Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-24 01:43:20 (5800): Detected: vboxwrapper 26206
2025-05-24 01:43:20 (5800): Detected: BOINC client v8.0.4
2025-05-24 01:43:20 (5800): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-05-24 01:43:21 (5800): Successfully copied 'init_data.xml' to the shared directory.
2025-05-24 01:43:21 (5800): Create VM. (boinc_b86ccb589eefff32, slot#2)
2025-05-24 01:43:22 (5800): Setting Memory Size for VM. (4400MB)
2025-05-24 01:43:22 (5800): Setting CPU Count for VM. (4)
2025-05-24 01:43:22 (5800): Setting Chipset Options for VM.
2025-05-24 01:43:22 (5800): Setting Graphics Controller Options for VM.
2025-05-24 01:43:23 (5800): Setting Boot Options for VM.
2025-05-24 01:43:23 (5800): Setting Network Configuration for NAT.
2025-05-24 01:43:23 (5800): Enabling VM Network Access.
2025-05-24 01:43:23 (5800): Disabling USB Support for VM.
2025-05-24 01:43:24 (5800): Disabling COM Port Support for VM.
2025-05-24 01:43:24 (5800): Disabling LPT Port Support for VM.
2025-05-24 01:43:24 (5800): Disabling Audio Support for VM.
2025-05-24 01:43:24 (5800): Disabling Clipboard Support for VM.
2025-05-24 01:43:25 (5800): Disabling Drag and Drop Support for VM.
2025-05-24 01:43:25 (5800): Adding storage controller(s) to VM.
2025-05-24 01:43:25 (5800): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-24 01:43:26 (5800): Adding VirtualBox Guest Additions to VM.
2025-05-24 01:43:26 (5800): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-24 01:43:26 (5800): forwarding host port 51907 to guest port 80
2025-05-24 01:43:26 (5800): Enabling remote desktop for VM.
2025-05-24 01:43:27 (5800): Required extension pack not installed, remote desktop not enabled.
2025-05-24 01:43:27 (5800): Enabling shared directory for VM.
2025-05-24 01:43:27 (5800): Starting VM using VBoxManage interface. (boinc_b86ccb589eefff32, slot#2)
2025-05-24 01:43:32 (5800): Successfully started VM. (PID = '4492')
2025-05-24 01:43:32 (5800): Reporting VM Process ID to BOINC.
2025-05-24 01:43:32 (5800): Guest Log: BIOS: VirtualBox 7.1.6
2025-05-24 01:43:32 (5800): Guest Log: CPUID EDX: 0x178bfbff
2025-05-24 01:43:32 (5800): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-24 01:43:32 (5800): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-24 01:43:32 (5800): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-24 01:43:32 (5800): Detected: Web Application Enabled (http://localhost:51907)
2025-05-24 01:43:32 (5800): Preference change detected
2025-05-24 01:43:32 (5800): Setting CPU throttle for VM. (60%)
2025-05-24 01:43:33 (5800): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-24 01:43:34 (5800): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-24 01:43:34 (5800): Guest Log: BIOS: Booting from Hard Disk...
2025-05-24 01:43:37 (5800): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-24 01:43:37 (5800): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-24 01:43:37 (5800): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-24 01:43:45 (5800): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-24 01:43:45 (5800): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-24 01:43:54 (5800): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-24 01:43:54 (5800): Guest Log: 00:00:00.000105 main     Log opened 2025-05-24T01:43:51.891790000Z
2025-05-24 01:43:54 (5800): Guest Log: 00:00:00.000174 main     OS Product: Linux
2025-05-24 01:43:54 (5800): Guest Log: 00:00:00.000198 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-24 01:43:54 (5800): Guest Log: 00:00:00.000218 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-24 01:43:54 (5800): Guest Log: 00:00:00.000237 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-24 01:43:54 (5800): Guest Log: 00:00:00.000238 main     Process ID: 1308
2025-05-24 01:43:54 (5800): Guest Log: 00:00:00.000238 main     Package type: LINUX_64BITS_GENERIC
2025-05-24 01:43:54 (5800): Guest Log: 00:00:00.001089 main     5.2.32 r132073 started. Verbose level = 0
2025-05-24 01:43:54 (5800): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-24 01:43:54 (5800): Guest Log: [INFO] Mounting shared directory
2025-05-24 01:43:54 (5800): Guest Log: [INFO] Checking for init_data.xml
2025-05-24 01:43:57 (5800): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-24 01:43:57 (5800): Guest Log: [INFO] Detected branch: prod
2025-05-24 01:43:57 (5800): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-24 01:43:57 (5800): Guest Log: Copying input files
2025-05-24 01:43:59 (5800): Guest Log: Copied input files into RunAtlas.
2025-05-24 01:43:59 (5800): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-24 01:43:59 (5800): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-24 01:43:59 (5800): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-24 01:43:59 (5800): Guest Log: Further information can be found at the LHC@home message board.
2025-05-24 01:44:04 (5800): Guest Log: 00:00:10.004884 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 934 102 000ns (GuestNow=1 748 065 443 829 321 000 ns GuestLast=1 748 051 031 895 219 000 ns fSetTimeLastLoop=true )
2025-05-24 01:44:07 (5800): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-24 01:44:07 (5800): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-24 01:44:07 (5800): Guest Log: 2.6.3.0 1585 0 32152 146356 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-24 01:44:09 (5800): Guest Log: copied the webapp to /var/www
2025-05-24 01:44:09 (5800): Guest Log: ATHENA_PROC_NUMBER=4
2025-05-24 01:44:09 (5800): Guest Log: ATHENA_CORE_NUMBER=4
2025-05-24 01:44:09 (5800): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-24 01:44:09 (5800): Guest Log:  *** Starting ATLAS job. (PandaID=6665208578 taskID=44871837) ***
2025-05-24 03:23:37 (5800): Status Report: Elapsed Time: '6000.000000'
2025-05-24 03:23:37 (5800): Status Report: CPU Time: '13603.546875'
2025-05-24 05:03:41 (5800): Status Report: Elapsed Time: '12000.000000'
2025-05-24 05:03:41 (5800): Status Report: CPU Time: '28038.609375'
2025-05-24 06:26:13 (5800): Guest Log:  *** Job finished ***
2025-05-24 06:26:13 (5800): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-24 06:26:13 (5800): Guest Log: 2025-05-24 10:26:04,274 | INFO     | [payload] control thread has finished
2025-05-24 06:26:13 (5800): Guest Log: 2025-05-24 10:26:04,625 | INFO     | [data] copytool_out thread has finished
2025-05-24 06:26:13 (5800): Guest Log: 2025-05-24 10:26:07,451 | INFO     | [data] queue_monitor thread has finished
2025-05-24 06:26:13 (5800): Guest Log: 2025-05-24 10:26:07,538 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140684200793920)>', '<ExcThread(monitor, started 140683885123328)>']
2025-05-24 06:26:13 (5800): Guest Log: 2025-05-24 10:26:07,547 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-24 06:26:13 (5800): Guest Log: 2025-05-24 10:26:07,547 | INFO     | [monitor] control thread has ended
2025-05-24 06:26:13 (5800): Guest Log: 2025-05-24 10:26:12,544 | INFO     | all workflow threads have been joined
2025-05-24 06:26:13 (5800): Guest Log: 2025-05-24 10:26:12,544 | INFO     | end of generic workflow (traces error code: 0)
2025-05-24 06:26:13 (5800): Guest Log: 2025-05-24 10:26:12,545 | INFO     | traces error code: 0
2025-05-24 06:26:13 (5800): Guest Log: 2025-05-24 10:26:12,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-24 06:26:13 (5800): Guest Log: 2025-05-24 10:26:12,676 [wrapper] ==== pilot stdout END ====
2025-05-24 06:26:13 (5800): Guest Log: 2025-05-24 10:26:12,680 [wrapper] ==== wrapper stdout RESUME ====
2025-05-24 06:26:13 (5800): Guest Log: 2025-05-24 10:26:12,683 [wrapper] pilotpid: 5901
2025-05-24 06:26:13 (5800): Guest Log: 2025-05-24 10:26:12,686 [wrapper] Pilot exit status: 0
2025-05-24 06:26:13 (5800): Guest Log: 2025-05-24 10:26:12,739 [wrapper] pandaids: 6665208578
2025-05-24 06:26:13 (5800): Guest Log: 2025-05-24 10:26:12,766 [wrapper] cleanup supervisor_pilot 15315 5902
2025-05-24 06:26:13 (5800): Guest Log: 2025-05-24 10:26:12,769 [wrapper] Test setup, not cleaning
2025-05-24 06:26:13 (5800): Guest Log: 2025-05-24 10:26:12,775 [wrapper] apfmon messages muted
2025-05-24 06:26:13 (5800): Guest Log: 2025-05-24 10:26:12,779 [wrapper] ==== wrapper stdout END ====
2025-05-24 06:26:13 (5800): Guest Log: 2025-05-24 10:26:12,783 [wrapper] ==== wrapper stderr END ====
2025-05-24 06:26:13 (5800): Guest Log:  *** Error codes and diagnostics ***
2025-05-24 06:26:13 (5800): Guest Log:     "exeErrorCode": 0,
2025-05-24 06:26:13 (5800): Guest Log:     "exeErrorDiag": "",
2025-05-24 06:26:13 (5800): Guest Log:     "pilotErrorCode": 0,
2025-05-24 06:26:13 (5800): Guest Log:     "pilotErrorDiag": "",
2025-05-24 06:26:13 (5800): Guest Log:  *** Listing of results directory ***
2025-05-24 06:26:13 (5800): Guest Log: total 202620
2025-05-24 06:26:13 (5800): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 24 05:01 pilot3.tar.gz
2025-05-24 06:26:13 (5800): Guest Log: -rwx------. 1 atlas atlas     37140 May 24 05:05 runpilot2-wrapper.sh
2025-05-24 06:26:13 (5800): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 24 05:05 queuedata.json
2025-05-24 06:26:13 (5800): Guest Log: -rwxr-xr-x. 1 atlas atlas     12280 May 24 05:43 init_data.xml
2025-05-24 06:26:13 (5800): Guest Log: -rwxr-xr-x. 1 atlas atlas    508878 May 24 05:43 input.tar.gz
2025-05-24 06:26:13 (5800): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 24 05:43 start_atlas.sh
2025-05-24 06:26:13 (5800): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 24 05:43 EVNT.44871834._000180.pool.root.1 -> /data/./ATLAS.root_0
2025-05-24 06:26:13 (5800): Guest Log: -rw-r--r--. 1 atlas atlas      2557 May 24 05:44 pandaJob.out
2025-05-24 06:26:13 (5800): Guest Log: -rw-------. 1 atlas atlas    988612 May 24 05:44 agis_schedconf.cvmfs.json
2025-05-24 06:26:13 (5800): Guest Log: drwx------. 4 atlas atlas      4096 May 24 05:44 pilot3
2025-05-24 06:26:13 (5800): Guest Log: -rw-------. 1 atlas atlas 200687356 May 24 10:24 HITS.44871837._004483.pool.root.1
2025-05-24 06:26:13 (5800): Guest Log: -rw-------. 1 atlas atlas        95 May 24 10:25 pilot_heartbeat.json
2025-05-24 06:26:13 (5800): Guest Log: -rw-------. 1 atlas atlas      1034 May 24 10:25 memory_monitor_summary.json
2025-05-24 06:26:13 (5800): Guest Log: -rw-------. 1 atlas atlas   1596740 May 24 10:25 agis_ddmendpoints.agis.ALL.json
2025-05-24 06:26:13 (5800): Guest Log: -rw-------. 1 atlas atlas    324461 May 24 10:25 log.44871837._004483.job.log.tgz.1
2025-05-24 06:26:13 (5800): Guest Log: -rw-------. 1 atlas atlas      7697 May 24 10:25 heartbeat.json
2025-05-24 06:26:13 (5800): Guest Log: -rw-------. 1 atlas atlas      4722 May 24 10:26 pilotlog.txt
2025-05-24 06:26:13 (5800): Guest Log: -rw-------. 1 atlas atlas   1192211 May 24 10:26 log.44871837._004483.job.log.1
2025-05-24 06:26:13 (5800): Guest Log: -rw-------. 1 atlas atlas       357 May 24 10:26 output.list
2025-05-24 06:26:13 (5800): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 24 10:26 runtime_log
2025-05-24 06:26:13 (5800): Guest Log: -rw-------. 1 atlas atlas   1536000 May 24 10:26 result.tar.gz
2025-05-24 06:26:13 (5800): Guest Log: -rw-r--r--. 1 atlas atlas      8553 May 24 10:26 runtime_log.err
2025-05-24 06:26:13 (5800): Guest Log: -rw-------. 1 atlas atlas       647 May 24 10:26 83CNDmdFwc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQLLKDmxIxrwn.diag
2025-05-24 06:26:13 (5800): Guest Log: Looking for outputfile HITS.44871837._004483.pool.root.1
2025-05-24 06:26:13 (5800): Guest Log: HITS file was successfully produced
2025-05-24 06:26:13 (5800): Guest Log: -rw-------. 1 atlas atlas 200687356 May 24 10:24 /home/atlas/RunAtlas/HITS.44871837._004483.pool.root.1
2025-05-24 06:26:15 (5800): Guest Log: Successfully finished the ATLAS job!
2025-05-24 06:26:15 (5800): Guest Log: Copying the results back to the shared directory!
2025-05-24 06:26:15 (5800): Guest Log:  *** Contents of shared directory: ***
2025-05-24 06:26:15 (5800): Guest Log: total 419356
2025-05-24 06:26:15 (5800): Guest Log: -rwxrwxrwx. 1 root root 226655482 May 24 05:43 ATLAS.root_0
2025-05-24 06:26:15 (5800): Guest Log: -rwxrwxrwx. 1 root root 200687356 May 24 10:26 HITS.pool.root.1
2025-05-24 06:26:15 (5800): Guest Log: -rwxrwxrwx. 1 root root     12280 May 24 05:43 init_data.xml
2025-05-24 06:26:15 (5800): Guest Log: -rwxrwxrwx. 1 root root    508878 May 24 05:43 input.tar.gz
2025-05-24 06:26:15 (5800): Guest Log: -rwxrwxrwx. 1 root root   1536000 May 24 10:26 result.tar.gz
2025-05-24 06:26:15 (5800): Guest Log: -rwxrwxrwx. 1 root root     15093 May 24 05:43 start_atlas.sh
2025-05-24 06:26:15 (5800): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-24 06:26:16 (5800): VM Completion File Detected.
2025-05-24 06:26:16 (5800): Powering off VM.
2025-05-24 06:26:18 (5800): Successfully stopped VM.
2025-05-24 06:26:18 (5800): Deregistering VM. (boinc_b86ccb589eefff32, slot#2)
2025-05-24 06:26:18 (5800): Removing network bandwidth throttle group from VM.
2025-05-24 06:26:18 (5800): Removing VM from VirtualBox.
06:26:24 (5800): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN