Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:11:56 (12857): wrapper (7.7.26015): starting
08:11:56 (12857): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 08:11:56] Arguments: --nthreads 8
[2025-05-24 08:11:56] Threads: 8
[2025-05-24 08:11:56] Checking for CVMFS
[2025-05-24 08:11:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 08:11:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 08:11:57] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 08:11:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 08:11:58] 2.11.2.0 16148 16998 93464 146357 0 16 18891839 25165824 2833 130560 0 9724468 99.715 12413838 1571 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-24 08:11:58] CVMFS is ok
[2025-05-24 08:11:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 08:11:58] Checking for apptainer binary...
[2025-05-24 08:11:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 08:11:58] Running /usr/bin/apptainer --version
[2025-05-24 08:11:59] apptainer version 1.3.2-1.el7
[2025-05-24 08:11:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 08:18:28] cg-vwn372.simple-grid.lan
[2025-05-24 08:18:28] apptainer works
[2025-05-24 08:18:29] Set ATHENA_PROC_NUMBER=8
[2025-05-24 08:18:29] Set ATHENA_CORE_NUMBER=8
[2025-05-24 08:18:29] Starting ATLAS job with PandaID=6665207512
[2025-05-24 08:18:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 16:24:59]  *** The last 200 lines of the pilot log: ***
[2025-05-24 16:24:59] 2025-05-24 11:32:56,070 | INFO     | extracted standard info from prmon json
[2025-05-24 16:24:59] 2025-05-24 11:32:56,071 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 16:24:59] 2025-05-24 11:32:56,071 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 16:24:59] 2025-05-24 11:32:56,071 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 16:24:59] 2025-05-24 11:32:56,071 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 16:24:59] 2025-05-24 11:32:56,077 | INFO     | fitting pss+swap vs Time
[2025-05-24 16:24:59] 2025-05-24 11:32:56,078 | INFO     | sum of square deviations: 8288713550.0
[2025-05-24 16:24:59] 2025-05-24 11:32:56,081 | INFO     | sum of deviations: -40191660419.0
[2025-05-24 16:24:59] 2025-05-24 11:32:56,081 | INFO     | mean x: 1748077134.0
[2025-05-24 16:24:59] 2025-05-24 11:32:56,081 | INFO     | mean y: 2518700.9732441474
[2025-05-24 16:24:59] 2025-05-24 11:32:56,081 | INFO     | -- intersect: 8478879010.945201
[2025-05-24 16:24:59] 2025-05-24 11:32:56,081 | INFO     | intersect: 8478879010.945201
[2025-05-24 16:24:59] 2025-05-24 11:32:56,082 | INFO     | chi2: 2.5137908893372436
[2025-05-24 16:24:59] 2025-05-24 11:32:56,082 | INFO     | sum of square deviations: 7879803557.5
[2025-05-24 16:24:59] 2025-05-24 11:32:56,085 | INFO     | sum of deviations: -19408625407.0
[2025-05-24 16:24:59] 2025-05-24 11:32:56,085 | INFO     | mean x: 1748076981.5
[2025-05-24 16:24:59] 2025-05-24 11:32:56,085 | INFO     | mean y: 2526351.4217687077
[2025-05-24 16:24:59] 2025-05-24 11:32:56,086 | INFO     | -- intersect: 4308188423.954061
[2025-05-24 16:24:59] 2025-05-24 11:32:56,086 | INFO     | intersect: 4308188423.954061
[2025-05-24 16:24:59] 2025-05-24 11:32:56,086 | INFO     | chi2: 1.7428791514347004
[2025-05-24 16:24:59] 2025-05-24 11:32:56,086 | INFO     | current chi2=1.7428791514347004 (change=30.66729779205273 %)
[2025-05-24 16:24:59] 2025-05-24 11:32:56,087 | INFO     | sum of square deviations: 7484568240.0
[2025-05-24 16:24:59] 2025-05-24 11:32:56,090 | INFO     | sum of deviations: -18818251608.000004
[2025-05-24 16:24:59] 2025-05-24 11:32:56,090 | INFO     | mean x: 1748076829.0
[2025-05-24 16:24:59] 2025-05-24 11:32:56,090 | INFO     | mean y: 2526579.259515571
[2025-05-24 16:24:59] 2025-05-24 11:32:56,090 | INFO     | -- intersect: 4397669831.8029375
[2025-05-24 16:24:59] 2025-05-24 11:32:56,090 | INFO     | intersect: 4397669831.8029375
[2025-05-24 16:24:59] 2025-05-24 11:32:56,091 | INFO     | chi2: 1.7424308508934019
[2025-05-24 16:24:59] 2025-05-24 11:32:56,091 | INFO     | current chi2=1.7424308508934019 (change=0.025721837393573 %)
[2025-05-24 16:24:59] 2025-05-24 11:32:56,091 | INFO     | right removable region: 288
[2025-05-24 16:24:59] 2025-05-24 11:32:56,092 | INFO     | sum of square deviations: 7879803557.5
[2025-05-24 16:24:59] 2025-05-24 11:32:56,095 | INFO     | sum of deviations: -86723379994.0
[2025-05-24 16:24:59] 2025-05-24 11:32:56,095 | INFO     | mean x: 1748077286.5
[2025-05-24 16:24:59] 2025-05-24 11:32:56,095 | INFO     | mean y: 2535925.163265306
[2025-05-24 16:24:59] 2025-05-24 11:32:56,095 | INFO     | -- intersect: 19241488986.591778
[2025-05-24 16:24:59] 2025-05-24 11:32:56,095 | INFO     | intersect: 19241488986.591778
[2025-05-24 16:24:59] 2025-05-24 11:32:56,096 | INFO     | chi2: 1.0413983009998986
[2025-05-24 16:24:59] 2025-05-24 11:32:56,096 | INFO     | current chi2=1.0413983009998986 (change=58.572596256227925 %)
[2025-05-24 16:24:59] 2025-05-24 11:32:56,096 | INFO     | sum of square deviations: 7484568240.0
[2025-05-24 16:24:59] 2025-05-24 11:32:56,099 | INFO     | sum of deviations: -86946535867.0
[2025-05-24 16:24:59] 2025-05-24 11:32:56,099 | INFO     | mean x: 1748077439.0
[2025-05-24 16:24:59] 2025-05-24 11:32:56,099 | INFO     | mean y: 2535991.982698962
[2025-05-24 16:24:59] 2025-05-24 11:32:56,100 | INFO     | -- intersect: 20309556099.839584
[2025-05-24 16:24:59] 2025-05-24 11:32:56,100 | INFO     | intersect: 20309556099.839584
[2025-05-24 16:24:59] 2025-05-24 11:32:56,100 | INFO     | chi2: 1.0226112046808253
[2025-05-24 16:24:59] 2025-05-24 11:32:56,100 | INFO     | current chi2=1.0226112046808253 (change=1.80402601973086 %)
[2025-05-24 16:24:59] 2025-05-24 11:32:56,100 | INFO     | left removable region: 20
[2025-05-24 16:24:59] 2025-05-24 11:32:56,101 | INFO     | sum of square deviations: 5968658887.0
[2025-05-24 16:24:59] 2025-05-24 11:32:56,104 | INFO     | sum of deviations: -49168206400.50001
[2025-05-24 16:24:59] 2025-05-24 11:32:56,104 | INFO     | mean x: 1748077408.5
[2025-05-24 16:24:59] 2025-05-24 11:32:56,104 | INFO     | mean y: 2538144.0485074627
[2025-05-24 16:24:59] 2025-05-24 11:32:56,104 | INFO     | -- intersect: 14402729619.621296
[2025-05-24 16:24:59] 2025-05-24 11:32:56,104 | INFO     | intersect: 14402729619.621296
[2025-05-24 16:24:59] 2025-05-24 11:32:56,105 | INFO     | chi2: 0.2153766367768758
[2025-05-24 16:24:59] 2025-05-24 11:32:56,113 | INFO     | -- intersect: 14402729619.621296
[2025-05-24 16:24:59] 2025-05-24 11:32:56,113 | INFO     | current memory leak: -8.24 B/s (using 268 data points, chi2=0.22)
[2025-05-24 16:24:59] 2025-05-24 11:32:56,114 | INFO     | ..............................
[2025-05-24 16:24:59] 2025-05-24 11:32:56,114 | INFO     | . Timing measurements:
[2025-05-24 16:24:59] 2025-05-24 11:32:56,114 | INFO     | . get job = 0 s
[2025-05-24 16:24:59] 2025-05-24 11:32:56,114 | INFO     | . initial setup = 5 s
[2025-05-24 16:24:59] 2025-05-24 11:32:56,114 | INFO     | . payload setup = 142 s
[2025-05-24 16:24:59] 2025-05-24 11:32:56,114 | INFO     | . stage-in = 0 s
[2025-05-24 16:24:59] 2025-05-24 11:32:56,115 | INFO     | . payload execution = 18238 s
[2025-05-24 16:24:59] 2025-05-24 11:32:56,115 | INFO     | . stage-out = 3 s
[2025-05-24 16:24:59] 2025-05-24 11:32:56,115 | INFO     | . log creation = 1 s
[2025-05-24 16:24:59] 2025-05-24 11:32:56,115 | INFO     | ..............................
[2025-05-24 16:24:59] 2025-05-24 11:32:56,275 | INFO     | 
[2025-05-24 16:24:59] 2025-05-24 11:32:56,275 | INFO     | job summary report
[2025-05-24 16:24:59] 2025-05-24 11:32:56,275 | INFO     | --------------------------------------------------
[2025-05-24 16:24:59] 2025-05-24 11:32:56,275 | INFO     | PanDA job id: 6665207512
[2025-05-24 16:24:59] 2025-05-24 11:32:56,275 | INFO     | task id: 44871837
[2025-05-24 16:24:59] 2025-05-24 11:32:56,275 | INFO     | errors: (none)
[2025-05-24 16:24:59] 2025-05-24 11:32:56,275 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 16:24:59] 2025-05-24 11:32:56,276 | INFO     | pilot state: finished 
[2025-05-24 16:24:59] 2025-05-24 11:32:56,276 | INFO     | transexitcode: 0
[2025-05-24 16:24:59] 2025-05-24 11:32:56,276 | INFO     | exeerrorcode: 0
[2025-05-24 16:24:59] 2025-05-24 11:32:56,276 | INFO     | exeerrordiag: 
[2025-05-24 16:24:59] 2025-05-24 11:32:56,276 | INFO     | exitcode: 0
[2025-05-24 16:24:59] 2025-05-24 11:32:56,276 | INFO     | exitmsg: OK
[2025-05-24 16:24:59] 2025-05-24 11:32:56,276 | INFO     | cpuconsumptiontime: 69794 s
[2025-05-24 16:24:59] 2025-05-24 11:32:56,276 | INFO     | nevents: 400
[2025-05-24 16:24:59] 2025-05-24 11:32:56,276 | INFO     | neventsw: 0
[2025-05-24 16:24:59] 2025-05-24 11:32:56,276 | INFO     | pid: 29807
[2025-05-24 16:24:59] 2025-05-24 11:32:56,277 | INFO     | pgrp: 29807
[2025-05-24 16:24:59] 2025-05-24 11:32:56,277 | INFO     | corecount: 8
[2025-05-24 16:24:59] 2025-05-24 11:32:56,277 | INFO     | event service: False
[2025-05-24 16:24:59] 2025-05-24 11:32:56,277 | INFO     | sizes: {0: 2393510, 1: 2393765, 2: 2393793, 12: 2393793, 23: 2393821, 34: 2393849, 45: 2394005, 55: 2394033, 66: 2394061, 77: 2394089, 85: 2394351, 88: 2394659, 18
[2025-05-24 16:24:59] 2025-05-24 11:32:56,277 | INFO     | --------------------------------------------------
[2025-05-24 16:24:59] 2025-05-24 11:32:56,277 | INFO     | 
[2025-05-24 16:24:59] 2025-05-24 11:32:56,277 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-05-24 16:24:59] 2025-05-24 11:32:56,575 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 16:24:59] 2025-05-24 11:32:56,576 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 16:24:59] 2025-05-24 11:32:56,576 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 16:24:59] 2025-05-24 11:32:56,576 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 16:24:59] 2025-05-24 11:32:56,576 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 16:24:59] 2025-05-24 11:32:56,576 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 16:24:59] 2025-05-24 11:32:56,576 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 16:24:59] 2025-05-24 11:32:56,576 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 16:24:59] 2025-05-24 11:32:56,576 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 16:24:59] 2025-05-24 11:32:56,576 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 16:24:59] 2025-05-24 11:32:56,576 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 16:24:59] 2025-05-24 11:32:56,577 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 16:24:59] 2025-05-24 11:32:56,577 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 16:24:59] 2025-05-24 11:32:56,577 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 16:24:59] 2025-05-24 11:32:56,577 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 16:24:59] 2025-05-24 11:32:56,577 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 16:24:59] 2025-05-24 11:32:56,577 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 16:24:59] 2025-05-24 11:32:56,577 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 16:24:59] 2025-05-24 11:32:56,577 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 16:24:59] 2025-05-24 11:32:56,577 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 16:24:59] 2025-05-24 11:32:56,577 | INFO     | job 6665207512 has completed (purged errors)
[2025-05-24 16:24:59] 2025-05-24 11:32:56,578 | INFO     | overall cleanup function is called
[2025-05-24 16:24:59] 2025-05-24 11:32:57,587 | INFO     | --- collectZombieJob: --- 10, [29807]
[2025-05-24 16:24:59] 2025-05-24 11:32:57,587 | INFO     | zombie collector waiting for pid 29807
[2025-05-24 16:24:59] 2025-05-24 11:32:57,587 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 16:24:59] 2025-05-24 11:32:57,587 | INFO     | collected zombie processes
[2025-05-24 16:24:59] 2025-05-24 11:32:57,587 | INFO     | will attempt to kill all subprocesses of pid=29807
[2025-05-24 16:24:59] 2025-05-24 11:32:57,695 | INFO     | process IDs to be killed: [29807] (in reverse order)
[2025-05-24 16:24:59] 2025-05-24 11:32:58,006 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 16:24:59] 2025-05-24 11:32:58,006 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 16:24:59] 2025-05-24 11:32:58,009 | INFO     | did not find any defunct processes belonging to 29807
[2025-05-24 16:24:59] 2025-05-24 11:32:58,012 | INFO     | did not find any defunct processes belonging to 29807
[2025-05-24 16:24:59] 2025-05-24 11:32:58,013 | INFO     | ready for new job
[2025-05-24 16:24:59] 2025-05-24 11:32:58,013 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 16:24:59] 2025-05-24 11:32:58,015 | INFO     | **************************************
[2025-05-24 16:24:59] 2025-05-24 11:32:58,015 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 16:24:59] 2025-05-24 11:32:58,015 | INFO     | **************************************
[2025-05-24 16:24:59] 2025-05-24 11:32:58,015 | INFO     | 
[2025-05-24 16:24:59] 2025-05-24 11:32:58,016 | INFO     | pilot is running in a VM
[2025-05-24 16:24:59] 2025-05-24 11:32:58,016 | INFO     | architecture information:
[2025-05-24 16:24:59] 2025-05-24 11:32:58,021 | INFO     | executing command: cat /etc/os-release
[2025-05-24 16:24:59] 2025-05-24 11:32:58,160 | INFO     | cat /etc/os-release:
[2025-05-24 16:24:59] NAME="CentOS Linux"
[2025-05-24 16:24:59] VERSION="7 (Core)"
[2025-05-24 16:24:59] ID="centos"
[2025-05-24 16:24:59] ID_LIKE="rhel fedora"
[2025-05-24 16:24:59] VERSION_ID="7"
[2025-05-24 16:24:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 16:24:59] ANSI_COLOR="0;31"
[2025-05-24 16:24:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 16:24:59] HOME_URL="https://www.centos.org/"
[2025-05-24 16:24:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 16:24:59] 
[2025-05-24 16:24:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 16:24:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 16:24:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 16:24:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 16:24:59] 
[2025-05-24 16:24:59] 2025-05-24 11:32:58,161 | INFO     | **************************************
[2025-05-24 16:24:59] 2025-05-24 11:32:58,664 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-05-24 16:24:59] 2025-05-24 11:32:58,890 | INFO     | sufficient remaining disk space (494421409792 B)
[2025-05-24 16:24:59] 2025-05-24 11:32:58,890 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 16:24:59] 2025-05-24 11:32:58,890 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 16:24:59] 2025-05-24 11:32:58,890 | INFO     | update_server=False
[2025-05-24 16:24:59] 2025-05-24 11:32:58,890 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 16:24:59] 2025-05-24 11:32:58,892 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 16:24:59] 2025-05-24 11:32:58,892 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 16:24:59] 2025-05-24 11:32:58,892 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 16:24:59] 2025-05-24 11:32:58,892 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 16:24:59] 2025-05-24 11:32:58,980 | INFO     | all job control threads have been joined
[2025-05-24 16:24:59] 2025-05-24 11:32:59,219 | INFO     | all payload control threads have been joined
[2025-05-24 16:24:59] 2025-05-24 11:32:59,275 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 16:24:59] 2025-05-24 11:32:59,293 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 16:24:59] 2025-05-24 11:32:59,293 | INFO     | aborting loop
[2025-05-24 16:24:59] 2025-05-24 11:32:59,346 | INFO     | all data control threads have been joined
[2025-05-24 16:24:59] 2025-05-24 11:32:59,897 | INFO     | [job] retrieve thread has finished
[2025-05-24 16:24:59] 2025-05-24 11:32:59,986 | INFO     | [job] control thread has finished
[2025-05-24 16:24:59] 2025-05-24 11:33:00,225 | INFO     | [payload] control thread has finished
[2025-05-24 16:24:59] 2025-05-24 11:33:00,268 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 16:24:59] 2025-05-24 11:33:00,299 | INFO     | [job] job monitor thread has finished
[2025-05-24 16:24:59] 2025-05-24 11:33:00,345 | INFO     | [payload] failed_post thread has finished
[2025-05-24 16:24:59] 2025-05-24 11:33:00,352 | INFO     | [data] control thread has finished
[2025-05-24 16:24:59] 2025-05-24 11:33:00,373 | INFO     | [data] copytool_in thread has finished
[2025-05-24 16:24:59] 2025-05-24 11:33:00,384 | INFO     | [job] validate thread has finished
[2025-05-24 16:24:59] 2025-05-24 11:33:00,573 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 16:24:59] 2025-05-24 11:33:00,944 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 16:24:59] 2025-05-24 11:33:01,169 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 16:24:59] 2025-05-24 11:33:01,216 | INFO     | [payload] validate_post thread has finished
[2025-05-24 16:24:59] 2025-05-24 11:33:01,271 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 16:24:59] 2025-05-24 11:33:01,282 | INFO     | [data] copytool_out thread has finished
[2025-05-24 16:24:59] 2025-05-24 11:33:01,383 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 16:24:59] 2025-05-24 11:33:02,277 | INFO     | [job] queue monitor thread has finished
[2025-05-24 16:24:59] 2025-05-24 11:33:05,178 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 16:24:59] 2025-05-24 11:33:05,991 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139961986762560)>', '<ExcThread(monitor, started 139961038796544)>']
[2025-05-24 16:24:59] 2025-05-24 11:33:06,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 16:24:59] 2025-05-24 11:33:06,939 | INFO     | [monitor] control thread has ended
[2025-05-24 16:24:59] 2025-05-24 11:33:11,017 | INFO     | all workflow threads have been joined
[2025-05-24 16:24:59] 2025-05-24 11:33:11,017 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 16:24:59] 2025-05-24 11:33:11,017 | INFO     | traces error code: 0
[2025-05-24 16:24:59] 2025-05-24 11:33:11,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 16:24:59] 2025-05-24 11:33:11,188 [wrapper] ==== pilot stdout END ====
[2025-05-24 16:24:59] 2025-05-24 11:33:11,205 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 16:24:59] 2025-05-24 11:33:11,237 [wrapper] pilotpid: 23173
[2025-05-24 16:24:59] 2025-05-24 11:33:11,317 [wrapper] Pilot exit status: 0
[2025-05-24 16:24:59] 2025-05-24 11:33:11,744 [wrapper] pandaids: 6665207512
[2025-05-24 16:24:59] 2025-05-24 11:33:12,492 [wrapper] cleanup supervisor_pilot  6011 23174
[2025-05-24 16:24:59] 2025-05-24 11:33:12,547 [wrapper] Test setup, not cleaning
[2025-05-24 16:24:59] 2025-05-24 11:33:12,613 [wrapper] apfmon messages muted
[2025-05-24 16:24:59] 2025-05-24 11:33:12,695 [wrapper] ==== wrapper stdout END ====
[2025-05-24 16:24:59] 2025-05-24 11:33:12,811 [wrapper] ==== wrapper stderr END ====
[2025-05-24 16:24:59]  *** Error codes and diagnostics ***
[2025-05-24 16:24:59]     "exeErrorCode": 0,
[2025-05-24 16:24:59]     "exeErrorDiag": "",
[2025-05-24 16:24:59]     "pilotErrorCode": 0,
[2025-05-24 16:24:59]     "pilotErrorDiag": "",
[2025-05-24 16:24:59]  *** Listing of results directory ***
[2025-05-24 16:24:59] total 415148
[2025-05-24 16:24:59] -rw-r--r--. 1 boinc boinc    495897 May 24 07:01 pilot3.tar.gz
[2025-05-24 16:24:59] -rwx------. 1 boinc boinc     37140 May 24 07:05 runpilot2-wrapper.sh
[2025-05-24 16:24:59] -rw-r--r--. 1 boinc boinc      5111 May 24 07:05 queuedata.json
[2025-05-24 16:24:59] -rw-r--r--. 1 boinc boinc       100 May 24 08:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 16:24:59] -rwxr-xr-x. 1 boinc boinc      7986 May 24 08:11 run_atlas
[2025-05-24 16:24:59] -rw-r--r--. 1 boinc boinc       105 May 24 08:11 job.xml
[2025-05-24 16:24:59] -rw-r--r--. 2 boinc boinc    508873 May 24 08:11 input.tar.gz
[2025-05-24 16:24:59] -rw-r--r--. 1 boinc boinc      6372 May 24 08:11 init_data.xml
[2025-05-24 16:24:59] -rw-r--r--. 2 boinc boinc 223616742 May 24 08:11 EVNT.44871834._000161.pool.root.1
[2025-05-24 16:24:59] -rw-r--r--. 2 boinc boinc     15093 May 24 08:11 start_atlas.sh
[2025-05-24 16:24:59] drwxrwx--x. 2 boinc boinc        68 May 24 08:11 shared
[2025-05-24 16:24:59] -rw-r--r--. 1 boinc boinc         0 May 24 08:11 boinc_lockfile
[2025-05-24 16:24:59] -rw-r--r--. 1 boinc boinc      2557 May 24 08:18 pandaJob.out
[2025-05-24 16:24:59] -rw-------. 1 boinc boinc    988604 May 24 08:21 agis_schedconf.cvmfs.json
[2025-05-24 16:24:59] drwx------. 4 boinc boinc      4096 May 24 08:21 pilot3
[2025-05-24 16:24:59] -rw-------. 1 boinc boinc 193641959 May 24 13:29 HITS.44871837._004021.pool.root.1
[2025-05-24 16:24:59] -rw-r--r--. 1 boinc boinc       531 May 24 13:29 boinc_task_state.xml
[2025-05-24 16:24:59] -rw-------. 1 boinc boinc      1018 May 24 13:30 memory_monitor_summary.json
[2025-05-24 16:24:59] -rw-------. 1 boinc boinc   1596740 May 24 13:30 agis_ddmendpoints.agis.ALL.json
[2025-05-24 16:24:59] -rw-------. 1 boinc boinc    432922 May 24 13:30 log.44871837._004021.job.log.tgz.1
[2025-05-24 16:24:59] -rw-------. 1 boinc boinc        95 May 24 13:32 pilot_heartbeat.json
[2025-05-24 16:24:59] -rw-------. 1 boinc boinc      7687 May 24 13:32 heartbeat.json
[2025-05-24 16:24:59] -rw-------. 1 boinc boinc      4540 May 24 13:33 pilotlog.txt
[2025-05-24 16:24:59] -rw-------. 1 boinc boinc   1588038 May 24 13:33 log.44871837._004021.job.log.1
[2025-05-24 16:24:59] -rw-------. 1 boinc boinc       357 May 24 13:33 output.list
[2025-05-24 16:24:59] -rw-r--r--. 1 boinc boinc       620 May 24 13:33 runtime_log
[2025-05-24 16:24:59] -rw-------. 1 boinc boinc   2037760 May 24 13:33 result.tar.gz
[2025-05-24 16:24:59] -rw-r--r--. 1 boinc boinc      8673 May 24 13:33 runtime_log.err
[2025-05-24 16:24:59] -rw-------. 1 boinc boinc       657 May 24 13:33 2iOKDmVFwc7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoSPKDmCowXhn.diag
[2025-05-24 16:24:59] -rw-r--r--. 1 boinc boinc      8192 May 24 16:24 boinc_mmap_file
[2025-05-24 16:24:59] -rw-r--r--. 1 boinc boinc        28 May 24 16:24 wrapper_checkpoint.txt
[2025-05-24 16:24:59] -rw-r--r--. 1 boinc boinc     20508 May 24 16:24 stderr.txt
[2025-05-24 16:24:59] HITS file was successfully produced:
[2025-05-24 16:24:59] -rw-------. 1 boinc boinc 193641959 May 24 13:29 shared/HITS.pool.root.1
[2025-05-24 16:24:59]  *** Contents of shared directory: ***
[2025-05-24 16:24:59] total 409988
[2025-05-24 16:24:59] -rw-r--r--. 2 boinc boinc    508873 May 24 08:11 input.tar.gz
[2025-05-24 16:24:59] -rw-r--r--. 2 boinc boinc 223616742 May 24 08:11 ATLAS.root_0
[2025-05-24 16:24:59] -rw-r--r--. 2 boinc boinc     15093 May 24 08:11 start_atlas.sh
[2025-05-24 16:24:59] -rw-------. 1 boinc boinc 193641959 May 24 13:29 HITS.pool.root.1
[2025-05-24 16:24:59] -rw-------. 1 boinc boinc   2037760 May 24 13:33 result.tar.gz
16:25:01 (12857): run_atlas exited; CPU time 70045.327688
16:25:01 (12857): called boinc_finish(0)

</stderr_txt>
]]>

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