Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:42:33 (3345187): wrapper (7.7.26015): starting
18:42:33 (3345187): wrapper: running run_atlas (--nthreads 12)
[2025-05-24 18:42:33] Arguments: --nthreads 12
[2025-05-24 18:42:33] Threads: 12
[2025-05-24 18:42:33] Checking for CVMFS
[2025-05-24 18:42:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 18:42:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 18:42:34] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 18:47:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 18:47:00] 2.12.7.0 40999 11875 256992 146373 2 213 30168467 46080000 32015 130560 1 101360156 99.893 26733711 1793 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-05-24 18:47:00] CVMFS is ok
[2025-05-24 18:47:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 18:47:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 18:47:00] Further information can be found at the LHC@home message board.
[2025-05-24 18:47:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 18:47:00] Checking for apptainer binary...
[2025-05-24 18:47:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 18:47:00] Running /usr/bin/apptainer --version
[2025-05-24 18:47:00] apptainer version 1.4.0-1.el9
[2025-05-24 18:47:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 18:47:01] mff2104.farm.particle.cz
[2025-05-24 18:47:01] apptainer works
[2025-05-24 18:47:01] Set ATHENA_PROC_NUMBER=12
[2025-05-24 18:47:01] Set ATHENA_CORE_NUMBER=12
[2025-05-24 18:47:01] Starting ATLAS job with PandaID=6665266563
[2025-05-24 18:47:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 21:07:19]  *** The last 200 lines of the pilot log: ***
[2025-05-24 21:07:19] 2025-05-24 18:53:26,290 | INFO     | mean x: 1748109291.754386
[2025-05-24 21:07:19] 2025-05-24 18:53:26,290 | INFO     | mean y: 2649020.5614035088
[2025-05-24 21:07:19] 2025-05-24 18:53:26,290 | INFO     | -- intersect: -55362252034.47744
[2025-05-24 21:07:19] 2025-05-24 18:53:26,290 | INFO     | intersect: -55362252034.47744
[2025-05-24 21:07:19] 2025-05-24 18:53:26,291 | INFO     | chi2: 1.1780317511113705
[2025-05-24 21:07:19] 2025-05-24 18:53:26,291 | INFO     | current chi2=1.1780317511113705 (change=79.6592058169173 %)
[2025-05-24 21:07:19] 2025-05-24 18:53:26,291 | INFO     | sum of square deviations: 401489089.28440356
[2025-05-24 21:07:19] 2025-05-24 18:53:26,291 | INFO     | sum of deviations: -3779627739.3761463
[2025-05-24 21:07:19] 2025-05-24 18:53:26,291 | INFO     | mean x: 1748109444.266055
[2025-05-24 21:07:19] 2025-05-24 18:53:26,292 | INFO     | mean y: 2696778.357798165
[2025-05-24 21:07:19] 2025-05-24 18:53:26,292 | INFO     | -- intersect: 16459440245.010374
[2025-05-24 21:07:19] 2025-05-24 18:53:26,292 | INFO     | intersect: 16459440245.010374
[2025-05-24 21:07:19] 2025-05-24 18:53:26,292 | INFO     | chi2: 0.13213640684399677
[2025-05-24 21:07:19] 2025-05-24 18:53:26,292 | INFO     | current chi2=0.13213640684399677 (change=88.78328986299924 %)
[2025-05-24 21:07:19] 2025-05-24 18:53:26,292 | INFO     | sum of square deviations: 348716463.9134616
[2025-05-24 21:07:19] 2025-05-24 18:53:26,293 | INFO     | sum of deviations: -5117026629.37501
[2025-05-24 21:07:19] 2025-05-24 18:53:26,293 | INFO     | mean x: 1748109596.7788463
[2025-05-24 21:07:19] 2025-05-24 18:53:26,293 | INFO     | mean y: 2700399.375
[2025-05-24 21:07:19] 2025-05-24 18:53:26,293 | INFO     | -- intersect: 25654266308.816006
[2025-05-24 21:07:19] 2025-05-24 18:53:26,293 | INFO     | intersect: 25654266308.816006
