16:05 (4136): Guest Log: 00:00:00.002383 main     5.2.32 r132073 started. Verbose level = 0
2025-05-26 22:16:05 (4136): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-26 22:16:05 (4136): Guest Log: [INFO] Mounting shared directory
2025-05-26 22:16:05 (4136): Guest Log: [INFO] Checking for init_data.xml
2025-05-26 22:16:12 (4136): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-26 22:16:12 (4136): Guest Log: [INFO] Detected branch: prod
2025-05-26 22:16:14 (4136): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-26 22:16:14 (4136): Guest Log: Copying input files
2025-05-26 22:16:15 (4136): Guest Log: 00:00:10.006872 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 472 918 000ns (GuestNow=1 748 290 574 966 263 000 ns GuestLast=1 748 297 763 439 181 000 ns fSetTimeLastLoop=true )
2025-05-26 22:16:16 (4136): Guest Log: Copied input files into RunAtlas.
2025-05-26 22:16:16 (4136): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-26 22:16:16 (4136): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-26 22:16:16 (4136): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-26 22:16:16 (4136): Guest Log: Further information can be found at the LHC@home message board.
2025-05-26 22:16:25 (4136): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-26 22:16:26 (4136): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-26 22:16:26 (4136): Guest Log: 2.6.3.0 1604 0 30192 146455 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-26 22:16:27 (4136): Guest Log: copied the webapp to /var/www
2025-05-26 22:16:27 (4136): Guest Log: ATHENA_PROC_NUMBER=4
2025-05-26 22:16:27 (4136): Guest Log: ATHENA_CORE_NUMBER=4
2025-05-26 22:16:27 (4136): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-26 22:16:27 (4136): Guest Log:  *** Starting ATLAS job. (PandaID=6653395170 taskID=44638099) ***
2025-05-26 23:58:19 (4136): Status Report: Elapsed Time: '6000.943235'
2025-05-26 23:58:19 (4136): Status Report: CPU Time: '18247.062500'
2025-05-27 01:41:15 (4136): Status Report: Elapsed Time: '12001.081919'
2025-05-27 01:41:15 (4136): Status Report: CPU Time: '42747.953125'
2025-05-27 03:25:26 (4136): Status Report: Elapsed Time: '18001.711704'
2025-05-27 03:25:26 (4136): Status Report: CPU Time: '67429.203125'
2025-05-27 05:09:23 (4136): Status Report: Elapsed Time: '24002.248850'
2025-05-27 05:09:23 (4136): Status Report: CPU Time: '91850.281250'
2025-05-27 06:52:59 (4136): Status Report: Elapsed Time: '30002.586342'
2025-05-27 06:52:59 (4136): Status Report: CPU Time: '115563.328125'
2025-05-27 06:57:00 (4136): Guest Log:  *** Job finished ***
2025-05-27 06:57:00 (4136): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-27 06:57:00 (4136): Guest Log: 2025-05-27 04:56:47,505 | INFO     | [job] validate thread has finished
2025-05-27 06:57:00 (4136): Guest Log: 2025-05-27 04:56:47,819 | INFO     | [payload] control thread has finished
2025-05-27 06:57:00 (4136): Guest Log: 2025-05-27 04:56:51,389 | INFO     | [data] queue_monitor thread has finished
2025-05-27 06:57:00 (4136): Guest Log: 2025-05-27 04:56:53,104 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140036317927232)>', '<ExcThread(monitor, started 140035663853312)>']
2025-05-27 06:57:00 (4136): Guest Log: 2025-05-27 04:56:53,391 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-27 06:57:00 (4136): Guest Log: 2025-05-27 04:56:53,392 | INFO     | [monitor] control thread has ended
2025-05-27 06:57:00 (4136): Guest Log: 2025-05-27 04:56:58,110 | INFO     | all workflow threads have been joined
2025-05-27 06:57:00 (4136): Guest Log: 2025-05-27 04:56:58,110 | INFO     | end of generic workflow (traces error code: 0)
2025-05-27 06:57:00 (4136): Guest Log: 2025-05-27 04:56:58,110 | INFO     | traces error code: 0
2025-05-27 06:57:00 (4136): Guest Log: 2025-05-27 04:56:58,111 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-27 06:57:00 (4136): Guest Log: 2025-05-27 04:56:58,238 [wrapper] ==== pilot stdout END ====
2025-05-27 06:57:00 (4136): Guest Log: 2025-05-27 04:56:58,246 [wrapper] ==== wrapper stdout RESUME ====
2025-05-27 06:57:00 (4136): Guest Log: 2025-05-27 04:56:58,254 [wrapper] pilotpid: 5929
2025-05-27 06:57:00 (4136): Guest Log: 2025-05-27 04:56:58,262 [wrapper] Pilot exit status: 0
2025-05-27 06:57:00 (4136): Guest Log: 2025-05-27 04:56:59,184 [wrapper] pandaids: 6653395170
2025-05-27 06:57:00 (4136): Guest Log: 2025-05-27 04:56:59,223 [wrapper] cleanup supervisor_pilot  6973 5930
2025-05-27 06:57:00 (4136): Guest Log: 2025-05-27 04:56:59,229 [wrapper] Test setup, not cleaning
2025-05-27 06:57:00 (4136): Guest Log: 2025-05-27 04:56:59,235 [wrapper] apfmon messages muted
2025-05-27 06:57:00 (4136): Guest Log: 2025-05-27 04:56:59,241 [wrapper] ==== wrapper stdout END ====
2025-05-27 06:57:00 (4136): Guest Log: 2025-05-27 04:56:59,247 [wrapper] ==== wrapper stderr END ====
2025-05-27 06:57:00 (4136): Guest Log:  *** Error codes and diagnostics ***
2025-05-27 06:57:00 (4136): Guest Log:     "exeErrorCode": 0,
2025-05-27 06:57:00 (4136): Guest Log:     "exeErrorDiag": "",
2025-05-27 06:57:00 (4136): Guest Log:     "pilotErrorCode": 0,
2025-05-27 06:57:00 (4136): Guest Log:     "pilotErrorDiag": "",
2025-05-27 06:57:00 (4136): Guest Log:  *** Listing of results directory ***
2025-05-27 06:57:00 (4136): Guest Log: total 200144
2025-05-27 06:57:00 (4136): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 17 06:57 pilot3.tar.gz
2025-05-27 06:57:00 (4136): Guest Log: -rwx------. 1 atlas atlas     37140 May 17 07:17 runpilot2-wrapper.sh
2025-05-27 06:57:00 (4136): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 17 07:17 queuedata.json
2025-05-27 06:57:00 (4136): Guest Log: -rwxr-xr-x. 1 atlas atlas      9141 May 26 20:16 init_data.xml
2025-05-27 06:57:00 (4136): Guest Log: -rwxr-xr-x. 1 atlas atlas    508876 May 26 20:16 input.tar.gz
2025-05-27 06:57:00 (4136): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 May 26 20:16 start_atlas.sh
2025-05-27 06:57:00 (4136): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 26 20:16 EVNT.44638096._002076.pool.root.1 -> /data/./ATLAS.root_0
2025-05-27 06:57:00 (4136): Guest Log: -rw-r--r--. 1 atlas atlas      2540 May 26 20:16 pandaJob.out
2025-05-27 06:57:00 (4136): Guest Log: -rw-------. 1 atlas atlas       424 May 26 20:16 setup.sh.local
2025-05-27 06:57:00 (4136): Guest Log: -rw-------. 1 atlas atlas    990402 May 26 20:18 agis_schedconf.cvmfs.json
2025-05-27 06:57:00 (4136): Guest Log: drwx------. 4 atlas atlas      4096 May 26 20:18 pilot3
2025-05-27 06:57:00 (4136): Guest Log: -rw-------. 1 atlas atlas 195124233 May 27 04:55 HITS.44638099._051951.pool.root.1
2025-05-27 06:57:00 (4136): Guest Log: -rw-------. 1 atlas atlas        95 May 27 04:56 pilot_heartbeat.json
2025-05-27 06:57:00 (4136): Guest Log: -rw-------. 1 atlas atlas      1031 May 27 04:56 memory_monitor_summary.json
2025-05-27 06:57:00 (4136): Guest Log: -rw-------. 1 atlas atlas   1603667 May 27 04:56 agis_ddmendpoints.agis.ALL.json
2025-05-27 06:57:00 (4136): Guest Log: -rw-------. 1 atlas atlas    481879 May 27 04:56 log.44638099._051951.job.log.tgz.1
2025-05-27 06:57:00 (4136): Guest Log: -rw-------. 1 atlas atlas      7699 May 27 04:56 heartbeat.json
2025-05-27 06:57:00 (4136): Guest Log: -rw-------. 1 atlas atlas      4536 May 27 04:56 pilotlog.txt
2025-05-27 06:57:00 (4136): Guest Log: -rw-------. 1 atlas atlas   2535953 May 27 04:56 log.44638099._051951.job.log.1
2025-05-27 06:57:00 (4136): Guest Log: -rw-------. 1 atlas atlas       357 May 27 04:56 output.list
2025-05-27 06:57:00 (4136): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 27 04:56 runtime_log
2025-05-27 06:57:00 (4136): Guest Log: -rw-------. 1 atlas atlas   3041280 May 27 04:56 result.tar.gz
2025-05-27 06:57:00 (4136): Guest Log: -rw-------. 1 atlas atlas       662 May 27 04:56 vHjLDm0yQa7n9Rq4apOajLDm4fhM0noT9bVof3QYDmK9JKDm6tBhHm.diag
2025-05-27 06:57:00 (4136): Guest Log: -rw-r--r--. 1 atlas atlas     10941 May 27 04:56 runtime_log.err
2025-05-27 06:57:00 (4136): Guest Log: Looking for outputfile HITS.44638099._051951.pool.root.1
2025-05-27 06:57:00 (4136): Guest Log: HITS file was successfully produced
2025-05-27 06:57:00 (4136): Guest Log: -rw-------. 1 atlas atlas 195124233 May 27 04:55 /home/atlas/RunAtlas/HITS.44638099._051951.pool.root.1
2025-05-27 06:57:02 (4136): Guest Log: Successfully finished the ATLAS job!
2025-05-27 06:57:02 (4136): Guest Log: Copying the results back to the shared directory!
2025-05-27 06:57:02 (4136): Guest Log:  *** Contents of shared directory: ***
2025-05-27 06:57:02 (4136): Guest Log: total 414104
2025-05-27 06:57:02 (4136): Guest Log: -rwxrwxrwx. 1 root root 225327361 May 26 20:15 ATLAS.root_0
2025-05-27 06:57:02 (4136): Guest Log: -rwxrwxrwx. 1 root root 195124233 May 27 04:57 HITS.pool.root.1
2025-05-27 06:57:02 (4136): Guest Log: -rwxrwxrwx. 1 root root      9141 May 26 20:15 init_data.xml
2025-05-27 06:57:02 (4136): Guest Log: -rwxrwxrwx. 1 root root    508876 May 24 06:43 input.tar.gz
2025-05-27 06:57:02 (4136): Guest Log: -rwxrwxrwx. 1 root root   3041280 May 27 04:57 result.tar.gz
2025-05-27 06:57:02 (4136): Guest Log: -rwxrwxrwx. 1 root root     17569 May 24 06:43 start_atlas.sh
2025-05-27 06:57:02 (4136): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-27 06:57:02 (4136): VM Completion File Detected.
2025-05-27 06:57:02 (4136): Powering off VM.
2025-05-27 06:57:03 (4136): Successfully stopped VM.
2025-05-27 06:57:03 (4136): Deregistering VM. (boinc_eda21f35cf1915b6, slot#3)
2025-05-27 06:57:03 (4136): Removing network bandwidth throttle group from VM.
2025-05-27 06:57:03 (4136): Removing VM from VirtualBox.
06:57:09 (4136): called boinc_finish(0)

</stderr_txt>
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