Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-24 04:33:42 (30648): Detected: vboxwrapper 26206
2025-05-24 04:33:42 (30648): Detected: BOINC client v8.0.2
2025-05-24 04:33:43 (30648): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-05-24 04:33:43 (30648): Successfully copied 'init_data.xml' to the shared directory.
2025-05-24 04:33:44 (30648): Create VM. (boinc_5d8aecd0c810e5fb, slot#9)
2025-05-24 04:33:44 (30648): Setting Memory Size for VM. (4800MB)
2025-05-24 04:33:45 (30648): Setting CPU Count for VM. (8)
2025-05-24 04:33:45 (30648): Setting Chipset Options for VM.
2025-05-24 04:33:45 (30648): Setting Graphics Controller Options for VM.
2025-05-24 04:33:45 (30648): Setting Boot Options for VM.
2025-05-24 04:33:46 (30648): Setting Network Configuration for NAT.
2025-05-24 04:33:46 (30648): Enabling VM Network Access.
2025-05-24 04:33:46 (30648): Disabling USB Support for VM.
2025-05-24 04:33:46 (30648): Disabling COM Port Support for VM.
2025-05-24 04:33:47 (30648): Disabling LPT Port Support for VM.
2025-05-24 04:33:47 (30648): Disabling Audio Support for VM.
2025-05-24 04:33:47 (30648): Disabling Clipboard Support for VM.
2025-05-24 04:33:48 (30648): Disabling Drag and Drop Support for VM.
2025-05-24 04:33:48 (30648): Adding storage controller(s) to VM.
2025-05-24 04:33:48 (30648): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-24 04:33:51 (30648): Adding VirtualBox Guest Additions to VM.
2025-05-24 04:33:51 (30648): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-24 04:33:51 (30648): forwarding host port 63788 to guest port 80
2025-05-24 04:33:52 (30648): Enabling remote desktop for VM.
2025-05-24 04:33:52 (30648): Required extension pack not installed, remote desktop not enabled.
2025-05-24 04:33:52 (30648): Enabling shared directory for VM.
2025-05-24 04:33:53 (30648): Starting VM using VBoxManage interface. (boinc_5d8aecd0c810e5fb, slot#9)
2025-05-24 04:34:00 (30648): Successfully started VM. (PID = '21704')
2025-05-24 04:34:00 (30648): Reporting VM Process ID to BOINC.
2025-05-24 04:34:00 (30648): Guest Log: BIOS: VirtualBox 7.0.6
2025-05-24 04:34:00 (30648): Guest Log: CPUID EDX: 0x178bfbff
2025-05-24 04:34:00 (30648): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-24 04:34:00 (30648): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-24 04:34:00 (30648): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-24 04:34:00 (30648): Detected: Web Application Enabled (http://localhost:63788)
2025-05-24 04:34:00 (30648): Preference change detected
2025-05-24 04:34:00 (30648): Setting CPU throttle for VM. (100%)
2025-05-24 04:34:00 (30648): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-24 04:34:02 (30648): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-24 04:34:02 (30648): Guest Log: BIOS: Booting from Hard Disk...
2025-05-24 04:34:05 (30648): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-24 04:34:05 (30648): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-24 04:34:05 (30648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-24 04:34:13 (30648): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-24 04:34:13 (30648): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-24 04:34:19 (30648): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-24 04:34:19 (30648): Guest Log: 00:00:00.000138 main     Log opened 2025-05-24T04:34:18.268476000Z
2025-05-24 04:34:19 (30648): Guest Log: 00:00:00.000257 main     OS Product: Linux
2025-05-24 04:34:19 (30648): Guest Log: 00:00:00.000303 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-24 04:34:19 (30648): Guest Log: 00:00:00.000342 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-24 04:34:19 (30648): Guest Log: 00:00:00.000381 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-24 04:34:19 (30648): Guest Log: 00:00:00.000381 main     Process ID: 1365
2025-05-24 04:34:19 (30648): Guest Log: 00:00:00.000382 main     Package type: LINUX_64BITS_GENERIC
2025-05-24 04:34:19 (30648): Guest Log: 00:00:00.002342 main     5.2.32 r132073 started. Verbose level = 0
2025-05-24 04:34:20 (30648): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-24 04:34:20 (30648): Guest Log: [INFO] Mounting shared directory
2025-05-24 04:34:20 (30648): Guest Log: [INFO] Checking for init_data.xml
2025-05-24 04:34:27 (30648): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-24 04:34:27 (30648): Guest Log: [INFO] Detected branch: prod
2025-05-24 04:34:28 (30648): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-24 04:34:28 (30648): Guest Log: Copying input files
2025-05-24 04:34:29 (30648): Guest Log: Copied input files into RunAtlas.
2025-05-24 04:34:29 (30648): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-24 04:34:29 (30648): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-24 04:34:29 (30648): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-24 04:34:29 (30648): Guest Log: Further information can be found at the LHC@home message board.