[2025-05-24 21:07:19] 2025-05-24 18:53:26,293 | INFO     | chi2: 0.08976582427928073
[2025-05-24 21:07:19] 2025-05-24 18:53:26,293 | INFO     | current chi2=0.08976582427928073 (change=32.06578987329337 %)
[2025-05-24 21:07:19] 2025-05-24 18:53:26,293 | INFO     | sum of square deviations: 300781138.5050512
[2025-05-24 21:07:19] 2025-05-24 18:53:26,294 | INFO     | sum of deviations: -1413456107.8585844
[2025-05-24 21:07:19] 2025-05-24 18:53:26,294 | INFO     | mean x: 1748109749.2929294
[2025-05-24 21:07:19] 2025-05-24 18:53:26,294 | INFO     | mean y: 2688596.202020202
[2025-05-24 21:07:19] 2025-05-24 18:53:26,294 | INFO     | -- intersect: 8217553446.524857
[2025-05-24 21:07:19] 2025-05-24 18:53:26,294 | INFO     | intersect: 8217553446.524857
[2025-05-24 21:07:19] 2025-05-24 18:53:26,294 | INFO     | chi2: 0.061851971932866553
[2025-05-24 21:07:19] 2025-05-24 18:53:26,294 | INFO     | current chi2=0.061851971932866553 (change=31.096302596819246 %)
[2025-05-24 21:07:19] 2025-05-24 18:53:26,294 | INFO     | sum of square deviations: 257468300.3085106
[2025-05-24 21:07:19] 2025-05-24 18:53:26,295 | INFO     | sum of deviations: 2829172251.7340426
[2025-05-24 21:07:19] 2025-05-24 18:53:26,295 | INFO     | mean x: 1748109901.7765958
[2025-05-24 21:07:19] 2025-05-24 18:53:26,295 | INFO     | mean y: 2673629.6063829786
[2025-05-24 21:07:19] 2025-05-24 18:53:26,295 | INFO     | -- intersect: -19206308684.57246
[2025-05-24 21:07:19] 2025-05-24 18:53:26,295 | INFO     | intersect: -19206308684.57246
[2025-05-24 21:07:19] 2025-05-24 18:53:26,295 | INFO     | chi2: 0.0012147295039900054
[2025-05-24 21:07:19] 2025-05-24 18:53:26,295 | INFO     | current chi2=0.0012147295039900054 (change=98.03606988422541 %)
[2025-05-24 21:07:19] 2025-05-24 18:53:26,295 | INFO     | sum of square deviations: 218533858.56179827
[2025-05-24 21:07:19] 2025-05-24 18:53:26,296 | INFO     | sum of deviations: 2329695769.4606743
[2025-05-24 21:07:19] 2025-05-24 18:53:26,296 | INFO     | mean x: 1748110054.247191
[2025-05-24 21:07:19] 2025-05-24 18:53:26,296 | INFO     | mean y: 2675584.842696629
[2025-05-24 21:07:19] 2025-05-24 18:53:26,296 | INFO     | -- intersect: -18633176199.10266
[2025-05-24 21:07:19] 2025-05-24 18:53:26,296 | INFO     | intersect: -18633176199.10266
[2025-05-24 21:07:19] 2025-05-24 18:53:26,296 | INFO     | chi2: 0.001190767602440276
[2025-05-24 21:07:19] 2025-05-24 18:53:26,296 | INFO     | current chi2=0.001190767602440276 (change=1.9726121306037392 %)
[2025-05-24 21:07:19] 2025-05-24 18:53:26,296 | INFO     | left removable region: 60
[2025-05-24 21:07:19] 2025-05-24 18:53:26,297 | INFO     | sum of square deviations: 46131503.283018894
[2025-05-24 21:07:19] 2025-05-24 18:53:26,297 | INFO     | sum of deviations: 535767157.264151
[2025-05-24 21:07:19] 2025-05-24 18:53:26,297 | INFO     | mean x: 1748110786.2264152
[2025-05-24 21:07:19] 2025-05-24 18:53:26,297 | INFO     | mean y: 2678602.8113207547
[2025-05-24 21:07:19] 2025-05-24 18:53:26,297 | INFO     | -- intersect: -20299723874.154644
[2025-05-24 21:07:19] 2025-05-24 18:53:26,297 | INFO     | intersect: -20299723874.154644
[2025-05-24 21:07:19] 2025-05-24 18:53:26,297 | INFO     | chi2: 0.00044279566479473305
[2025-05-24 21:07:19] 2025-05-24 18:53:26,297 | INFO     | -- intersect: -20299723874.154644
[2025-05-24 21:07:19] 2025-05-24 18:53:26,297 | INFO     | current memory leak: 11.61 B/s (using 53 data points, chi2=0.00)
[2025-05-24 21:07:19] 2025-05-24 18:53:26,298 | INFO     | ..............................
