Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-24 05:01:42 (33028): Detected: vboxwrapper 26206
2025-05-24 05:01:42 (33028): Detected: BOINC client v8.0.2
2025-05-24 05:01:43 (33028): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-05-24 05:01:43 (33028): Successfully copied 'init_data.xml' to the shared directory.
2025-05-24 05:01:43 (33028): Create VM. (boinc_ca3e5e044533abc7, slot#9)
2025-05-24 05:01:44 (33028): Setting Memory Size for VM. (4800MB)
2025-05-24 05:01:44 (33028): Setting CPU Count for VM. (8)
2025-05-24 05:01:44 (33028): Setting Chipset Options for VM.
2025-05-24 05:01:45 (33028): Setting Graphics Controller Options for VM.
2025-05-24 05:01:45 (33028): Setting Boot Options for VM.
2025-05-24 05:01:45 (33028): Setting Network Configuration for NAT.
2025-05-24 05:01:45 (33028): Enabling VM Network Access.
2025-05-24 05:01:46 (33028): Disabling USB Support for VM.
2025-05-24 05:01:46 (33028): Disabling COM Port Support for VM.
2025-05-24 05:01:46 (33028): Disabling LPT Port Support for VM.
2025-05-24 05:01:46 (33028): Disabling Audio Support for VM.
2025-05-24 05:01:47 (33028): Disabling Clipboard Support for VM.
2025-05-24 05:01:47 (33028): Disabling Drag and Drop Support for VM.
2025-05-24 05:01:47 (33028): Adding storage controller(s) to VM.
2025-05-24 05:01:47 (33028): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-24 05:01:48 (33028): Adding VirtualBox Guest Additions to VM.
2025-05-24 05:01:48 (33028): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-24 05:01:48 (33028): forwarding host port 60291 to guest port 80
2025-05-24 05:01:49 (33028): Enabling remote desktop for VM.
2025-05-24 05:01:49 (33028): Required extension pack not installed, remote desktop not enabled.
2025-05-24 05:01:49 (33028): Enabling shared directory for VM.
2025-05-24 05:01:50 (33028): Starting VM using VBoxManage interface. (boinc_ca3e5e044533abc7, slot#9)
2025-05-24 05:01:54 (33028): Successfully started VM. (PID = '34880')
2025-05-24 05:01:54 (33028): Reporting VM Process ID to BOINC.
2025-05-24 05:01:54 (33028): Guest Log: BIOS: VirtualBox 7.1.4
2025-05-24 05:01:54 (33028): Guest Log: CPUID EDX: 0x178bfbff
2025-05-24 05:01:54 (33028): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-24 05:01:54 (33028): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-24 05:01:54 (33028): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-24 05:01:54 (33028): Detected: Web Application Enabled (http://localhost:60291)
2025-05-24 05:01:54 (33028): Preference change detected
2025-05-24 05:01:54 (33028): Setting CPU throttle for VM. (100%)
2025-05-24 05:01:54 (33028): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-24 05:01:56 (33028): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-24 05:01:56 (33028): Guest Log: BIOS: Booting from Hard Disk...
2025-05-24 05:01:59 (33028): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-24 05:01:59 (33028): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-24 05:01:59 (33028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-24 05:02:06 (33028): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-24 05:02:06 (33028): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-24 05:02:11 (33028): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-24 05:02:11 (33028): Guest Log: 00:00:00.000104 main     Log opened 2025-05-24T05:02:09.582987000Z
2025-05-24 05:02:11 (33028): Guest Log: 00:00:00.000197 main     OS Product: Linux
2025-05-24 05:02:11 (33028): Guest Log: 00:00:00.000237 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-24 05:02:11 (33028): Guest Log: 00:00:00.000262 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-24 05:02:11 (33028): Guest Log: 00:00:00.000279 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-24 05:02:11 (33028): Guest Log: 00:00:00.000280 main     Process ID: 1373
2025-05-24 05:02:11 (33028): Guest Log: 00:00:00.000280 main     Package type: LINUX_64BITS_GENERIC
2025-05-24 05:02:11 (33028): Guest Log: 00:00:00.000773 main     5.2.32 r132073 started. Verbose level = 0
2025-05-24 05:02:11 (33028): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-24 05:02:11 (33028): Guest Log: [INFO] Mounting shared directory
2025-05-24 05:02:11 (33028): Guest Log: [INFO] Checking for init_data.xml
2025-05-24 05:02:17 (33028): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-24 05:02:17 (33028): Guest Log: [INFO] Detected branch: prod
2025-05-24 05:02:17 (33028): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-24 05:02:17 (33028): Guest Log: Copying input files
2025-05-24 05:02:18 (33028): Guest Log: Copied input files into RunAtlas.
2025-05-24 05:02:18 (33028): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-24 05:02:18 (33028): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-24 05:02:18 (33028): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-24 05:02:18 (33028): Guest Log: Further information can be found at the LHC@home message board.
2025-05-24 05:02:21 (33028): Guest Log: 00:00:10.035375 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 832 894 000ns (GuestNow=1 748 077 341 420 055 000 ns GuestLast=1 748 062 929 587 161 000 ns fSetTimeLastLoop=true )
2025-05-24 05:02:34 (33028): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-24 05:02:34 (33028): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-24 05:02:34 (33028): Guest Log: 2.6.3.0 1654 0 32100 146360 4 1 3117617 4096000 0 65024 0 0 n/a 1 2 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-24 05:02:34 (33028): Guest Log: copied the webapp to /var/www
2025-05-24 05:02:34 (33028): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-24 05:02:34 (33028): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-24 05:02:35 (33028): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-24 05:02:35 (33028): Guest Log:  *** Starting ATLAS job. (PandaID=6665211481 taskID=44871837) ***
2025-05-24 06:42:14 (33028): Status Report: Elapsed Time: '6000.000000'
2025-05-24 06:42:14 (33028): Status Report: CPU Time: '39420.140625'
2025-05-24 07:29:48 (33028): Guest Log:  *** Job finished ***
2025-05-24 07:29:48 (33028): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-24 07:29:48 (33028): Guest Log: 2025-05-24 11:29:33,440 | INFO     | [data] queue_monitor thread has finished
2025-05-24 07:29:48 (33028): Guest Log: 2025-05-24 11:29:37,356 | INFO     | job.realtimelogging is not enabled
2025-05-24 07:29:48 (33028): Guest Log: 2025-05-24 11:29:38,374 | INFO     | [payload] run_realtimelog thread has finished
2025-05-24 07:29:48 (33028): Guest Log: 2025-05-24 11:29:38,441 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140690265843520)>', '<ExcThread(monitor, started 140689664878336)>']
2025-05-24 07:29:48 (33028): Guest Log: 2025-05-24 11:29:39,238 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-24 07:29:48 (33028): Guest Log: 2025-05-24 11:29:39,239 | INFO     | [monitor] control thread has ended
2025-05-24 07:29:48 (33028): Guest Log: 2025-05-24 11:29:43,447 | INFO     | all workflow threads have been joined
2025-05-24 07:29:48 (33028): Guest Log: 2025-05-24 11:29:43,448 | INFO     | end of generic workflow (traces error code: 0)
2025-05-24 07:29:48 (33028): Guest Log: 2025-05-24 11:29:43,448 | INFO     | traces error code: 0
2025-05-24 07:29:48 (33028): Guest Log: 2025-05-24 11:29:43,448 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-24 07:29:48 (33028): Guest Log: 2025-05-24 11:29:43,592 [wrapper] ==== pilot stdout END ====
2025-05-24 07:29:48 (33028): Guest Log: 2025-05-24 11:29:43,600 [wrapper] ==== wrapper stdout RESUME ====
2025-05-24 07:29:48 (33028): Guest Log: 2025-05-24 11:29:43,607 [wrapper] pilotpid: 5988
2025-05-24 07:29:48 (33028): Guest Log: 2025-05-24 11:29:43,613 [wrapper] Pilot exit status: 0
2025-05-24 07:29:48 (33028): Guest Log: 2025-05-24 11:29:43,685 [wrapper] pandaids: 6665211481
2025-05-24 07:29:48 (33028): Guest Log: 2025-05-24 11:29:43,721 [wrapper] cleanup supervisor_pilot  7433 5989
2025-05-24 07:29:48 (33028): Guest Log: 2025-05-24 11:29:43,727 [wrapper] Test setup, not cleaning
2025-05-24 07:29:48 (33028): Guest Log: 2025-05-24 11:29:43,733 [wrapper] apfmon messages muted
2025-05-24 07:29:48 (33028): Guest Log: 2025-05-24 11:29:43,743 [wrapper] ==== wrapper stdout END ====
2025-05-24 07:29:48 (33028): Guest Log: 2025-05-24 11:29:43,749 [wrapper] ==== wrapper stderr END ====
2025-05-24 07:29:48 (33028): Guest Log:  *** Error codes and diagnostics ***
2025-05-24 07:29:48 (33028): Guest Log:     "exeErrorCode": 0,
2025-05-24 07:29:48 (33028): Guest Log:     "exeErrorDiag": "",
2025-05-24 07:29:48 (33028): Guest Log:     "pilotErrorCode": 0,
2025-05-24 07:29:48 (33028): Guest Log:     "pilotErrorDiag": "",
2025-05-24 07:29:48 (33028): Guest Log:  *** Listing of results directory ***
2025-05-24 07:29:48 (33028): Guest Log: total 196936
2025-05-24 07:29:48 (33028): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 24 05:01 pilot3.tar.gz
2025-05-24 07:29:48 (33028): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 24 05:28 queuedata.json
2025-05-24 07:29:48 (33028): Guest Log: -rwx------. 1 atlas atlas     37140 May 24 05:28 runpilot2-wrapper.sh
2025-05-24 07:29:48 (33028): Guest Log: -rwxr-xr-x. 1 atlas atlas    508871 May 24 09:02 input.tar.gz
2025-05-24 07:29:48 (33028): Guest Log: -rwxr-xr-x. 1 atlas atlas      8962 May 24 09:02 init_data.xml
2025-05-24 07:29:48 (33028): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 24 09:02 start_atlas.sh
2025-05-24 07:29:48 (33028): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 24 09:02 EVNT.44871834._000225.pool.root.1 -> /data/./ATLAS.root_0
2025-05-24 07:29:48 (33028): Guest Log: -rw-r--r--. 1 atlas atlas      2556 May 24 09:02 pandaJob.out
2025-05-24 07:29:48 (33028): Guest Log: -rw-------. 1 atlas atlas    988612 May 24 09:03 agis_schedconf.cvmfs.json
2025-05-24 07:29:48 (33028): Guest Log: -rw-------. 1 atlas atlas   1596740 May 24 09:03 agis_ddmendpoints.agis.ALL.json
2025-05-24 07:29:48 (33028): Guest Log: drwx------. 4 atlas atlas      4096 May 24 09:03 pilot3
2025-05-24 07:29:48 (33028): Guest Log: -rw-------. 1 atlas atlas 195746025 May 24 11:28 HITS.44871837._005617.pool.root.1
2025-05-24 07:29:48 (33028): Guest Log: -rw-------. 1 atlas atlas      1020 May 24 11:28 memory_monitor_summary.json
2025-05-24 07:29:48 (33028): Guest Log: -rw-------. 1 atlas atlas    339635 May 24 11:28 log.44871837._005617.job.log.tgz.1
2025-05-24 07:29:48 (33028): Guest Log: -rw-------. 1 atlas atlas        95 May 24 11:28 pilot_heartbeat.json
2025-05-24 07:29:48 (33028): Guest Log: -rw-------. 1 atlas atlas      7615 May 24 11:29 heartbeat.json
2025-05-24 07:29:48 (33028): Guest Log: -rw-------. 1 atlas atlas      4924 May 24 11:29 pilotlog.txt
2025-05-24 07:29:48 (33028): Guest Log: -rw-------. 1 atlas atlas    737615 May 24 11:29 log.44871837._005617.job.log.1
2025-05-24 07:29:48 (33028): Guest Log: -rw-------. 1 atlas atlas       357 May 24 11:29 output.list
2025-05-24 07:29:48 (33028): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 24 11:29 runtime_log
2025-05-24 07:29:48 (33028): Guest Log: -rw-------. 1 atlas atlas   1095680 May 24 11:29 result.tar.gz
2025-05-24 07:29:48 (33028): Guest Log: -rw-------. 1 atlas atlas       670 May 24 11:29 ZdhMDmfbwc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhVLKDmuK4FKo.diag
2025-05-24 07:29:48 (33028): Guest Log: -rw-r--r--. 1 atlas atlas      8630 May 24 11:29 runtime_log.err
2025-05-24 07:29:48 (33028): Guest Log: Looking for outputfile HITS.44871837._005617.pool.root.1
2025-05-24 07:29:48 (33028): Guest Log: HITS file was successfully produced
2025-05-24 07:29:48 (33028): Guest Log: -rw-------. 1 atlas atlas 195746025 May 24 11:28 /home/atlas/RunAtlas/HITS.44871837._005617.pool.root.1
2025-05-24 07:29:49 (33028): Guest Log: Successfully finished the ATLAS job!
2025-05-24 07:29:49 (33028): Guest Log: Copying the results back to the shared directory!
2025-05-24 07:29:49 (33028): Guest Log:  *** Contents of shared directory: ***
2025-05-24 07:29:49 (33028): Guest Log: total 412784
2025-05-24 07:29:49 (33028): Guest Log: -rwxrwxrwx. 1 root root 225303862 May 24 09:01 ATLAS.root_0
2025-05-24 07:29:49 (33028): Guest Log: -rwxrwxrwx. 1 root root 195746025 May 24  2025 HITS.pool.root.1
2025-05-24 07:29:49 (33028): Guest Log: -rwxrwxrwx. 1 root root      8962 May 24 09:01 init_data.xml
2025-05-24 07:29:49 (33028): Guest Log: -rwxrwxrwx. 1 root root    508871 May 24 06:13 input.tar.gz
2025-05-24 07:29:49 (33028): Guest Log: -rwxrwxrwx. 1 root root   1095680 May 24  2025 result.tar.gz
2025-05-24 07:29:49 (33028): Guest Log: -rwxrwxrwx. 1 root root     15093 May 24 06:13 start_atlas.sh
2025-05-24 07:29:49 (33028): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-24 07:29:49 (33028): VM Completion File Detected.
2025-05-24 07:29:49 (33028): Powering off VM.
2025-05-24 07:29:50 (33028): Successfully stopped VM.
2025-05-24 07:29:50 (33028): Deregistering VM. (boinc_ca3e5e044533abc7, slot#9)
2025-05-24 07:29:50 (33028): Removing network bandwidth throttle group from VM.
2025-05-24 07:29:51 (33028): Removing VM from VirtualBox.
07:29:56 (33028): called boinc_finish(0)

</stderr_txt>
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