2025-05-24 04:34:29 (30648): Guest Log: 00:00:10.009811 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 112 179 000ns (GuestNow=1 748 075 669 384 649 000 ns GuestLast=1 748 061 258 272 470 000 ns fSetTimeLastLoop=true )
2025-05-24 04:35:24 (30648): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-24 04:35:25 (30648): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-24 04:35:25 (30648): Guest Log: 2.6.3.0 1647 1 30152 146360 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-24 04:35:26 (30648): Guest Log: copied the webapp to /var/www
2025-05-24 04:35:26 (30648): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-24 04:35:26 (30648): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-24 04:35:26 (30648): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-24 04:35:26 (30648): Guest Log:  *** Starting ATLAS job. (PandaID=6665147920 taskID=44871837) ***
2025-05-24 06:14:12 (30648): Status Report: Elapsed Time: '6000.000000'
2025-05-24 06:14:12 (30648): Status Report: CPU Time: '39328.625000'
2025-05-24 07:54:25 (30648): Status Report: Elapsed Time: '12000.000000'
2025-05-24 07:54:25 (30648): Status Report: CPU Time: '85367.375000'
2025-05-24 08:11:12 (30648): Guest Log:  *** Job finished ***
2025-05-24 08:11:12 (30648): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-24 08:11:12 (30648): Guest Log: 2025-05-24 12:10:57,500 | INFO     | [job] control thread has finished
2025-05-24 08:11:12 (30648): Guest Log: 2025-05-24 12:10:58,625 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-05-24 08:11:12 (30648): Guest Log: 2025-05-24 12:11:02,788 | INFO     | [data] queue_monitor thread has finished
2025-05-24 08:11:12 (30648): Guest Log: 2025-05-24 12:11:03,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140640919983936)>', '<ExcThread(monitor, started 140639937210112)>']
2025-05-24 08:11:12 (30648): Guest Log: 2025-05-24 12:11:04,425 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-24 08:11:12 (30648): Guest Log: 2025-05-24 12:11:04,425 | INFO     | [monitor] control thread has ended
2025-05-24 08:11:12 (30648): Guest Log: 2025-05-24 12:11:08,973 | INFO     | all workflow threads have been joined
2025-05-24 08:11:12 (30648): Guest Log: 2025-05-24 12:11:08,973 | INFO     | end of generic workflow (traces error code: 0)
2025-05-24 08:11:12 (30648): Guest Log: 2025-05-24 12:11:08,973 | INFO     | traces error code: 0
2025-05-24 08:11:12 (30648): Guest Log: 2025-05-24 12:11:08,973 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-24 08:11:12 (30648): Guest Log: 2025-05-24 12:11:09,050 [wrapper] ==== pilot stdout END ====
2025-05-24 08:11:12 (30648): Guest Log: 2025-05-24 12:11:09,055 [wrapper] ==== wrapper stdout RESUME ====
2025-05-24 08:11:12 (30648): Guest Log: 2025-05-24 12:11:09,061 [wrapper] pilotpid: 6043
2025-05-24 08:11:12 (30648): Guest Log: 2025-05-24 12:11:09,066 [wrapper] Pilot exit status: 0
2025-05-24 08:11:12 (30648): Guest Log: 2025-05-24 12:11:09,189 [wrapper] pandaids: 6665147920
2025-05-24 08:11:12 (30648): Guest Log: 2025-05-24 12:11:09,233 [wrapper] cleanup supervisor_pilot 13454 6044
2025-05-24 08:11:12 (30648): Guest Log: 2025-05-24 12:11:09,240 [wrapper] Test setup, not cleaning
2025-05-24 08:11:12 (30648): Guest Log: 2025-05-24 12:11:09,246 [wrapper] apfmon messages muted
2025-05-24 08:11:12 (30648): Guest Log: 2025-05-24 12:11:09,252 [wrapper] ==== wrapper stdout END ====
2025-05-24 08:11:12 (30648): Guest Log: 2025-05-24 12:11:09,257 [wrapper] ==== wrapper stderr END ====
2025-05-24 08:11:12 (30648): Guest Log:  *** Error codes and diagnostics ***
2025-05-24 08:11:12 (30648): Guest Log:     "exeErrorCode": 0,
2025-05-24 08:11:12 (30648): Guest Log:     "exeErrorDiag": "",
2025-05-24 08:11:12 (30648): Guest Log:     "pilotErrorCode": 0,
2025-05-24 08:11:12 (30648): Guest Log:     "pilotErrorDiag": "",
2025-05-24 08:11:12 (30648): Guest Log:  *** Listing of results directory ***
2025-05-24 08:11:12 (30648): Guest Log: total 198464
2025-05-24 08:11:12 (30648): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 24 02:59 pilot3.tar.gz
2025-05-24 08:11:12 (30648): Guest Log: -rwx------. 1 atlas atlas     37140 May 24 04:05 runpilot2-wrapper.sh
2025-05-24 08:11:12 (30648): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 24 04:06 queuedata.json
2025-05-24 08:11:12 (30648): Guest Log: -rwxr-xr-x. 1 atlas atlas     11734 May 24 08:34 init_data.xml
2025-05-24 08:11:12 (30648): Guest Log: -rwxr-xr-x. 1 atlas atlas    508875 May 24 08:34 input.tar.gz
2025-05-24 08:11:12 (30648): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 24 08:34 start_atlas.sh
2025-05-24 08:11:12 (30648): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 24 08:34 EVNT.44871834._000075.pool.root.1 -> /data/./ATLAS.root_0
2025-05-24 08:11:12 (30648): Guest Log: -rw-r--r--. 1 atlas atlas      2556 May 24 08:35 pandaJob.out
2025-05-24 08:11:12 (30648): Guest Log: -rw-------. 1 atlas atlas    988612 May 24 08:39 agis_schedconf.cvmfs.json
2025-05-24 08:11:12 (30648): Guest Log: drwx------. 4 atlas atlas      4096 May 24 08:39 pilot3
2025-05-24 08:11:12 (30648): Guest Log: -rw-------. 1 atlas atlas 196649205 May 24 12:10 HITS.44871837._001871.pool.root.1
2025-05-24 08:11:12 (30648): Guest Log: -rw-------. 1 atlas atlas      1033 May 24 12:10 memory_monitor_summary.json
2025-05-24 08:11:12 (30648): Guest Log: -rw-------. 1 atlas atlas        95 May 24 12:10 pilot_heartbeat.json
2025-05-24 08:11:12 (30648): Guest Log: -rw-------. 1 atlas atlas   1596740 May 24 12:10 agis_ddmendpoints.agis.ALL.json
2025-05-24 08:11:12 (30648): Guest Log: -rw-------. 1 atlas atlas    378343 May 24 12:10 log.44871837._001871.job.log.tgz.1
2025-05-24 08:11:12 (30648): Guest Log: -rw-------. 1 atlas atlas      7734 May 24 12:10 heartbeat.json
2025-05-24 08:11:12 (30648): Guest Log: -rw-------. 1 atlas atlas      4536 May 24 12:11 pilotlog.txt
2025-05-24 08:11:12 (30648): Guest Log: -rw-------. 1 atlas atlas   1025354 May 24 12:11 log.44871837._001871.job.log.1
2025-05-24 08:11:12 (30648): Guest Log: -rw-------. 1 atlas atlas       357 May 24 12:11 output.list
2025-05-24 08:11:12 (30648): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 24 12:11 runtime_log
2025-05-24 08:11:12 (30648): Guest Log: -rw-------. 1 atlas atlas   1423360 May 24 12:11 result.tar.gz
2025-05-24 08:11:12 (30648): Guest Log: -rw-------. 1 atlas atlas       664 May 24 12:11 uXNLDmgJvc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmh0KKDmiYfCZm.diag
2025-05-24 08:11:12 (30648): Guest Log: -rw-r--r--. 1 atlas atlas      8614 May 24 12:11 runtime_log.err
2025-05-24 08:11:12 (30648): Guest Log: Looking for outputfile HITS.44871837._001871.pool.root.1
2025-05-24 08:11:12 (30648): Guest Log: HITS file was successfully produced
2025-05-24 08:11:12 (30648): Guest Log: -rw-------. 1 atlas atlas 196649205 May 24 12:10 /home/atlas/RunAtlas/HITS.44871837._001871.pool.root.1
2025-05-24 08:11:13 (30648): Guest Log: Successfully finished the ATLAS job!
2025-05-24 08:11:13 (30648): Guest Log: Copying the results back to the shared directory!
2025-05-24 08:11:13 (30648): Guest Log:  *** Contents of shared directory: ***
2025-05-24 08:11:13 (30648): Guest Log: total 413160
2025-05-24 08:11:13 (30648): Guest Log: -rwxrwxrwx. 1 root root 224455272 May 24 08:33 ATLAS.root_0
2025-05-24 08:11:13 (30648): Guest Log: -rwxrwxrwx. 1 root root 196649205 May 24 12:11 HITS.pool.root.1
2025-05-24 08:11:13 (30648): Guest Log: -rwxrwxrwx. 1 root root     11734 May 24 08:33 init_data.xml
2025-05-24 08:11:13 (30648): Guest Log: -rwxrwxrwx. 1 root root    508875 May 24 04:17 input.tar.gz
2025-05-24 08:11:13 (30648): Guest Log: -rwxrwxrwx. 1 root root   1423360 May 24 12:11 result.tar.gz
2025-05-24 08:11:13 (30648): Guest Log: -rwxrwxrwx. 1 root root     15093 May 24 04:17 start_atlas.sh
2025-05-24 08:11:13 (30648): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-24 08:11:13 (30648): VM Completion File Detected.
2025-05-24 08:11:13 (30648): Powering off VM.
2025-05-24 08:11:14 (30648): Successfully stopped VM.
2025-05-24 08:11:14 (30648): Deregistering VM. (boinc_5d8aecd0c810e5fb, slot#9)
2025-05-24 08:11:14 (30648): Removing network bandwidth throttle group from VM.
2025-05-24 08:11:14 (30648): Removing VM from VirtualBox.
08:11:20 (30648): called boinc_finish(0)

</stderr_txt>
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