[2025-05-24 21:07:19] 2025-05-24 18:53:26,298 | INFO     | . Timing measurements:
[2025-05-24 21:07:19] 2025-05-24 18:53:26,298 | INFO     | . get job = 0 s
[2025-05-24 21:07:19] 2025-05-24 18:53:26,298 | INFO     | . initial setup = 8 s
[2025-05-24 21:07:19] 2025-05-24 18:53:26,298 | INFO     | . payload setup = 89 s
[2025-05-24 21:07:19] 2025-05-24 18:53:26,298 | INFO     | . stage-in = 0 s
[2025-05-24 21:07:19] 2025-05-24 18:53:26,298 | INFO     | . payload execution = 7287 s
[2025-05-24 21:07:19] 2025-05-24 18:53:26,298 | INFO     | . stage-out = 0 s
[2025-05-24 21:07:19] 2025-05-24 18:53:26,298 | INFO     | . log creation = 0 s
[2025-05-24 21:07:19] 2025-05-24 18:53:26,298 | INFO     | ..............................
[2025-05-24 21:07:19] 2025-05-24 18:53:26,387 | INFO     | 
[2025-05-24 21:07:19] 2025-05-24 18:53:26,387 | INFO     | job summary report
[2025-05-24 21:07:19] 2025-05-24 18:53:26,387 | INFO     | --------------------------------------------------
[2025-05-24 21:07:19] 2025-05-24 18:53:26,387 | INFO     | PanDA job id: 6665266563
[2025-05-24 21:07:19] 2025-05-24 18:53:26,387 | INFO     | task id: 44871837
[2025-05-24 21:07:19] 2025-05-24 18:53:26,387 | INFO     | errors: (none)
[2025-05-24 21:07:19] 2025-05-24 18:53:26,387 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 21:07:19] 2025-05-24 18:53:26,387 | INFO     | pilot state: finished 
[2025-05-24 21:07:19] 2025-05-24 18:53:26,388 | INFO     | transexitcode: 0
[2025-05-24 21:07:19] 2025-05-24 18:53:26,388 | INFO     | exeerrorcode: 0
[2025-05-24 21:07:19] 2025-05-24 18:53:26,388 | INFO     | exeerrordiag: 
[2025-05-24 21:07:19] 2025-05-24 18:53:26,388 | INFO     | exitcode: 0
[2025-05-24 21:07:19] 2025-05-24 18:53:26,388 | INFO     | exitmsg: OK
[2025-05-24 21:07:19] 2025-05-24 18:53:26,388 | INFO     | cpuconsumptiontime: 47412 s
[2025-05-24 21:07:19] 2025-05-24 18:53:26,388 | INFO     | nevents: 400
[2025-05-24 21:07:19] 2025-05-24 18:53:26,388 | INFO     | neventsw: 0
[2025-05-24 21:07:19] 2025-05-24 18:53:26,388 | INFO     | pid: 3427053
[2025-05-24 21:07:19] 2025-05-24 18:53:26,388 | INFO     | pgrp: 3427053
[2025-05-24 21:07:19] 2025-05-24 18:53:26,388 | INFO     | corecount: 12
[2025-05-24 21:07:19] 2025-05-24 18:53:26,388 | INFO     | event service: False
[2025-05-24 21:07:19] 2025-05-24 18:53:26,388 | INFO     | sizes: {0: 2393566, 1: 2393765, 2: 2393765, 12: 2393793, 23: 2393821, 34: 2393849, 45: 2394005, 46: 2394239, 56: 2394267, 7380: 2421695, 7381: 2430638, 7382: 24309
[2025-05-24 21:07:19] 2025-05-24 18:53:26,388 | INFO     | --------------------------------------------------
[2025-05-24 21:07:19] 2025-05-24 18:53:26,388 | INFO     | 
[2025-05-24 21:07:19] 2025-05-24 18:53:26,389 | INFO     | executing command: ls -lF /scratch/.boinc/slots/2
[2025-05-24 21:07:19] 2025-05-24 18:53:26,414 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 21:07:19] 2025-05-24 18:53:26,414 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 21:07:19] 2025-05-24 18:53:26,414 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 21:07:19] 2025-05-24 18:53:26,414 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 21:07:19] 2025-05-24 18:53:26,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 21:07:19] 2025-05-24 18:53:26,415 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 21:07:19] 2025-05-24 18:53:26,415 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 21:07:19] 2025-05-24 18:53:26,415 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 21:07:19] 2025-05-24 18:53:26,415 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 21:07:19] 2025-05-24 18:53:26,415 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 21:07:19] 2025-05-24 18:53:26,415 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 21:07:19] 2025-05-24 18:53:26,415 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 21:07:19] 2025-05-24 18:53:26,415 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 21:07:19] 2025-05-24 18:53:26,415 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 21:07:19] 2025-05-24 18:53:26,415 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 21:07:19] 2025-05-24 18:53:26,415 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 21:07:19] 2025-05-24 18:53:26,415 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 21:07:19] 2025-05-24 18:53:26,415 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 21:07:19] 2025-05-24 18:53:26,416 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 21:07:19] 2025-05-24 18:53:26,416 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 21:07:19] 2025-05-24 18:53:26,416 | INFO     | job 6665266563 has completed (purged errors)
[2025-05-24 21:07:19] 2025-05-24 18:53:26,416 | INFO     | overall cleanup function is called
[2025-05-24 21:07:19] 2025-05-24 18:53:27,425 | INFO     | --- collectZombieJob: --- 10, [3427053]
[2025-05-24 21:07:19] 2025-05-24 18:53:27,425 | INFO     | zombie collector waiting for pid 3427053
[2025-05-24 21:07:19] 2025-05-24 18:53:27,425 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 21:07:19] 2025-05-24 18:53:27,425 | INFO     | collected zombie processes
[2025-05-24 21:07:19] 2025-05-24 18:53:27,425 | INFO     | will attempt to kill all subprocesses of pid=3427053
[2025-05-24 21:07:19] 2025-05-24 18:53:27,998 | INFO     | process IDs to be killed: [3427053] (in reverse order)
[2025-05-24 21:07:19] 2025-05-24 18:53:28,192 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 21:07:19] 2025-05-24 18:53:28,194 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 21:07:19] 2025-05-24 18:53:28,218 | INFO     | did not find any defunct processes belonging to 3427053
[2025-05-24 21:07:19] 2025-05-24 18:53:28,241 | INFO     | did not find any defunct processes belonging to 3427053
[2025-05-24 21:07:19] 2025-05-24 18:53:28,242 | INFO     | ready for new job
[2025-05-24 21:07:19] 2025-05-24 18:53:28,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 21:07:19] 2025-05-24 18:53:28,244 | INFO     | **************************************
[2025-05-24 21:07:19] 2025-05-24 18:53:28,244 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 21:07:19] 2025-05-24 18:53:28,244 | INFO     | **************************************
[2025-05-24 21:07:19] 2025-05-24 18:53:28,244 | INFO     | 
[2025-05-24 21:07:19] 2025-05-24 18:53:28,249 | INFO     | architecture information:
[2025-05-24 21:07:19] 2025-05-24 18:53:28,249 | INFO     | executing command: cat /etc/os-release
[2025-05-24 21:07:19] 2025-05-24 18:53:28,268 | INFO     | cat /etc/os-release:
[2025-05-24 21:07:19] NAME="CentOS Linux"
[2025-05-24 21:07:19] VERSION="7 (Core)"
[2025-05-24 21:07:19] ID="centos"
[2025-05-24 21:07:19] ID_LIKE="rhel fedora"
[2025-05-24 21:07:19] VERSION_ID="7"
[2025-05-24 21:07:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 21:07:19] ANSI_COLOR="0;31"
[2025-05-24 21:07:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 21:07:19] HOME_URL="https://www.centos.org/"
[2025-05-24 21:07:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 21:07:19] 
[2025-05-24 21:07:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 21:07:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 21:07:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 21:07:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 21:07:19] 
[2025-05-24 21:07:19] 2025-05-24 18:53:28,268 | INFO     | **************************************
[2025-05-24 21:07:19] 2025-05-24 18:53:28,771 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2025-05-24 21:07:19] 2025-05-24 18:53:28,791 | INFO     | sufficient remaining disk space (1485380255744 B)
[2025-05-24 21:07:19] 2025-05-24 18:53:28,791 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 21:07:19] 2025-05-24 18:53:28,791 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 21:07:19] 2025-05-24 18:53:28,791 | INFO     | update_server=False
[2025-05-24 21:07:19] 2025-05-24 18:53:28,791 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 21:07:19] 2025-05-24 18:53:29,129 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-24 21:07:19] 2025-05-24 18:53:29,129 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-24 21:07:19] 2025-05-24 18:53:29,129 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 21:07:19] 2025-05-24 18:53:29,129 | INFO     | will abort loop
[2025-05-24 21:07:19] 2025-05-24 18:53:29,166 | INFO     | all data control threads have been joined
[2025-05-24 21:07:19] 2025-05-24 18:53:29,167 | INFO     | all payload control threads have been joined
[2025-05-24 21:07:19] 2025-05-24 18:53:29,345 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 21:07:19] 2025-05-24 18:53:29,345 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 21:07:19] 2025-05-24 18:53:29,347 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 21:07:19] 2025-05-24 18:53:29,668 | INFO     | all job control threads have been joined
[2025-05-24 21:07:19] 2025-05-24 18:53:29,796 | INFO     | [job] retrieve thread has finished
[2025-05-24 21:07:19] 2025-05-24 18:53:29,826 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 21:07:19] 2025-05-24 18:53:29,895 | INFO     | [job] validate thread has finished
[2025-05-24 21:07:19] 2025-05-24 18:53:30,134 | INFO     | [job] job monitor thread has finished
[2025-05-24 21:07:19] 2025-05-24 18:53:30,147 | INFO     | [data] copytool_in thread has finished
[2025-05-24 21:07:19] 2025-05-24 18:53:30,171 | INFO     | [data] control thread has finished
[2025-05-24 21:07:19] 2025-05-24 18:53:30,172 | INFO     | [payload] control thread has finished
[2025-05-24 21:07:19] 2025-05-24 18:53:30,215 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 21:07:19] 2025-05-24 18:53:30,328 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 21:07:19] 2025-05-24 18:53:30,379 | INFO     | [payload] failed_post thread has finished
[2025-05-24 21:07:19] 2025-05-24 18:53:30,500 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 21:07:19] 2025-05-24 18:53:30,673 | INFO     | [job] control thread has finished
[2025-05-24 21:07:19] 2025-05-24 18:53:30,877 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 21:07:19] 2025-05-24 18:53:31,121 | INFO     | [payload] validate_post thread has finished
[2025-05-24 21:07:19] 2025-05-24 18:53:31,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 21:07:19] 2025-05-24 18:53:32,220 | INFO     | [data] copytool_out thread has finished
[2025-05-24 21:07:19] 2025-05-24 18:53:32,281 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 21:07:19] 2025-05-24 18:53:32,401 | INFO     | [job] queue monitor thread has finished
[2025-05-24 21:07:19] 2025-05-24 18:53:36,287 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 21:07:19] 2025-05-24 18:53:36,844 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139620940130112)>', '<ExcThread(monitor, started 139620318701312)>']
[2025-05-24 21:07:19] 2025-05-24 18:53:37,387 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 21:07:19] 2025-05-24 18:53:37,387 | INFO     | [monitor] control thread has ended
[2025-05-24 21:07:19] 2025-05-24 18:53:41,869 | INFO     | all workflow threads have been joined
[2025-05-24 21:07:19] 2025-05-24 18:53:41,869 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 21:07:19] 2025-05-24 18:53:41,869 | INFO     | traces error code: 0
[2025-05-24 21:07:19] 2025-05-24 18:53:41,869 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 21:07:19] 2025-05-24 18:53:42,029 [wrapper] ==== pilot stdout END ====
[2025-05-24 21:07:19] 2025-05-24 18:53:42,037 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 21:07:19] 2025-05-24 18:53:42,041 [wrapper] pilotpid: 3389648
[2025-05-24 21:07:19] 2025-05-24 18:53:42,056 [wrapper] Pilot exit status: 0
[2025-05-24 21:07:19] 2025-05-24 18:53:42,139 [wrapper] pandaids: 6665266563
[2025-05-24 21:07:19] 2025-05-24 18:53:42,307 [wrapper] cleanup supervisor_pilot 4037218 3389649
[2025-05-24 21:07:19] 2025-05-24 18:53:42,310 [wrapper] Test setup, not cleaning
[2025-05-24 21:07:19] 2025-05-24 18:53:42,314 [wrapper] apfmon messages muted
[2025-05-24 21:07:19] 2025-05-24 18:53:42,317 [wrapper] ==== wrapper stdout END ====
[2025-05-24 21:07:19] 2025-05-24 18:53:42,325 [wrapper] ==== wrapper stderr END ====
[2025-05-24 21:07:19]  *** Error codes and diagnostics ***
[2025-05-24 21:07:19]     "exeErrorCode": 0,
[2025-05-24 21:07:19]     "exeErrorDiag": "",
[2025-05-24 21:07:19]     "pilotErrorCode": 0,
[2025-05-24 21:07:19]     "pilotErrorDiag": "",
[2025-05-24 21:07:19]  *** Listing of results directory ***
[2025-05-24 21:07:19] total 411468
[2025-05-24 21:07:19] -rw-r--r-- 1 boinc boinc    495897 May 24 07:59 pilot3.tar.gz
[2025-05-24 21:07:19] -rw-r--r-- 1 boinc boinc      5111 May 24 08:03 queuedata.json
[2025-05-24 21:07:19] -rwx------ 1 boinc boinc     37140 May 24 08:03 runpilot2-wrapper.sh
[2025-05-24 21:07:19] -rw-r--r-- 1 boinc boinc       100 May 24 18:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 21:07:19] -rwxr-xr-x 1 boinc boinc      7986 May 24 18:42 run_atlas
[2025-05-24 21:07:19] -rw-r--r-- 1 boinc boinc       105 May 24 18:42 job.xml
[2025-05-24 21:07:19] -rw-r--r-- 2 boinc boinc 221130902 May 24 18:42 EVNT.44871834._000238.pool.root.1
[2025-05-24 21:07:19] -rw-r--r-- 1 boinc boinc      6654 May 24 18:42 init_data.xml
[2025-05-24 21:07:19] -rw-r--r-- 2 boinc boinc    508872 May 24 18:42 input.tar.gz
[2025-05-24 21:07:19] -rw-r--r-- 2 boinc boinc     15093 May 24 18:42 start_atlas.sh
[2025-05-24 21:07:19] drwxrwx--x 2 boinc boinc      4096 May 24 18:42 shared
[2025-05-24 21:07:19] -rw-r--r-- 1 boinc boinc         0 May 24 18:42 boinc_lockfile
[2025-05-24 21:07:19] -rw-r--r-- 1 boinc boinc      2557 May 24 18:47 pandaJob.out
[2025-05-24 21:07:19] -rw------- 1 boinc boinc    988572 May 24 18:48 agis_schedconf.cvmfs.json
[2025-05-24 21:07:19] -rw------- 1 boinc boinc   1596740 May 24 18:48 agis_ddmendpoints.agis.ALL.json
[2025-05-24 21:07:19] drwx------ 4 boinc boinc      4096 May 24 18:48 pilot3
[2025-05-24 21:07:19] -rw------- 1 boinc boinc 194268361 May 24 20:52 HITS.44871837._005932.pool.root.1
[2025-05-24 21:07:19] -rw------- 1 boinc boinc        95 May 24 20:52 pilot_heartbeat.json
[2025-05-24 21:07:19] -rw-r--r-- 1 boinc boinc       528 May 24 20:52 boinc_task_state.xml
[2025-05-24 21:07:19] -rw------- 1 boinc boinc      1015 May 24 20:53 memory_monitor_summary.json
[2025-05-24 21:07:19] -rw------- 1 boinc boinc    380754 May 24 20:53 log.44871837._005932.job.log.tgz.1
[2025-05-24 21:07:19] -rw------- 1 boinc boinc      7681 May 24 20:53 heartbeat.json
[2025-05-24 21:07:19] -rw------- 1 boinc boinc      4542 May 24 20:53 pilotlog.txt
[2025-05-24 21:07:19] -rw------- 1 boinc boinc    674841 May 24 20:53 log.44871837._005932.job.log.1
[2025-05-24 21:07:19] -rw------- 1 boinc boinc       357 May 24 20:53 output.list
[2025-05-24 21:07:19] -rw-r--r-- 1 boinc boinc       620 May 24 20:53 runtime_log
[2025-05-24 21:07:19] -rw------- 1 boinc boinc   1075200 May 24 20:53 result.tar.gz
[2025-05-24 21:07:19] -rw-r--r-- 1 boinc boinc      8720 May 24 20:53 runtime_log.err
[2025-05-24 21:07:19] -rw------- 1 boinc boinc       663 May 24 20:53 pvmMDmX9wc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYZLKDm2Xp5Wm.diag
[2025-05-24 21:07:19] -rw-r--r-- 1 boinc boinc        25 May 24 21:07 wrapper_checkpoint.txt
[2025-05-24 21:07:19] -rw-r--r-- 1 boinc boinc      8192 May 24 21:07 boinc_mmap_file
[2025-05-24 21:07:19] -rw-r--r-- 1 boinc boinc     20950 May 24 21:07 stderr.txt
[2025-05-24 21:07:19] HITS file was successfully produced:
[2025-05-24 21:07:19] -rw------- 1 boinc boinc 194268361 May 24 20:52 shared/HITS.pool.root.1
[2025-05-24 21:07:19]  *** Contents of shared directory: ***
[2025-05-24 21:07:19] total 407244
[2025-05-24 21:07:19] -rw-r--r-- 2 boinc boinc 221130902 May 24 18:42 ATLAS.root_0
[2025-05-24 21:07:19] -rw-r--r-- 2 boinc boinc    508872 May 24 18:42 input.tar.gz
[2025-05-24 21:07:19] -rw-r--r-- 2 boinc boinc     15093 May 24 18:42 start_atlas.sh
[2025-05-24 21:07:19] -rw------- 1 boinc boinc 194268361 May 24 20:52 HITS.pool.root.1
[2025-05-24 21:07:19] -rw------- 1 boinc boinc   1075200 May 24 20:53 result.tar.gz
21:07:20 (3345187): run_atlas exited; CPU time 47765.488506
21:07:20 (3345187): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN