Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:57:58 (25698): wrapper (7.7.26015): starting
12:57:58 (25698): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 12:57:58] Arguments: --nthreads 8
[2025-05-24 12:57:58] Threads: 8
[2025-05-24 12:57:58] Checking for CVMFS
[2025-05-24 12:57:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 12:57:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 12:57:59] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 12:58:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 12:58:00] 2.11.2.0 23762 17459 84520 146364 0 240 22455962 25165824 3386 130560 0 8867628 99.703 12182534 1643 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-24 12:58:00] CVMFS is ok
[2025-05-24 12:58:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 12:58:01] Checking for apptainer binary...
[2025-05-24 12:58:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 12:58:01] Running /usr/bin/apptainer --version
[2025-05-24 12:58:01] apptainer version 1.3.2-1.el7
[2025-05-24 12:58:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 13:04:05] cg-vwn242.simple-grid.lan
[2025-05-24 13:04:05] apptainer works
[2025-05-24 13:04:05] Set ATHENA_PROC_NUMBER=8
[2025-05-24 13:04:05] Set ATHENA_CORE_NUMBER=8
[2025-05-24 13:04:05] Starting ATLAS job with PandaID=6665207275
[2025-05-24 13:04:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 19:06:09]  *** The last 200 lines of the pilot log: ***
[2025-05-24 19:06:09] 2025-05-24 16:39:32,952 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 19:06:09] 2025-05-24 16:39:32,953 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 19:06:09] 2025-05-24 16:39:32,953 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 19:06:09] 2025-05-24 16:39:32,959 | INFO     | fitting pss+swap vs Time
[2025-05-24 19:06:09] 2025-05-24 16:39:32,960 | INFO     | sum of square deviations: 9971385099.5
[2025-05-24 19:06:09] 2025-05-24 16:39:32,963 | INFO     | sum of deviations: 28000434018.499985
[2025-05-24 19:06:09] 2025-05-24 16:39:32,964 | INFO     | mean x: 1748094979.5
[2025-05-24 19:06:09] 2025-05-24 16:39:32,964 | INFO     | mean y: 2497246.5880503147
[2025-05-24 19:06:09] 2025-05-24 16:39:32,964 | INFO     | -- intersect: -4906291015.337089
[2025-05-24 19:06:09] 2025-05-24 16:39:32,964 | INFO     | intersect: -4906291015.337089
[2025-05-24 19:06:09] 2025-05-24 16:39:32,964 | INFO     | chi2: 5.817571272583667
[2025-05-24 19:06:09] 2025-05-24 16:39:32,965 | INFO     | sum of square deviations: 9508390372.0
[2025-05-24 19:06:09] 2025-05-24 16:39:32,969 | INFO     | sum of deviations: 48893956896.99999
[2025-05-24 19:06:09] 2025-05-24 16:39:32,969 | INFO     | mean x: 1748094827.0
[2025-05-24 19:06:09] 2025-05-24 16:39:32,969 | INFO     | mean y: 2504039.5399361025
[2025-05-24 19:06:09] 2025-05-24 16:39:32,969 | INFO     | -- intersect: -8986532987.683903
[2025-05-24 19:06:09] 2025-05-24 16:39:32,969 | INFO     | intersect: -8986532987.683903
[2025-05-24 19:06:09] 2025-05-24 16:39:32,970 | INFO     | chi2: 5.080581157721285
[2025-05-24 19:06:09] 2025-05-24 16:39:32,970 | INFO     | current chi2=5.080581157721285 (change=12.668346984171516 %)
[2025-05-24 19:06:09] 2025-05-24 16:39:32,970 | INFO     | right removable region: 312
[2025-05-24 19:06:09] 2025-05-24 16:39:32,971 | INFO     | sum of square deviations: 9508390372.0
[2025-05-24 19:06:09] 2025-05-24 16:39:32,974 | INFO     | sum of deviations: -78979341849.0
[2025-05-24 19:06:09] 2025-05-24 16:39:32,974 | INFO     | mean x: 1748095132.0
[2025-05-24 19:06:09] 2025-05-24 16:39:32,974 | INFO     | mean y: 2532439.661341853
[2025-05-24 19:06:09] 2025-05-24 16:39:32,974 | INFO     | -- intersect: 14522698063.210562
[2025-05-24 19:06:09] 2025-05-24 16:39:32,974 | INFO     | intersect: 14522698063.210562
[2025-05-24 19:06:09] 2025-05-24 16:39:32,975 | INFO     | chi2: 1.542275812373787
[2025-05-24 19:06:09] 2025-05-24 16:39:32,975 | INFO     | current chi2=1.542275812373787 (change=73.48935251310054 %)
[2025-05-24 19:06:09] 2025-05-24 16:39:32,975 | INFO     | sum of square deviations: 9059954057.0
[2025-05-24 19:06:09] 2025-05-24 16:39:32,979 | INFO     | sum of deviations: -106574561438.00003
[2025-05-24 19:06:09] 2025-05-24 16:39:32,979 | INFO     | mean x: 1748095284.5
[2025-05-24 19:06:09] 2025-05-24 16:39:32,979 | INFO     | mean y: 2541763.551948052
[2025-05-24 19:06:09] 2025-05-24 16:39:32,979 | INFO     | -- intersect: 20565834593.21926
[2025-05-24 19:06:09] 2025-05-24 16:39:32,979 | INFO     | intersect: 20565834593.21926
[2025-05-24 19:06:09] 2025-05-24 16:39:32,980 | INFO     | chi2: 1.0567335253463048
[2025-05-24 19:06:09] 2025-05-24 16:39:32,980 | INFO     | current chi2=1.0567335253463048 (change=31.482195540638212 %)
[2025-05-24 19:06:09] 2025-05-24 16:39:32,980 | INFO     | sum of square deviations: 8625843592.0
[2025-05-24 19:06:09] 2025-05-24 16:39:32,983 | INFO     | sum of deviations: -102505555035.0
[2025-05-24 19:06:09] 2025-05-24 16:39:32,984 | INFO     | mean x: 1748095437.0
[2025-05-24 19:06:09] 2025-05-24 16:39:32,984 | INFO     | mean y: 2540319.079207921
[2025-05-24 19:06:09] 2025-05-24 16:39:32,984 | INFO     | -- intersect: 20776101897.453335
[2025-05-24 19:06:09] 2025-05-24 16:39:32,984 | INFO     | intersect: 20776101897.453335
[2025-05-24 19:06:09] 2025-05-24 16:39:32,984 | INFO     | chi2: 1.0476334052072052
[2025-05-24 19:06:09] 2025-05-24 16:39:32,985 | INFO     | current chi2=1.0476334052072052 (change=0.8611556197308533 %)
[2025-05-24 19:06:09] 2025-05-24 16:39:32,985 | INFO     | left removable region: 30
[2025-05-24 19:06:09] 2025-05-24 16:39:32,985 | INFO     | sum of square deviations: 6953769450.5
[2025-05-24 19:06:09] 2025-05-24 16:39:32,988 | INFO     | sum of deviations: -52704017141.0
[2025-05-24 19:06:09] 2025-05-24 16:39:32,988 | INFO     | mean x: 1748095711.5
[2025-05-24 19:06:09] 2025-05-24 16:39:32,988 | INFO     | mean y: 2537459.418439716
[2025-05-24 19:06:09] 2025-05-24 16:39:32,988 | INFO     | -- intersect: 13251706417.181343
[2025-05-24 19:06:09] 2025-05-24 16:39:32,988 | INFO     | intersect: 13251706417.181343
[2025-05-24 19:06:09] 2025-05-24 16:39:32,989 | INFO     | chi2: 0.22275560652543883
[2025-05-24 19:06:09] 2025-05-24 16:39:32,989 | INFO     | -- intersect: 13251706417.181343
[2025-05-24 19:06:09] 2025-05-24 16:39:32,989 | INFO     | current memory leak: -7.58 B/s (using 282 data points, chi2=0.22)
[2025-05-24 19:06:09] 2025-05-24 16:39:32,990 | INFO     | ..............................
[2025-05-24 19:06:09] 2025-05-24 16:39:32,990 | INFO     | . Timing measurements:
[2025-05-24 19:06:09] 2025-05-24 16:39:32,990 | INFO     | . get job = 0 s
[2025-05-24 19:06:09] 2025-05-24 16:39:32,990 | INFO     | . initial setup = 5 s
[2025-05-24 19:06:09] 2025-05-24 16:39:32,990 | INFO     | . payload setup = 153 s
[2025-05-24 19:06:09] 2025-05-24 16:39:32,990 | INFO     | . stage-in = 0 s
[2025-05-24 19:06:09] 2025-05-24 16:39:32,990 | INFO     | . payload execution = 19538 s
[2025-05-24 19:06:09] 2025-05-24 16:39:32,990 | INFO     | . stage-out = 3 s
[2025-05-24 19:06:09] 2025-05-24 16:39:32,990 | INFO     | . log creation = 1 s
[2025-05-24 19:06:09] 2025-05-24 16:39:32,990 | INFO     | ..............................
[2025-05-24 19:06:09] 2025-05-24 16:39:33,115 | INFO     | 
[2025-05-24 19:06:09] 2025-05-24 16:39:33,115 | INFO     | job summary report
[2025-05-24 19:06:09] 2025-05-24 16:39:33,115 | INFO     | --------------------------------------------------
[2025-05-24 19:06:09] 2025-05-24 16:39:33,116 | INFO     | PanDA job id: 6665207275
[2025-05-24 19:06:09] 2025-05-24 16:39:33,116 | INFO     | task id: 44871837
[2025-05-24 19:06:09] 2025-05-24 16:39:33,116 | INFO     | errors: (none)
[2025-05-24 19:06:09] 2025-05-24 16:39:33,116 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 19:06:09] 2025-05-24 16:39:33,116 | INFO     | pilot state: finished 
[2025-05-24 19:06:09] 2025-05-24 16:39:33,116 | INFO     | transexitcode: 0
[2025-05-24 19:06:09] 2025-05-24 16:39:33,116 | INFO     | exeerrorcode: 0
[2025-05-24 19:06:09] 2025-05-24 16:39:33,116 | INFO     | exeerrordiag: 
[2025-05-24 19:06:09] 2025-05-24 16:39:33,116 | INFO     | exitcode: 0
[2025-05-24 19:06:09] 2025-05-24 16:39:33,116 | INFO     | exitmsg: OK
[2025-05-24 19:06:09] 2025-05-24 16:39:33,116 | INFO     | cpuconsumptiontime: 74369 s
[2025-05-24 19:06:09] 2025-05-24 16:39:33,116 | INFO     | nevents: 400
[2025-05-24 19:06:09] 2025-05-24 16:39:33,117 | INFO     | neventsw: 0
[2025-05-24 19:06:09] 2025-05-24 16:39:33,117 | INFO     | pid: 9671
[2025-05-24 19:06:09] 2025-05-24 16:39:33,117 | INFO     | pgrp: 9671
[2025-05-24 19:06:09] 2025-05-24 16:39:33,117 | INFO     | corecount: 8
[2025-05-24 19:06:09] 2025-05-24 16:39:33,117 | INFO     | event service: False
[2025-05-24 19:06:09] 2025-05-24 16:39:33,117 | INFO     | sizes: {0: 2392908, 1: 2393593, 2: 2393792, 12: 2393792, 23: 2393820, 34: 2393848, 45: 2394004, 55: 2394032, 66: 2394060, 77: 2394088, 80: 2394350, 87: 2394658, 19
[2025-05-24 19:06:09] 2025-05-24 16:39:33,117 | INFO     | --------------------------------------------------
[2025-05-24 19:06:09] 2025-05-24 16:39:33,117 | INFO     | 
[2025-05-24 19:06:09] 2025-05-24 16:39:33,117 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-05-24 19:06:09] 2025-05-24 16:39:33,519 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 19:06:09] 2025-05-24 16:39:33,519 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 19:06:09] 2025-05-24 16:39:33,519 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 19:06:09] 2025-05-24 16:39:33,519 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 19:06:09] 2025-05-24 16:39:33,519 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 19:06:09] 2025-05-24 16:39:33,520 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 19:06:09] 2025-05-24 16:39:33,520 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 19:06:09] 2025-05-24 16:39:33,520 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 19:06:09] 2025-05-24 16:39:33,520 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 19:06:09] 2025-05-24 16:39:33,520 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 19:06:09] 2025-05-24 16:39:33,520 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 19:06:09] 2025-05-24 16:39:33,520 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 19:06:09] 2025-05-24 16:39:33,520 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 19:06:09] 2025-05-24 16:39:33,520 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 19:06:09] 2025-05-24 16:39:33,521 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 19:06:09] 2025-05-24 16:39:33,521 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 19:06:09] 2025-05-24 16:39:33,521 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 19:06:09] 2025-05-24 16:39:33,521 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 19:06:09] 2025-05-24 16:39:33,521 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 19:06:09] 2025-05-24 16:39:33,521 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 19:06:09] 2025-05-24 16:39:33,521 | INFO     | job 6665207275 has completed (purged errors)
[2025-05-24 19:06:09] 2025-05-24 16:39:33,522 | INFO     | overall cleanup function is called
[2025-05-24 19:06:09] 2025-05-24 16:39:34,530 | INFO     | --- collectZombieJob: --- 10, [9671]
[2025-05-24 19:06:09] 2025-05-24 16:39:34,530 | INFO     | zombie collector waiting for pid 9671
[2025-05-24 19:06:09] 2025-05-24 16:39:34,530 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 19:06:09] 2025-05-24 16:39:34,531 | INFO     | collected zombie processes
[2025-05-24 19:06:09] 2025-05-24 16:39:34,531 | INFO     | will attempt to kill all subprocesses of pid=9671
[2025-05-24 19:06:09] 2025-05-24 16:39:34,681 | INFO     | process IDs to be killed: [9671] (in reverse order)
[2025-05-24 19:06:09] 2025-05-24 16:39:35,020 | INFO     | 19952s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-24 19:06:09] 2025-05-24 16:39:35,333 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 19:06:09] 2025-05-24 16:39:35,333 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 19:06:09] 2025-05-24 16:39:35,336 | INFO     | did not find any defunct processes belonging to 9671
[2025-05-24 19:06:09] 2025-05-24 16:39:35,339 | INFO     | did not find any defunct processes belonging to 9671
[2025-05-24 19:06:09] 2025-05-24 16:39:35,339 | INFO     | ready for new job
[2025-05-24 19:06:09] 2025-05-24 16:39:35,339 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 19:06:09] 2025-05-24 16:39:35,349 | INFO     | **************************************
[2025-05-24 19:06:09] 2025-05-24 16:39:35,350 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 19:06:09] 2025-05-24 16:39:35,350 | INFO     | **************************************
[2025-05-24 19:06:09] 2025-05-24 16:39:35,350 | INFO     | 
[2025-05-24 19:06:09] 2025-05-24 16:39:35,350 | INFO     | pilot is running in a VM
[2025-05-24 19:06:09] 2025-05-24 16:39:35,351 | INFO     | architecture information:
[2025-05-24 19:06:09] 2025-05-24 16:39:35,360 | INFO     | executing command: cat /etc/os-release
[2025-05-24 19:06:09] 2025-05-24 16:39:35,505 | INFO     | cat /etc/os-release:
[2025-05-24 19:06:09] NAME="CentOS Linux"
[2025-05-24 19:06:09] VERSION="7 (Core)"
[2025-05-24 19:06:09] ID="centos"
[2025-05-24 19:06:09] ID_LIKE="rhel fedora"
[2025-05-24 19:06:09] VERSION_ID="7"
[2025-05-24 19:06:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 19:06:09] ANSI_COLOR="0;31"
[2025-05-24 19:06:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 19:06:09] HOME_URL="https://www.centos.org/"
[2025-05-24 19:06:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 19:06:09] 
[2025-05-24 19:06:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 19:06:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 19:06:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 19:06:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 19:06:09] 
[2025-05-24 19:06:09] 2025-05-24 16:39:35,505 | INFO     | **************************************
[2025-05-24 19:06:09] 2025-05-24 16:39:36,008 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-05-24 19:06:09] 2025-05-24 16:39:36,211 | INFO     | sufficient remaining disk space (495379808256 B)
[2025-05-24 19:06:09] 2025-05-24 16:39:36,211 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 19:06:09] 2025-05-24 16:39:36,211 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 19:06:09] 2025-05-24 16:39:36,211 | INFO     | update_server=False
[2025-05-24 19:06:09] 2025-05-24 16:39:36,211 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 19:06:09] 2025-05-24 16:39:36,211 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 19:06:09] 2025-05-24 16:39:36,212 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 19:06:09] 2025-05-24 16:39:36,212 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 19:06:09] 2025-05-24 16:39:36,213 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 19:06:09] 2025-05-24 16:39:36,213 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 19:06:09] 2025-05-24 16:39:36,213 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 19:06:09] 2025-05-24 16:39:36,213 | INFO     | aborting loop
[2025-05-24 19:06:09] 2025-05-24 16:39:36,317 | INFO     | all payload control threads have been joined
[2025-05-24 19:06:09] 2025-05-24 16:39:36,481 | INFO     | all data control threads have been joined
[2025-05-24 19:06:09] 2025-05-24 16:39:37,217 | INFO     | [job] retrieve thread has finished
[2025-05-24 19:06:09] 2025-05-24 16:39:37,219 | INFO     | [job] job monitor thread has finished
[2025-05-24 19:06:09] 2025-05-24 16:39:37,262 | INFO     | all job control threads have been joined
[2025-05-24 19:06:09] 2025-05-24 16:39:37,323 | INFO     | [payload] control thread has finished
[2025-05-24 19:06:09] 2025-05-24 16:39:37,487 | INFO     | [data] control thread has finished
[2025-05-24 19:06:09] 2025-05-24 16:39:37,489 | INFO     | [payload] failed_post thread has finished
[2025-05-24 19:06:09] 2025-05-24 16:39:37,619 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 19:06:09] 2025-05-24 16:39:37,643 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 19:06:09] 2025-05-24 16:39:37,819 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 19:06:09] 2025-05-24 16:39:38,133 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 19:06:09] 2025-05-24 16:39:38,233 | INFO     | [payload] validate_post thread has finished
[2025-05-24 19:06:09] 2025-05-24 16:39:38,268 | INFO     | [job] control thread has finished
[2025-05-24 19:06:09] 2025-05-24 16:39:38,324 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 19:06:09] 2025-05-24 16:39:38,559 | INFO     | [job] validate thread has finished
[2025-05-24 19:06:09] 2025-05-24 16:39:38,701 | INFO     | [data] copytool_in thread has finished
[2025-05-24 19:06:09] 2025-05-24 16:39:39,139 | INFO     | [job] queue monitor thread has finished
[2025-05-24 19:06:09] 2025-05-24 16:39:39,650 | INFO     | [data] copytool_out thread has finished
[2025-05-24 19:06:09] 2025-05-24 16:39:40,222 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 19:06:09] 2025-05-24 16:39:46,949 | INFO     | job.realtimelogging is not enabled
[2025-05-24 19:06:09] 2025-05-24 16:39:47,955 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 19:06:09] 2025-05-24 16:39:49,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140189695145792)>', '<ExcThread(monitor, started 140189242472192)>']
[2025-05-24 19:06:09] 2025-05-24 16:39:50,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 19:06:09] 2025-05-24 16:39:50,298 | INFO     | [monitor] control thread has ended
[2025-05-24 19:06:09] 2025-05-24 16:39:54,968 | INFO     | all workflow threads have been joined
[2025-05-24 19:06:09] 2025-05-24 16:39:54,968 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 19:06:09] 2025-05-24 16:39:54,969 | INFO     | traces error code: 0
[2025-05-24 19:06:09] 2025-05-24 16:39:54,969 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 19:06:09] 2025-05-24 16:39:55,202 [wrapper] ==== pilot stdout END ====
[2025-05-24 19:06:09] 2025-05-24 16:39:55,295 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 19:06:09] 2025-05-24 16:39:55,386 [wrapper] pilotpid: 1023
[2025-05-24 19:06:09] 2025-05-24 16:39:55,437 [wrapper] Pilot exit status: 0
[2025-05-24 19:06:09] 2025-05-24 16:39:55,833 [wrapper] pandaids: 6665207275
[2025-05-24 19:06:09] 2025-05-24 16:39:56,795 [wrapper] cleanup supervisor_pilot 22781 1024
[2025-05-24 19:06:09] 2025-05-24 16:39:56,829 [wrapper] Test setup, not cleaning
[2025-05-24 19:06:09] 2025-05-24 16:39:56,878 [wrapper] apfmon messages muted
[2025-05-24 19:06:09] 2025-05-24 16:39:56,944 [wrapper] ==== wrapper stdout END ====
[2025-05-24 19:06:09] 2025-05-24 16:39:57,000 [wrapper] ==== wrapper stderr END ====
[2025-05-24 19:06:09]  *** Error codes and diagnostics ***
[2025-05-24 19:06:09]     "exeErrorCode": 0,
[2025-05-24 19:06:09]     "exeErrorDiag": "",
[2025-05-24 19:06:09]     "pilotErrorCode": 0,
[2025-05-24 19:06:09]     "pilotErrorDiag": "",
[2025-05-24 19:06:09]  *** Listing of results directory ***
[2025-05-24 19:06:09] total 421276
[2025-05-24 19:06:09] -rwx------. 1 boinc boinc     37140 May 24 07:01 runpilot2-wrapper.sh
[2025-05-24 19:06:09] -rw-r--r--. 1 boinc boinc    495897 May 24 07:01 pilot3.tar.gz
[2025-05-24 19:06:09] -rw-r--r--. 1 boinc boinc      5111 May 24 07:02 queuedata.json
[2025-05-24 19:06:09] -rw-r--r--. 1 boinc boinc       100 May 24 12:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 19:06:09] -rwxr-xr-x. 1 boinc boinc      7986 May 24 12:57 run_atlas
[2025-05-24 19:06:09] -rw-r--r--. 1 boinc boinc       105 May 24 12:57 job.xml
[2025-05-24 19:06:09] -rw-r--r--. 1 boinc boinc      6371 May 24 12:57 init_data.xml
[2025-05-24 19:06:09] -rw-r--r--. 2 boinc boinc 223582387 May 24 12:57 EVNT.44871834._000152.pool.root.1
[2025-05-24 19:06:09] -rw-r--r--. 2 boinc boinc     15093 May 24 12:57 start_atlas.sh
[2025-05-24 19:06:09] drwxrwx--x. 2 boinc boinc        68 May 24 12:57 shared
[2025-05-24 19:06:09] -rw-r--r--. 2 boinc boinc    508863 May 24 12:57 input.tar.gz
[2025-05-24 19:06:09] -rw-r--r--. 1 boinc boinc         0 May 24 12:57 boinc_lockfile
[2025-05-24 19:06:09] -rw-r--r--. 1 boinc boinc      2557 May 24 13:04 pandaJob.out
[2025-05-24 19:06:09] -rw-------. 1 boinc boinc    988564 May 24 13:07 agis_schedconf.cvmfs.json
[2025-05-24 19:06:09] drwx------. 4 boinc boinc      4096 May 24 13:07 pilot3
[2025-05-24 19:06:09] -rw-------. 1 boinc boinc 199765957 May 24 18:37 HITS.44871837._003784.pool.root.1
[2025-05-24 19:06:09] -rw-r--r--. 1 boinc boinc       531 May 24 18:37 boinc_task_state.xml
[2025-05-24 19:06:09] -rw-------. 1 boinc boinc      1015 May 24 18:38 memory_monitor_summary.json
[2025-05-24 19:06:09] -rw-------. 1 boinc boinc   1596740 May 24 18:38 agis_ddmendpoints.agis.ALL.json
[2025-05-24 19:06:09] -rw-------. 1 boinc boinc    430540 May 24 18:38 log.44871837._003784.job.log.tgz.1
[2025-05-24 19:06:09] -rw-------. 1 boinc boinc        95 May 24 18:39 pilot_heartbeat.json
[2025-05-24 19:06:09] -rw-------. 1 boinc boinc      7686 May 24 18:39 heartbeat.json
[2025-05-24 19:06:09] -rw-------. 1 boinc boinc      4611 May 24 18:39 pilotlog.txt
[2025-05-24 19:06:09] -rw-------. 1 boinc boinc   1678961 May 24 18:39 log.44871837._003784.job.log.1
[2025-05-24 19:06:09] -rw-------. 1 boinc boinc       357 May 24 18:39 output.list
[2025-05-24 19:06:09] -rw-r--r--. 1 boinc boinc       620 May 24 18:39 runtime_log
[2025-05-24 19:06:09] -rw-------. 1 boinc boinc   2129920 May 24 18:39 result.tar.gz
[2025-05-24 19:06:09] -rw-------. 1 boinc boinc       657 May 24 18:39 UqaKDmNCwc7n9Rq4apOajLDm4fhM0noT9bVof3QYDm29KKDm5Lw1zm.diag
[2025-05-24 19:06:09] -rw-r--r--. 1 boinc boinc      8659 May 24 18:39 runtime_log.err
[2025-05-24 19:06:09] -rw-r--r--. 1 boinc boinc      8192 May 24 19:06 boinc_mmap_file
[2025-05-24 19:06:09] -rw-r--r--. 1 boinc boinc        28 May 24 19:06 wrapper_checkpoint.txt
[2025-05-24 19:06:09] -rw-r--r--. 1 boinc boinc     20525 May 24 19:06 stderr.txt
[2025-05-24 19:06:09] HITS file was successfully produced:
[2025-05-24 19:06:09] -rw-------. 1 boinc boinc 199765957 May 24 18:37 shared/HITS.pool.root.1
[2025-05-24 19:06:09]  *** Contents of shared directory: ***
[2025-05-24 19:06:09] total 416024
[2025-05-24 19:06:09] -rw-r--r--. 2 boinc boinc 223582387 May 24 12:57 ATLAS.root_0
[2025-05-24 19:06:09] -rw-r--r--. 2 boinc boinc     15093 May 24 12:57 start_atlas.sh
[2025-05-24 19:06:09] -rw-r--r--. 2 boinc boinc    508863 May 24 12:57 input.tar.gz
[2025-05-24 19:06:09] -rw-------. 1 boinc boinc 199765957 May 24 18:37 HITS.pool.root.1
[2025-05-24 19:06:09] -rw-------. 1 boinc boinc   2129920 May 24 18:39 result.tar.gz
19:06:11 (25698): run_atlas exited; CPU time 74645.251510
19:06:11 (25698): called boinc_finish(0)

</stderr_txt>
]]>

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